Gallus gallus isolate bGalGal1 chromosome 38, bGalGal1.mat.broiler.GRCg7b, whole genome shotgun sequence.
type: Entry
definition: Gallus gallus isolate bGalGal1 chromosome 38, bGalGal1.mat.broiler.GRCg7b, whole genome shotgun sequence.
sequence version: NC_052569.1
sequence date: 2022-03-01
sequence: sequence
division: CON
label: NC_052569.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA698609
dblink: SAMN15960293
keyword: WGS
keyword: RefSeq
source: Gallus gallus (chicken)
organism: Gallus gallus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM028519.1.\nAssembly name: bGalGal1.mat.broiler.GRCg7b\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/01/19. The original whole-genome shotgun project has the\naccession JAENSK000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 22-JUL-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n SMRTLink7.0.1; Freebayes v. 1.3.1; gEVAL\n manual curation v. 2020-07-22; VGP trio\n assembly pipeline v. 1.6\nAssembly Name :: bGalGal1.mat.broiler.GRCg7b\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 102.01x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Gallus gallus Annotation Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 667312
topology: linear
so has quality: SO_0000987
location: 1..667312
location: region:1-667312:1
RO_0002162: 9031

NC_052569
type: RefSeq
SIO_000068: refseq

PRJNA698609
type: BioProject
SIO_000068: bioproject

SAMN15960293
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667312:1
position: 667312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-667312:1:source
so part of: sequence
organism: Gallus gallus
mol type: genomic DNA
isolate: bGalGal1
chromosome: 38
sex: female
tissue type: blood
country: USA: Fayetteville
lat lon: 36.0822 N 94.1719 W
collection date: 20-May-2019
collected by: Nick Anthony

9031
type: Taxonomy
SIO_000068: taxonomy

SUPT5H
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SUPT5H
note: SPT5 homolog, DSIF elongation factor subunit; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<1..7466)
location: region:1-7466:-1
so has part: feature:1-7466:-1:exon
subclass of: SO_0000010

426493
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:7466:-1
position: 7466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-7466:-1:exon

SUPT5H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SUPT5H
product: SPT5 homolog, DSIF elongation factor subunit
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001031384.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions and aligns at 95% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001031384.2
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(<1..92,317..412,500..703,777..945,1143..1301,1519..1624,1848..1975,2070..2172,2272..2376,2465..2549,2651..2776,3004..3150,3360..3506,3619..3774,3887..4023,4103..4196,4420..4525,4621..4691,4765..4854,4930..5181,5267..5335,5420..5450,5613..5678,5768..5836,5936..6005,6126..6137,6736..6801,6885..7035,7124..7466))
location: region:1-7466:-1
so has part: feature:7124-7466:-1:exon
so has part: feature:6885-7035:-1:exon
so has part: feature:6736-6801:-1:exon
so has part: feature:6126-6137:-1:exon
so has part: feature:5936-6005:-1:exon
so has part: feature:5768-5836:-1:exon
so has part: feature:5613-5678:-1:exon
so has part: feature:5420-5450:-1:exon
so has part: feature:5267-5335:-1:exon
so has part: feature:4930-5181:-1:exon
so has part: feature:4765-4854:-1:exon
so has part: feature:4621-4691:-1:exon
so has part: feature:4420-4525:-1:exon
so has part: feature:4103-4196:-1:exon
so has part: feature:3887-4023:-1:exon
so has part: feature:3619-3774:-1:exon
so has part: feature:3360-3506:-1:exon
so has part: feature:3004-3150:-1:exon
so has part: feature:2651-2776:-1:exon
so has part: feature:2465-2549:-1:exon
so has part: feature:2272-2376:-1:exon
so has part: feature:2070-2172:-1:exon
so has part: feature:1848-1975:-1:exon
so has part: feature:1519-1624:-1:exon
so has part: feature:1143-1301:-1:exon
so has part: feature:777-945:-1:exon
so has part: feature:500-703:-1:exon
so has part: feature:317-412:-1:exon
so has part: feature:1-92:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7124-7466:-1:exon

position:7124:-1
position: 7124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6885-7035:-1:exon

position:6885:-1
position: 6885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7035:-1
position: 7035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6736-6801:-1:exon

position:6736:-1
position: 6736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6801:-1
position: 6801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6126-6137:-1:exon

position:6126:-1
position: 6126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6137:-1
position: 6137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5936-6005:-1:exon

position:5936:-1
position: 5936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6005:-1
position: 6005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5768-5836:-1:exon

position:5768:-1
position: 5768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5836:-1
position: 5836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5613-5678:-1:exon

position:5613:-1
position: 5613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5678:-1
position: 5678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5420-5450:-1:exon

position:5420:-1
position: 5420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5450:-1
position: 5450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5267-5335:-1:exon

position:5267:-1
position: 5267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5335:-1
position: 5335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4930-5181:-1:exon

position:4930:-1
position: 4930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5181:-1
position: 5181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4765-4854:-1:exon

position:4765:-1
position: 4765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4854:-1
position: 4854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4621-4691:-1:exon

position:4621:-1
position: 4621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4691:-1
position: 4691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4420-4525:-1:exon

position:4420:-1
position: 4420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4525:-1
position: 4525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4103-4196:-1:exon

position:4103:-1
position: 4103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4196:-1
position: 4196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3887-4023:-1:exon

position:3887:-1
position: 3887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023:-1
position: 4023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3619-3774:-1:exon

position:3619:-1
position: 3619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3774:-1
position: 3774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3360-3506:-1:exon

position:3360:-1
position: 3360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3506:-1
position: 3506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3004-3150:-1:exon

position:3004:-1
position: 3004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3150:-1
position: 3150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2651-2776:-1:exon

position:2651:-1
position: 2651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2776:-1
position: 2776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2465-2549:-1:exon

position:2465:-1
position: 2465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549:-1
position: 2549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2272-2376:-1:exon

position:2272:-1
position: 2272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376:-1
position: 2376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2070-2172:-1:exon

position:2070:-1
position: 2070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2172:-1
position: 2172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1848-1975:-1:exon

position:1848:-1
position: 1848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975:-1
position: 1975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1519-1624:-1:exon

position:1519:-1
position: 1519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1624:-1
position: 1624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1143-1301:-1:exon

position:1143:-1
position: 1143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301:-1
position: 1301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:777-945:-1:exon

position:777:-1
position: 777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945:-1
position: 945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:500-703:-1:exon

position:500:-1
position: 500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703:-1
position: 703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:317-412:-1:exon

position:317:-1
position: 317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412:-1
position: 412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1-92:-1:exon

position:92:-1
position: 92
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT5H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SUPT5H
inference: similar to AA sequence (same species):RefSeq:NP_001026555.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein aligns at 98% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: transcription elongation factor SPT5
translation: MSDSDDSNFSEEESEHSSEAEEAEEAEAEEERASAAGSEKEEVEEEEEEEYDEEEEEEDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGSFAPMSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQGYGGTPNPQTPGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(<1..92,317..412,500..703,777..945,1143..1301,1519..1624,1848..1975,2070..2172,2272..2376,2465..2549,2651..2776,3004..3150,3360..3506,3619..3774,3887..4023,4103..4196,4420..4525,4621..4691,4765..4854,4930..5181,5267..5335,5420..5450,5613..5678,5768..5836,5936..6005,6126..6137,6736..6801,6885..7035,7124..7204))
location: region:1-7204:-1
so has part: feature:7124-7204:-1:exon
so has part: feature:6885-7035:-1:exon
so has part: feature:6736-6801:-1:exon
so has part: feature:6126-6137:-1:exon
so has part: feature:5936-6005:-1:exon
so has part: feature:5768-5836:-1:exon
so has part: feature:5613-5678:-1:exon
so has part: feature:5420-5450:-1:exon
so has part: feature:5267-5335:-1:exon
so has part: feature:4930-5181:-1:exon
so has part: feature:4765-4854:-1:exon
so has part: feature:4621-4691:-1:exon
so has part: feature:4420-4525:-1:exon
so has part: feature:4103-4196:-1:exon
so has part: feature:3887-4023:-1:exon
so has part: feature:3619-3774:-1:exon
so has part: feature:3360-3506:-1:exon
so has part: feature:3004-3150:-1:exon
so has part: feature:2651-2776:-1:exon
so has part: feature:2465-2549:-1:exon
so has part: feature:2272-2376:-1:exon
so has part: feature:2070-2172:-1:exon
so has part: feature:1848-1975:-1:exon
so has part: feature:1519-1624:-1:exon
so has part: feature:1143-1301:-1:exon
so has part: feature:777-945:-1:exon
so has part: feature:500-703:-1:exon
so has part: feature:317-412:-1:exon
so has part: feature:1-92:-1:exon

NP_001026555.1
type: Protein
SIO_000068: ncbiprotein

position:7204:-1
position: 7204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7124-7204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6885-7035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6736-6801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6126-6137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5936-6005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5768-5836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5613-5678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5420-5450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5267-5335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4930-5181:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4765-4854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4621-4691:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4420-4525:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4103-4196:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3887-4023:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3619-3774:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3360-3506:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3004-3150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2651-2776:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2465-2549:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2272-2376:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2070-2172:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1848-1975:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1519-1624:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1143-1301:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:777-945:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:500-703:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:317-412:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1-92:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(6767..6801,6885..7035,7124..7204))
location: region:6767-7204:-1
so has part: feature:7124-7204:-1:exon
so has part: feature:6885-7035:-1:exon
so has part: feature:6767-6801:-1:exon

position:6767:-1
position: 6767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7124-7204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6885-7035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6767-6801:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); Region: Interaction with SUPT4H1. /evidence=ECO:0000250
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(4996..5181,5267..5335,5420..5449))
location: region:4996-5449:-1
so has part: feature:5420-5449:-1:exon
so has part: feature:5267-5335:-1:exon
so has part: feature:4996-5181:-1:exon

position:4996:-1
position: 4996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5449:-1
position: 5449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5420-5449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5267-5335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4996-5181:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); Region: Interaction with RNA polymerase II. /evidence=ECO:0000250
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(4001..4023,4103..4196,4420..4525,4621..4691,4765..4794))
location: region:4001-4794:-1
so has part: feature:4765-4794:-1:exon
so has part: feature:4621-4691:-1:exon
so has part: feature:4420-4525:-1:exon
so has part: feature:4103-4196:-1:exon
so has part: feature:4001-4023:-1:exon

position:4001:-1
position: 4001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4794:-1
position: 4794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4765-4794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4621-4691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4420-4525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4103-4196:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4001-4023:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(2303..2376,2465..2501))
location: region:2303-2501:-1
so has part: feature:2465-2501:-1:exon
so has part: feature:2303-2376:-1:exon

position:2303:-1
position: 2303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501:-1
position: 2501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465-2501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2303-2376:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(590..703,777..945,1143..1301,1519..1624,1848..1975,2070..2089))
location: region:590-2089:-1
so has part: feature:2070-2089:-1:exon
so has part: feature:1848-1975:-1:exon
so has part: feature:1519-1624:-1:exon
so has part: feature:1143-1301:-1:exon
so has part: feature:777-945:-1:exon
so has part: feature:590-703:-1:exon

position:590:-1
position: 590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2089:-1
position: 2089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2070-2089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1848-1975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1519-1624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143-1301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777-945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590-703:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); Region: 9 X 7 AA approximate tandem repeats of G-S-[QR]-T-P-X-[YQ], motif CTR1
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(1560..1624,1848..1974))
location: region:1560-1974:-1
so has part: feature:1848-1974:-1:exon
so has part: feature:1560-1624:-1:exon

position:1560:-1
position: 1560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974:-1
position: 1974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1848-1974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560-1624:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: Phosphothreonine, by CDK9. /evidence=ECO:0000250; propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); phosphorylation site
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(1909..1911)
location: region:1909-1911:-1
so has part: feature:1909-1911:-1:exon

position:1909:-1
position: 1909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911:-1
position: 1911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1909-1911:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: Phosphothreonine, by CDK9. /evidence=ECO:0000250; propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); phosphorylation site
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(1882..1884)
location: region:1882-1884:-1
so has part: feature:1882-1884:-1:exon

position:1882:-1
position: 1882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1884:-1
position: 1884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882-1884:-1:exon

SUPT5H
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: SUPT5H
note: propagated from UniProtKB/Swiss-Prot (Q5ZI08.1); Region: 10 X 8 AA approximate tandem repeats of P-[TS]-P-S-P-[QA]-[SG]-Y, motif CTR2
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(674..703,777..945,1143..1264))
location: region:674-1264:-1
so has part: feature:1143-1264:-1:exon
so has part: feature:777-945:-1:exon
so has part: feature:674-703:-1:exon

position:674:-1
position: 674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264:-1
position: 1264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143-1264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777-945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674-703:-1:exon

LOC107055390
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107055390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7686..9039)
location: region:7686-9039:-1
so has part: feature:7686-9039:-1:exon
subclass of: SO_0000010

107055390
type: Gene
SIO_000068: ncbigene

position:7686:-1
position: 7686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9039:-1
position: 9039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7686-9039:-1:exon

LOC107055390
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107055390
product: tristetraprolin-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_015300220.4
SIO_010081: LOC107055390
subclass of: SO_0000673
so part of: LOC107055390
location: complement(join(7686..8812,8910..9039))
location: region:7686-9039:-1
so has part: feature:8910-9039:-1:exon
so has part: feature:7686-8812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8910-9039:-1:exon

position:8910:-1
position: 8910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7686-8812:-1:exon

position:8812:-1
position: 8812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107055390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107055390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA decay activator protein ZFP36-like isoform X1
translation: MGAPIKATRRDAAGSAALPLPAPLLPPWLPPQLGPLRSRCVRARSAGSRPGSRLRSPRGLPVPRGGRRPRSWAVCCAPSAPRAAAPCPPRPASLLGTAGPPPGLARPQPPDTALLALAALTLGADPPGPLPPPFPSRASAPLSSLGVALLSPTSREPSQPSPSPPQSPLSFSLSPPSSPPSPLYKTELCRPFTATGRCRYGARCQFAHGPEELRGLRRHPKYRTQPCSTFQRCGTCPYGSRCHFLHGPAPAEGSAGSPGSPHRLPVFDRISVSE
SIO_010081: LOC107055390
subclass of: SO_0000673
so part of: LOC107055390
location: complement(join(8113..8812,8910..9034))
location: region:8113-9034:-1
so has part: feature:8910-9034:-1:exon
so has part: feature:8113-8812:-1:exon

XP_015155706.2
type: Protein
SIO_000068: ncbiprotein

position:8113:-1
position: 8113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9034:-1
position: 9034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8910-9034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8113-8812:-1:exon

MED29
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: MED29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9496..10979)
location: region:9496-10979:-1
so has part: feature:9496-10979:-1:exon
subclass of: SO_0000010

107055391
type: Gene
SIO_000068: ncbigene

position:9496:-1
position: 9496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10979:-1
position: 10979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9496-10979:-1:exon

MED29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: MED29
product: mediator complex subunit 29
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300221.3
SIO_010081: MED29
subclass of: SO_0000673
so part of: MED29
location: complement(join(9496..9803,9972..10056,10307..10365,10742..10979))
location: region:9496-10979:-1
so has part: feature:10742-10979:-1:exon
so has part: feature:10307-10365:-1:exon
so has part: feature:9972-10056:-1:exon
so has part: feature:9496-9803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10742-10979:-1:exon

position:10742:-1
position: 10742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10307-10365:-1:exon

position:10307:-1
position: 10307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10365:-1
position: 10365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9972-10056:-1:exon

position:9972:-1
position: 9972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10056:-1
position: 10056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9496-9803:-1:exon

position:9803:-1
position: 9803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: MED29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 29
translation: MAAPPQPQPGPPAAPAPPPLSAAPGPGQGAGPGPPLPAQVAAAQAQDFDPVQRFRLLIPQLKESLQTLMKVAAQNLVQNSNIDNGQKSADGALQRFDKSLEEFYALCDQLELCLRLAHECLSQSFDSAKHAPALVPAAPKGEGAAGESLPYTQYLPLIKAQIAGAKDIHNALLEGANKITGKLPPTGGP
SIO_010081: MED29
subclass of: SO_0000673
so part of: MED29
location: complement(join(9576..9803,9972..10056,10307..10365,10742..10939))
location: region:9576-10939:-1
so has part: feature:10742-10939:-1:exon
so has part: feature:10307-10365:-1:exon
so has part: feature:9972-10056:-1:exon
so has part: feature:9576-9803:-1:exon

XP_015155707.1
type: Protein
SIO_000068: ncbiprotein

position:9576:-1
position: 9576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10939:-1
position: 10939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10742-10939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10307-10365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9972-10056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9576-9803:-1:exon

PAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: PAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11047..14250
location: region:11047-14250:1
so has part: feature:11047-14250:1:exon
subclass of: SO_0000010

100858108
type: Gene
SIO_000068: ncbigene

position:11047:1
position: 11047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14250:1
position: 14250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11047-14250:1:exon

PAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAF1
product: PAF1 homolog, Paf1/RNA polymerase II complex component
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300217.4
SIO_010081: PAF1
subclass of: SO_0000673
so part of: PAF1
location: join(11047..11169,11273..11302,11378..11470,11557..11678,11771..11837,11950..12051,12133..12238,12346..12414,12527..12630,12720..12836,13066..13194,13267..13372,13473..13560,13648..14250)
location: region:11047-14250:1
so has part: feature:11047-11169:1:exon
so has part: feature:11273-11302:1:exon
so has part: feature:11378-11470:1:exon
so has part: feature:11557-11678:1:exon
so has part: feature:11771-11837:1:exon
so has part: feature:11950-12051:1:exon
so has part: feature:12133-12238:1:exon
so has part: feature:12346-12414:1:exon
so has part: feature:12527-12630:1:exon
so has part: feature:12720-12836:1:exon
so has part: feature:13066-13194:1:exon
so has part: feature:13267-13372:1:exon
so has part: feature:13473-13560:1:exon
so has part: feature:13648-14250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11047-11169:1:exon

position:11169:1
position: 11169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11273-11302:1:exon

position:11273:1
position: 11273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11302:1
position: 11302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11378-11470:1:exon

position:11378:1
position: 11378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11470:1
position: 11470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11557-11678:1:exon

position:11557:1
position: 11557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11678:1
position: 11678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11771-11837:1:exon

position:11771:1
position: 11771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11837:1
position: 11837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11950-12051:1:exon

position:11950:1
position: 11950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12051:1
position: 12051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12133-12238:1:exon

position:12133:1
position: 12133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12238:1
position: 12238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12346-12414:1:exon

position:12346:1
position: 12346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12414:1
position: 12414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12527-12630:1:exon

position:12527:1
position: 12527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12630:1
position: 12630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12720-12836:1:exon

position:12720:1
position: 12720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12836:1
position: 12836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13066-13194:1:exon

position:13066:1
position: 13066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13194:1
position: 13194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13267-13372:1:exon

position:13267:1
position: 13267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13372:1
position: 13372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13473-13560:1:exon

position:13473:1
position: 13473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13560:1
position: 13560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13648-14250:1:exon

position:13648:1
position: 13648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II-associated factor 1 homolog
translation: MAPTIQTQAQREEPGHRPGSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPSVLLDPADEKLLEEEIQAPTSSKRSQQHAKVVPWMRKTEYISTEFNRYGVSNEKPEVKIGVSVKQQFTEEEIYKDRDSQIAAIEKTFEDAQKAITQHYSKPRVTPLEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGMMDEEGNQFVAYFLPVEETLRKRKRDQEEEMDYAPEDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRARAGVQSGTNAVLVVKHRDMNEKELEAQEARRAQLENHEPEEEEEEEMEAEKEAPGSDEEREKGSESEGAASGEEEEEAEGSGASSSEQGGSAHSEDDAEDEEEEAARGARRGGSDAARAARDQEEIFGSDDDEDEEDDDDEEESEGGGSEGGPPRSPRLSPSEASEDEESASEASDSSSD
SIO_010081: PAF1
subclass of: SO_0000673
so part of: PAF1
location: join(11120..11169,11273..11302,11378..11470,11557..11678,11771..11837,11950..12051,12133..12238,12346..12414,12527..12630,12720..12836,13066..13194,13267..13372,13473..13560,13648..14021)
location: region:11120-14021:1
so has part: feature:11120-11169:1:exon
so has part: feature:11273-11302:1:exon
so has part: feature:11378-11470:1:exon
so has part: feature:11557-11678:1:exon
so has part: feature:11771-11837:1:exon
so has part: feature:11950-12051:1:exon
so has part: feature:12133-12238:1:exon
so has part: feature:12346-12414:1:exon
so has part: feature:12527-12630:1:exon
so has part: feature:12720-12836:1:exon
so has part: feature:13066-13194:1:exon
so has part: feature:13267-13372:1:exon
so has part: feature:13473-13560:1:exon
so has part: feature:13648-14021:1:exon

XP_015155703.1
type: Protein
SIO_000068: ncbiprotein

position:11120:1
position: 11120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14021:1
position: 14021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11120-11169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11273-11302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11378-11470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11557-11678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11771-11837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11950-12051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12133-12238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12346-12414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12527-12630:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12720-12836:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13066-13194:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13267-13372:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13473-13560:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13648-14021:1:exon

SAMD4B
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SAMD4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14652..20017)
location: region:14652-20017:-1
so has part: feature:14652-20017:-1:exon
subclass of: SO_0000010

101750533
type: Gene
SIO_000068: ncbigene

position:14652:-1
position: 14652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20017:-1
position: 20017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14652-20017:-1:exon

SAMD4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SAMD4B
product: sterile alpha motif domain containing 4B, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_040655124.2
SIO_010081: SAMD4B
subclass of: SO_0000673
so part of: SAMD4B
location: complement(join(14652..15078,15198..15281,15393..15510,15936..16131,16575..16693,16775..16860,16950..17187,17437..17523,17622..17731,17843..18100,18449..18912,19237..19638,19950..20017))
location: region:14652-20017:-1
so has part: feature:19950-20017:-1:exon
so has part: feature:19237-19638:-1:exon
so has part: feature:18449-18912:-1:exon
so has part: feature:17843-18100:-1:exon
so has part: feature:17622-17731:-1:exon
so has part: feature:17437-17523:-1:exon
so has part: feature:16950-17187:-1:exon
so has part: feature:16775-16860:-1:exon
so has part: feature:16575-16693:-1:exon
so has part: feature:15936-16131:-1:exon
so has part: feature:15393-15510:-1:exon
so has part: feature:15198-15281:-1:exon
so has part: feature:14652-15078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19950-20017:-1:exon

position:19950:-1
position: 19950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19237-19638:-1:exon

position:19237:-1
position: 19237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19638:-1
position: 19638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18449-18912:-1:exon

position:18449:-1
position: 18449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18912:-1
position: 18912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17843-18100:-1:exon

position:17843:-1
position: 17843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18100:-1
position: 18100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17622-17731:-1:exon

position:17622:-1
position: 17622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17731:-1
position: 17731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17437-17523:-1:exon

position:17437:-1
position: 17437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17523:-1
position: 17523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16950-17187:-1:exon

position:16950:-1
position: 16950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17187:-1
position: 17187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16775-16860:-1:exon

position:16775:-1
position: 16775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16860:-1
position: 16860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16575-16693:-1:exon

position:16575:-1
position: 16575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16693:-1
position: 16693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15936-16131:-1:exon

position:15936:-1
position: 15936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16131:-1
position: 16131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:15393-15510:-1:exon

position:15393:-1
position: 15393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15510:-1
position: 15510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:15198-15281:-1:exon

position:15198:-1
position: 15198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15281:-1
position: 15281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14652-15078:-1:exon

position:15078:-1
position: 15078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMD4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SAMD4B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein Smaug homolog 2 isoform X1
translation: MMFRDQVGIVAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCADIHLLEAEANSAAAISQWPQEPAEAAVALLLAHLPLLQPGNAAAKAEYMKRLQKVLAYAIESNRCVEESRQLLSYALIHPATTLDDRSALALWLGHLEERLAGTPQPPRPPPRPDAAPPPPRRAPHDWPEHGPPEIGPPWPEAAPRENGHPPFHPPSSGNGLGGTGDRLSAALPCQLHPSPLKRSLSLVPGSPQGGSGEWPGGGEEPGPPRTPFGDHAPLSPQSSVASSGSEQTEEPTGGRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEHHLESQNVTKGARHKIALSIQKLRERQSVLKALEKDILEGGNLWTALQELQQIMVTPIKAFRPPPAPPANGAHDGAPPGAADAFAPHPAADTEAPAAPVPDGDIPGQFTRVMGKVCTQLLVSRPDEENITSYLQLLEKCLSHEAFTETQKKRLLSWKQQVLKLLRAFPKKVPLDGQGYRPPKGWGFGSNSLPIAGSVGGAGGRRGQRPFALPPRALPPARMGLLGPAGGGPAPRPPLGATPLGAQGRQSLWFSSGGAGGAPGSRSVVQRTHSLPVHTSPQALLAFPQECPVPGTDLEINPTLESLCLSMTEHALGDGADKTSTI
SIO_010081: SAMD4B
subclass of: SO_0000673
so part of: SAMD4B
location: complement(join(15050..15078,15198..15281,15393..15510,15936..16131,16575..16693,16775..16860,16950..17187,17437..17523,17622..17731,17843..18100,18449..18912,19237..19432))
location: region:15050-19432:-1
so has part: feature:19237-19432:-1:exon
so has part: feature:18449-18912:-1:exon
so has part: feature:17843-18100:-1:exon
so has part: feature:17622-17731:-1:exon
so has part: feature:17437-17523:-1:exon
so has part: feature:16950-17187:-1:exon
so has part: feature:16775-16860:-1:exon
so has part: feature:16575-16693:-1:exon
so has part: feature:15936-16131:-1:exon
so has part: feature:15393-15510:-1:exon
so has part: feature:15198-15281:-1:exon
so has part: feature:15050-15078:-1:exon

XP_040511058.1
type: Protein
SIO_000068: ncbiprotein

position:15050:-1
position: 15050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19432:-1
position: 19432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19237-19432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18449-18912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17843-18100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17622-17731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17437-17523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16950-17187:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16775-16860:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16575-16693:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15936-16131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15393-15510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15198-15281:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15050-15078:-1:exon

LRFN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LRFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20464..26616
location: region:20464-26616:1
so has part: feature:20464-26616:1:exon
subclass of: SO_0000010

101750437
type: Gene
SIO_000068: ncbigene

position:20464:1
position: 20464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26616:1
position: 26616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20464-26616:1:exon

LRFN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LRFN1
product: leucine rich repeat and fibronectin type III domain containing 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_015300223.4
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: join(20464..20681,22552..22599,23014..24367,24987..26616)
location: region:20464-26616:1
so has part: feature:20464-20681:1:exon
so has part: feature:22552-22599:1:exon
so has part: feature:23014-24367:1:exon
so has part: feature:24987-26616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20464-20681:1:exon

position:20681:1
position: 20681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22552-22599:1:exon

position:22552:1
position: 22552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22599:1
position: 22599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23014-24367:1:exon

position:23014:1
position: 23014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24367:1
position: 24367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24987-26616:1:exon

position:24987:1
position: 24987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRFN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LRFN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1 isoform X1
translation: MAKLLVPLVVLGAVAQRCPPRCLCPAAAPSPTLLCARTGLLAVPPSLDRGAVELRLADNFIGAVGRTDFANMSSLVHLTLSRNGLRRLAPGAFADLRALRALHLDGNRLPALSGPQLRGLASLRHLILANNQLAAIEPAAFAAFAATVEDLDLSHNNLPALPWEAVAAMASLATLTLDHNLLERVPATALSRLPRLARLDLTANRLRALPPVPGPPGPSLAAGGNPLHCNCELLWLRRLARPDGLESCASPPSLAGRLLWAVPEEELACRAPHIAGAAASPSAVLEGQPLRLGCAANGDPPPALHWLGPDGRLVQNGSRRALGADGSLQLRVATLRDHGAFTCVASNAAGEAAARVEVAVLPLPVPHRHGDGDGEAQAGPGPSDMARAGANESLPAGAERRIVAADLTASSARIRWLPQRHVPGLRMFQIQYNSSIDDSLVYRLLPPSSRSFVLRDLAAGREYDLCVSALYAEGGAAPPASRALGCVRFATAGGAPGCAAPRPHFLGGTVIIVIGAAIAASVLVFILILTARYKAARRPPAAAVASVCSQTNGAHRAPEPEPPPPAAPAGARGSPGPERARRRPRAVSQPQLPSARPDSAARIAAAPRRARRAAPAAPVVRQHPLDAGEHRVTGGGTPGRWRRRWGCPRVRPRVLFRAPLGAGRQRGVLLRALGCRWTFGCPNAALGASQLQ
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: join(23039..24367,24987..25737)
location: region:23039-25737:1
so has part: feature:23039-24367:1:exon
so has part: feature:24987-25737:1:exon

XP_015155709.3
type: Protein
SIO_000068: ncbiprotein

position:23039:1
position: 23039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25737:1
position: 25737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23039-24367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24987-25737:1:exon

SYCN
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SYCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 27225..28850
location: region:27225-28850:1
so has part: feature:27225-28850:1:exon
subclass of: SO_0000010

100858140
type: Gene
SIO_000068: ncbigene

position:27225:1
position: 27225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28850:1
position: 28850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27225-28850:1:exon

SYCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SYCN
product: syncollin
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300222.4
SIO_010081: SYCN
subclass of: SO_0000673
so part of: SYCN
location: 27225..28850
location: region:27225-28850:1
so has part: feature:27225-28850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27225-28850:1:exon

SYCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SYCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncollin
translation: MAAVLAAVLAAVLAVCGAQCPTAADLKPANGTRLCAQLYTEDSVYYDRCCAGNSLAVPPGADVPYMPTGWAGEVSSLVVGTRCELTVWSRAGKGGSTKHFSAGVYPRLQEVRRGLFRDWNDAIRSYYCKCN
SIO_010081: SYCN
subclass of: SO_0000673
so part of: SYCN
location: 27237..27632
location: region:27237-27632:1
so has part: feature:27237-27632:1:exon

XP_015155708.1
type: Protein
SIO_000068: ncbiprotein

position:27237:1
position: 27237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27632:1
position: 27632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27237-27632:1:exon

PAK4
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28696..48300)
location: region:28696-48300:-1
so has part: feature:28696-48300:-1:exon
subclass of: SO_0000010

770462
type: Gene
SIO_000068: ncbigene

position:28696:-1
position: 28696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48300:-1
position: 48300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28696-48300:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655121.2
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,48241..48300))
location: region:28696-48300:-1
so has part: feature:48241-48300:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48241-48300:-1:exon

position:48241:-1
position: 48241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

position:34486:-1
position: 34486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34709:-1
position: 34709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

position:32286:-1
position: 32286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32891:-1
position: 32891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

position:31364:-1
position: 31364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31804:-1
position: 31804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

position:30962:-1
position: 30962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31095:-1
position: 31095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

position:30762:-1
position: 30762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30888:-1
position: 30888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

position:29744:-1
position: 29744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29869:-1
position: 29869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

position:29519:-1
position: 29519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29653:-1
position: 29653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:28696-29437:-1:exon

position:29437:-1
position: 29437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144489.3
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,48241..48300))
location: region:28696-48300:-1
so has part: feature:48241-48300:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48241-48300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

position:30437:-1
position: 30437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30463:-1
position: 30463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144485.3
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,48227..48300))
location: region:28696-48300:-1
so has part: feature:48227-48300:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48227-48300:-1:exon

position:48227:-1
position: 48227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144486.3
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,34801..34990,48227..48300))
location: region:28696-48300:-1
so has part: feature:48227-48300:-1:exon
so has part: feature:34801-34990:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48227-48300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34801-34990:-1:exon

position:34801:-1
position: 34801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34990:-1
position: 34990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X9
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905085.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,46963..47122))
location: region:28696-47122:-1
so has part: feature:46963-47122:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

position:47122:-1
position: 47122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46963-47122:-1:exon

position:46963:-1
position: 46963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X11
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905088.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,43650..46052))
location: region:28696-46052:-1
so has part: feature:43650-46052:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

position:46052:-1
position: 46052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43650-46052:-1:exon

position:43650:-1
position: 43650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X13
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905086.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,42810..43016))
location: region:28696-43016:-1
so has part: feature:42810-43016:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
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so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
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so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

position:43016:-1
position: 43016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42810-43016:-1:exon

position:42810:-1
position: 42810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905082.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,41507..41819))
location: region:28696-41819:-1
so has part: feature:41507-41819:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

position:41819:-1
position: 41819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41507-41819:-1:exon

position:41507:-1
position: 41507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X7
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905084.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,34801..34990,41169..41307))
location: region:28696-41307:-1
so has part: feature:41169-41307:-1:exon
so has part: feature:34801-34990:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
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so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

position:41307:-1
position: 41307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41169-41307:-1:exon

position:41169:-1
position: 41169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34801-34990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905081.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,40663..41307))
location: region:28696-41307:-1
so has part: feature:40663-41307:-1:exon
so has part: feature:34486-34709:-1:exon
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so has part: feature:30762-30888:-1:exon
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so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40663-41307:-1:exon

position:40663:-1
position: 40663
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X12
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905089.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,41169..41285))
location: region:28696-41285:-1
so has part: feature:41169-41285:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

position:41285:-1
position: 41285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41169-41285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X10
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905087.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,40163..40406))
location: region:28696-40406:-1
so has part: feature:40163-40406:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

position:40406:-1
position: 40406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40163-40406:-1:exon

position:40163:-1
position: 40163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X8
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144488.3
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(28696..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,39308..39571))
location: region:28696-39571:-1
so has part: feature:39308-39571:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:28696-29437:-1:exon

position:39571:-1
position: 39571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39308-39571:-1:exon

position:39308:-1
position: 39308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28696-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X4
translation: MGSPRSHCCPDRHPGVPPAGFWAALPEPELILPAELAGEESALLSRYSPCFKGLLTAVTMFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,41507..41663))
location: region:29282-41663:-1
so has part: feature:41507-41663:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_046761038.1
type: Protein
SIO_000068: ncbiprotein

position:29282:-1
position: 29282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41663:-1
position: 41663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41507-41663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MGTGKFAESGAQLRLLAPTPLFCAGVPQPCALLPHSEFLLRQFSFPLPPLACRKQDGDGLLTAVTMFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34709,40663..40837))
location: region:29282-40837:-1
so has part: feature:40663-40837:-1:exon
so has part: feature:34486-34709:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_046761037.1
type: Protein
SIO_000068: ncbiprotein

position:40837:-1
position: 40837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40663-40837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34486-34709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_040511055.1
type: Protein
SIO_000068: ncbiprotein

position:34689:-1
position: 34689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_025000253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_025000254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_025000256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_025000257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_046761040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_046761041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_046761042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_046761043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_046761044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLSEDVGRSKEKSCPAPRGEPDRGKERPRERDPQRPRGQEPGPRAGGRPPPPEYPRPPPERDGPADRDCSERDERVVRRERAEPCDKRPKSTYGSESSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPVSGTAGSSRAQPPGPPRSKVPEPPTGLTPHASEPHLARPPQPGPPPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRKTPATQTPKVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(29282..29437,29519..29653,29744..29869,30437..30463,30762..30888,30962..31095,31364..31804,32286..32891,34486..34689))
location: region:29282-34689:-1
so has part: feature:34486-34689:-1:exon
so has part: feature:32286-32891:-1:exon
so has part: feature:31364-31804:-1:exon
so has part: feature:30962-31095:-1:exon
so has part: feature:30762-30888:-1:exon
so has part: feature:30437-30463:-1:exon
so has part: feature:29744-29869:-1:exon
so has part: feature:29519-29653:-1:exon
so has part: feature:29282-29437:-1:exon

XP_046761045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34486-34689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32286-32891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31364-31804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30962-31095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30762-30888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30437-30463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29744-29869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29519-29653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29282-29437:-1:exon

MRPS12
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: MRPS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 48449..49173
location: region:48449-49173:1
so has part: feature:48449-49173:1:exon
subclass of: SO_0000010

770472
type: Gene
SIO_000068: ncbigene

position:48449:1
position: 48449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49173:1
position: 49173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48449-49173:1:exon

MRPS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: MRPS12
product: mitochondrial ribosomal protein S12
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_001233806.6
SIO_010081: MRPS12
subclass of: SO_0000673
so part of: MRPS12
location: join(48449..48491,48618..48691,48762..49173)
location: region:48449-49173:1
so has part: feature:48449-48491:1:exon
so has part: feature:48618-48691:1:exon
so has part: feature:48762-49173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48449-48491:1:exon

position:48491:1
position: 48491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48618-48691:1:exon

position:48618:1
position: 48618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48691:1
position: 48691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48762-49173:1:exon

position:48762:1
position: 48762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: MRPS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S12, mitochondrial
translation: MSLLAVLRTAASLRGCVLGAPPTAAMATLNQMHRQGRPKPPPPKPGPTFGRPQLKGVVVRNLIRKPKKPNSANRKCVRVRLSNGREVVCFVPGEGHNLQEHHVVLVQGGRTQDLPGVKLTVVRGKYDCAHVQKKK
SIO_010081: MRPS12
subclass of: SO_0000673
so part of: MRPS12
location: join(48643..48691,48762..49120)
location: region:48643-49120:1
so has part: feature:48643-48691:1:exon
so has part: feature:48762-49120:1:exon

XP_001233807.3
type: Protein
SIO_000068: ncbiprotein

position:48643:1
position: 48643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49120:1
position: 49120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48643-48691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48762-49120:1:exon

SARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 49293..52802
location: region:49293-52802:1
so has part: feature:49293-52802:1:exon
subclass of: SO_0000010

100858214
type: Gene
SIO_000068: ncbigene

position:49293:1
position: 49293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52802:1
position: 52802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49293-52802:1:exon

SARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SARS2
product: seryl-tRNA synthetase 2, mitochondrial, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_015300218.4
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: join(49293..49562,49691..49786,49870..49899,50012..50152,50229..50283,50397..50460,50539..50644,50739..50786,50873..50981,51189..51234,51333..51420,51503..51615,51700..51793,51914..52006,52102..52167,52288..52802)
location: region:49293-52802:1
so has part: feature:49293-49562:1:exon
so has part: feature:49691-49786:1:exon
so has part: feature:49870-49899:1:exon
so has part: feature:50012-50152:1:exon
so has part: feature:50229-50283:1:exon
so has part: feature:50397-50460:1:exon
so has part: feature:50539-50644:1:exon
so has part: feature:50739-50786:1:exon
so has part: feature:50873-50981:1:exon
so has part: feature:51189-51234:1:exon
so has part: feature:51333-51420:1:exon
so has part: feature:51503-51615:1:exon
so has part: feature:51700-51793:1:exon
so has part: feature:51914-52006:1:exon
so has part: feature:52102-52167:1:exon
so has part: feature:52288-52802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49293-49562:1:exon

position:49562:1
position: 49562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49691-49786:1:exon

position:49691:1
position: 49691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49786:1
position: 49786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49870-49899:1:exon

position:49870:1
position: 49870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49899:1
position: 49899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50012-50152:1:exon

position:50012:1
position: 50012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50152:1
position: 50152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:50229-50283:1:exon

position:50229:1
position: 50229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50283:1
position: 50283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:50397-50460:1:exon

position:50397:1
position: 50397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50460:1
position: 50460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50539-50644:1:exon

position:50539:1
position: 50539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50644:1
position: 50644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:50739-50786:1:exon

position:50739:1
position: 50739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50786:1
position: 50786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:50873-50981:1:exon

position:50873:1
position: 50873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50981:1
position: 50981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:51189-51234:1:exon

position:51189:1
position: 51189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51234:1
position: 51234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:51333-51420:1:exon

position:51333:1
position: 51333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51420:1
position: 51420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:51503-51615:1:exon

position:51503:1
position: 51503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51615:1
position: 51615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:51700-51793:1:exon

position:51700:1
position: 51700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51793:1
position: 51793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:51914-52006:1:exon

position:51914:1
position: 51914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52006:1
position: 52006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:52102-52167:1:exon

position:52102:1
position: 52102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52167:1
position: 52167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:52288-52802:1:exon

position:52288:1
position: 52288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SARS2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: SARS2
product: seryl-tRNA synthetase 2, mitochondrial, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_001470471.4
SIO_010081: SARS2
so part of: SARS2
location: join(49293..49562,49691..49786,49870..49899,50012..50152,50229..50283,50397..50460,50539..50644,50739..50786,50873..50981,51189..51234,51333..51420,51531..51615,51700..51793,51914..52006,52102..52167,52288..52315)
location: region:49293-52315:1
so has part: feature:49293-49562:1:exon
so has part: feature:49691-49786:1:exon
so has part: feature:49870-49899:1:exon
so has part: feature:50012-50152:1:exon
so has part: feature:50229-50283:1:exon
so has part: feature:50397-50460:1:exon
so has part: feature:50539-50644:1:exon
so has part: feature:50739-50786:1:exon
so has part: feature:50873-50981:1:exon
so has part: feature:51189-51234:1:exon
so has part: feature:51333-51420:1:exon
so has part: feature:51531-51615:1:exon
so has part: feature:51700-51793:1:exon
so has part: feature:51914-52006:1:exon
so has part: feature:52102-52167:1:exon
so has part: feature:52288-52315:1:exon

position:52315:1
position: 52315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49293-49562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49691-49786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49870-49899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50012-50152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50229-50283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50397-50460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50539-50644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50739-50786:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:50873-50981:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51189-51234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51333-51420:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51531-51615:1:exon

position:51531:1
position: 51531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:51700-51793:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:51914-52006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52102-52167:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52288-52315:1:exon

SARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase, mitochondrial
translation: MAAPRALAAARCAVAAAARGRRSAGTGAAPRGPAERSRLYEHVREGLSARPQLDMAALSTNPAQAARDLELRKGPLREGELREILQTWARLEEVRAAIARLEAEKEEVALAVHALVTAHAKDKLHAVPEYTALRERGRAVRLQLKELLAEEAALDERFYLHALQLPNSTHPAAPVGDESQARVLEVVGEKPAFDFQPKGHLELGEELDIIRQRRLSHISGHRSYYLCGAGALLQHALVHFVLAKLVPKGFLPMTVPDLLRGAVFEGCGMQPNTTPSPVYCIDPARFEDLCLAGTSEVGIAGYFMDHAVRLQDMPIRIVCSSTCYRAETDTGREPWGLYRVHQFTKVEMFGVTAAESGAESEMLLDEFLMLQKEIFSELGLHYRVLDMPTQELGLPAYRKFDIEAWMPGRGKYGEISSTSNCTDYQSRRLNIMYSDGAGKLHHAHTVNGTACAVPRLLIALLECNQLPDGSVRVPPALQPFVGQDVITRPPAPLLRYIGPNQPGGGQGVS
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: join(49311..49562,49691..49786,49870..49899,50012..50152,50229..50283,50397..50460,50539..50644,50739..50786,50873..50981,51189..51234,51333..51420,51503..51615,51700..51793,51914..52006,52102..52167,52288..52416)
location: region:49311-52416:1
so has part: feature:49311-49562:1:exon
so has part: feature:49691-49786:1:exon
so has part: feature:49870-49899:1:exon
so has part: feature:50012-50152:1:exon
so has part: feature:50229-50283:1:exon
so has part: feature:50397-50460:1:exon
so has part: feature:50539-50644:1:exon
so has part: feature:50739-50786:1:exon
so has part: feature:50873-50981:1:exon
so has part: feature:51189-51234:1:exon
so has part: feature:51333-51420:1:exon
so has part: feature:51503-51615:1:exon
so has part: feature:51700-51793:1:exon
so has part: feature:51914-52006:1:exon
so has part: feature:52102-52167:1:exon
so has part: feature:52288-52416:1:exon

XP_015155704.2
type: Protein
SIO_000068: ncbiprotein

position:49311:1
position: 49311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52416:1
position: 52416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49311-49562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49691-49786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49870-49899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50012-50152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50229-50283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50397-50460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50539-50644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50739-50786:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:50873-50981:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51189-51234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51333-51420:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51503-51615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:51700-51793:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:51914-52006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52102-52167:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52288-52416:1:exon

NFKBIB
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: NFKBIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52619..55053)
location: region:52619-55053:-1
so has part: feature:52619-55053:-1:exon
subclass of: SO_0000010

100858419
type: Gene
SIO_000068: ncbigene

position:52619:-1
position: 52619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55053:-1
position: 55053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52619-55053:-1:exon

NFKBIB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: NFKBIB
product: NFKB inhibitor beta
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300227.3
SIO_010081: NFKBIB
subclass of: SO_0000673
so part of: NFKBIB
location: complement(join(52619..52856,52928..53179,53268..53356,53821..54040,54487..54592,54692..55053))
location: region:52619-55053:-1
so has part: feature:54692-55053:-1:exon
so has part: feature:54487-54592:-1:exon
so has part: feature:53821-54040:-1:exon
so has part: feature:53268-53356:-1:exon
so has part: feature:52928-53179:-1:exon
so has part: feature:52619-52856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54692-55053:-1:exon

position:54692:-1
position: 54692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54487-54592:-1:exon

position:54487:-1
position: 54487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54592:-1
position: 54592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53821-54040:-1:exon

position:53821:-1
position: 53821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54040:-1
position: 54040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:53268-53356:-1:exon

position:53268:-1
position: 53268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53356:-1
position: 53356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:52928-53179:-1:exon

position:52928:-1
position: 52928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53179:-1
position: 53179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52619-52856:-1:exon

position:52856:-1
position: 52856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFKBIB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: NFKBIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B inhibitor beta
translation: MAAAGAAPSGDAKRAEGDEWYDSGLGSLGEGQLAPLPHSPGPGPESPEEAPAAAPEPEAELWLRHVLSFVSEDGDTALHLAVIHEHEAFLDSILQRTAGTAYMDLQNDLGQTALHLAVILGLPGFVRKLRAAGAGLGLQERGGHTALHLACREGQPHCAQHLLGGLRCPLSEEERAQLESVNYDGYTPLHVAILRKDVELVQLLLRAGADSNKAEPSCGRSPLHLAVEAQSPEMAELLLRAGADPAARGYGGRTPLYSARHRPDPRLPQLLRAFGASDSSGDSEDSEEDEDSEDNSSGEEYDDIVINSGRCAD
SIO_010081: NFKBIB
subclass of: SO_0000673
so part of: NFKBIB
location: complement(join(52809..52856,52928..53179,53268..53356,53821..54040,54487..54592,54692..54918))
location: region:52809-54918:-1
so has part: feature:54692-54918:-1:exon
so has part: feature:54487-54592:-1:exon
so has part: feature:53821-54040:-1:exon
so has part: feature:53268-53356:-1:exon
so has part: feature:52928-53179:-1:exon
so has part: feature:52809-52856:-1:exon

XP_015155713.1
type: Protein
SIO_000068: ncbiprotein

position:52809:-1
position: 52809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54918:-1
position: 54918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54692-54918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54487-54592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53821-54040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53268-53356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52928-53179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52809-52856:-1:exon

SIRT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SIRT2
note: sirtuin 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 55256..57929
location: region:55256-57929:1
so has part: feature:55256-57929:1:exon
subclass of: SO_0000010

548628
type: Gene
SIO_000068: ncbigene

position:55256:1
position: 55256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57929:1
position: 57929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55256-57929:1:exon

SIRT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SIRT2
product: sirtuin 2, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001397807.2
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: join(55256..55368,55441..55503,55576..55734,55875..55981,56063..56119,56197..56265,56345..56474,56559..56618,56726..56781,56899..56975,57080..57131,57206..57273,57543..57609,57706..57929)
location: region:55256-57929:1
so has part: feature:55256-55368:1:exon
so has part: feature:55441-55503:1:exon
so has part: feature:55576-55734:1:exon
so has part: feature:55875-55981:1:exon
so has part: feature:56063-56119:1:exon
so has part: feature:56197-56265:1:exon
so has part: feature:56345-56474:1:exon
so has part: feature:56559-56618:1:exon
so has part: feature:56726-56781:1:exon
so has part: feature:56899-56975:1:exon
so has part: feature:57080-57131:1:exon
so has part: feature:57206-57273:1:exon
so has part: feature:57543-57609:1:exon
so has part: feature:57706-57929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55256-55368:1:exon

position:55368:1
position: 55368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55441-55503:1:exon

position:55441:1
position: 55441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55503:1
position: 55503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:55576-55734:1:exon

position:55576:1
position: 55576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55734:1
position: 55734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:55875-55981:1:exon

position:55875:1
position: 55875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55981:1
position: 55981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:56063-56119:1:exon

position:56063:1
position: 56063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56119:1
position: 56119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:56197-56265:1:exon

position:56197:1
position: 56197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56265:1
position: 56265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:56345-56474:1:exon

position:56345:1
position: 56345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56474:1
position: 56474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:56559-56618:1:exon

position:56559:1
position: 56559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56618:1
position: 56618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:56726-56781:1:exon

position:56726:1
position: 56726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56781:1
position: 56781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:56899-56975:1:exon

position:56899:1
position: 56899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56975:1
position: 56975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:57080-57131:1:exon

position:57080:1
position: 57080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57131:1
position: 57131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:57206-57273:1:exon

position:57206:1
position: 57206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57273:1
position: 57273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:57543-57609:1:exon

position:57543:1
position: 57543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57609:1
position: 57609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:57706-57929:1:exon

position:57706:1
position: 57706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIRT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SIRT2
product: sirtuin 2, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001017414.2
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: join(55330..55503,55576..55734,55875..55981,56063..56119,56197..56265,56345..56474,56559..56618,56726..56781,56899..56975,57080..57131,57206..57273,57543..57609,57706..57929)
location: region:55330-57929:1
so has part: feature:55330-55503:1:exon
so has part: feature:55576-55734:1:exon
so has part: feature:55875-55981:1:exon
so has part: feature:56063-56119:1:exon
so has part: feature:56197-56265:1:exon
so has part: feature:56345-56474:1:exon
so has part: feature:56559-56618:1:exon
so has part: feature:56726-56781:1:exon
so has part: feature:56899-56975:1:exon
so has part: feature:57080-57131:1:exon
so has part: feature:57206-57273:1:exon
so has part: feature:57543-57609:1:exon
so has part: feature:57706-57929:1:exon

position:55330:1
position: 55330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55330-55503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55576-55734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55875-55981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56063-56119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56197-56265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56345-56474:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56559-56618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56726-56781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56899-56975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57080-57131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57206-57273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:57543-57609:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:57706-57929:1:exon

SIRT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SIRT2
note: NAD-dependent protein deacetylase sirtuin-2 isoform 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2
translation: MSEADGNGGGGVEPGGSLRRSVTPRPIPAAPPPGADPDAEAEGGSEEDSDMELLRNLLARTLGLGTEPPERVLDELSLAGIARFMQSERCRRVVCMVGAGISTAAGIPDFRSPGTGLYANLGRYELPYPEAIFDISYFKQHPEPFFALAKELLPGQLKPTVCHYFMRLLKEKGLLLRCYTQNIDTLERVAGLQPEELVEAHGTFQTAHCLRSSCRHQYDLSWVKEKIFSSLVPKCDKCQSVVKPDIVFFGENLPSRFFSLLQSDFQKVDLLIIMGTSLQVQPFASLVSRVPASTPRLLINKEKTGQSDVFMSLMGFGCGMDFDSDKAYRDVAWLGDCDEGCLALAELLGWKKELQELVRKEHAAIDAVAAPEDTSSASGGDPTSRRGRTDGSGGRAESGGASSEQRGDGKEP
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: join(55353..55503,55576..55734,55875..55981,56063..56119,56197..56265,56345..56474,56559..56618,56726..56781,56899..56975,57080..57131,57206..57273,57543..57609,57706..57891)
location: region:55353-57891:1
so has part: feature:55353-55503:1:exon
so has part: feature:55576-55734:1:exon
so has part: feature:55875-55981:1:exon
so has part: feature:56063-56119:1:exon
so has part: feature:56197-56265:1:exon
so has part: feature:56345-56474:1:exon
so has part: feature:56559-56618:1:exon
so has part: feature:56726-56781:1:exon
so has part: feature:56899-56975:1:exon
so has part: feature:57080-57131:1:exon
so has part: feature:57206-57273:1:exon
so has part: feature:57543-57609:1:exon
so has part: feature:57706-57891:1:exon

NP_001017414.2
type: Protein
SIO_000068: ncbiprotein

position:55353:1
position: 55353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57891:1
position: 57891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55353-55503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55576-55734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55875-55981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56063-56119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56197-56265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56345-56474:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56559-56618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56726-56781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56899-56975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57080-57131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57206-57273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:57543-57609:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:57706-57891:1:exon

SIRT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SIRT2
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform 1
translation: MSEADAPPPGADPDAEAEGGSEEDSDMELLRNLLARTLGLGTEPPERVLDELSLAGIARFMQSERCRRVVCMVGAGISTAAGIPDFRSPGTGLYANLGRYELPYPEAIFDISYFKQHPEPFFALAKELLPGQLKPTVCHYFMRLLKEKGLLLRCYTQNIDTLERVAGLQPEELVEAHGTFQTAHCLRSSCRHQYDLSWVKEKIFSSLVPKCDKCQSVVKPDIVFFGENLPSRFFSLLQSDFQKVDLLIIMGTSLQVQPFASLVSRVPASTPRLLINKEKTGQSDVFMSLMGFGCGMDFDSDKAYRDVAWLGDCDEGCLALAELLGWKKELQELVRKEHAAIDAVAAPEDTSSASGGDPTSRRGRTDGSGGRAESGGASSEQRGDGKEP
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: join(55353..55368,55441..55503,55576..55734,55875..55981,56063..56119,56197..56265,56345..56474,56559..56618,56726..56781,56899..56975,57080..57131,57206..57273,57543..57609,57706..57891)
location: region:55353-57891:1
so has part: feature:55353-55368:1:exon
so has part: feature:55441-55503:1:exon
so has part: feature:55576-55734:1:exon
so has part: feature:55875-55981:1:exon
so has part: feature:56063-56119:1:exon
so has part: feature:56197-56265:1:exon
so has part: feature:56345-56474:1:exon
so has part: feature:56559-56618:1:exon
so has part: feature:56726-56781:1:exon
so has part: feature:56899-56975:1:exon
so has part: feature:57080-57131:1:exon
so has part: feature:57206-57273:1:exon
so has part: feature:57543-57609:1:exon
so has part: feature:57706-57891:1:exon

NP_001384736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55353-55368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55441-55503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55576-55734:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55875-55981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56063-56119:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56197-56265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56345-56474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56559-56618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56726-56781:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:56899-56975:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57080-57131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:57206-57273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:57543-57609:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:57706-57891:1:exon

LOC101749377
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101749377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 58675..64519
location: region:58675-64519:1
so has part: feature:58675-64519:1:exon
subclass of: SO_0000010

101749377
type: Gene
SIO_000068: ncbigene

position:58675:1
position: 58675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64519:1
position: 64519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58675-64519:1:exon

LOC101749377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101749377
product: heterogeneous nuclear ribonucleoprotein L-like, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655122.2
SIO_010081: LOC101749377
subclass of: SO_0000673
so part of: LOC101749377
location: join(58675..58937,59251..59369,59455..59692,59888..59973,60197..60293,60376..60448,62678..63135,63245..63366,63451..63652,63813..63870,63988..64083,64182..64519)
location: region:58675-64519:1
so has part: feature:58675-58937:1:exon
so has part: feature:59251-59369:1:exon
so has part: feature:59455-59692:1:exon
so has part: feature:59888-59973:1:exon
so has part: feature:60197-60293:1:exon
so has part: feature:60376-60448:1:exon
so has part: feature:62678-63135:1:exon
so has part: feature:63245-63366:1:exon
so has part: feature:63451-63652:1:exon
so has part: feature:63813-63870:1:exon
so has part: feature:63988-64083:1:exon
so has part: feature:64182-64519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58675-58937:1:exon

position:58937:1
position: 58937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59251-59369:1:exon

position:59251:1
position: 59251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59369:1
position: 59369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59455-59692:1:exon

position:59455:1
position: 59455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59692:1
position: 59692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59888-59973:1:exon

position:59888:1
position: 59888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59973:1
position: 59973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:60197-60293:1:exon

position:60197:1
position: 60197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60293:1
position: 60293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:60376-60448:1:exon

position:60376:1
position: 60376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60448:1
position: 60448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62678-63135:1:exon

position:62678:1
position: 62678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63135:1
position: 63135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:63245-63366:1:exon

position:63245:1
position: 63245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63366:1
position: 63366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:63451-63652:1:exon

position:63451:1
position: 63451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63652:1
position: 63652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:63813-63870:1:exon

position:63813:1
position: 63813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63870:1
position: 63870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63988-64083:1:exon

position:63988:1
position: 63988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64083:1
position: 64083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:64182-64519:1:exon

position:64182:1
position: 64182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101749377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101749377
product: heterogeneous nuclear ribonucleoprotein L-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144492.3
SIO_010081: LOC101749377
subclass of: SO_0000673
so part of: LOC101749377
location: join(58675..58937,59251..59369,59455..59692,59888..59973,60197..60293,60376..60448,62678..62749,62855..63135,63245..63366,63451..63652,63813..63870,63955..64083,64182..64519)
location: region:58675-64519:1
so has part: feature:58675-58937:1:exon
so has part: feature:59251-59369:1:exon
so has part: feature:59455-59692:1:exon
so has part: feature:59888-59973:1:exon
so has part: feature:60197-60293:1:exon
so has part: feature:60376-60448:1:exon
so has part: feature:62678-62749:1:exon
so has part: feature:62855-63135:1:exon
so has part: feature:63245-63366:1:exon
so has part: feature:63451-63652:1:exon
so has part: feature:63813-63870:1:exon
so has part: feature:63955-64083:1:exon
so has part: feature:64182-64519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58675-58937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59251-59369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59455-59692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59888-59973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60197-60293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60376-60448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62678-62749:1:exon

position:62749:1
position: 62749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:62855-63135:1:exon

position:62855:1
position: 62855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:63245-63366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63451-63652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63813-63870:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63955-64083:1:exon

position:63955:1
position: 63955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:64182-64519:1:exon

LOC101749377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101749377
product: heterogeneous nuclear ribonucleoprotein L-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144493.3
SIO_010081: LOC101749377
subclass of: SO_0000673
so part of: LOC101749377
location: join(58675..58937,59251..59369,59455..59692,59888..59973,60197..60293,60376..60448,62678..62749,62855..63135,63245..63366,63451..63652,63813..63870,63988..64083,64182..64519)
location: region:58675-64519:1
so has part: feature:58675-58937:1:exon
so has part: feature:59251-59369:1:exon
so has part: feature:59455-59692:1:exon
so has part: feature:59888-59973:1:exon
so has part: feature:60197-60293:1:exon
so has part: feature:60376-60448:1:exon
so has part: feature:62678-62749:1:exon
so has part: feature:62855-63135:1:exon
so has part: feature:63245-63366:1:exon
so has part: feature:63451-63652:1:exon
so has part: feature:63813-63870:1:exon
so has part: feature:63988-64083:1:exon
so has part: feature:64182-64519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58675-58937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59251-59369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59455-59692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59888-59973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60197-60293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60376-60448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62678-62749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62855-63135:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63245-63366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63451-63652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63813-63870:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63988-64083:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64182-64519:1:exon

LOC101749377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101749377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein L isoform X3
translation: MSRRRWRGPQSAEGSGRGGEMGKMAAGGGGGGGSGRYYGGGGDGGRAPKRQKTENAEPPPHGPGGPGGGGGAGAGGAENYDDPHKTPASPVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDILGACNAVNYAADNQIYIAGHPAFVNYSTSQKISRPGDSDDSRGVNNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNGVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPGGNPNKRQRQPPLLGDHPAEYGRTLQCWGGGGGGCGGVSPPHGIPNSVPVLPPSFPGGPHGGYHGHYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSKMNCDRVFNIFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQQAIMPGQSYGLEDGSCSYKDFSGSRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFYEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSDALETLGFLNHYQMKNPNGPYPYTLKLCFSTAQHAS
SIO_010081: LOC101749377
subclass of: SO_0000673
so part of: LOC101749377
location: join(58707..58937,59251..59369,59455..59692,59888..59973,60197..60293,60376..60448,62678..63135,63245..63366,63451..63652,63813..63870,63988..64083,64182..64240)
location: region:58707-64240:1
so has part: feature:58707-58937:1:exon
so has part: feature:59251-59369:1:exon
so has part: feature:59455-59692:1:exon
so has part: feature:59888-59973:1:exon
so has part: feature:60197-60293:1:exon
so has part: feature:60376-60448:1:exon
so has part: feature:62678-63135:1:exon
so has part: feature:63245-63366:1:exon
so has part: feature:63451-63652:1:exon
so has part: feature:63813-63870:1:exon
so has part: feature:63988-64083:1:exon
so has part: feature:64182-64240:1:exon

XP_040511056.2
type: Protein
SIO_000068: ncbiprotein

position:58707:1
position: 58707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64240:1
position: 64240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58707-58937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59251-59369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59455-59692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59888-59973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60197-60293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60376-60448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62678-63135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63245-63366:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63451-63652:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63813-63870:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63988-64083:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64182-64240:1:exon

LOC101749377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101749377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein L isoform X1
translation: MSRRRWRGPQSAEGSGRGGEMGKMAAGGGGGGGSGRYYGGGGDGGRAPKRQKTENAEPPPHGPGGPGGGGGAGAGGAENYDDPHKTPASPVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDILGACNAVNYAADNQIYIAGHPAFVNYSTSQKISRPGDSDDSRGVNNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNGVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPGGNPNKRQRQPPLLGDHPAEYGGPHGGYHGHYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSKMNCDRVFNIFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQQAIMPGQSYGLEDGSCSYKDFSGSRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFYEICDELGVKRPSSVKVFSGKTPGLRKGHSSAGERSSSGLLEWESKSDALETLGFLNHYQMKNPNGPYPYTLKLCFSTAQHAS
SIO_010081: LOC101749377
subclass of: SO_0000673
so part of: LOC101749377
location: join(58707..58937,59251..59369,59455..59692,59888..59973,60197..60293,60376..60448,62678..62749,62855..63135,63245..63366,63451..63652,63813..63870,63955..64083,64182..64240)
location: region:58707-64240:1
so has part: feature:58707-58937:1:exon
so has part: feature:59251-59369:1:exon
so has part: feature:59455-59692:1:exon
so has part: feature:59888-59973:1:exon
so has part: feature:60197-60293:1:exon
so has part: feature:60376-60448:1:exon
so has part: feature:62678-62749:1:exon
so has part: feature:62855-63135:1:exon
so has part: feature:63245-63366:1:exon
so has part: feature:63451-63652:1:exon
so has part: feature:63813-63870:1:exon
so has part: feature:63955-64083:1:exon
so has part: feature:64182-64240:1:exon

XP_025000260.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58707-58937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59251-59369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59455-59692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59888-59973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60197-60293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60376-60448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62678-62749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62855-63135:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63245-63366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63451-63652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63813-63870:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63955-64083:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64182-64240:1:exon

LOC101749377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101749377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein L isoform X2
translation: MSRRRWRGPQSAEGSGRGGEMGKMAAGGGGGGGSGRYYGGGGDGGRAPKRQKTENAEPPPHGPGGPGGGGGAGAGGAENYDDPHKTPASPVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDILGACNAVNYAADNQIYIAGHPAFVNYSTSQKISRPGDSDDSRGVNNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNGVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPGGNPNKRQRQPPLLGDHPAEYGGPHGGYHGHYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSKMNCDRVFNIFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQQAIMPGQSYGLEDGSCSYKDFSGSRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFYEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSDALETLGFLNHYQMKNPNGPYPYTLKLCFSTAQHAS
SIO_010081: LOC101749377
subclass of: SO_0000673
so part of: LOC101749377
location: join(58707..58937,59251..59369,59455..59692,59888..59973,60197..60293,60376..60448,62678..62749,62855..63135,63245..63366,63451..63652,63813..63870,63988..64083,64182..64240)
location: region:58707-64240:1
so has part: feature:58707-58937:1:exon
so has part: feature:59251-59369:1:exon
so has part: feature:59455-59692:1:exon
so has part: feature:59888-59973:1:exon
so has part: feature:60197-60293:1:exon
so has part: feature:60376-60448:1:exon
so has part: feature:62678-62749:1:exon
so has part: feature:62855-63135:1:exon
so has part: feature:63245-63366:1:exon
so has part: feature:63451-63652:1:exon
so has part: feature:63813-63870:1:exon
so has part: feature:63988-64083:1:exon
so has part: feature:64182-64240:1:exon

XP_025000261.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58707-58937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59251-59369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59455-59692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59888-59973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60197-60293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60376-60448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62678-62749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62855-63135:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63245-63366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63451-63652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63813-63870:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63988-64083:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64182-64240:1:exon

ECH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ECH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65021..67961
location: region:65021-67961:1
so has part: feature:65021-67961:1:exon
subclass of: SO_0000010

100858352
type: Gene
SIO_000068: ncbigene

position:65021:1
position: 65021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67961:1
position: 67961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65021-67961:1:exon

ECH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ECH1
product: enoyl-CoA hydratase 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015272501.4
SIO_010081: ECH1
subclass of: SO_0000673
so part of: ECH1
location: join(65021..65096,65824..65980,66082..66170,66421..66545,66692..66740,66843..66907,67277..67347,67416..67487,67579..67729,67806..67961)
location: region:65021-67961:1
so has part: feature:65021-65096:1:exon
so has part: feature:65824-65980:1:exon
so has part: feature:66082-66170:1:exon
so has part: feature:66421-66545:1:exon
so has part: feature:66692-66740:1:exon
so has part: feature:66843-66907:1:exon
so has part: feature:67277-67347:1:exon
so has part: feature:67416-67487:1:exon
so has part: feature:67579-67729:1:exon
so has part: feature:67806-67961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65021-65096:1:exon

position:65096:1
position: 65096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65824-65980:1:exon

position:65824:1
position: 65824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65980:1
position: 65980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66082-66170:1:exon

position:66082:1
position: 66082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66170:1
position: 66170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66421-66545:1:exon

position:66421:1
position: 66421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66545:1
position: 66545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:66692-66740:1:exon

position:66692:1
position: 66692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66740:1
position: 66740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:66843-66907:1:exon

position:66843:1
position: 66843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66907:1
position: 66907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:67277-67347:1:exon

position:67277:1
position: 67277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67347:1
position: 67347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:67416-67487:1:exon

position:67416:1
position: 67416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67487:1
position: 67487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:67579-67729:1:exon

position:67579:1
position: 67579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67729:1
position: 67729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67806-67961:1:exon

position:67806:1
position: 67806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ECH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ECH1
product: enoyl-CoA hydratase 1, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046905091.1
SIO_010081: ECH1
subclass of: SO_0000673
so part of: ECH1
location: join(65021..65096,65866..65980,66082..66170,66421..66545,66692..66740,66843..66907,67277..67347,67416..67487,67579..67729,67806..67961)
location: region:65021-67961:1
so has part: feature:65021-65096:1:exon
so has part: feature:65866-65980:1:exon
so has part: feature:66082-66170:1:exon
so has part: feature:66421-66545:1:exon
so has part: feature:66692-66740:1:exon
so has part: feature:66843-66907:1:exon
so has part: feature:67277-67347:1:exon
so has part: feature:67416-67487:1:exon
so has part: feature:67579-67729:1:exon
so has part: feature:67806-67961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65021-65096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65866-65980:1:exon

position:65866:1
position: 65866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66082-66170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66421-66545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66692-66740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66843-66907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67277-67347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67416-67487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67579-67729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67806-67961:1:exon

ECH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ECH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1
translation: MAAISAGLRALRTRPFWLLTRTMASGAAEPQRRSFETLRVMPVQGRVLHVELNRPEKRNAMNGAFWREMVECFQDISQDSSCHAVVISGAGPIFSAGIDLVDMGNEFLMANGEDTARKAWQLQQKIRGYQESFSVLEKCPKPVIAAVHGACIGGGVDLVCACDIRYCSQDAWFQVKEVDIGLAADVGTLQRLPKIVGSQSLVNELAFTARKMMAPEAQSCGLVSRVFPDKAALLQGALELAVAIAARSPVAVQGTKVNLLYSRDHPVPDSLRFMAAWNMSMLQTDDILKSVQAAMEKKGPEAVTYSKL
SIO_010081: ECH1
subclass of: SO_0000673
so part of: ECH1
location: join(65054..65096,65824..65980,66082..66170,66421..66545,66692..66740,66843..66907,67277..67347,67416..67487,67579..67729,67806..67910)
location: region:65054-67910:1
so has part: feature:65054-65096:1:exon
so has part: feature:65824-65980:1:exon
so has part: feature:66082-66170:1:exon
so has part: feature:66421-66545:1:exon
so has part: feature:66692-66740:1:exon
so has part: feature:66843-66907:1:exon
so has part: feature:67277-67347:1:exon
so has part: feature:67416-67487:1:exon
so has part: feature:67579-67729:1:exon
so has part: feature:67806-67910:1:exon

XP_015127987.1
type: Protein
SIO_000068: ncbiprotein

position:65054:1
position: 65054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67910:1
position: 67910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65054-65096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65824-65980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66082-66170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66421-66545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66692-66740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66843-66907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67277-67347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67416-67487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67579-67729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67806-67910:1:exon

ECH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ECH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X2
translation: MAAISAGLRALRTRQPQRRSFETLRVMPVQGRVLHVELNRPEKRNAMNGAFWREMVECFQDISQDSSCHAVVISGAGPIFSAGIDLVDMGNEFLMANGEDTARKAWQLQQKIRGYQESFSVLEKCPKPVIAAVHGACIGGGVDLVCACDIRYCSQDAWFQVKEVDIGLAADVGTLQRLPKIVGSQSLVNELAFTARKMMAPEAQSCGLVSRVFPDKAALLQGALELAVAIAARSPVAVQGTKVNLLYSRDHPVPDSLRFMAAWNMSMLQTDDILKSVQAAMEKKGPEAVTYSKL
SIO_010081: ECH1
subclass of: SO_0000673
so part of: ECH1
location: join(65054..65096,65866..65980,66082..66170,66421..66545,66692..66740,66843..66907,67277..67347,67416..67487,67579..67729,67806..67910)
location: region:65054-67910:1
so has part: feature:65054-65096:1:exon
so has part: feature:65866-65980:1:exon
so has part: feature:66082-66170:1:exon
so has part: feature:66421-66545:1:exon
so has part: feature:66692-66740:1:exon
so has part: feature:66843-66907:1:exon
so has part: feature:67277-67347:1:exon
so has part: feature:67416-67487:1:exon
so has part: feature:67579-67729:1:exon
so has part: feature:67806-67910:1:exon

XP_046761047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65054-65096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65866-65980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66082-66170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66421-66545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66692-66740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66843-66907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67277-67347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67416-67487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67579-67729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67806-67910:1:exon

ACTN4
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ACTN4
note: actinin, alpha 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(69182..86492)
location: region:69182-86492:-1
so has part: feature:69182-86492:-1:exon
subclass of: SO_0000010

396024
type: Gene
SIO_000068: ncbigene

position:69182:-1
position: 69182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86492:-1
position: 86492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69182-86492:-1:exon

ACTN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ACTN4
product: actinin, alpha 4
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001396037.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions, 4 frameshifts compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001396037.1
SIO_010081: ACTN4
subclass of: SO_0000673
so part of: ACTN4
location: complement(join(69182..69390,70086..70244,70796..70876,71059..71205,71442..71621,71705..71839,71993..72176,72283..72417,72497..72605,73304..73454,74056..74203,74421..74651,74743..74835,76904..76989,77252..77333,77483..77561,77670..77757,77825..77911,79213..79332,79476..79590,86314..86492))
location: region:69182-86492:-1
so has part: feature:86314-86492:-1:exon
so has part: feature:79476-79590:-1:exon
so has part: feature:79213-79332:-1:exon
so has part: feature:77825-77911:-1:exon
so has part: feature:77670-77757:-1:exon
so has part: feature:77483-77561:-1:exon
so has part: feature:77252-77333:-1:exon
so has part: feature:76904-76989:-1:exon
so has part: feature:74743-74835:-1:exon
so has part: feature:74421-74651:-1:exon
so has part: feature:74056-74203:-1:exon
so has part: feature:73304-73454:-1:exon
so has part: feature:72497-72605:-1:exon
so has part: feature:72283-72417:-1:exon
so has part: feature:71993-72176:-1:exon
so has part: feature:71705-71839:-1:exon
so has part: feature:71442-71621:-1:exon
so has part: feature:71059-71205:-1:exon
so has part: feature:70796-70876:-1:exon
so has part: feature:70086-70244:-1:exon
so has part: feature:69182-69390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86314-86492:-1:exon

position:86314:-1
position: 86314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79476-79590:-1:exon

position:79476:-1
position: 79476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79590:-1
position: 79590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79213-79332:-1:exon

position:79213:-1
position: 79213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79332:-1
position: 79332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77825-77911:-1:exon

position:77825:-1
position: 77825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77911:-1
position: 77911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77670-77757:-1:exon

position:77670:-1
position: 77670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77757:-1
position: 77757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:77483-77561:-1:exon

position:77483:-1
position: 77483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77561:-1
position: 77561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:77252-77333:-1:exon

position:77252:-1
position: 77252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77333:-1
position: 77333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:76904-76989:-1:exon

position:76904:-1
position: 76904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76989:-1
position: 76989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:74743-74835:-1:exon

position:74743:-1
position: 74743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74835:-1
position: 74835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:74421-74651:-1:exon

position:74421:-1
position: 74421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74651:-1
position: 74651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:74056-74203:-1:exon

position:74056:-1
position: 74056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74203:-1
position: 74203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:73304-73454:-1:exon

position:73304:-1
position: 73304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73454:-1
position: 73454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:72497-72605:-1:exon

position:72497:-1
position: 72497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72605:-1
position: 72605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:72283-72417:-1:exon

position:72283:-1
position: 72283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72417:-1
position: 72417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:71993-72176:-1:exon

position:71993:-1
position: 71993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72176:-1
position: 72176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:71705-71839:-1:exon

position:71705:-1
position: 71705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71839:-1
position: 71839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:71442-71621:-1:exon

position:71442:-1
position: 71442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71621:-1
position: 71621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:71059-71205:-1:exon

position:71059:-1
position: 71059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71205:-1
position: 71205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:70796-70876:-1:exon

position:70796:-1
position: 70796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70876:-1
position: 70876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:70086-70244:-1:exon

position:70086:-1
position: 70086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70244:-1
position: 70244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:69182-69390:-1:exon

position:69390:-1
position: 69390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACTN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ACTN4
inference: similar to AA sequence (same species):RefSeq:NP_001382966.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution, 4 frameshifts compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: alpha-actinin-4
translation: MVDYHSAGQPYPYGGNGPGPNGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIRRTIPWLEDRSPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINTGWQHLEQAEKGYEEWLLNEIRRLEPLDHLAEKFRQKASIHEAWTEGKEAMLKQKDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDVLGSLTHSRREALEKTEKQLETIDELHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLIAAHDQFKATLPDADREREAILGIQREAQRIADLHSIKLSGNNPYTSVTPQVINSKWERVQQLVPTRDRALQDEQSRQQCNERLRRQFAGQANIVGPWMQTKMEEIGRISIEMHGTLEDQLQHLKHYEQSIVDYKPNLELLEQQHQLVQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKDHCGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSLVDPNGSGSVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDKNYITAEELRRELPPEQAEYCIARMAPYRGPDAAPGALDYKSFSTALYGESDL
SIO_010081: ACTN4
subclass of: SO_0000673
so part of: ACTN4
location: complement(join(69231..69390,70086..70244,70796..70876,71059..71205,71442..71621,71705..71839,71993..72176,72283..72417,72497..72605,73304..73454,74056..74203,74421..74651,74743..74835,76904..76989,77252..77333,77483..77561,77670..77757,77825..77911,79213..79332,79476..79590,86314..86454))
location: region:69231-86454:-1
so has part: feature:86314-86454:-1:exon
so has part: feature:79476-79590:-1:exon
so has part: feature:79213-79332:-1:exon
so has part: feature:77825-77911:-1:exon
so has part: feature:77670-77757:-1:exon
so has part: feature:77483-77561:-1:exon
so has part: feature:77252-77333:-1:exon
so has part: feature:76904-76989:-1:exon
so has part: feature:74743-74835:-1:exon
so has part: feature:74421-74651:-1:exon
so has part: feature:74056-74203:-1:exon
so has part: feature:73304-73454:-1:exon
so has part: feature:72497-72605:-1:exon
so has part: feature:72283-72417:-1:exon
so has part: feature:71993-72176:-1:exon
so has part: feature:71705-71839:-1:exon
so has part: feature:71442-71621:-1:exon
so has part: feature:71059-71205:-1:exon
so has part: feature:70796-70876:-1:exon
so has part: feature:70086-70244:-1:exon
so has part: feature:69231-69390:-1:exon

NP_001382966.1
type: Protein
SIO_000068: ncbiprotein

position:69231:-1
position: 69231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86454:-1
position: 86454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86314-86454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79476-79590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79213-79332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77825-77911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77670-77757:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77483-77561:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77252-77333:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76904-76989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74743-74835:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:74421-74651:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:74056-74203:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:73304-73454:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:72497-72605:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72283-72417:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:71993-72176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71705-71839:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71442-71621:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71059-71205:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:70796-70876:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70086-70244:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:69231-69390:-1:exon

ACTN4
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ACTN4
note: propagated from UniProtKB/Swiss-Prot (Q90734.1); Region: Actin-binding
SIO_010081: ACTN4
subclass of: SO_0000673
so part of: ACTN4
location: complement(join(76925..76989,77252..77333,77483..77561,77670..77757,77825..77911,79213..79332,79476..79590,86314..86454))
location: region:76925-86454:-1
so has part: feature:86314-86454:-1:exon
so has part: feature:79476-79590:-1:exon
so has part: feature:79213-79332:-1:exon
so has part: feature:77825-77911:-1:exon
so has part: feature:77670-77757:-1:exon
so has part: feature:77483-77561:-1:exon
so has part: feature:77252-77333:-1:exon
so has part: feature:76925-76989:-1:exon

position:76925:-1
position: 76925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86314-86454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79476-79590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79213-79332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77825-77911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77670-77757:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77483-77561:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77252-77333:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76925-76989:-1:exon

ACTN4
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ACTN4
note: propagated from UniProtKB/Swiss-Prot (Q90734.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: ACTN4
subclass of: SO_0000673
so part of: ACTN4
location: complement(86374..86454)
location: region:86374-86454:-1
so has part: feature:86374-86454:-1:exon

position:86374:-1
position: 86374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86374-86454:-1:exon

ACTN4
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ACTN4
note: propagated from UniProtKB/Swiss-Prot (Q90734.1); Region: Spectrin 1. /evidence=ECO:0000255
SIO_010081: ACTN4
subclass of: SO_0000673
so part of: ACTN4
location: complement(join(74138..74203,74421..74651,74743..74778))
location: region:74138-74778:-1
so has part: feature:74743-74778:-1:exon
so has part: feature:74421-74651:-1:exon
so has part: feature:74138-74203:-1:exon

position:74138:-1
position: 74138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74778:-1
position: 74778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74743-74778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74421-74651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74138-74203:-1:exon

ACTN4
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ACTN4
note: propagated from UniProtKB/Swiss-Prot (Q90734.1); Region: Spectrin 2. /evidence=ECO:0000255
SIO_010081: ACTN4
subclass of: SO_0000673
so part of: ACTN4
location: complement(join(72415..72417,72497..72605,73304..73454,74056..74110))
location: region:72415-74110:-1
so has part: feature:74056-74110:-1:exon
so has part: feature:73304-73454:-1:exon
so has part: feature:72497-72605:-1:exon
so has part: feature:72415-72417:-1:exon

position:72415:-1
position: 72415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74110:-1
position: 74110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74056-74110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73304-73454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72497-72605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72415-72417:-1:exon

ACTN4
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ACTN4
note: propagated from UniProtKB/Swiss-Prot (Q90734.1); Region: Spectrin 3. /evidence=ECO:0000255
SIO_010081: ACTN4
subclass of: SO_0000673
so part of: ACTN4
location: complement(join(71793..71839,71993..72176,72283..72387))
location: region:71793-72387:-1
so has part: feature:72283-72387:-1:exon
so has part: feature:71993-72176:-1:exon
so has part: feature:71793-71839:-1:exon

position:71793:-1
position: 71793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72387:-1
position: 72387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72283-72387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71993-72176:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71793-71839:-1:exon

ACTN4
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ACTN4
note: propagated from UniProtKB/Swiss-Prot (Q90734.1); Region: Spectrin 4. /evidence=ECO:0000255
SIO_010081: ACTN4
subclass of: SO_0000673
so part of: ACTN4
location: complement(join(71135..71205,71442..71621,71705..71765))
location: region:71135-71765:-1
so has part: feature:71705-71765:-1:exon
so has part: feature:71442-71621:-1:exon
so has part: feature:71135-71205:-1:exon

position:71135:-1
position: 71135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71765:-1
position: 71765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71705-71765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71442-71621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71135-71205:-1:exon

EIF3K
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: EIF3K
note: eukaryotic translation initiation factor 3 subunit K; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(87120..89303)
location: region:87120-89303:-1
so has part: feature:87120-89303:-1:exon
subclass of: SO_0000010

101750374
type: Gene
SIO_000068: ncbigene

position:87120:-1
position: 87120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89303:-1
position: 89303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87120-89303:-1:exon

EIF3K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: EIF3K
product: eukaryotic translation initiation factor 3 subunit K
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001391997.2
SIO_010081: EIF3K
subclass of: SO_0000673
so part of: EIF3K
location: complement(join(87120..87215,87302..87427,87505..87582,87672..87738,87811..87885,88670..88790,88920..89018,89210..89303))
location: region:87120-89303:-1
so has part: feature:89210-89303:-1:exon
so has part: feature:88920-89018:-1:exon
so has part: feature:88670-88790:-1:exon
so has part: feature:87811-87885:-1:exon
so has part: feature:87672-87738:-1:exon
so has part: feature:87505-87582:-1:exon
so has part: feature:87302-87427:-1:exon
so has part: feature:87120-87215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89210-89303:-1:exon

position:89210:-1
position: 89210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88920-89018:-1:exon

position:88920:-1
position: 88920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89018:-1
position: 89018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88670-88790:-1:exon

position:88670:-1
position: 88670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88790:-1
position: 88790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87811-87885:-1:exon

position:87811:-1
position: 87811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87885:-1
position: 87885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:87672-87738:-1:exon

position:87672:-1
position: 87672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87738:-1
position: 87738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:87505-87582:-1:exon

position:87505:-1
position: 87505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87582:-1
position: 87582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:87302-87427:-1:exon

position:87302:-1
position: 87302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87427:-1
position: 87427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87120-87215:-1:exon

position:87215:-1
position: 87215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EIF3K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: EIF3K
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit K
translation: MALFEQMRANVGKLLRGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGELLETCHFQSFWQALDENMELLDGIAGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSEAQLKVWMSKYGWTEPEPGKVFICNQEESIKPKNIVEKIDFDSVSSIMASSL
SIO_010081: EIF3K
subclass of: SO_0000673
so part of: EIF3K
location: complement(join(87184..87215,87302..87427,87505..87582,87672..87738,87811..87885,88670..88790,88920..89018,89210..89268))
location: region:87184-89268:-1
so has part: feature:89210-89268:-1:exon
so has part: feature:88920-89018:-1:exon
so has part: feature:88670-88790:-1:exon
so has part: feature:87811-87885:-1:exon
so has part: feature:87672-87738:-1:exon
so has part: feature:87505-87582:-1:exon
so has part: feature:87302-87427:-1:exon
so has part: feature:87184-87215:-1:exon

NP_001378926.1
type: Protein
SIO_000068: ncbiprotein

position:87184:-1
position: 87184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89268:-1
position: 89268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89210-89268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88920-89018:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88670-88790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87811-87885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87672-87738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87505-87582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87302-87427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87184-87215:-1:exon

LOC107055388
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107055388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89505..99655
location: region:89505-99655:1
so has part: feature:89505-99655:1:exon
subclass of: SO_0000010

107055388
type: Gene
SIO_000068: ncbigene

position:89505:1
position: 89505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99655:1
position: 99655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89505-99655:1:exon

LOC107055388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107055388
product: mitogen-activated protein kinase kinase kinase kinase 1-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040655119.2
SIO_010081: LOC107055388
subclass of: SO_0000673
so part of: LOC107055388
location: join(89505..90294,90745..90802,91118..91208,91312..91376,91471..91526,91621..91668,91791..91833,92241..92313,92412..92543,92639..92701,92791..92872,92968..93084,93478..93556,93666..93715,93823..93881,94036..94080,94167..94190,94288..94330,94428..94605,94733..94794,94893..94977,95071..95147,95248..95308,95387..95492,95941..95999,96083..96186,96911..97088,97663..97731,98968..99048,99141..99211,99310..99365,99476..99655)
location: region:89505-99655:1
so has part: feature:89505-90294:1:exon
so has part: feature:90745-90802:1:exon
so has part: feature:91118-91208:1:exon
so has part: feature:91312-91376:1:exon
so has part: feature:91471-91526:1:exon
so has part: feature:91621-91668:1:exon
so has part: feature:91791-91833:1:exon
so has part: feature:92241-92313:1:exon
so has part: feature:92412-92543:1:exon
so has part: feature:92639-92701:1:exon
so has part: feature:92791-92872:1:exon
so has part: feature:92968-93084:1:exon
so has part: feature:93478-93556:1:exon
so has part: feature:93666-93715:1:exon
so has part: feature:93823-93881:1:exon
so has part: feature:94036-94080:1:exon
so has part: feature:94167-94190:1:exon
so has part: feature:94288-94330:1:exon
so has part: feature:94428-94605:1:exon
so has part: feature:94733-94794:1:exon
so has part: feature:94893-94977:1:exon
so has part: feature:95071-95147:1:exon
so has part: feature:95248-95308:1:exon
so has part: feature:95387-95492:1:exon
so has part: feature:95941-95999:1:exon
so has part: feature:96083-96186:1:exon
so has part: feature:96911-97088:1:exon
so has part: feature:97663-97731:1:exon
so has part: feature:98968-99048:1:exon
so has part: feature:99141-99211:1:exon
so has part: feature:99310-99365:1:exon
so has part: feature:99476-99655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89505-90294:1:exon

position:90294:1
position: 90294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90745-90802:1:exon

position:90745:1
position: 90745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90802:1
position: 90802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91118-91208:1:exon

position:91118:1
position: 91118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91208:1
position: 91208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91312-91376:1:exon

position:91312:1
position: 91312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91376:1
position: 91376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:91471-91526:1:exon

position:91471:1
position: 91471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91526:1
position: 91526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91621-91668:1:exon

position:91621:1
position: 91621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91668:1
position: 91668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91791-91833:1:exon

position:91791:1
position: 91791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91833:1
position: 91833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:92241-92313:1:exon

position:92241:1
position: 92241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92313:1
position: 92313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92412-92543:1:exon

position:92412:1
position: 92412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92543:1
position: 92543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:92639-92701:1:exon

position:92639:1
position: 92639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92701:1
position: 92701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:92791-92872:1:exon

position:92791:1
position: 92791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92872:1
position: 92872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:92968-93084:1:exon

position:92968:1
position: 92968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93084:1
position: 93084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:93478-93556:1:exon

position:93478:1
position: 93478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93556:1
position: 93556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:93666-93715:1:exon

position:93666:1
position: 93666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93715:1
position: 93715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:93823-93881:1:exon

position:93823:1
position: 93823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93881:1
position: 93881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:94036-94080:1:exon

position:94036:1
position: 94036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94080:1
position: 94080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:94167-94190:1:exon

position:94167:1
position: 94167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94190:1
position: 94190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:94288-94330:1:exon

position:94288:1
position: 94288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94330:1
position: 94330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:94428-94605:1:exon

position:94428:1
position: 94428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94605:1
position: 94605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:94733-94794:1:exon

position:94733:1
position: 94733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94794:1
position: 94794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:94893-94977:1:exon

position:94893:1
position: 94893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94977:1
position: 94977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:95071-95147:1:exon

position:95071:1
position: 95071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95147:1
position: 95147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:95248-95308:1:exon

position:95248:1
position: 95248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95308:1
position: 95308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:95387-95492:1:exon

position:95387:1
position: 95387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95492:1
position: 95492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:95941-95999:1:exon

position:95941:1
position: 95941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95999:1
position: 95999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:96083-96186:1:exon

position:96083:1
position: 96083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96186:1
position: 96186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:96911-97088:1:exon

position:96911:1
position: 96911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97088:1
position: 97088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:97663-97731:1:exon

position:97663:1
position: 97663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97731:1
position: 97731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:98968-99048:1:exon

position:98968:1
position: 98968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99048:1
position: 99048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:99141-99211:1:exon

position:99141:1
position: 99141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99211:1
position: 99211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:99310-99365:1:exon

position:99310:1
position: 99310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99365:1
position: 99365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:99476-99655:1:exon

position:99476:1
position: 99476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107055388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107055388
product: mitogen-activated protein kinase kinase kinase kinase 1-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040655120.2
SIO_010081: LOC107055388
subclass of: SO_0000673
so part of: LOC107055388
location: join(89505..90294,90745..90802,91118..91208,91312..91376,91471..91526,91621..91668,91791..91833,92241..92313,92412..92543,92639..92701,92791..92872,92968..93084,93478..93556,93666..93715,93823..93881,94036..94080,94167..94190,94291..94330,94428..94605,94733..94794,94893..94977,95071..95147,95248..95308,95387..95492,95941..95999,96083..96186,96911..97088,97663..97731,98968..99048,99141..99211,99310..99365,99476..99617)
location: region:89505-99617:1
so has part: feature:89505-90294:1:exon
so has part: feature:90745-90802:1:exon
so has part: feature:91118-91208:1:exon
so has part: feature:91312-91376:1:exon
so has part: feature:91471-91526:1:exon
so has part: feature:91621-91668:1:exon
so has part: feature:91791-91833:1:exon
so has part: feature:92241-92313:1:exon
so has part: feature:92412-92543:1:exon
so has part: feature:92639-92701:1:exon
so has part: feature:92791-92872:1:exon
so has part: feature:92968-93084:1:exon
so has part: feature:93478-93556:1:exon
so has part: feature:93666-93715:1:exon
so has part: feature:93823-93881:1:exon
so has part: feature:94036-94080:1:exon
so has part: feature:94167-94190:1:exon
so has part: feature:94291-94330:1:exon
so has part: feature:94428-94605:1:exon
so has part: feature:94733-94794:1:exon
so has part: feature:94893-94977:1:exon
so has part: feature:95071-95147:1:exon
so has part: feature:95248-95308:1:exon
so has part: feature:95387-95492:1:exon
so has part: feature:95941-95999:1:exon
so has part: feature:96083-96186:1:exon
so has part: feature:96911-97088:1:exon
so has part: feature:97663-97731:1:exon
so has part: feature:98968-99048:1:exon
so has part: feature:99141-99211:1:exon
so has part: feature:99310-99365:1:exon
so has part: feature:99476-99617:1:exon

position:99617:1
position: 99617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89505-90294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90745-90802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91118-91208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91312-91376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91471-91526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91621-91668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91791-91833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92241-92313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92412-92543:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92639-92701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92791-92872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92968-93084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93478-93556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93666-93715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93823-93881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94036-94080:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94167-94190:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:94291-94330:1:exon

position:94291:1
position: 94291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:94428-94605:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:94733-94794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:94893-94977:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:95071-95147:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:95248-95308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:95387-95492:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:95941-95999:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:96083-96186:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:96911-97088:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:97663-97731:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:98968-99048:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:99141-99211:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:99310-99365:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:99476-99617:1:exon

LOC107055388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107055388
product: mitogen-activated protein kinase kinase kinase kinase 1-like, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_046905080.1
SIO_010081: LOC107055388
subclass of: SO_0000673
so part of: LOC107055388
location: join(89505..89599,90745..90802,91118..91208,91312..91376,91471..91526,91621..91668,91791..91833,92241..92313,92412..92543,92639..92701,92791..92872,92968..93084,93478..93556,93666..93715,93823..93881,94036..94080,94167..94190,94288..94330,94428..94605,94733..94794,94893..94977,95071..95147,95248..95308,95387..95492,95941..95999,96083..96186,96911..97088,97663..97731,98968..99048,99141..99211,99310..99365,99476..99617)
location: region:89505-99617:1
so has part: feature:89505-89599:1:exon
so has part: feature:90745-90802:1:exon
so has part: feature:91118-91208:1:exon
so has part: feature:91312-91376:1:exon
so has part: feature:91471-91526:1:exon
so has part: feature:91621-91668:1:exon
so has part: feature:91791-91833:1:exon
so has part: feature:92241-92313:1:exon
so has part: feature:92412-92543:1:exon
so has part: feature:92639-92701:1:exon
so has part: feature:92791-92872:1:exon
so has part: feature:92968-93084:1:exon
so has part: feature:93478-93556:1:exon
so has part: feature:93666-93715:1:exon
so has part: feature:93823-93881:1:exon
so has part: feature:94036-94080:1:exon
so has part: feature:94167-94190:1:exon
so has part: feature:94288-94330:1:exon
so has part: feature:94428-94605:1:exon
so has part: feature:94733-94794:1:exon
so has part: feature:94893-94977:1:exon
so has part: feature:95071-95147:1:exon
so has part: feature:95248-95308:1:exon
so has part: feature:95387-95492:1:exon
so has part: feature:95941-95999:1:exon
so has part: feature:96083-96186:1:exon
so has part: feature:96911-97088:1:exon
so has part: feature:97663-97731:1:exon
so has part: feature:98968-99048:1:exon
so has part: feature:99141-99211:1:exon
so has part: feature:99310-99365:1:exon
so has part: feature:99476-99617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89505-89599:1:exon

position:89599:1
position: 89599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90745-90802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91118-91208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91312-91376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91471-91526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91621-91668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91791-91833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92241-92313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92412-92543:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92639-92701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92791-92872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92968-93084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93478-93556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93666-93715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93823-93881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94036-94080:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94167-94190:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:94288-94330:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:94428-94605:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:94733-94794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:94893-94977:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:95071-95147:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:95248-95308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:95387-95492:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:95941-95999:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:96083-96186:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:96911-97088:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:97663-97731:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:98968-99048:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:99141-99211:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:99310-99365:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:99476-99617:1:exon

LOC107055388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107055388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase kinase 1 isoform X1
translation: MGSRSSCGALGRTGIPWGLAAPRPRNASVGVPLPALWFGTGGPPPDARVPMGCASVSPSAALPCGELGGGGGRQLRAAAAATAGVEGGASRGGGGTAMDPRLLRIAARDPQEDFEVLQRLGGGTYGDVFKARSKATGELAAIKVVKMEADDDCATIQQEILMIRSCQHPNIVAYFGSYSWCNKLWICMELCGGGSLQDIYNVTGPLSEPQIAYVCRETLEGLSYLHCQGKIHRDIKGANILINDSGEVKLADFGIAAQISATFARRMSFIGTPYWMAPEVAAVELKGGYNELCDVWSVGITAVELAELQPPLFDVHPLRVLFLMSKSGYQPPKLKDKAKWTPAFHNFVKVTLTKNPKKRPSATKMLSHQFVAQPGLSRTLTLELLERVHDPERGPGGCDPDEEEPELPPPVPRRIHSTHRPHPGGRCDADLELHPPSRAPCWRKEGDLVVPSAKPSSGRRGGGSEGSTRADASDSENDYDDVDIPTRCDANSSTLPADVPPPLPPKPKFRSGSAEAPPEDPLPRLPRRQFLEQPPPPALVRCASGPVGGPRPPPSTQGTALSASSDPMLYSDDRPLLPPKMEKSRKDRSLFRKVFDGCPLHVTAAATWTHPGTQDPHLILGAEEGIFTLNQSEREATLELLYHSRTSWLYVIGNVLMSVSGKTPQLYSHGLLGLYEQSRREQRPGGHLSPHRLLPRKNVTSTKIPDTKGCRTCCVARNAHTGCHYLCGALDAGVVLLQWYEPMQKFLLVKHFDFPLPSPLRVFEMLVSPMEEYPSVCIGVSPGPSPARPVLFHTINLNSLSSWFTRAGTEPSCPGPVQVTQLDSETVLVLLDRSVKVVTLQGAPARHPDVAFDVDVESVALSRSRIQAFWRHGVQVLQMGSVQLMEELRDQRWTFRLLSSQSTVVLETRPTDEPNAPSNIYIQD
SIO_010081: LOC107055388
subclass of: SO_0000673
so part of: LOC107055388
location: join(89905..90294,90745..90802,91118..91208,91312..91376,91471..91526,91621..91668,91791..91833,92241..92313,92412..92543,92639..92701,92791..92872,92968..93084,93478..93556,93666..93715,93823..93881,94036..94080,94167..94190,94288..94330,94428..94605,94733..94794,94893..94977,95071..95147,95248..95308,95387..95492,95941..95999,96083..96186,96911..97088,97663..97731,98968..99048,99141..99211,99310..99365,99476..99545)
location: region:89905-99545:1
so has part: feature:89905-90294:1:exon
so has part: feature:90745-90802:1:exon
so has part: feature:91118-91208:1:exon
so has part: feature:91312-91376:1:exon
so has part: feature:91471-91526:1:exon
so has part: feature:91621-91668:1:exon
so has part: feature:91791-91833:1:exon
so has part: feature:92241-92313:1:exon
so has part: feature:92412-92543:1:exon
so has part: feature:92639-92701:1:exon
so has part: feature:92791-92872:1:exon
so has part: feature:92968-93084:1:exon
so has part: feature:93478-93556:1:exon
so has part: feature:93666-93715:1:exon
so has part: feature:93823-93881:1:exon
so has part: feature:94036-94080:1:exon
so has part: feature:94167-94190:1:exon
so has part: feature:94288-94330:1:exon
so has part: feature:94428-94605:1:exon
so has part: feature:94733-94794:1:exon
so has part: feature:94893-94977:1:exon
so has part: feature:95071-95147:1:exon
so has part: feature:95248-95308:1:exon
so has part: feature:95387-95492:1:exon
so has part: feature:95941-95999:1:exon
so has part: feature:96083-96186:1:exon
so has part: feature:96911-97088:1:exon
so has part: feature:97663-97731:1:exon
so has part: feature:98968-99048:1:exon
so has part: feature:99141-99211:1:exon
so has part: feature:99310-99365:1:exon
so has part: feature:99476-99545:1:exon

XP_040511053.2
type: Protein
SIO_000068: ncbiprotein

position:89905:1
position: 89905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99545:1
position: 99545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89905-90294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90745-90802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91118-91208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91312-91376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91471-91526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91621-91668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91791-91833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92241-92313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92412-92543:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92639-92701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92791-92872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92968-93084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93478-93556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93666-93715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93823-93881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94036-94080:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94167-94190:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:94288-94330:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:94428-94605:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:94733-94794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:94893-94977:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:95071-95147:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:95248-95308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:95387-95492:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:95941-95999:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:96083-96186:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:96911-97088:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:97663-97731:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:98968-99048:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:99141-99211:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:99310-99365:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:99476-99545:1:exon

LOC107055388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107055388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase kinase 1 isoform X2
translation: MGSRSSCGALGRTGIPWGLAAPRPRNASVGVPLPALWFGTGGPPPDARVPMGCASVSPSAALPCGELGGGGGRQLRAAAAATAGVEGGASRGGGGTAMDPRLLRIAARDPQEDFEVLQRLGGGTYGDVFKARSKATGELAAIKVVKMEADDDCATIQQEILMIRSCQHPNIVAYFGSYSWCNKLWICMELCGGGSLQDIYNVTGPLSEPQIAYVCRETLEGLSYLHCQGKIHRDIKGANILINDSGEVKLADFGIAAQISATFARRMSFIGTPYWMAPEVAAVELKGGYNELCDVWSVGITAVELAELQPPLFDVHPLRVLFLMSKSGYQPPKLKDKAKWTPAFHNFVKVTLTKNPKKRPSATKMLSHQFVAQPGLSRTLTLELLERVHDPERGPGGCDPDEEEPELPPPVPRRIHSTHRPHPGGRCDADLELHPPSRAPCWRKEGDLVVPSAKPSSGRRGGGSEGSTRADASDSENDYDDVDIPTRCDANSTLPADVPPPLPPKPKFRSGSAEAPPEDPLPRLPRRQFLEQPPPPALVRCASGPVGGPRPPPSTQGTALSASSDPMLYSDDRPLLPPKMEKSRKDRSLFRKVFDGCPLHVTAAATWTHPGTQDPHLILGAEEGIFTLNQSEREATLELLYHSRTSWLYVIGNVLMSVSGKTPQLYSHGLLGLYEQSRREQRPGGHLSPHRLLPRKNVTSTKIPDTKGCRTCCVARNAHTGCHYLCGALDAGVVLLQWYEPMQKFLLVKHFDFPLPSPLRVFEMLVSPMEEYPSVCIGVSPGPSPARPVLFHTINLNSLSSWFTRAGTEPSCPGPVQVTQLDSETVLVLLDRSVKVVTLQGAPARHPDVAFDVDVESVALSRSRIQAFWRHGVQVLQMGSVQLMEELRDQRWTFRLLSSQSTVVLETRPTDEPNAPSNIYIQD
SIO_010081: LOC107055388
subclass of: SO_0000673
so part of: LOC107055388
location: join(89905..90294,90745..90802,91118..91208,91312..91376,91471..91526,91621..91668,91791..91833,92241..92313,92412..92543,92639..92701,92791..92872,92968..93084,93478..93556,93666..93715,93823..93881,94036..94080,94167..94190,94291..94330,94428..94605,94733..94794,94893..94977,95071..95147,95248..95308,95387..95492,95941..95999,96083..96186,96911..97088,97663..97731,98968..99048,99141..99211,99310..99365,99476..99545)
location: region:89905-99545:1
so has part: feature:89905-90294:1:exon
so has part: feature:90745-90802:1:exon
so has part: feature:91118-91208:1:exon
so has part: feature:91312-91376:1:exon
so has part: feature:91471-91526:1:exon
so has part: feature:91621-91668:1:exon
so has part: feature:91791-91833:1:exon
so has part: feature:92241-92313:1:exon
so has part: feature:92412-92543:1:exon
so has part: feature:92639-92701:1:exon
so has part: feature:92791-92872:1:exon
so has part: feature:92968-93084:1:exon
so has part: feature:93478-93556:1:exon
so has part: feature:93666-93715:1:exon
so has part: feature:93823-93881:1:exon
so has part: feature:94036-94080:1:exon
so has part: feature:94167-94190:1:exon
so has part: feature:94291-94330:1:exon
so has part: feature:94428-94605:1:exon
so has part: feature:94733-94794:1:exon
so has part: feature:94893-94977:1:exon
so has part: feature:95071-95147:1:exon
so has part: feature:95248-95308:1:exon
so has part: feature:95387-95492:1:exon
so has part: feature:95941-95999:1:exon
so has part: feature:96083-96186:1:exon
so has part: feature:96911-97088:1:exon
so has part: feature:97663-97731:1:exon
so has part: feature:98968-99048:1:exon
so has part: feature:99141-99211:1:exon
so has part: feature:99310-99365:1:exon
so has part: feature:99476-99545:1:exon

XP_040511054.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89905-90294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90745-90802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91118-91208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91312-91376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91471-91526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91621-91668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91791-91833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92241-92313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92412-92543:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92639-92701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92791-92872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92968-93084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93478-93556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93666-93715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93823-93881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94036-94080:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94167-94190:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:94291-94330:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:94428-94605:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:94733-94794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:94893-94977:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:95071-95147:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:95248-95308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:95387-95492:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:95941-95999:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:96083-96186:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:96911-97088:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:97663-97731:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:98968-99048:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:99141-99211:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:99310-99365:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:99476-99545:1:exon

LOC107055388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107055388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase kinase 1 isoform X3
translation: MEADDDCATIQQEILMIRSCQHPNIVAYFGSYSWCNKLWICMELCGGGSLQDIYNVTGPLSEPQIAYVCRETLEGLSYLHCQGKIHRDIKGANILINDSGEVKLADFGIAAQISATFARRMSFIGTPYWMAPEVAAVELKGGYNELCDVWSVGITAVELAELQPPLFDVHPLRVLFLMSKSGYQPPKLKDKAKWTPAFHNFVKVTLTKNPKKRPSATKMLSHQFVAQPGLSRTLTLELLERVHDPERGPGGCDPDEEEPELPPPVPRRIHSTHRPHPGGRCDADLELHPPSRAPCWRKEGDLVVPSAKPSSGRRGGGSEGSTRADASDSENDYDDVDIPTRCDANSSTLPADVPPPLPPKPKFRSGSAEAPPEDPLPRLPRRQFLEQPPPPALVRCASGPVGGPRPPPSTQGTALSASSDPMLYSDDRPLLPPKMEKSRKDRSLFRKVFDGCPLHVTAAATWTHPGTQDPHLILGAEEGIFTLNQSEREATLELLYHSRTSWLYVIGNVLMSVSGKTPQLYSHGLLGLYEQSRREQRPGGHLSPHRLLPRKNVTSTKIPDTKGCRTCCVARNAHTGCHYLCGALDAGVVLLQWYEPMQKFLLVKHFDFPLPSPLRVFEMLVSPMEEYPSVCIGVSPGPSPARPVLFHTINLNSLSSWFTRAGTEPSCPGPVQVTQLDSETVLVLLDRSVKVVTLQGAPARHPDVAFDVDVESVALSRSRIQAFWRHGVQVLQMGSVQLMEELRDQRWTFRLLSSQSTVVLETRPTDEPNAPSNIYIQD
SIO_010081: LOC107055388
subclass of: SO_0000673
so part of: LOC107055388
location: join(90793..90802,91118..91208,91312..91376,91471..91526,91621..91668,91791..91833,92241..92313,92412..92543,92639..92701,92791..92872,92968..93084,93478..93556,93666..93715,93823..93881,94036..94080,94167..94190,94288..94330,94428..94605,94733..94794,94893..94977,95071..95147,95248..95308,95387..95492,95941..95999,96083..96186,96911..97088,97663..97731,98968..99048,99141..99211,99310..99365,99476..99545)
location: region:90793-99545:1
so has part: feature:90793-90802:1:exon
so has part: feature:91118-91208:1:exon
so has part: feature:91312-91376:1:exon
so has part: feature:91471-91526:1:exon
so has part: feature:91621-91668:1:exon
so has part: feature:91791-91833:1:exon
so has part: feature:92241-92313:1:exon
so has part: feature:92412-92543:1:exon
so has part: feature:92639-92701:1:exon
so has part: feature:92791-92872:1:exon
so has part: feature:92968-93084:1:exon
so has part: feature:93478-93556:1:exon
so has part: feature:93666-93715:1:exon
so has part: feature:93823-93881:1:exon
so has part: feature:94036-94080:1:exon
so has part: feature:94167-94190:1:exon
so has part: feature:94288-94330:1:exon
so has part: feature:94428-94605:1:exon
so has part: feature:94733-94794:1:exon
so has part: feature:94893-94977:1:exon
so has part: feature:95071-95147:1:exon
so has part: feature:95248-95308:1:exon
so has part: feature:95387-95492:1:exon
so has part: feature:95941-95999:1:exon
so has part: feature:96083-96186:1:exon
so has part: feature:96911-97088:1:exon
so has part: feature:97663-97731:1:exon
so has part: feature:98968-99048:1:exon
so has part: feature:99141-99211:1:exon
so has part: feature:99310-99365:1:exon
so has part: feature:99476-99545:1:exon

XP_046761036.1
type: Protein
SIO_000068: ncbiprotein

position:90793:1
position: 90793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90793-90802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91118-91208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91312-91376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91471-91526:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91621-91668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91791-91833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92241-92313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92412-92543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92639-92701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92791-92872:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92968-93084:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93478-93556:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93666-93715:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93823-93881:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94036-94080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94167-94190:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94288-94330:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:94428-94605:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:94733-94794:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:94893-94977:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:95071-95147:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:95248-95308:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:95387-95492:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:95941-95999:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:96083-96186:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:96911-97088:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:97663-97731:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:98968-99048:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:99141-99211:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:99310-99365:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:99476-99545:1:exon

LOC101748756
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101748756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99713..170539)
location: region:99713-170539:-1
so has part: feature:99713-170539:-1:exon
subclass of: SO_0000010

101748756
type: Gene
SIO_000068: ncbigene

position:99713:-1
position: 99713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170539:-1
position: 170539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99713-170539:-1:exon

LOC101748756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101748756
product: ryanodine receptor 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons
transcript id: XM_040655096.1
SIO_010081: LOC101748756
subclass of: SO_0000673
so part of: LOC101748756
location: complement(join(99713..99924,100166..100217,100336..100436,100544..100608,100705..100861,101367..101501,101747..101893,102298..102358,102434..102564,102681..102723,103163..103293,103674..103928,104021..104107,104202..104370,104490..104560,104795..105952,107247..107434,107544..107625,108080..108184,109305..109433,109508..109596,109854..109934,110820..110837,111549..111622,112241..112317,112438..112517,113043..113142,113221..113298,113410..113461,113555..113661,113745..113841,113932..114044,114443..114580,115500..115559,115653..115823,116619..116633,117295..117387,117561..117648,118224..118464,119240..119554,120407..120537,120649..120730,121265..121503,122812..122872,122972..123021,123153..123274,123825..123892,124010..124125,124205..124328,125204..125279,125362..125439,125529..125669,126291..126380,126472..126550,127003..127166,127707..127847,127933..128023,129508..129728,130720..130889,131313..131433,131516..131627,132133..132319,132752..132887,133947..134041,134732..134864,134954..135068,136496..136769,138657..138803,139564..139675,140251..140451,141048..141960,143842..144068,145580..145666,147201..147363,148608..148768,149735..149861,150789..151196,152053..152261,154030..154204,154989..155191,155986..156134,158710..158869,159813..159896,159992..160095,160184..160288,160765..160982,161782..161974,162958..163199,163797..163930,164637..164755,165086..165196,166824..166983,168844..168963,170396..170539))
location: region:99713-170539:-1
so has part: feature:170396-170539:-1:exon
so has part: feature:168844-168963:-1:exon
so has part: feature:166824-166983:-1:exon
so has part: feature:165086-165196:-1:exon
so has part: feature:164637-164755:-1:exon
so has part: feature:163797-163930:-1:exon
so has part: feature:162958-163199:-1:exon
so has part: feature:161782-161974:-1:exon
so has part: feature:160765-160982:-1:exon
so has part: feature:160184-160288:-1:exon
so has part: feature:159992-160095:-1:exon
so has part: feature:159813-159896:-1:exon
so has part: feature:158710-158869:-1:exon
so has part: feature:155986-156134:-1:exon
so has part: feature:154989-155191:-1:exon
so has part: feature:154030-154204:-1:exon
so has part: feature:152053-152261:-1:exon
so has part: feature:150789-151196:-1:exon
so has part: feature:149735-149861:-1:exon
so has part: feature:148608-148768:-1:exon
so has part: feature:147201-147363:-1:exon
so has part: feature:145580-145666:-1:exon
so has part: feature:143842-144068:-1:exon
so has part: feature:141048-141960:-1:exon
so has part: feature:140251-140451:-1:exon
so has part: feature:139564-139675:-1:exon
so has part: feature:138657-138803:-1:exon
so has part: feature:136496-136769:-1:exon
so has part: feature:134954-135068:-1:exon
so has part: feature:134732-134864:-1:exon
so has part: feature:133947-134041:-1:exon
so has part: feature:132752-132887:-1:exon
so has part: feature:132133-132319:-1:exon
so has part: feature:131516-131627:-1:exon
so has part: feature:131313-131433:-1:exon
so has part: feature:130720-130889:-1:exon
so has part: feature:129508-129728:-1:exon
so has part: feature:127933-128023:-1:exon
so has part: feature:127707-127847:-1:exon
so has part: feature:127003-127166:-1:exon
so has part: feature:126472-126550:-1:exon
so has part: feature:126291-126380:-1:exon
so has part: feature:125529-125669:-1:exon
so has part: feature:125362-125439:-1:exon
so has part: feature:125204-125279:-1:exon
so has part: feature:124205-124328:-1:exon
so has part: feature:124010-124125:-1:exon
so has part: feature:123825-123892:-1:exon
so has part: feature:123153-123274:-1:exon
so has part: feature:122972-123021:-1:exon
so has part: feature:122812-122872:-1:exon
so has part: feature:121265-121503:-1:exon
so has part: feature:120649-120730:-1:exon
so has part: feature:120407-120537:-1:exon
so has part: feature:119240-119554:-1:exon
so has part: feature:118224-118464:-1:exon
so has part: feature:117561-117648:-1:exon
so has part: feature:117295-117387:-1:exon
so has part: feature:116619-116633:-1:exon
so has part: feature:115653-115823:-1:exon
so has part: feature:115500-115559:-1:exon
so has part: feature:114443-114580:-1:exon
so has part: feature:113932-114044:-1:exon
so has part: feature:113745-113841:-1:exon
so has part: feature:113555-113661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170396-170539:-1:exon

position:170396:-1
position: 170396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168844-168963:-1:exon

position:168844:-1
position: 168844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168963:-1
position: 168963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166824-166983:-1:exon

position:166824:-1
position: 166824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166983:-1
position: 166983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:165086-165196:-1:exon

position:165086:-1
position: 165086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165196:-1
position: 165196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:164637-164755:-1:exon

position:164637:-1
position: 164637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164755:-1
position: 164755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:163797-163930:-1:exon

position:163797:-1
position: 163797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163930:-1
position: 163930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162958-163199:-1:exon

position:162958:-1
position: 162958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163199:-1
position: 163199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:161782-161974:-1:exon

position:161782:-1
position: 161782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161974:-1
position: 161974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:160765-160982:-1:exon

position:160765:-1
position: 160765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160982:-1
position: 160982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:160184-160288:-1:exon

position:160184:-1
position: 160184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160288:-1
position: 160288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:159992-160095:-1:exon

position:159992:-1
position: 159992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160095:-1
position: 160095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:159813-159896:-1:exon

position:159813:-1
position: 159813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159896:-1
position: 159896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:158710-158869:-1:exon

position:158710:-1
position: 158710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158869:-1
position: 158869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:155986-156134:-1:exon

position:155986:-1
position: 155986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156134:-1
position: 156134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:154989-155191:-1:exon

position:154989:-1
position: 154989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155191:-1
position: 155191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:154030-154204:-1:exon

position:154030:-1
position: 154030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154204:-1
position: 154204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:152053-152261:-1:exon

position:152053:-1
position: 152053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152261:-1
position: 152261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:150789-151196:-1:exon

position:150789:-1
position: 150789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151196:-1
position: 151196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:149735-149861:-1:exon

position:149735:-1
position: 149735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149861:-1
position: 149861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:148608-148768:-1:exon

position:148608:-1
position: 148608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148768:-1
position: 148768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:147201-147363:-1:exon

position:147201:-1
position: 147201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147363:-1
position: 147363
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:145580-145666:-1:exon

position:145580:-1
position: 145580
reference: sequence
type: ReverseStrandPosition
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position:145666:-1
position: 145666
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:143842-144068:-1:exon

position:143842:-1
position: 143842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144068:-1
position: 144068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:141048-141960:-1:exon

position:141048:-1
position: 141048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141960:-1
position: 141960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:140251-140451:-1:exon

position:140251:-1
position: 140251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140451:-1
position: 140451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:139564-139675:-1:exon

position:139564:-1
position: 139564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139675:-1
position: 139675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:138657-138803:-1:exon

position:138657:-1
position: 138657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138803:-1
position: 138803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:136496-136769:-1:exon

position:136496:-1
position: 136496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136769:-1
position: 136769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:134954-135068:-1:exon

position:134954:-1
position: 134954
reference: sequence
type: ReverseStrandPosition
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position:135068:-1
position: 135068
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:134732-134864:-1:exon

position:134732:-1
position: 134732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134864:-1
position: 134864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:133947-134041:-1:exon

position:133947:-1
position: 133947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134041:-1
position: 134041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:132752-132887:-1:exon

position:132752:-1
position: 132752
reference: sequence
type: ReverseStrandPosition
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position:132887:-1
position: 132887
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 33
SIO_000628: feature:132133-132319:-1:exon

position:132133:-1
position: 132133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132319:-1
position: 132319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:131516-131627:-1:exon

position:131516:-1
position: 131516
reference: sequence
type: ReverseStrandPosition
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position:131627:-1
position: 131627
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 35
SIO_000628: feature:131313-131433:-1:exon

position:131313:-1
position: 131313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131433:-1
position: 131433
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 36
SIO_000628: feature:130720-130889:-1:exon

position:130720:-1
position: 130720
reference: sequence
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position:130889:-1
position: 130889
reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:129508-129728:-1:exon

position:129508:-1
position: 129508
reference: sequence
type: ReverseStrandPosition
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position:129728:-1
position: 129728
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 38
SIO_000628: feature:127933-128023:-1:exon

position:127933:-1
position: 127933
reference: sequence
type: ReverseStrandPosition
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position:128023:-1
position: 128023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:127707-127847:-1:exon

position:127707:-1
position: 127707
reference: sequence
type: ReverseStrandPosition
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position:127847:-1
position: 127847
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 40
SIO_000628: feature:127003-127166:-1:exon

position:127003:-1
position: 127003
reference: sequence
type: ReverseStrandPosition
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position:127166:-1
position: 127166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:126472-126550:-1:exon

position:126472:-1
position: 126472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126550:-1
position: 126550
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 42
SIO_000628: feature:126291-126380:-1:exon

position:126291:-1
position: 126291
reference: sequence
type: ReverseStrandPosition
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position:126380:-1
position: 126380
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 43
SIO_000628: feature:125529-125669:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 44
SIO_000628: feature:125362-125439:-1:exon

position:125362:-1
position: 125362
reference: sequence
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position:125439:-1
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reference: sequence
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urn:…
SIO_000300: 45
SIO_000628: feature:125204-125279:-1:exon

position:125204:-1
position: 125204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125279:-1
position: 125279
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 46
SIO_000628: feature:124205-124328:-1:exon

position:124205:-1
position: 124205
reference: sequence
type: ReverseStrandPosition
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position:124328:-1
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reference: sequence
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LOC101748756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101748756
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ryanodine receptor 1 isoform X1
translation: MAEGDGEDDVQFLRTDDEVVLQCTTTLLKEQLKLCLAAEGFGNRLCFLEPTSNAQNVPPDLAVCCFVLEQSLSVRALQEMLANCAESGGEVGGQRARGRGSKGTGAERALRPIASLIRGNRTNCALFSTNLDWLVSKLDRLEASSGILEVLYCVLIESPEVLNIIQENHIKSIISLLDKHGRNHKVLDVLCSLCVCNAVAVRSNQNLITENLLPRRDLLLQTGLVSYVSSIRPNIFLGTHEGSTQYPRWYFEVAVDHVEPFVTAQPTHLRVGWAMAEGYSPYPGGGEGWGGNGAGDDLYSFAFDGLHLWAGGVPRSAPSPQQHILAAGDVVSCCLDLSVPTISFRLNGSPVLGMFENFNRDALFFPVVSFSAGVRLRFLLGGRHGDFQFLPPPGYSPCAEALLPRERLRLEPIKAYRGDGPPPHCLLGPTKALPHTAFTPCPVDTAQIVLPPHLERIREKLAENIHELWALTRIEQGWTYGPIRDDAEQLHPCLLDFHSLPEPERNYNLQMSGETLKTLLALGCHVGMADEKAEENLKKIKLPKSYMMCNGYKPAPLDLAHVRLTPAQLTLVDRLAENAHNVWARDRVQQGWTYSIVQDIKNKRNPRLVPYSLLDERTKKTNRDSLCEAVRTLIGYGYNIEPPDQESPAQGTPHGPDKMRIFRAERSYAVRTGKWYFEFEAVTTGEMRVGWARPHIRPDVELGADDLAYVFNGHRAQRWHVGGEAFGRSWQAGDVVGCMIDLNESHISFTLNGETLISDGGSEVAFRDFEVGEGFVPVCSLALDQAGRLNLGQDVGSLRFFTICGLQEGFEPFAINMKRPIALWVSKSLPQFGPIDPQDPELEVTRTDGTVDAPPCLRLSRRTSGSPPAPPQLLFLRLSLPVQFQPHFRCPPGTTPLPQTPPEPPDDDDGGLEPLSEFERLRRSAGVRNADGEGGAGGGGEGEKSPGGTPGNAPPPPRETPRGENEKDATTEKGKTRRGFLFKARKAAFAPPPALPAVPRLEEDVVPDERDDPDVIMNSTTFYFSVRIFAGQDPSHVWVGWVTPDFHQYDPNFDLSRVRTVTVTMGDDRGNVHDSIKRSNCYMVWGGEFGAGAPQTRSHSDAVIGCLVDVATGLMTFTANGKEINTFFQVEPNTKLFPAVFVLPSSPNVVQFELGKLKNILPISAALFSSERSNAEPQCPPRLCIQRLTAVTWSRMAAEALPVQTGRAADGMGWAVRCSEPRLMMALHIPEENRCMDIMELSERRELLRFHWHTLKLYCAVCALGNTRVAHALCSHVDPSQLLFAIESPELPGPLRAGYYELLLAVHLEQGVRARASMSAEFIVPMDEASRSVALFPGPGRVPGPPGVGLRACLRPRPHFAEPCFVRPPDGRALLGPAIPLRALGRRAIRMLREAVEGGGPHARDPVGGSVEFQLVPVLKLVSALLAVGALRDREVRKVLRMIEPRVFGGGDGPREEERRRRRRRRRRRRKAVEAGEEDGDDEEEAEDAEDGGEEEEEEEEDEDEDEEEEAEEAEEEEEDGPEEGLLQMKLPESVKLQMCNLLQFFCDQELQHRVEAIVAFSERHVERLQRDQRRRYGRLMGALTMSAAETARRTREFRSPPQEQINMLLQYKGGADEEECPVPQHIRDQLLQFHSDLLAHCGIELQGEEEEEEEDASLRQRLLALVQRVVGRRQKEEDEEEAAPPEPPVPRTLQELISQTMVHWAQESFIQSPELVRSMFSLLHRQYDGLGELVRALPKAYTISAHSVADTTALLECLGQIRSLLIVQMGPEEENLMIQSIGNIMNNKVFYQHPNLMRALGMHETVMQVMVSVLGGGETKEIRFPKMVTNCCRFLCYFCRISRQNQRSMFDHLGYLLENSSIGLGMRGSTPLDVAAASVIDNNELALALKEQDLEKVVTYLASCGLQSCPMLLSKGYPDIGWNPCGGERYLDFLRFAVFVNGESVEENANVVVRLLIRRPECFGPALRGEGGSGLLAAIEDAIKISEDPARDGPTVKKE…
SIO_010081: LOC101748756
subclass of: SO_0000673
so part of: LOC101748756
location: complement(join(99829..99924,100166..100217,100336..100436,100544..100608,100705..100861,101367..101501,101747..101893,102298..102358,102434..102564,102681..102723,103163..103293,103674..103928,104021..104107,104202..104370,104490..104560,104795..105952,107247..107434,107544..107625,108080..108184,109305..109433,109508..109596,109854..109934,110820..110837,111549..111622,112241..112317,112438..112517,113043..113142,113221..113298,113410..113461,113555..113661,113745..113841,113932..114044,114443..114580,115500..115559,115653..115823,116619..116633,117295..117387,117561..117648,118224..118464,119240..119554,120407..120537,120649..120730,121265..121503,122812..122872,122972..123021,123153..123274,123825..123892,124010..124125,124205..124328,125204..125279,125362..125439,125529..125669,126291..126380,126472..126550,127003..127166,127707..127847,127933..128023,129508..129728,130720..130889,131313..131433,131516..131627,132133..132319,132752..132887,133947..134041,134732..134864,134954..135068,136496..136769,138657..138803,139564..139675,140251..140451,141048..141960,143842..144068,145580..145666,147201..147363,148608..148768,149735..149861,150789..151196,152053..152261,154030..154204,154989..155191,155986..156134,158710..158869,159813..159896,159992..160095,160184..160288,160765..160982,161782..161974,162958..163199,163797..163930,164637..164755,165086..165196,166824..166983,168844..168963,170396..170440))
location: region:99829-170440:-1
so has part: feature:170396-170440:-1:exon
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so has part: feature:115500-115559:-1:exon
so has part: feature:114443-114580:-1:exon
so has part: feature:113932-114044:-1:exon
so has part: feature:113745-113841:-1:exon
so has part: feature:113555-113661:-1:exon

XP_040511030.1
type: Protein
SIO_000068: ncbiprotein

position:99829:-1
position: 99829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170440:-1
position: 170440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170396-170440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168844-168963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166824-166983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165086-165196:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164637-164755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163797-163930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162958-163199:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:161782-161974:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160765-160982:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160184-160288:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159992-160095:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159813-159896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:158710-158869:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155986-156134:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:154989-155191:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154030-154204:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:152053-152261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:150789-151196:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149735-149861:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:148608-148768:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:147201-147363:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:145580-145666:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:143842-144068:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:141048-141960:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:140251-140451:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:139564-139675:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:138657-138803:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:136496-136769:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:134954-135068:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:134732-134864:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:133947-134041:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:132752-132887:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:132133-132319:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:131516-131627:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:131313-131433:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:130720-130889:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:129508-129728:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:127933-128023:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:127707-127847:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:127003-127166:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:126472-126550:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:126291-126380:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:125529-125669:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:125362-125439:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:125204-125279:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:124205-124328:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:124010-124125:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:123825-123892:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:123153-123274:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:122972-123021:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:122812-122872:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:121265-121503:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:120649-120730:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:120407-120537:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:119240-119554:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:118224-118464:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:117561-117648:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:117295-117387:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:116619-116633:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:115653-115823:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:115500-115559:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:114443-114580:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:113932-114044:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:113745-113841:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:113555-113661:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:113410-113461:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:113221-113298:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:113043-113142:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:112438-112517:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:112241-112317:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:111549-111622:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:110820-110837:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:109854-109934:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:109508-109596:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:109305-109433:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:108080-108184:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:107544-107625:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:107247-107434:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:104795-105952:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:104490-104560:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:104202-104370:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:104021-104107:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:103674-103928:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:103163-103293:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:102681-102723:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:102434-102564:-1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:102298-102358:-1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:101747-101893:-1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:101367-101501:-1:exon

urn:…
SIO_000300: 90
SIO_000628: feature:100705-100861:-1:exon

urn:…
SIO_000300: 91
SIO_000628: feature:100544-100608:-1:exon

urn:…
SIO_000300: 92
SIO_000628: feature:100336-100436:-1:exon

urn:…
SIO_000300: 93
SIO_000628: feature:100166-100217:-1:exon

urn:…
SIO_000300: 94
SIO_000628: feature:99829-99924:-1:exon

SLC8A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SLC8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(172778..182324)
location: region:172778-182324:-1
so has part: feature:172778-182324:-1:exon
subclass of: SO_0000010

107057643
type: Gene
SIO_000068: ncbigene

position:172778:-1
position: 172778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182324:-1
position: 182324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172778-182324:-1:exon

SLC8A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SLC8A2
product: solute carrier family 8 member A2, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025144480.3
SIO_010081: SLC8A2
subclass of: SO_0000673
so part of: SLC8A2
location: complement(join(172778..173587,174643..174918,175510..175609,176183..176307,176672..176689,176813..176916,177643..179399,182256..182324))
location: region:172778-182324:-1
so has part: feature:182256-182324:-1:exon
so has part: feature:177643-179399:-1:exon
so has part: feature:176813-176916:-1:exon
so has part: feature:176672-176689:-1:exon
so has part: feature:176183-176307:-1:exon
so has part: feature:175510-175609:-1:exon
so has part: feature:174643-174918:-1:exon
so has part: feature:172778-173587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182256-182324:-1:exon

position:182256:-1
position: 182256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177643-179399:-1:exon

position:177643:-1
position: 177643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179399:-1
position: 179399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176813-176916:-1:exon

position:176813:-1
position: 176813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176916:-1
position: 176916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176672-176689:-1:exon

position:176672:-1
position: 176672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176689:-1
position: 176689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:176183-176307:-1:exon

position:176183:-1
position: 176183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176307:-1
position: 176307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:175510-175609:-1:exon

position:175510:-1
position: 175510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175609:-1
position: 175609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:174643-174918:-1:exon

position:174643:-1
position: 174643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174918:-1
position: 174918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:172778-173587:-1:exon

position:173587:-1
position: 173587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC8A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SLC8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/calcium exchanger 2
translation: MAAWRAALAAALLLAEPCAPEPPSEANGTCQGSNRCQPGVLLPVWQPDDPSFGDKAARAVVYFVAMMYMFLGVSIIADRFMASIEVITSKEKEITITKANGETSIGTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFQAGELGPGTIVGSAAFNMFVVIAVCVYVIPSGESRRIKHLRVFFVTAAWSIFAYIWLYLILAVISPGVVQVWEALLTLVFFPVCVVFAWAADKRLLFYKYVYKRYRADPRSGIIIGTEAELPKGIEMDGGFQPPERREAEGSAGGGASPALPASAEEKELDESRREVIQILKDLKQKHPERELEQLVDMANYYALLHQQKSRAFYRIQATRMMTGAGNVLRKHVAEFSKRSSALLEVPSDAEEEACSRIFFEPCLYHCLENCGAVTLSVACQHGAELNHTFYVDYKTEDGSAKAGSDYEYSEGTLIFKPGETQKELKIGIIDDDIFEEDEHFFVRLLNLRVGDAEGMFEADSAEHPKGRLVAPLVATVTILDDDHAGIFSFQERVVHVSECQGAVEVTVVRSSGARGTVLLPYRTVEGTARGGGVDYEDACGELEFRNDETAKTLQVKIVDDEEYEKRDNFFIELGPPRWLKRGISALLLNQAEGDRALSAEEEEARRIAEMGKPILGENCRLEVVIEESYDFKNTVDKLIKKTNLATVIGTHSWREQFLEAITVSAGEEEEEEDGREERLPSCFDYVMHFLTVFWKVLFACVPPTEYCNGWACFGVSILLIGVLTALIGDLAAHFGCTVGLKDSVNAVVFVALGTSIPDTFASKVAALQDHCADASIGNVTGSNAVNVFLGLGVAWSVAAIYWAAQGRDFEVQTGTLAFSVTLFTIFAFVCISVLMYRRRPHIGGELGGPRTPKVLTAALFLGLWLLYILFASLEAYCHIRGF
SIO_010081: SLC8A2
subclass of: SO_0000673
so part of: SLC8A2
location: complement(join(173211..173587,174643..174918,175510..175609,176183..176307,176672..176689,176813..176916,177643..179393))
location: region:173211-179393:-1
so has part: feature:177643-179393:-1:exon
so has part: feature:176813-176916:-1:exon
so has part: feature:176672-176689:-1:exon
so has part: feature:176183-176307:-1:exon
so has part: feature:175510-175609:-1:exon
so has part: feature:174643-174918:-1:exon
so has part: feature:173211-173587:-1:exon

XP_025000248.1
type: Protein
SIO_000068: ncbiprotein

position:173211:-1
position: 173211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179393:-1
position: 179393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177643-179393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176813-176916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176672-176689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176183-176307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175510-175609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174643-174918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173211-173587:-1:exon

KPTN
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: KPTN
note: kaptin, actin binding protein; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(182692..189904)
location: region:182692-189904:-1
so has part: feature:182692-189904:-1:exon
subclass of: SO_0000010

101752009
type: Gene
SIO_000068: ncbigene

position:182692:-1
position: 182692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189904:-1
position: 189904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182692-189904:-1:exon

KPTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KPTN
product: kaptin, actin binding protein
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001396671.1
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182692..183064,183725..183905,184665..184800,185657..185861,186942..187144,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189904))
location: region:182692-189904:-1
so has part: feature:189319-189904:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187144:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184800:-1:exon
so has part: feature:183725-183905:-1:exon
so has part: feature:182692-183064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189904:-1:exon

position:189319:-1
position: 189319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

position:188855:-1
position: 188855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188937:-1
position: 188937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

position:188389:-1
position: 188389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188473:-1
position: 188473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

position:188244:-1
position: 188244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188298:-1
position: 188298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

position:187920:-1
position: 187920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187995:-1
position: 187995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

position:187747:-1
position: 187747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187820:-1
position: 187820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187144:-1:exon

position:186942:-1
position: 186942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187144:-1
position: 187144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

position:185657:-1
position: 185657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185861:-1
position: 185861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184800:-1:exon

position:184665:-1
position: 184665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184800:-1
position: 184800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183905:-1:exon

position:183725:-1
position: 183725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183905:-1
position: 183905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:182692-183064:-1:exon

position:183064:-1
position: 183064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KPTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KPTN
product: kaptin, actin binding protein, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015272484.4
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182692..183064,183725..183886,184665..184800,185657..185861,186942..187051,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189614))
location: region:182692-189614:-1
so has part: feature:189319-189614:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187051:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184800:-1:exon
so has part: feature:183725-183886:-1:exon
so has part: feature:182692-183064:-1:exon

position:189614:-1
position: 189614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187051:-1:exon

position:187051:-1
position: 187051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183886:-1:exon

position:183886:-1
position: 183886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:182692-183064:-1:exon

KPTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KPTN
product: kaptin, actin binding protein, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655136.2
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182692..183064,183725..183905,184665..184800,185657..185861,186942..187051,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189614))
location: region:182692-189614:-1
so has part: feature:189319-189614:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187051:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184800:-1:exon
so has part: feature:183725-183905:-1:exon
so has part: feature:182692-183064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182692-183064:-1:exon

KPTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KPTN
product: kaptin, actin binding protein, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655135.2
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182692..183064,183725..183905,184665..184752,185657..185861,186942..187144,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189614))
location: region:182692-189614:-1
so has part: feature:189319-189614:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187144:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184752:-1:exon
so has part: feature:183725-183905:-1:exon
so has part: feature:182692-183064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184752:-1:exon

position:184752:-1
position: 184752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182692-183064:-1:exon

KPTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KPTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X2
translation: MAGPCPLVEDSCSRLPSQSNVYGLAALPGAGGLLAATLKGKVLHFRYQHLRHKLRPVARELQFTYIPVDAEIVSIGCFQKSAPKRGLVVGITFIKDSGDKPSPFLNIYCDYEPGCEFDLDSVAQSCLNLELRFTPLQLCHAEVHIGDRCDTVFLLSGTDPGIHLYRENEGLHQFEEQPLHELFPELQELPSSALWLDVCTVPSSRRRLTAVGCQSGYVRVAHVDQDTRAVLQSWSIQQDGPISTVLLFPLEEPDDDGDVAGGHRGADDVGPSAPGPEPTPHYSLLVASTIEMSVVYRDVLSRGLTEQLSLPGSDHHDAVLCAMLACTALDGGREVLLGTYGQELLCPIGAAVLRLPRPALRLSAAVDAALPRPGAGAVWGGPDGRWAAGGGRGVSAGAARPAAQPGAHSTAPEGAAAQGGGTEGTAEGGGGDRDPQVMGVDGVWGGGGHRKWGWKEEKRPPKGQKWPPSGGGTAPEWSEMGPKEKKWTQKRQK
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182790..183064,183725..183905,184665..184800,185657..185861,186942..187051,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189520))
location: region:182790-189520:-1
so has part: feature:189319-189520:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187051:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184800:-1:exon
so has part: feature:183725-183905:-1:exon
so has part: feature:182790-183064:-1:exon

XP_040511070.1
type: Protein
SIO_000068: ncbiprotein

position:182790:-1
position: 182790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189520:-1
position: 189520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182790-183064:-1:exon

KPTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KPTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X1
translation: MAGPCPLVEDSCSRLPSQSNVYGLAALPGAGGLLAATLKGKVLHFRYQHLRHKLRPVARELQFTYIPVDAEIVSIGCFQKSAPKRGLVVGITFIKDSGDKPSPFLNIYCDYEPGCEFDLDSVAQSCLNLELRFTPLQLCHAEVHIGDRCDTVFLLSGTDPGIHLYRENEGLHQFEEQPLHELFPELQELPSSVPVVSSQCPHTILVSPRLHRAPPLSPPLSRSALWLDVCTVPSSRRRLTAVGCQSGYVRVAHVDQDTRAVLQSWSIQQDGPISTVLLFPLEEPDDDGDVAGGHRGADDVGPSAPGPEPTPHYSLLVASTIEMSVVYRDHHDAVLCAMLACTALDGGREVLLGTYGQELLCPIGAAVLRLPRPALRLSAAVDAALPRPGAGAVWGGPDGRWAAGGGRGVSAGAARPAAQPGAHSTAPEGAAAQGGGTEGTAEGGGGDRDPQVMGVDGVWGGGGHRKWGWKEEKRPPKGQKWPPSGGGTAPEWSEMGPKEKKWTQKRQK
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182790..183064,183725..183905,184665..184752,185657..185861,186942..187144,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189520))
location: region:182790-189520:-1
so has part: feature:189319-189520:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187144:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184752:-1:exon
so has part: feature:183725-183905:-1:exon
so has part: feature:182790-183064:-1:exon

XP_040511069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182790-183064:-1:exon

KPTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KPTN
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: KICSTOR complex protein kaptin
translation: MAGPCPLVEDSCSRLPSQSNVYGLAALPGAGGLLAATLKGKVLHFRYQHLRHKLRPVARELQFTYIPVDAEIVSIGCFQKSAPKRGLVVGITFIKDSGDKPSPFLNIYCDYEPGCEFDLDSVAQSCLNLELRFTPLQLCHAEVHIGDRCDTVFLLSGTDPGIHLYRENEGLHQFEEQPLHELFPELQELPSSVPVVSSQCPHTILVSPRLHRAPPLSPPLSRSALWLDVCTVPSSRRRLTAVGCQSGYVRVAHVDQDTRAVLQSWSIQQDGPISTVLLFPLEEPDDDGDVAGGHRGADDVGPSAPGPEPTPHYSLLVASTIEMSVVYRDVLSRGLTEQLSLPGSDHHDAVLCAMLACTALDGGREVLLGTYGQELLCPIGAAVLRLPRPALRLSAAVDAALPRPGAGAVWGGPDGRWAAGGGRGVSAGAARPAAQPGAHSTAPEGAAAQGGGTEGTAEGGGGDRDPQVMGVDGVWGGGGHRKWGWKEEKRPPKGQKWPPSGGGTAPEWSEMGPKEKKWTQKRQK
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182790..183064,183725..183905,184665..184800,185657..185861,186942..187144,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189520))
location: region:182790-189520:-1
so has part: feature:189319-189520:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187144:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184800:-1:exon
so has part: feature:183725-183905:-1:exon
so has part: feature:182790-183064:-1:exon

NP_001383600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182790-183064:-1:exon

KPTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KPTN
product: kaptin, actin binding protein, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040655138.2
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182823..183064,183725..183886,184665..184752,185657..185861,186942..187144,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189614))
location: region:182823-189614:-1
so has part: feature:189319-189614:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187144:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184752:-1:exon
so has part: feature:183725-183886:-1:exon
so has part: feature:182823-183064:-1:exon

position:182823:-1
position: 182823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182823-183064:-1:exon

KPTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KPTN
product: kaptin, actin binding protein, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040655137.2
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182823..183064,183725..183886,184665..184800,185657..185861,186942..187144,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189614))
location: region:182823-189614:-1
so has part: feature:189319-189614:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187144:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184800:-1:exon
so has part: feature:183725-183886:-1:exon
so has part: feature:182823-183064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182823-183064:-1:exon

KPTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KPTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X5
translation: MAGPCPLVEDSCSRLPSQSNVYGLAALPGAGGLLAATLKGKVLHFRYQHLRHKLRPVARELQFTYIPVDAEIVSIGCFQKSAPKRGLVVGITFIKDSGDKPSPFLNIYCDYEPGCEFDLDSVAQSCLNLELRFTPLQLCHAEVHIGDRCDTVFLLSGTDPGIHLYRENEGLHQFEEQPLHELFPELQELPSSALWLDVCTVPSSRRRLTAVGCQSGYVRVAHVDQDTRAVLQSWSIQQDGPISTVLLFPLEEPDDDGDVAGGHRGADDVGPSAPGPEPTPHYSLLVASTIEMSVVYRDVLSRGLTEQLSLPGSDHHDAVLCAMLACTALDGGREVLLGTYGQELLCYAYRGRRCGFQLLWTRRFPGPVLALCGADLTGDGLREVAVGCLQGLHVLQHSLEPTAQRLKERLRREVARRAQQRGGEGTGTPK
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182960..183064,183725..183886,184665..184800,185657..185861,186942..187051,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189520))
location: region:182960-189520:-1
so has part: feature:189319-189520:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187051:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184800:-1:exon
so has part: feature:183725-183886:-1:exon
so has part: feature:182960-183064:-1:exon

XP_015127970.3
type: Protein
SIO_000068: ncbiprotein

position:182960:-1
position: 182960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182960-183064:-1:exon

KPTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KPTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X4
translation: MAGPCPLVEDSCSRLPSQSNVYGLAALPGAGGLLAATLKGKVLHFRYQHLRHKLRPVARELQFTYIPVDAEIVSIGCFQKSAPKRGLVVGITFIKDSGDKPSPFLNIYCDYEPGCEFDLDSVAQSCLNLELRFTPLQLCHAEVHIGDRCDTVFLLSGTDPGIHLYRENEGLHQFEEQPLHELFPELQELPSSVPVVSSQCPHTILVSPRLHRAPPLSPPLSRSALWLDVCTVPSSRRRLTAVGCQSGYVRVAHVDQDTRAVLQSWSIQQDGPISTVLLFPLEEPDDDGDVAGGHRGADDVGPSAPGPEPTPHYSLLVASTIEMSVVYRDHHDAVLCAMLACTALDGGREVLLGTYGQELLCYAYRGRRCGFQLLWTRRFPGPVLALCGADLTGDGLREVAVGCLQGLHVLQHSLEPTAQRLKERLRREVARRAQQRGGEGTGTPK
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182960..183064,183725..183886,184665..184752,185657..185861,186942..187144,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189520))
location: region:182960-189520:-1
so has part: feature:189319-189520:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187144:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184752:-1:exon
so has part: feature:183725-183886:-1:exon
so has part: feature:182960-183064:-1:exon

XP_040511072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182960-183064:-1:exon

KPTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KPTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KICSTOR complex protein kaptin isoform X3
translation: MAGPCPLVEDSCSRLPSQSNVYGLAALPGAGGLLAATLKGKVLHFRYQHLRHKLRPVARELQFTYIPVDAEIVSIGCFQKSAPKRGLVVGITFIKDSGDKPSPFLNIYCDYEPGCEFDLDSVAQSCLNLELRFTPLQLCHAEVHIGDRCDTVFLLSGTDPGIHLYRENEGLHQFEEQPLHELFPELQELPSSVPVVSSQCPHTILVSPRLHRAPPLSPPLSRSALWLDVCTVPSSRRRLTAVGCQSGYVRVAHVDQDTRAVLQSWSIQQDGPISTVLLFPLEEPDDDGDVAGGHRGADDVGPSAPGPEPTPHYSLLVASTIEMSVVYRDVLSRGLTEQLSLPGSDHHDAVLCAMLACTALDGGREVLLGTYGQELLCYAYRGRRCGFQLLWTRRFPGPVLALCGADLTGDGLREVAVGCLQGLHVLQHSLEPTAQRLKERLRREVARRAQQRGGEGTGTPK
SIO_010081: KPTN
subclass of: SO_0000673
so part of: KPTN
location: complement(join(182960..183064,183725..183886,184665..184800,185657..185861,186942..187144,187747..187820,187920..187995,188244..188298,188389..188473,188855..188937,189319..189520))
location: region:182960-189520:-1
so has part: feature:189319-189520:-1:exon
so has part: feature:188855-188937:-1:exon
so has part: feature:188389-188473:-1:exon
so has part: feature:188244-188298:-1:exon
so has part: feature:187920-187995:-1:exon
so has part: feature:187747-187820:-1:exon
so has part: feature:186942-187144:-1:exon
so has part: feature:185657-185861:-1:exon
so has part: feature:184665-184800:-1:exon
so has part: feature:183725-183886:-1:exon
so has part: feature:182960-183064:-1:exon

XP_040511071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189319-189520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188855-188937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188389-188473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188244-188298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187920-187995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187747-187820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186942-187144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185657-185861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184665-184800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183725-183886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:182960-183064:-1:exon

NAPA
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: NAPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190044..196225)
location: region:190044-196225:-1
so has part: feature:190044-196225:-1:exon
subclass of: SO_0000010

100858304
type: Gene
SIO_000068: ncbigene

position:190044:-1
position: 190044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196225:-1
position: 196225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190044-196225:-1:exon

NAPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: NAPA
product: NSF attachment protein alpha
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015272486.4
SIO_010081: NAPA
subclass of: SO_0000673
so part of: NAPA
location: complement(join(190044..190467,190587..190637,190906..190974,191047..191151,191488..191572,191689..191744,193173..193250,193321..193367,193993..194109,194530..194609,196099..196225))
location: region:190044-196225:-1
so has part: feature:196099-196225:-1:exon
so has part: feature:194530-194609:-1:exon
so has part: feature:193993-194109:-1:exon
so has part: feature:193321-193367:-1:exon
so has part: feature:193173-193250:-1:exon
so has part: feature:191689-191744:-1:exon
so has part: feature:191488-191572:-1:exon
so has part: feature:191047-191151:-1:exon
so has part: feature:190906-190974:-1:exon
so has part: feature:190587-190637:-1:exon
so has part: feature:190044-190467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196099-196225:-1:exon

position:196099:-1
position: 196099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194530-194609:-1:exon

position:194530:-1
position: 194530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194609:-1
position: 194609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193993-194109:-1:exon

position:193993:-1
position: 193993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194109:-1
position: 194109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193321-193367:-1:exon

position:193321:-1
position: 193321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193367:-1
position: 193367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:193173-193250:-1:exon

position:193173:-1
position: 193173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193250:-1
position: 193250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:191689-191744:-1:exon

position:191689:-1
position: 191689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191744:-1
position: 191744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:191488-191572:-1:exon

position:191488:-1
position: 191488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191572:-1
position: 191572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191047-191151:-1:exon

position:191047:-1
position: 191047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191151:-1
position: 191151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:190906-190974:-1:exon

position:190906:-1
position: 190906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190974:-1
position: 190974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:190587-190637:-1:exon

position:190587:-1
position: 190587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190637:-1
position: 190637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:190044-190467:-1:exon

position:190467:-1
position: 190467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: NAPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-soluble NSF attachment protein
translation: MDQAGKEKEALQLLAEADRKVRGSQSFFAGLFGGSSRIEEACDIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATNFVDAGNAFKKADPQEAINCLIRAIEIYTDMGRFTIAAKHHISIAEIYESELVDIEKAIAHYEQAADYYKGEESNSSANKCLLKVATYAAQLEQYQKAVEIYEQVGTSAMDSPLLKYSAKEYFFKAALCHFCIDMLNAKLAVQKYEEMFPAFTDSRECKLVKKLLDAHEEQNVDAYTDAVKEYDSISRLDQWLTTMLLRIKKTIQGEEEDLR
SIO_010081: NAPA
subclass of: SO_0000673
so part of: NAPA
location: complement(join(190366..190467,190587..190637,190906..190974,191047..191151,191488..191572,191689..191744,193173..193250,193321..193367,193993..194109,194530..194609,196099..196196))
location: region:190366-196196:-1
so has part: feature:196099-196196:-1:exon
so has part: feature:194530-194609:-1:exon
so has part: feature:193993-194109:-1:exon
so has part: feature:193321-193367:-1:exon
so has part: feature:193173-193250:-1:exon
so has part: feature:191689-191744:-1:exon
so has part: feature:191488-191572:-1:exon
so has part: feature:191047-191151:-1:exon
so has part: feature:190906-190974:-1:exon
so has part: feature:190587-190637:-1:exon
so has part: feature:190366-190467:-1:exon

XP_015127972.2
type: Protein
SIO_000068: ncbiprotein

position:190366:-1
position: 190366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196196:-1
position: 196196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196099-196196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194530-194609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193993-194109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193321-193367:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193173-193250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191689-191744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191488-191572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191047-191151:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190906-190974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190587-190637:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190366-190467:-1:exon

LOC112530471
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC112530471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 196149..205969
location: region:196149-205969:1
so has part: feature:196149-205969:1:exon
subclass of: SO_0000010

112530471
type: Gene
SIO_000068: ncbigene

position:196149:1
position: 196149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205969:1
position: 205969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196149-205969:1:exon

LOC112530471
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC112530471
product: uncharacterized LOC112530471, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025144515.3
SIO_010081: LOC112530471
subclass of: SO_0000673
so part of: LOC112530471
location: join(196149..196487,205166..205969)
location: region:196149-205969:1
so has part: feature:196149-196487:1:exon
so has part: feature:205166-205969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196149-196487:1:exon

position:196487:1
position: 196487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205166-205969:1:exon

position:205166:1
position: 205166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112530471
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC112530471
product: uncharacterized LOC112530471, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144516.3
SIO_010081: LOC112530471
subclass of: SO_0000673
so part of: LOC112530471
location: join(196149..196487,199130..200232)
location: region:196149-200232:1
so has part: feature:196149-196487:1:exon
so has part: feature:199130-200232:1:exon

position:200232:1
position: 200232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196149-196487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199130-200232:1:exon

position:199130:1
position: 199130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112530471
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC112530471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112530471 isoform X1
translation: MAAAFRPTGRQLRPLHVMRGAAPHWLAGDHVRREEPAAVCAEREGTAPPGVGRGRRTNVAPMTSPPRGDTAHDVITAAMTSPRHKIRPRSRALRGSRGHSKWALLSATEPSIPSRRAMAGGGRARSASSISQRAPNRRRAEHNFSPPLQGSSNGDTVMRSAHLSRQGLQVFPFRTQSRLQNPTGKGEIHPIEGKISREEDSSEIPAAGGAVTMAVCSAVRADGALQAEKLRRALKLGETECGLGKIKAALHPNGASS
SIO_010081: LOC112530471
subclass of: SO_0000673
so part of: LOC112530471
location: join(196195..196487,205166..205646)
location: region:196195-205646:1
so has part: feature:196195-196487:1:exon
so has part: feature:205166-205646:1:exon

XP_025000283.2
type: Protein
SIO_000068: ncbiprotein

position:196195:1
position: 196195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205646:1
position: 205646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196195-196487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205166-205646:1:exon

LOC112530471
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC112530471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112530471 isoform X2
translation: MAAAFRPTGRQLRPLHVMRGAAPHWLAGDHVRREEPAAVCAEREGTAPPGVGRGRRTNVAPMTSPPRGDTAHDVITAAMTSPRHKIRPRSRALRGSRGCSSTRRTGTRSSSGPEREERK
SIO_010081: LOC112530471
subclass of: SO_0000673
so part of: LOC112530471
location: join(196195..196487,199130..199196)
location: region:196195-199196:1
so has part: feature:196195-196487:1:exon
so has part: feature:199130-199196:1:exon

XP_025000284.2
type: Protein
SIO_000068: ncbiprotein

position:199196:1
position: 199196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196195-196487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199130-199196:1:exon

LOC112530471
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: LOC112530471
product: uncharacterized LOC112530471, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_006932309.1
SIO_010081: LOC112530471
so part of: LOC112530471
location: join(196655..198888,199130..199834)
location: region:196655-199834:1
so has part: feature:196655-198888:1:exon
so has part: feature:199130-199834:1:exon

position:196655:1
position: 196655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199834:1
position: 199834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196655-198888:1:exon

position:198888:1
position: 198888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199130-199834:1:exon

LOC112530471
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: LOC112530471
product: uncharacterized LOC112530471, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_005842476.2
SIO_010081: LOC112530471
so part of: LOC112530471
location: join(196655..197850,197971..198888,199130..199834)
location: region:196655-199834:1
so has part: feature:196655-197850:1:exon
so has part: feature:197971-198888:1:exon
so has part: feature:199130-199834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196655-197850:1:exon

position:197850:1
position: 197850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197971-198888:1:exon

position:197971:1
position: 197971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199130-199834:1:exon

ZNF541
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197747..208915)
location: region:197747-208915:-1
so has part: feature:197747-208915:-1:exon
subclass of: SO_0000010

100858546
type: Gene
SIO_000068: ncbigene

position:197747:-1
position: 197747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208915:-1
position: 208915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197747-208915:-1:exon

ZNF541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ZNF541
product: zinc finger protein 541, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144471.3
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(197747..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,202104..202263,202574..202632,202897..203767,204211..204361,205994..206238,208333..208915))
location: region:197747-208915:-1
so has part: feature:208333-208915:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202104-202263:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:197747-198501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208333-208915:-1:exon

position:208333:-1
position: 208333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

position:205994:-1
position: 205994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206238:-1
position: 206238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

position:204211:-1
position: 204211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204361:-1
position: 204361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

position:202897:-1
position: 202897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203767:-1
position: 203767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

position:202574:-1
position: 202574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202632:-1
position: 202632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:202104-202263:-1:exon

position:202104:-1
position: 202104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202263:-1
position: 202263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201071-201395:-1:exon

position:201071:-1
position: 201071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201395:-1
position: 201395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:200576-200639:-1:exon

position:200576:-1
position: 200576
reference: sequence
type: ReverseStrandPosition
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position:200639:-1
position: 200639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199832-200369:-1:exon

position:199832:-1
position: 199832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200369:-1
position: 200369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:199500-199575:-1:exon

position:199500:-1
position: 199500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199575:-1
position: 199575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:199289-199377:-1:exon

position:199289:-1
position: 199289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199377:-1
position: 199377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:199033-199173:-1:exon

position:199033:-1
position: 199033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199173:-1
position: 199173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:198705-198868:-1:exon

position:198705:-1
position: 198705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198868:-1
position: 198868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:197747-198501:-1:exon

position:198501:-1
position: 198501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ZNF541
product: zinc finger protein 541, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144469.3
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(197747..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202104..202263,202574..202632,202897..203767,204211..204361,205994..206238,208333..208915))
location: region:197747-208915:-1
so has part: feature:208333-208915:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202104-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:197747-198501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208333-208915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202104-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

position:201856:-1
position: 201856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201969:-1
position: 201969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197747-198501:-1:exon

ZNF541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ZNF541
product: zinc finger protein 541, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655132.2
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(197747..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..199935,200230..200369,200576..200639,201071..201395,201856..201969,202062..202263,202574..202632,202897..203767,204211..204361,205994..206238,208333..208915))
location: region:197747-208915:-1
so has part: feature:208333-208915:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202062-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:200230-200369:-1:exon
so has part: feature:199832-199935:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:197747-198501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208333-208915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202062-202263:-1:exon

position:202062:-1
position: 202062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200230-200369:-1:exon

position:200230:-1
position: 200230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:199832-199935:-1:exon

position:199935:-1
position: 199935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:197747-198501:-1:exon

ZNF541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ZNF541
product: zinc finger protein 541, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655129.2
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(197747..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202062..202263,202574..202632,202897..203767,204211..204361,205994..206238,208333..208915))
location: region:197747-208915:-1
so has part: feature:208333-208915:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202062-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:197747-198501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208333-208915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202062-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197747-198501:-1:exon

ZNF541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ZNF541
product: zinc finger protein 541, transcript variant X7
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655133.2
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(197747..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202062..202263,202574..202632,202897..203767,204211..204361,205994..206238,207795..208261))
location: region:197747-208261:-1
so has part: feature:207795-208261:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202062-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:197747-198501:-1:exon

position:208261:-1
position: 208261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207795-208261:-1:exon

position:207795:-1
position: 207795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202062-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197747-198501:-1:exon

ZNF541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ZNF541
product: zinc finger protein 541, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655131.2
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(197747..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202104..202263,202574..202632,202897..203767,204211..204361,205994..206238,207064..208261))
location: region:197747-208261:-1
so has part: feature:207064-208261:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202104-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:197747-198501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207064-208261:-1:exon

position:207064:-1
position: 207064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202104-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197747-198501:-1:exon

ZNF541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ZNF541
product: zinc finger protein 541, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655130.2
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(197747..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202062..202263,202574..202632,202897..203767,204211..204361,205994..206238,207064..208261))
location: region:197747-208261:-1
so has part: feature:207064-208261:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202062-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:197747-198501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207064-208261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202062-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197747-198501:-1:exon

ZNF541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541 isoform X3
translation: MRHAHGRRGGAAGRQRAALRERSSGSGGAAESPPGGAGRPRAVRRDPPRAAPGAPGTARNRRESPRAPCRQPREPLGPCPGSGGPPHLPGTRRGRDGRRQLLRPNGFSHPAATMEQFSFGDESSVSLEIQLLGFTESPGPELSLQGAAAAPPDGAAPPDTAGAALEDGLSVLSLCPGREWDGEVQHGLCLPGVPNTDTAAAQSQPSPPSSPLPCGCCGTLLCSTNHSPTDSQQHQHPSRTRKGSVCPERRCERCELQPPRCPQSVGCPPCSLVEDSSVPEGCPQIPAAAAAGDELRGSVAPSPALLEPPGMGADPGAAVPRFAVLSSHPWVSTAPLCAQRSSSCFTLKPSPAGREAPLSCSFLPEYTDASPFPLMSSGVEEVALGRPEDGAQPWQSMAEQQAVLSGGGQLRAACPEPGTQNLLQVLAASQHALSHVLTPKGPKDSSPCAREHEGSAAMDRLQNKAASSKGERSRGCGVAAGRSWRVPAARREKLSAGLAGTASPSQVAMASFAPRQQSGLTVLQRIQGGNICSFPGTAQEDGASAASATSSAAPTNSSDCDGVFLCKNCHQVFYTQKGLGSHMCFRDEQWLLPQRREEPQVTPKESQDGKSPQLSSHPKKRKRQILPKPLFIPPPPPPEAQPGPGGCYRSNLRSPVLLMDRLLRDLLQCSPYTPPPMLSPVREGSGLYFNAVCSSTAAEPCRLLGSVLDRMDQDFGLCLMKDGTKISIEPHINIGSRFQAEIPTLQDRPGLGSAEQAALVWKPWGDIATNEETQDRGCFTLYLQEFGGPLVKNAFAAAFCTPRGSALLFRALFHGAEVGLGAGAVGCEWLCAPRWAAGGGQLGGSPQQCPSPLFFGTPWVLRWEPMRFDFHCLAVMELLNMACSSVMPGGGTNLELALHCLHEARGNVVDALELLLFGWPHKSQSHPLANYRYTGSDVWTPVERQLFRNAFHAHKKDFYLIQKKVQTKNVSQCVEYYYIWKKIIKFDHSRAQNADKKAKRDGSEAEEAEEKPLCPPKKRHCLLPKESSKKSCRKAPHGAGSPSCSVGRAPGGVEHHNVFPCTECERVFDKIKGRNAHMKRHRPQHRAVPLLQAQWALGPLKREEAAAGGALSSSWGAEPPE
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(198333..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,202104..202263,202574..202632,202897..203767,204211..204361,205994..206238,208333..208646))
location: region:198333-208646:-1
so has part: feature:208333-208646:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202104-202263:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:198333-198501:-1:exon

XP_025000239.2
type: Protein
SIO_000068: ncbiprotein

position:198333:-1
position: 198333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208646:-1
position: 208646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208333-208646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202104-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198333-198501:-1:exon

ZNF541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541 isoform X2
translation: MRHAHGRRGGAAGRQRAALRERSSGSGGAAESPPGGAGRPRAVRRDPPRAAPGAPGTARNRRESPRAPCRQPREPLGPCPGSGGPPHLPGTRRGRDGRRQLLRPNGFSHPAATMEQFSFGDESSVSLEIQLLGFTESPGPELSLQGAAAAPPDGAAPPDTAGAALEDGLSVLSLCPGREWDGEVQHGLCLPGVPNTDTAAAQSQPSPPSSPLPCGCCGTLLCSTNHSPTDSQQHQHPSRTRKGSVCPERRCERCELQPPRCPQSVGCPPCSLVEDSSVPEGCPQIPAAAAAGDELRGSVAPSPALLEPPGMGADPGAAVPRFAVLSSHPWVSTAPLCAQRSSSCFTLKPSPAGREAPLSCSFLPEYTDASPFPLMSSGVEEVALGRPEDGAQPWQSMAEQQAVLSGGGQLRAACPEPGTQNLLQVLAASQHALSHVLTPKGPKDSSPCAREHEGSAAMDRLQNKAASSKGERSRGCGVAAGRSWRVPAARREKLSAGLAGTASPSQVAMASFAPRQQSGLTVLQRIQGGNICSFPGTAQEDGASAASATSSAAPTNSSDCDGVFLCKNCHQVFYTQKGLGSHMCFRDEQWLLPQRREEPQGCAAEDGSAARPELQEEPCEAGAALLIPVSVPVLPGGEVTPKESQDGKSPQLSSHPKKRKRQILPKPLFIPPPPPPEAQPGPGGCYRSNLRSPVLLMDRLLRDLLQCSPYTPPPMLSPVREGSGLYFNAVCSSTAAEPCRLLGSVLDRMDQDFGLCLMKDGTKISIEPHINIGSRFQAEIPTLQDRPGLGSAEQAALVWKPWGDIATNEETQDRGCFTLYLQEFGGPLVKNAFAAAFCTPRGSALLFRALFHGAEVGLGAGAVGCEWLCAPRWAAGGGQLGGSPQQCPSPLFFGTPWVLRWEPMRFDFHCLAVMELLNMACSSVMPGGGTNLELALHCLHEARGNVVDALELLLFGWPHKSQSHPLANYRYTGSDVWTPVERQLFRNAFHAHKKDFYLIQKKVQTKNVSQCVEYYYIWKKIIKFDHSRAQNADKKAKRDGSEAEEAEEKPLCPPKKRHCLLPKESSKKSCRKAPHGAGSPSCSVGRAPGGVEHHNVFPCTECERVFDKIKGRNAHMKRHRPQHRAVPLLQAQWALGPLKREEAAAGGALSSSWGAEPPE
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(198333..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202104..202263,202574..202632,202897..203767,204211..204361,205994..206238,208333..208646))
location: region:198333-208646:-1
so has part: feature:208333-208646:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202104-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:198333-198501:-1:exon

XP_025000237.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208333-208646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202104-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:198333-198501:-1:exon

ZNF541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541 isoform X6
translation: MRHAHGRRGGAAGRQRAALRERSSGSGGAAESPPGGAGRPRAVRRDPPRAAPGAPGTARNRRESPRAPCRQPREPLGPCPGSGGPPHLPGTRRGRDGRRQLLRPNGFSHPAATMEQFSFGDESSVSLEIQLLGFTESPGPELSLQGAAAAPPDGAAPPDTAGAALEDGLSVLSLCPGREWDGEVQHGLCLPGVPNTDTAAAQSQPSPPSSPLPCGCCGTLLCSTNHSPTDSQQHQHPSRTRKGSVCPERRCERCELQPPRCPQSVGCPPCSLVEDSSVPEGCPQIPAAAAAGDELRGSVAPSPALLEPPGMGADPGAAVPRFAVLSSHPWVSTAPLCAQRSSSCFTLKPSPAGREAPLSCSFLPEYTDASPFPLMSSGVEEVALGRPEDGAQPWQSMAEQQAVLSGGGQLRAACPEPGTQNLLQVLAASQHALSHVLTPKGPKDSSPCAREHEGSAAMDRLQNKAASSKGERSRGCGVAAGRSWRVPAARREKLSAGLAGTASPSQVAMASFAPRQQSGLTVLQRIQGGNICSFPGTAQEDGASAASATSSAAPTNSSDCDGVFLCKNCHQVFYTQKGLGSHMCFRDEQWLLPQRREEPQVKGKQRGRGAQKAKGCAAEDGSAARPELQEEPCEAGAALLIPVSVPVLPGGEVTPKESQDGKSPQLSSHPKKRKRQILPKPLFIPPPPPPEAQPGPGGCYRSNLRSPVLLMDRLLRDLLQCSPYTPPPMLSPVREGSGLYFNAVCSSTAAEPCRLLGSVLDRMDQDFGLCLMKDGTKISIEPHINIGSRFQAEIPTLQDRPGLGSAEQAALVWKPWGDIATNEETQDRVMELLNMACSSVMPGGGTNLELALHCLHEARGNVVDALELLLFGWPHKSQSHPLANYRYTGSDVWTPVERQLFRNAFHAHKKDFYLIQKKVQTKNVSQCVEYYYIWKKIIKFDHSRAQNADKKAKRDGSEAEEAEEKPLCPPKKRHCLLPKESSKKSCRKAPHGAGSPSCSVGRAPGGVEHHNVFPCTECERVFDKIKGRNAHMKRHRPQHRAVPLLQAQWALGPLKREEAAAGGALSSSWGAEPPE
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(198333..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..199935,200230..200369,200576..200639,201071..201395,201856..201969,202062..202263,202574..202632,202897..203767,204211..204361,205994..206238,208333..208646))
location: region:198333-208646:-1
so has part: feature:208333-208646:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202062-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:200230-200369:-1:exon
so has part: feature:199832-199935:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:198333-198501:-1:exon

XP_040511066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208333-208646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202062-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200230-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199832-199935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:198333-198501:-1:exon

ZNF541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541 isoform X1
translation: MRHAHGRRGGAAGRQRAALRERSSGSGGAAESPPGGAGRPRAVRRDPPRAAPGAPGTARNRRESPRAPCRQPREPLGPCPGSGGPPHLPGTRRGRDGRRQLLRPNGFSHPAATMEQFSFGDESSVSLEIQLLGFTESPGPELSLQGAAAAPPDGAAPPDTAGAALEDGLSVLSLCPGREWDGEVQHGLCLPGVPNTDTAAAQSQPSPPSSPLPCGCCGTLLCSTNHSPTDSQQHQHPSRTRKGSVCPERRCERCELQPPRCPQSVGCPPCSLVEDSSVPEGCPQIPAAAAAGDELRGSVAPSPALLEPPGMGADPGAAVPRFAVLSSHPWVSTAPLCAQRSSSCFTLKPSPAGREAPLSCSFLPEYTDASPFPLMSSGVEEVALGRPEDGAQPWQSMAEQQAVLSGGGQLRAACPEPGTQNLLQVLAASQHALSHVLTPKGPKDSSPCAREHEGSAAMDRLQNKAASSKGERSRGCGVAAGRSWRVPAARREKLSAGLAGTASPSQVAMASFAPRQQSGLTVLQRIQGGNICSFPGTAQEDGASAASATSSAAPTNSSDCDGVFLCKNCHQVFYTQKGLGSHMCFRDEQWLLPQRREEPQVKGKQRGRGAQKAKGCAAEDGSAARPELQEEPCEAGAALLIPVSVPVLPGGEVTPKESQDGKSPQLSSHPKKRKRQILPKPLFIPPPPPPEAQPGPGGCYRSNLRSPVLLMDRLLRDLLQCSPYTPPPMLSPVREGSGLYFNAVCSSTAAEPCRLLGSVLDRMDQDFGLCLMKDGTKISIEPHINIGSRFQAEIPTLQDRPGLGSAEQAALVWKPWGDIATNEETQDRGCFTLYLQEFGGPLVKNAFAAAFCTPRGSALLFRALFHGAEVGLGAGAVGCEWLCAPRWAAGGGQLGGSPQQCPSPLFFGTPWVLRWEPMRFDFHCLAVMELLNMACSSVMPGGGTNLELALHCLHEARGNVVDALELLLFGWPHKSQSHPLANYRYTGSDVWTPVERQLFRNAFHAHKKDFYLIQKKVQTKNVSQCVEYYYIWKKIIKFDHSRAQNADKKAKRDGSEAEEAEEKPLCPPKKRHCLLPKESSKKSCRKAPHGAGSPSCSVGRAPGGVEHHNVFPCTECERVFDKIKGRNAHMKRHRPQHRAVPLLQAQWALGPLKREEAAAGGALSSSWGAEPPE
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(198333..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202062..202263,202574..202632,202897..203767,204211..204361,205994..206238,208333..208646))
location: region:198333-208646:-1
so has part: feature:208333-208646:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202062-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:198333-198501:-1:exon

XP_040511063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208333-208646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202062-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:198333-198501:-1:exon

ZNF541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541 isoform X7
translation: MTQRGFSHPAATMEQFSFGDESSVSLEIQLLGFTESPGPELSLQGAAAAPPDGAAPPDTAGAALEDGLSVLSLCPGREWDGEVQHGLCLPGVPNTDTAAAQSQPSPPSSPLPCGCCGTLLCSTNHSPTDSQQHQHPSRTRKGSVCPERRCERCELQPPRCPQSVGCPPCSLVEDSSVPEGCPQIPAAAAAGDELRGSVAPSPALLEPPGMGADPGAAVPRFAVLSSHPWVSTAPLCAQRSSSCFTLKPSPAGREAPLSCSFLPEYTDASPFPLMSSGVEEVALGRPEDGAQPWQSMAEQQAVLSGGGQLRAACPEPGTQNLLQVLAASQHALSHVLTPKGPKDSSPCAREHEGSAAMDRLQNKAASSKGERSRGCGVAAGRSWRVPAARREKLSAGLAGTASPSQVAMASFAPRQQSGLTVLQRIQGGNICSFPGTAQEDGASAASATSSAAPTNSSDCDGVFLCKNCHQVFYTQKGLGSHMCFRDEQWLLPQRREEPQVKGKQRGRGAQKAKGCAAEDGSAARPELQEEPCEAGAALLIPVSVPVLPGGEVTPKESQDGKSPQLSSHPKKRKRQILPKPLFIPPPPPPEAQPGPGGCYRSNLRSPVLLMDRLLRDLLQCSPYTPPPMLSPVREGSGLYFNAVCSSTAAEPCRLLGSVLDRMDQDFGLCLMKDGTKISIEPHINIGSRFQAEIPTLQDRPGLGSAEQAALVWKPWGDIATNEETQDRGCFTLYLQEFGGPLVKNAFAAAFCTPRGSALLFRALFHGAEVGLGAGAVGCEWLCAPRWAAGGGQLGGSPQQCPSPLFFGTPWVLRWEPMRFDFHCLAVMELLNMACSSVMPGGGTNLELALHCLHEARGNVVDALELLLFGWPHKSQSHPLANYRYTGSDVWTPVERQLFRNAFHAHKKDFYLIQKKVQTKNVSQCVEYYYIWKKIIKFDHSRAQNADKKAKRDGSEAEEAEEKPLCPPKKRHCLLPKESSKKSCRKAPHGAGSPSCSVGRAPGGVEHHNVFPCTECERVFDKIKGRNAHMKRHRPQHRAVPLLQAQWALGPLKREEAAAGGALSSSWGAEPPE
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(198333..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202062..202263,202574..202632,202897..203767,204211..204361,205994..206238,207795..207805))
location: region:198333-207805:-1
so has part: feature:207795-207805:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202062-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:198333-198501:-1:exon

XP_040511067.1
type: Protein
SIO_000068: ncbiprotein

position:207805:-1
position: 207805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207795-207805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202062-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:198333-198501:-1:exon

ZNF541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541 isoform X5
translation: MRSAAGTRRGAAAPPLLCCFSRRGFSHPAATMEQFSFGDESSVSLEIQLLGFTESPGPELSLQGAAAAPPDGAAPPDTAGAALEDGLSVLSLCPGREWDGEVQHGLCLPGVPNTDTAAAQSQPSPPSSPLPCGCCGTLLCSTNHSPTDSQQHQHPSRTRKGSVCPERRCERCELQPPRCPQSVGCPPCSLVEDSSVPEGCPQIPAAAAAGDELRGSVAPSPALLEPPGMGADPGAAVPRFAVLSSHPWVSTAPLCAQRSSSCFTLKPSPAGREAPLSCSFLPEYTDASPFPLMSSGVEEVALGRPEDGAQPWQSMAEQQAVLSGGGQLRAACPEPGTQNLLQVLAASQHALSHVLTPKGPKDSSPCAREHEGSAAMDRLQNKAASSKGERSRGCGVAAGRSWRVPAARREKLSAGLAGTASPSQVAMASFAPRQQSGLTVLQRIQGGNICSFPGTAQEDGASAASATSSAAPTNSSDCDGVFLCKNCHQVFYTQKGLGSHMCFRDEQWLLPQRREEPQGCAAEDGSAARPELQEEPCEAGAALLIPVSVPVLPGGEVTPKESQDGKSPQLSSHPKKRKRQILPKPLFIPPPPPPEAQPGPGGCYRSNLRSPVLLMDRLLRDLLQCSPYTPPPMLSPVREGSGLYFNAVCSSTAAEPCRLLGSVLDRMDQDFGLCLMKDGTKISIEPHINIGSRFQAEIPTLQDRPGLGSAEQAALVWKPWGDIATNEETQDRGCFTLYLQEFGGPLVKNAFAAAFCTPRGSALLFRALFHGAEVGLGAGAVGCEWLCAPRWAAGGGQLGGSPQQCPSPLFFGTPWVLRWEPMRFDFHCLAVMELLNMACSSVMPGGGTNLELALHCLHEARGNVVDALELLLFGWPHKSQSHPLANYRYTGSDVWTPVERQLFRNAFHAHKKDFYLIQKKVQTKNVSQCVEYYYIWKKIIKFDHSRAQNADKKAKRDGSEAEEAEEKPLCPPKKRHCLLPKESSKKSCRKAPHGAGSPSCSVGRAPGGVEHHNVFPCTECERVFDKIKGRNAHMKRHRPQHRAVPLLQAQWALGPLKREEAAAGGALSSSWGAEPPE
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(198333..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202104..202263,202574..202632,202897..203767,204211..204361,205994..206238,207064..207131))
location: region:198333-207131:-1
so has part: feature:207064-207131:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202104-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:198333-198501:-1:exon

XP_040511065.1
type: Protein
SIO_000068: ncbiprotein

position:207131:-1
position: 207131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207064-207131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202104-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:198333-198501:-1:exon

ZNF541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541 isoform X4
translation: MRSAAGTRRGAAAPPLLCCFSRRGFSHPAATMEQFSFGDESSVSLEIQLLGFTESPGPELSLQGAAAAPPDGAAPPDTAGAALEDGLSVLSLCPGREWDGEVQHGLCLPGVPNTDTAAAQSQPSPPSSPLPCGCCGTLLCSTNHSPTDSQQHQHPSRTRKGSVCPERRCERCELQPPRCPQSVGCPPCSLVEDSSVPEGCPQIPAAAAAGDELRGSVAPSPALLEPPGMGADPGAAVPRFAVLSSHPWVSTAPLCAQRSSSCFTLKPSPAGREAPLSCSFLPEYTDASPFPLMSSGVEEVALGRPEDGAQPWQSMAEQQAVLSGGGQLRAACPEPGTQNLLQVLAASQHALSHVLTPKGPKDSSPCAREHEGSAAMDRLQNKAASSKGERSRGCGVAAGRSWRVPAARREKLSAGLAGTASPSQVAMASFAPRQQSGLTVLQRIQGGNICSFPGTAQEDGASAASATSSAAPTNSSDCDGVFLCKNCHQVFYTQKGLGSHMCFRDEQWLLPQRREEPQVKGKQRGRGAQKAKGCAAEDGSAARPELQEEPCEAGAALLIPVSVPVLPGGEVTPKESQDGKSPQLSSHPKKRKRQILPKPLFIPPPPPPEAQPGPGGCYRSNLRSPVLLMDRLLRDLLQCSPYTPPPMLSPVREGSGLYFNAVCSSTAAEPCRLLGSVLDRMDQDFGLCLMKDGTKISIEPHINIGSRFQAEIPTLQDRPGLGSAEQAALVWKPWGDIATNEETQDRGCFTLYLQEFGGPLVKNAFAAAFCTPRGSALLFRALFHGAEVGLGAGAVGCEWLCAPRWAAGGGQLGGSPQQCPSPLFFGTPWVLRWEPMRFDFHCLAVMELLNMACSSVMPGGGTNLELALHCLHEARGNVVDALELLLFGWPHKSQSHPLANYRYTGSDVWTPVERQLFRNAFHAHKKDFYLIQKKVQTKNVSQCVEYYYIWKKIIKFDHSRAQNADKKAKRDGSEAEEAEEKPLCPPKKRHCLLPKESSKKSCRKAPHGAGSPSCSVGRAPGGVEHHNVFPCTECERVFDKIKGRNAHMKRHRPQHRAVPLLQAQWALGPLKREEAAAGGALSSSWGAEPPE
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: complement(join(198333..198501,198705..198868,199033..199173,199289..199377,199500..199575,199832..200369,200576..200639,201071..201395,201856..201969,202062..202263,202574..202632,202897..203767,204211..204361,205994..206238,207064..207131))
location: region:198333-207131:-1
so has part: feature:207064-207131:-1:exon
so has part: feature:205994-206238:-1:exon
so has part: feature:204211-204361:-1:exon
so has part: feature:202897-203767:-1:exon
so has part: feature:202574-202632:-1:exon
so has part: feature:202062-202263:-1:exon
so has part: feature:201856-201969:-1:exon
so has part: feature:201071-201395:-1:exon
so has part: feature:200576-200639:-1:exon
so has part: feature:199832-200369:-1:exon
so has part: feature:199500-199575:-1:exon
so has part: feature:199289-199377:-1:exon
so has part: feature:199033-199173:-1:exon
so has part: feature:198705-198868:-1:exon
so has part: feature:198333-198501:-1:exon

XP_040511064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207064-207131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205994-206238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204211-204361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202897-203767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202574-202632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202062-202263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201856-201969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201071-201395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200576-200639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199832-200369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199500-199575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:199289-199377:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199033-199173:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198705-198868:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:198333-198501:-1:exon

BICRA
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 207513..226683
location: region:207513-226683:1
so has part: feature:207513-226683:1:exon
subclass of: SO_0000010

101749950
type: Gene
SIO_000068: ncbigene

position:207513:1
position: 207513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226683:1
position: 226683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207513-226683:1:exon

BICRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: BICRA
product: glioma tumor suppressor candidate region gene 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040655128.1
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: join(207513..207650,207725..207805,214381..214426,214560..214602,215808..217823,220618..220807,221822..221949,222255..222374,222663..222724,223079..223227,223701..223795,224267..224369,225502..226683)
location: region:207513-226683:1
so has part: feature:207513-207650:1:exon
so has part: feature:207725-207805:1:exon
so has part: feature:214381-214426:1:exon
so has part: feature:214560-214602:1:exon
so has part: feature:215808-217823:1:exon
so has part: feature:220618-220807:1:exon
so has part: feature:221822-221949:1:exon
so has part: feature:222255-222374:1:exon
so has part: feature:222663-222724:1:exon
so has part: feature:223079-223227:1:exon
so has part: feature:223701-223795:1:exon
so has part: feature:224267-224369:1:exon
so has part: feature:225502-226683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207513-207650:1:exon

position:207650:1
position: 207650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207725-207805:1:exon

position:207725:1
position: 207725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207805:1
position: 207805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214381-214426:1:exon

position:214381:1
position: 214381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214426:1
position: 214426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214560-214602:1:exon

position:214560:1
position: 214560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214602:1
position: 214602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215808-217823:1:exon

position:215808:1
position: 215808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217823:1
position: 217823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:220618-220807:1:exon

position:220618:1
position: 220618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220807:1
position: 220807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:221822-221949:1:exon

position:221822:1
position: 221822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221949:1
position: 221949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:222255-222374:1:exon

position:222255:1
position: 222255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222374:1
position: 222374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:222663-222724:1:exon

position:222663:1
position: 222663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222724:1
position: 222724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:223079-223227:1:exon

position:223079:1
position: 223079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223227:1
position: 223227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:223701-223795:1:exon

position:223701:1
position: 223701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223795:1
position: 223795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:224267-224369:1:exon

position:224267:1
position: 224267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224369:1
position: 224369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:225502-226683:1:exon

position:225502:1
position: 225502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BICRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: BICRA
product: glioma tumor suppressor candidate region gene 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040655126.1
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: join(207594..207650,207725..207805,214381..214426,214560..214602,214926..214991,215808..217823,220618..220807,221822..221949,222255..222374,222663..222724,223079..223227,223701..223795,224267..224369,225502..226683)
location: region:207594-226683:1
so has part: feature:207594-207650:1:exon
so has part: feature:207725-207805:1:exon
so has part: feature:214381-214426:1:exon
so has part: feature:214560-214602:1:exon
so has part: feature:214926-214991:1:exon
so has part: feature:215808-217823:1:exon
so has part: feature:220618-220807:1:exon
so has part: feature:221822-221949:1:exon
so has part: feature:222255-222374:1:exon
so has part: feature:222663-222724:1:exon
so has part: feature:223079-223227:1:exon
so has part: feature:223701-223795:1:exon
so has part: feature:224267-224369:1:exon
so has part: feature:225502-226683:1:exon

position:207594:1
position: 207594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207594-207650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207725-207805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214381-214426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214560-214602:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214926-214991:1:exon

position:214926:1
position: 214926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214991:1
position: 214991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215808-217823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:220618-220807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:221822-221949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:222255-222374:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:222663-222724:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:223079-223227:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:223701-223795:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224267-224369:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225502-226683:1:exon

BICRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: BICRA
product: glioma tumor suppressor candidate region gene 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040655125.2
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: join(208862..208922,214381..214426,214560..214602,214926..214991,215808..217823,220618..220807,221822..221949,222255..222374,222663..222724,223079..223227,223701..223795,224267..224369,225502..226683)
location: region:208862-226683:1
so has part: feature:208862-208922:1:exon
so has part: feature:214381-214426:1:exon
so has part: feature:214560-214602:1:exon
so has part: feature:214926-214991:1:exon
so has part: feature:215808-217823:1:exon
so has part: feature:220618-220807:1:exon
so has part: feature:221822-221949:1:exon
so has part: feature:222255-222374:1:exon
so has part: feature:222663-222724:1:exon
so has part: feature:223079-223227:1:exon
so has part: feature:223701-223795:1:exon
so has part: feature:224267-224369:1:exon
so has part: feature:225502-226683:1:exon

position:208862:1
position: 208862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208862-208922:1:exon

position:208922:1
position: 208922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214381-214426:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214560-214602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214926-214991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215808-217823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:220618-220807:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221822-221949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222255-222374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:222663-222724:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223079-223227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:223701-223795:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224267-224369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:225502-226683:1:exon

BICRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: BICRA
product: glioma tumor suppressor candidate region gene 1, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040655127.2
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: join(208862..208922,214381..214426,214560..214602,215808..217823,220618..220807,221822..221949,222255..222374,222663..222724,223079..223227,223701..223795,224267..224369,225502..226683)
location: region:208862-226683:1
so has part: feature:208862-208922:1:exon
so has part: feature:214381-214426:1:exon
so has part: feature:214560-214602:1:exon
so has part: feature:215808-217823:1:exon
so has part: feature:220618-220807:1:exon
so has part: feature:221822-221949:1:exon
so has part: feature:222255-222374:1:exon
so has part: feature:222663-222724:1:exon
so has part: feature:223079-223227:1:exon
so has part: feature:223701-223795:1:exon
so has part: feature:224267-224369:1:exon
so has part: feature:225502-226683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208862-208922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214381-214426:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214560-214602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215808-217823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220618-220807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221822-221949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222255-222374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222663-222724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223079-223227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223701-223795:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:224267-224369:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225502-226683:1:exon

BICRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
translation: MDDEDGRCLLDVICDPQALNDFLHGSEKIDSDDLLDSTGDAASAFFEGAGLHVQESSGNHLTAEQSQPSASVDLDFLEDDILGSPAGGGANLPSSEQPCDILQQSLQEANITEQTLEAEAELDLGSFQLPTLQPVVQAASDGAPQIFSGGADLIGLQQPAVLTHQALVQQSVGADVVNKAISVQPFLQQVGLGNVTIQPISNLQGLPNGSPGGALGIGPIQVVGQQVMAINQPAQQIIAKQVQPSQVATVPVGSYITQTAPEQQQVALTSAGVSPQGAGLVIQKNLPAVATTTLNGSSVFGGVSGAQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFGSNNATLTIQNEAALQQQKAQQNLTFMAGKPAQNVVLSGFPQGLPANVFKQPPPQQQALSKPMSVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGAPAVQIPQQLSALPANVGGQILAASHGGGQAHIITSQGPGGQLIANQALPAQILTNQNIAGQLNLGPVLASQNAHGTAHILSAPIQLQPGQVGQPALFQMPVSLAGSLTTQSQPSVAAPLPGAAAAAIGQTGQTVIQGVTLPSQVAMLNAADNLGQAVSIQPSGSSQSPGLLPPQPAPTAGLLPAAAADPPASILAIQPPAAPPAAPAPLQLSVQPPPPAPPPAPLPAASQPSPGLAASPEKIILGQAAAGAVINQDSMQMFLQQVPQGIILQTKQQTPTSQASPALSQFSSQSSSVLVSSQGQPVTVTATPTPAHSHAPTAGPPSSAGGTAPPPSDSKPFSSATAPIAAGKGPTATGKPGATLAMPQPVQTKPGVISSVSGLNLGKGPLQIQVVGKGLSQLVPSVQSQQLYDSKLGSLKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFHSFEDALQRLLPYHVYQGMLPSAQDYRKVDEEFEVVSTQLLKRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTMLALDKQLAKEKPDEYVSSSSRSQSLSLAAAQPSSSSSSSSSGLAPAADGSKAAAVQTATAINPTKLVIKHSGGSPSVTWAKASPSLDGDDDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPVCRVIKAAEQHPAAGQMNGTLEHGSAAPPEKKAAVSFCRLPLRKTYRENVDAFVAEKPTDKGSGAARADKAPLKQEDGTHKGPEGAAADKGRAEESSKLLFFGRGDARPLVLHGSPVPQKSDDPSSGLMKELAEVEEEFYHGMIKTEPPDHGPGAELTWEVPLPPTKRRKSESFEVDNASFSSDSPQDDSLNEHLQSAIDSILNLQQPQTGGQNVRTPSSSYNSSSSPFSSPVHRTDAYLAPNHNGGLGARTLNR
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: join(214386..214426,214560..214602,214926..214991,215808..217823,220618..220807,221822..221949,222255..222374,222663..222724,223079..223227,223701..223795,224267..224369,225502..226649)
location: region:214386-226649:1
so has part: feature:214386-214426:1:exon
so has part: feature:214560-214602:1:exon
so has part: feature:214926-214991:1:exon
so has part: feature:215808-217823:1:exon
so has part: feature:220618-220807:1:exon
so has part: feature:221822-221949:1:exon
so has part: feature:222255-222374:1:exon
so has part: feature:222663-222724:1:exon
so has part: feature:223079-223227:1:exon
so has part: feature:223701-223795:1:exon
so has part: feature:224267-224369:1:exon
so has part: feature:225502-226649:1:exon

XP_040511059.1
type: Protein
SIO_000068: ncbiprotein

position:214386:1
position: 214386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226649:1
position: 226649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214386-214426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214560-214602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214926-214991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215808-217823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220618-220807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221822-221949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222255-222374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222663-222724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223079-223227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223701-223795:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:224267-224369:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225502-226649:1:exon

BICRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
translation: MDDEDGRCLLDVICDPQALNDFLHGSEKIDSDDLLDSTGDAASAFFEGAGLHVQESSGNHLTAEQSQPSASVDLDFLEDDILGSPAGGGANLPSSEQPCDILQQSLQEANITEQTLEAEAELDLGSFQLPTLQPVVQAASDGAPQIFSGGADLIGLQQPAVLTHQALVQQSVGADVVNKAISVQPFLQQVGLGNVTIQPISNLQGLPNGSPGGALGIGPIQVVGQQVMAINQPAQQIIAKQVQPSQVATVPVGSYITQTAPEQQQVALTSAGVSPQGAGLVIQKNLPAVATTTLNGSSVFGGVSGAQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFGSNNATLTIQNEAALQQQKAQQNLTFMAGKPAQNVVLSGFPQGLPANVFKQPPPQQQALSKPMSVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGAPAVQIPQQLSALPANVGGQILAASHGGGQAHIITSQGPGGQLIANQALPAQILTNQNIAGQLNLGPVLASQNAHGTAHILSAPIQLQPGQVGQPALFQMPVSLAGSLTTQSQPSVAAPLPGAAAAAIGQTGQTVIQGVTLPSQVAMLNAADNLGQAVSIQPSGSSQSPGLLPPQPAPTAGLLPAAAADPPASILAIQPPAAPPAAPAPLQLSVQPPPPAPPPAPLPAASQPSPGLAASPEKIILGQAAAGAVINQDSMQMFLQQVPQGIILQTKQQTPTSQASPALSQFSSQSSSVLVSSQGQPVTVTATPTPAHSHAPTAGPPSSAGGTAPPPSDSKPFSSATAPIAAGKGPTATGKPGATLAMPQPVQTKPGVISSVSGLNLGKGPLQIQVVGKGLSQLVPSVQSQQLYDSKLGSLKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFHSFEDALQRLLPYHVYQGMLPSAQDYRKVDEEFEVVSTQLLKRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTMLALDKQLAKEKPDEYVSSSSRSQSLSLAAAQPSSSSSSSSSGLAPAADGSKAAAVQTATAINPTKLVIKHSGGSPSVTWAKASPSLDGDDDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPVCRVIKAAEQHPAAGQMNGTLEHGSAAPPEKKAAVSFCRLPLRKTYRENVDAFVAEKPTDKGSGAARADKAPLKQEDGTHKGPEGAAADKGRAEESSKLLFFGRGDARPLVLHGSPVPQKSDDPSSGLMKELAEVEEEFYHGMIKTEPPDHGPGAELTWEVPLPPTKRRKSESFEVDNASFSSDSPQDDSLNEHLQSAIDSILNLQQPQTGGQNVRTPSSSYNSSSSPFSSPVHRTDAYLAPNHNGGLGARTLNR
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: join(214386..214426,214560..214602,214926..214991,215808..217823,220618..220807,221822..221949,222255..222374,222663..222724,223079..223227,223701..223795,224267..224369,225502..226649)
location: region:214386-226649:1
so has part: feature:214386-214426:1:exon
so has part: feature:214560-214602:1:exon
so has part: feature:214926-214991:1:exon
so has part: feature:215808-217823:1:exon
so has part: feature:220618-220807:1:exon
so has part: feature:221822-221949:1:exon
so has part: feature:222255-222374:1:exon
so has part: feature:222663-222724:1:exon
so has part: feature:223079-223227:1:exon
so has part: feature:223701-223795:1:exon
so has part: feature:224267-224369:1:exon
so has part: feature:225502-226649:1:exon

XP_040511060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214386-214426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214560-214602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214926-214991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215808-217823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220618-220807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221822-221949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222255-222374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222663-222724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223079-223227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223701-223795:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:224267-224369:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225502-226649:1:exon

BICRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein isoform X2
translation: MDDEDGRCLLDVICDPQALNDFLHGSEKLHVQESSGNHLTAEQSQPSASVDLDFLEDDILGSPAGGGANLPSSEQPCDILQQSLQEANITEQTLEAEAELDLGSFQLPTLQPVVQAASDGAPQIFSGGADLIGLQQPAVLTHQALVQQSVGADVVNKAISVQPFLQQVGLGNVTIQPISNLQGLPNGSPGGALGIGPIQVVGQQVMAINQPAQQIIAKQVQPSQVATVPVGSYITQTAPEQQQVALTSAGVSPQGAGLVIQKNLPAVATTTLNGSSVFGGVSGAQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFGSNNATLTIQNEAALQQQKAQQNLTFMAGKPAQNVVLSGFPQGLPANVFKQPPPQQQALSKPMSVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGAPAVQIPQQLSALPANVGGQILAASHGGGQAHIITSQGPGGQLIANQALPAQILTNQNIAGQLNLGPVLASQNAHGTAHILSAPIQLQPGQVGQPALFQMPVSLAGSLTTQSQPSVAAPLPGAAAAAIGQTGQTVIQGVTLPSQVAMLNAADNLGQAVSIQPSGSSQSPGLLPPQPAPTAGLLPAAAADPPASILAIQPPAAPPAAPAPLQLSVQPPPPAPPPAPLPAASQPSPGLAASPEKIILGQAAAGAVINQDSMQMFLQQVPQGIILQTKQQTPTSQASPALSQFSSQSSSVLVSSQGQPVTVTATPTPAHSHAPTAGPPSSAGGTAPPPSDSKPFSSATAPIAAGKGPTATGKPGATLAMPQPVQTKPGVISSVSGLNLGKGPLQIQVVGKGLSQLVPSVQSQQLYDSKLGSLKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFHSFEDALQRLLPYHVYQGMLPSAQDYRKVDEEFEVVSTQLLKRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTMLALDKQLAKEKPDEYVSSSSRSQSLSLAAAQPSSSSSSSSSGLAPAADGSKAAAVQTATAINPTKLVIKHSGGSPSVTWAKASPSLDGDDDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPVCRVIKAAEQHPAAGQMNGTLEHGSAAPPEKKAAVSFCRLPLRKTYRENVDAFVAEKPTDKGSGAARADKAPLKQEDGTHKGPEGAAADKGRAEESSKLLFFGRGDARPLVLHGSPVPQKSDDPSSGLMKELAEVEEEFYHGMIKTEPPDHGPGAELTWEVPLPPTKRRKSESFEVDNASFSSDSPQDDSLNEHLQSAIDSILNLQQPQTGGQNVRTPSSSYNSSSSPFSSPVHRTDAYLAPNHNGGLGARTLNR
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: join(214386..214426,214560..214602,215808..217823,220618..220807,221822..221949,222255..222374,222663..222724,223079..223227,223701..223795,224267..224369,225502..226649)
location: region:214386-226649:1
so has part: feature:214386-214426:1:exon
so has part: feature:214560-214602:1:exon
so has part: feature:215808-217823:1:exon
so has part: feature:220618-220807:1:exon
so has part: feature:221822-221949:1:exon
so has part: feature:222255-222374:1:exon
so has part: feature:222663-222724:1:exon
so has part: feature:223079-223227:1:exon
so has part: feature:223701-223795:1:exon
so has part: feature:224267-224369:1:exon
so has part: feature:225502-226649:1:exon

XP_040511061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214386-214426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214560-214602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215808-217823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220618-220807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221822-221949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222255-222374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222663-222724:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223079-223227:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223701-223795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224267-224369:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225502-226649:1:exon

BICRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein isoform X2
translation: MDDEDGRCLLDVICDPQALNDFLHGSEKLHVQESSGNHLTAEQSQPSASVDLDFLEDDILGSPAGGGANLPSSEQPCDILQQSLQEANITEQTLEAEAELDLGSFQLPTLQPVVQAASDGAPQIFSGGADLIGLQQPAVLTHQALVQQSVGADVVNKAISVQPFLQQVGLGNVTIQPISNLQGLPNGSPGGALGIGPIQVVGQQVMAINQPAQQIIAKQVQPSQVATVPVGSYITQTAPEQQQVALTSAGVSPQGAGLVIQKNLPAVATTTLNGSSVFGGVSGAQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFGSNNATLTIQNEAALQQQKAQQNLTFMAGKPAQNVVLSGFPQGLPANVFKQPPPQQQALSKPMSVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGAPAVQIPQQLSALPANVGGQILAASHGGGQAHIITSQGPGGQLIANQALPAQILTNQNIAGQLNLGPVLASQNAHGTAHILSAPIQLQPGQVGQPALFQMPVSLAGSLTTQSQPSVAAPLPGAAAAAIGQTGQTVIQGVTLPSQVAMLNAADNLGQAVSIQPSGSSQSPGLLPPQPAPTAGLLPAAAADPPASILAIQPPAAPPAAPAPLQLSVQPPPPAPPPAPLPAASQPSPGLAASPEKIILGQAAAGAVINQDSMQMFLQQVPQGIILQTKQQTPTSQASPALSQFSSQSSSVLVSSQGQPVTVTATPTPAHSHAPTAGPPSSAGGTAPPPSDSKPFSSATAPIAAGKGPTATGKPGATLAMPQPVQTKPGVISSVSGLNLGKGPLQIQVVGKGLSQLVPSVQSQQLYDSKLGSLKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFHSFEDALQRLLPYHVYQGMLPSAQDYRKVDEEFEVVSTQLLKRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTMLALDKQLAKEKPDEYVSSSSRSQSLSLAAAQPSSSSSSSSSGLAPAADGSKAAAVQTATAINPTKLVIKHSGGSPSVTWAKASPSLDGDDDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPVCRVIKAAEQHPAAGQMNGTLEHGSAAPPEKKAAVSFCRLPLRKTYRENVDAFVAEKPTDKGSGAARADKAPLKQEDGTHKGPEGAAADKGRAEESSKLLFFGRGDARPLVLHGSPVPQKSDDPSSGLMKELAEVEEEFYHGMIKTEPPDHGPGAELTWEVPLPPTKRRKSESFEVDNASFSSDSPQDDSLNEHLQSAIDSILNLQQPQTGGQNVRTPSSSYNSSSSPFSSPVHRTDAYLAPNHNGGLGARTLNR
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: join(214386..214426,214560..214602,215808..217823,220618..220807,221822..221949,222255..222374,222663..222724,223079..223227,223701..223795,224267..224369,225502..226649)
location: region:214386-226649:1
so has part: feature:214386-214426:1:exon
so has part: feature:214560-214602:1:exon
so has part: feature:215808-217823:1:exon
so has part: feature:220618-220807:1:exon
so has part: feature:221822-221949:1:exon
so has part: feature:222255-222374:1:exon
so has part: feature:222663-222724:1:exon
so has part: feature:223079-223227:1:exon
so has part: feature:223701-223795:1:exon
so has part: feature:224267-224369:1:exon
so has part: feature:225502-226649:1:exon

XP_040511062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214386-214426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214560-214602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215808-217823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220618-220807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221822-221949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222255-222374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222663-222724:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223079-223227:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223701-223795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224267-224369:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225502-226649:1:exon

LOC107049991
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107049991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 229755..241641
location: region:229755-241641:1
so has part: feature:229755-241641:1:exon
subclass of: SO_0000010

107049991
type: Gene
SIO_000068: ncbigene

position:229755:1
position: 229755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241641:1
position: 241641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229755-241641:1:exon

LOC107049991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107049991
product: EH domain-containing protein 2-like
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144491.3
SIO_010081: LOC107049991
subclass of: SO_0000673
so part of: LOC107049991
location: join(229755..231125,231904..232001,234265..234677,235941..236105,241078..241641)
location: region:229755-241641:1
so has part: feature:229755-231125:1:exon
so has part: feature:231904-232001:1:exon
so has part: feature:234265-234677:1:exon
so has part: feature:235941-236105:1:exon
so has part: feature:241078-241641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229755-231125:1:exon

position:231125:1
position: 231125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231904-232001:1:exon

position:231904:1
position: 231904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232001:1
position: 232001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234265-234677:1:exon

position:234265:1
position: 234265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234677:1
position: 234677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235941-236105:1:exon

position:235941:1
position: 235941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236105:1
position: 236105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:241078-241641:1:exon

position:241078:1
position: 241078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107049991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107049991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EH domain-containing protein 2
translation: MFSWMRRHEKKSPEVVRTVTAGLKELYKKKLLPVEEFYRFHDFHSPALEDADFDNKPMVLVAGQYSTGKTTFIRYLLEEDIPGARVGPEPTTDSFVAIMHGDAAGITPGNALIVDPNKPFRKLNPFGNTFLNRFMCAHLPNQVLESISLIDTPGILSGAKQRVCRGYDFPAVLQWFAERVDLIILLFDAHKLEISDEFSEAIRALRGNEDKVRVVLNKADMVETQQLMRVYGALMWSLGKVFNTPEVLRVFIGSFWSEPLLIADNRRLFELEEQDLFQEIQNLPRNSALRKLNDLVKRARLVRVHAHILSRLKKEMPAVFGKGHKKKQLIAQLPLLFARIQMEQHIPPGDFPDCARMQEQLLAQDLTRFPALKPRLLEALEELLTRDIAALMPLLRREEGEAAPGVQGGAFEGARRGPFVEGAEEAEEEEGEGGEDEWVVTKDKAKYDEIFYGLCPLGGKLSGRQARGWMVGSKLPRSVLGRIWQLSDVDRDGMLDAEEFALAGHLIGAKLEGRGLPSDLPPRLVPPSKRRQKGSAE
SIO_010081: LOC107049991
subclass of: SO_0000673
so part of: LOC107049991
location: join(230728..231125,231904..232001,234265..234677,235941..236105,241078..241617)
location: region:230728-241617:1
so has part: feature:230728-231125:1:exon
so has part: feature:231904-232001:1:exon
so has part: feature:234265-234677:1:exon
so has part: feature:235941-236105:1:exon
so has part: feature:241078-241617:1:exon

XP_025000259.1
type: Protein
SIO_000068: ncbiprotein

position:230728:1
position: 230728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241617:1
position: 241617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230728-231125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231904-232001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234265-234677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235941-236105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241078-241617:1:exon

GLTSCR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: GLTSCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 243372..246886
location: region:243372-246886:1
so has part: feature:243372-246886:1:exon
subclass of: SO_0000010

107049993
type: Gene
SIO_000068: ncbigene

position:243372:1
position: 243372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246886:1
position: 246886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243372-246886:1:exon

GLTSCR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: GLTSCR2
product: glioma tumor suppressor candidate region gene 2, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273800.4
SIO_010081: GLTSCR2
subclass of: SO_0000673
so part of: GLTSCR2
location: join(243372..243600,243721..243785,243904..243991,244096..244316,244654..244724,244820..244915,245010..245114,245275..245460,245541..245716,245797..245863,246530..246606,246697..246753,246840..246886)
location: region:243372-246886:1
so has part: feature:243372-243600:1:exon
so has part: feature:243721-243785:1:exon
so has part: feature:243904-243991:1:exon
so has part: feature:244096-244316:1:exon
so has part: feature:244654-244724:1:exon
so has part: feature:244820-244915:1:exon
so has part: feature:245010-245114:1:exon
so has part: feature:245275-245460:1:exon
so has part: feature:245541-245716:1:exon
so has part: feature:245797-245863:1:exon
so has part: feature:246530-246606:1:exon
so has part: feature:246697-246753:1:exon
so has part: feature:246840-246886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243372-243600:1:exon

position:243600:1
position: 243600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243721-243785:1:exon

position:243721:1
position: 243721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243785:1
position: 243785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243904-243991:1:exon

position:243904:1
position: 243904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243991:1
position: 243991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244096-244316:1:exon

position:244096:1
position: 244096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244316:1
position: 244316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244654-244724:1:exon

position:244654:1
position: 244654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244724:1
position: 244724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244820-244915:1:exon

position:244820:1
position: 244820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244915:1
position: 244915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:245010-245114:1:exon

position:245010:1
position: 245010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245114:1
position: 245114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:245275-245460:1:exon

position:245275:1
position: 245275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245460:1
position: 245460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:245541-245716:1:exon

position:245541:1
position: 245541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245716:1
position: 245716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:245797-245863:1:exon

position:245797:1
position: 245797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245863:1
position: 245863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:246530-246606:1:exon

position:246530:1
position: 246530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246606:1
position: 246606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:246697-246753:1:exon

position:246697:1
position: 246697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246753:1
position: 246753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:246840-246886:1:exon

position:246840:1
position: 246840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLTSCR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: GLTSCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NOP53 isoform X1
translation: MAAVAESLSFLGLTPSARDPATAVRRRNRGPRNRKKGWKRWAGPEARLGREIGDFLEDVTLQQRVAGGLIAEQPDAGLFFVDTGNAEKGRKRKNKIREKPLHIDLVLQPDSKVPPPKDILSHQIPNGKKERRRRQFWERLAQRGVLPRAERRLQTRLQNAAAPPRGPPREKAPEKGRVDPGRSFYDIWADDNPLERALVGQDSWFLQQTQKQRVKRPPRLQQKPSQLPAVEVIAPGGSYNPTFEDHQALLLKAHEVEVMKKRAEDKVERQLRFPTAAEAPTAETVFREQCEGLLEESEGEEEEEEEQKEEAVGGAQPSDPPRPPLRPGKKTEQQRRKEKEARAQELRRRQEKAWRCRQQQLFRLRSLGRQLRRWEQELLRRRRAREAKRREMEGRPRRLGRIKYEDPALEVQLSDELAESLRTLKPEGSVLHDRFKSLQKRSLIEPRERAKFKRKYRLKYVEKRAFREVTL
SIO_010081: GLTSCR2
subclass of: SO_0000673
so part of: GLTSCR2
location: join(243401..243600,243721..243785,243904..243991,244096..244316,244654..244724,244820..244915,245010..245114,245275..245460,245541..245716,245797..245863,246530..246606,246697..246753,246840..246846)
location: region:243401-246846:1
so has part: feature:243401-243600:1:exon
so has part: feature:243721-243785:1:exon
so has part: feature:243904-243991:1:exon
so has part: feature:244096-244316:1:exon
so has part: feature:244654-244724:1:exon
so has part: feature:244820-244915:1:exon
so has part: feature:245010-245114:1:exon
so has part: feature:245275-245460:1:exon
so has part: feature:245541-245716:1:exon
so has part: feature:245797-245863:1:exon
so has part: feature:246530-246606:1:exon
so has part: feature:246697-246753:1:exon
so has part: feature:246840-246846:1:exon

XP_015129286.2
type: Protein
SIO_000068: ncbiprotein

position:243401:1
position: 243401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246846:1
position: 246846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243401-243600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243721-243785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243904-243991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244096-244316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244654-244724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244820-244915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245010-245114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:245275-245460:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245541-245716:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:245797-245863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246530-246606:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:246697-246753:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:246840-246846:1:exon

LOC107049826
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107049826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(247377..250893)
location: region:247377-250893:-1
so has part: feature:247377-250893:-1:exon
subclass of: SO_0000010

107049826
type: Gene
SIO_000068: ncbigene

position:247377:-1
position: 247377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250893:-1
position: 250893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247377-250893:-1:exon

LOC107049826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107049826
product: gap junction delta-2 protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_040655140.2
SIO_010081: LOC107049826
subclass of: SO_0000673
so part of: LOC107049826
location: complement(join(247377..248383,249875..250893))
location: region:247377-250893:-1
so has part: feature:249875-250893:-1:exon
so has part: feature:247377-248383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249875-250893:-1:exon

position:249875:-1
position: 249875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247377-248383:-1:exon

position:248383:-1
position: 248383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107049826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107049826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction delta-2 protein-like
translation: MAMALRVAALLVAVVAMAVGTMAAAPKHRPPALCPRPTAAARGRVWGERHRVRAPDGGGRSAAAVFWGGGRKGGEGKHRRFPAAPQRIAAASRHAAAAVPPVRPPEARNPPQCPPVPPAHSAGTLNASPRCSRCPQRPPTHCLPTPLPPPPARSRGRAARSRRSSGPRRARDRARLSPSGRRRRRWGRGAERGGGARWGRGGGGSRSGGGPGPAPPAPIAMGEWTILERLLEAAVQQHSTMIGRILLTVVVIFRILIVAIVGETVYEDEQTMFMCNTLQPGCNQACYDKAFPISHIRYWVFQIILVCTPSLCFITYSVHQAAKQRERRYSFLYPLLERDAKKARTLNGVLAPGADGGTKDEPECLEAKELPSTPPRRAKAKRQEGISRFYVIQVVFRNALEIGFLAGQYFLYGFNVPAIFECDRYPCVKEVECYVSRPTEKTVFLVFMFAVSGICVLLNLAELNHLGWRKVKAAVRGVQARRKSLVEVRKKDGAALTPAPTLGRTQSSESAYV
SIO_010081: LOC107049826
subclass of: SO_0000673
so part of: LOC107049826
location: complement(join(247573..248383,249875..250605))
location: region:247573-250605:-1
so has part: feature:249875-250605:-1:exon
so has part: feature:247573-248383:-1:exon

XP_040511074.1
type: Protein
SIO_000068: ncbiprotein

position:247573:-1
position: 247573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250605:-1
position: 250605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249875-250605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247573-248383:-1:exon

SELENOW
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: SelW
alternative label: SEPW1
gene: SELENOW
gene synonym: SelW; SEPW1
note: selenoprotein W; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 250514..252411
location: region:250514-252411:1
so has part: feature:250514-252411:1:exon
subclass of: SO_0000010

100310814
type: Gene
SIO_000068: ncbigene

position:250514:1
position: 250514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252411:1
position: 252411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250514-252411:1:exon

SELENOW
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: SelW
alternative label: SEPW1
gene: SELENOW
gene synonym: SelW; SEPW1
product: selenoprotein W, transcript variant 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001166327.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001166327.2
SIO_010081: SELENOW
subclass of: SO_0000673
so part of: SELENOW
location: join(250514..250632,250726..250750,250827..250880,250950..251024,251394..251689,252144..252411)
location: region:250514-252411:1
so has part: feature:250514-250632:1:exon
so has part: feature:250726-250750:1:exon
so has part: feature:250827-250880:1:exon
so has part: feature:250950-251024:1:exon
so has part: feature:251394-251689:1:exon
so has part: feature:252144-252411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250514-250632:1:exon

position:250632:1
position: 250632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250726-250750:1:exon

position:250726:1
position: 250726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250750:1
position: 250750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250827-250880:1:exon

position:250827:1
position: 250827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250880:1
position: 250880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:250950-251024:1:exon

position:250950:1
position: 250950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251024:1
position: 251024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:251394-251689:1:exon

position:251394:1
position: 251394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251689:1
position: 251689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:252144-252411:1:exon

position:252144:1
position: 252144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SELENOW
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: SelW
alternative label: SEPW1
gene: SELENOW
gene synonym: SelW; SEPW1
product: selenoprotein W, transcript variant 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001351374.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001351374.1
SIO_010081: SELENOW
subclass of: SO_0000673
so part of: SELENOW
location: join(250514..250632,250726..250750,250827..250880,250950..251024,251394..251689,252165..252411)
location: region:250514-252411:1
so has part: feature:250514-250632:1:exon
so has part: feature:250726-250750:1:exon
so has part: feature:250827-250880:1:exon
so has part: feature:250950-251024:1:exon
so has part: feature:251394-251689:1:exon
so has part: feature:252165-252411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250514-250632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250726-250750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250827-250880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250950-251024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251394-251689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:252165-252411:1:exon

position:252165:1
position: 252165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SELENOW
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: SelW
alternative label: SEPW1
gene: SELENOW
gene synonym: SelW; SEPW1
inference: similar to AA sequence (same species):RefSeq:NP_001338303.1
exception: annotated by transcript or proteomic data
note: UGA stop codon recoded as selenocysteine; The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
transl except: (pos:250733..250735,aa:Sec)
product: selenoprotein W
translation: MPLRVTVLYCGAUGYKPKYERLRAELEKRFPGALEMRGQGTQEVTGWFEVTVGSRLVHSKKNGDGFVDTDAKLQRIVAAIQAALP
SIO_010081: SELENOW
subclass of: SO_0000673
so part of: SELENOW
location: join(250604..250632,250726..250750,250827..250880,250950..251024,251394..251468)
location: region:250604-251468:1
so has part: feature:250604-250632:1:exon
so has part: feature:250726-250750:1:exon
so has part: feature:250827-250880:1:exon
so has part: feature:250950-251024:1:exon
so has part: feature:251394-251468:1:exon

NP_001338303.1
type: Protein
SIO_000068: ncbiprotein

position:250604:1
position: 250604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251468:1
position: 251468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250604-250632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250726-250750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250827-250880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250950-251024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251394-251468:1:exon

SELENOW
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: SelW
alternative label: SEPW1
gene: SELENOW
gene synonym: SelW; SEPW1
note: Selenocysteine; other site
SIO_010081: SELENOW
subclass of: SO_0000673
so part of: SELENOW
location: 250733..250735
location: region:250733-250735:1
so has part: feature:250733-250735:1:exon

position:250733:1
position: 250733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250735:1
position: 250735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250733-250735:1:exon

SELENOW
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: SelW
alternative label: SEPW1
gene: SELENOW
gene synonym: SelW; SEPW1
inference: similar to AA sequence (same species):RefSeq:NP_001159799.1
exception: annotated by transcript or proteomic data
note: UGA stop codon recoded as selenocysteine; The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
transl except: (pos:250733..250735,aa:Sec)
product: selenoprotein W
translation: MPLRVTVLYCGAUGYKPKYERLRAELEKRFPGALEMRGQGTQEVTGWFEVTVGSRLVHSKKNGDGFVDTDAKLQRIVAAIQAALP
SIO_010081: SELENOW
subclass of: SO_0000673
so part of: SELENOW
location: join(250604..250632,250726..250750,250827..250880,250950..251024,251394..251468)
location: region:250604-251468:1
so has part: feature:250604-250632:1:exon
so has part: feature:250726-250750:1:exon
so has part: feature:250827-250880:1:exon
so has part: feature:250950-251024:1:exon
so has part: feature:251394-251468:1:exon

NP_001159799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250604-250632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250726-250750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250827-250880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250950-251024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251394-251468:1:exon

SELENOW
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: SelW
alternative label: SEPW1
gene: SELENOW
gene synonym: SelW; SEPW1
note: Selenocysteine; other site
SIO_010081: SELENOW
subclass of: SO_0000673
so part of: SELENOW
location: 250733..250735
location: region:250733-250735:1
so has part: feature:250733-250735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250733-250735:1:exon

LOC107049828
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107049828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(252307..253324)
location: region:252307-253324:-1
so has part: feature:252307-253324:-1:exon
subclass of: SO_0000011

107049828
type: Gene
SIO_000068: ncbigene

position:252307:-1
position: 252307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253324:-1
position: 253324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252307-253324:-1:exon

LOC107049828
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC107049828
product: uncharacterized LOC107049828, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_001462172.4
SIO_010081: LOC107049828
subclass of: SO_0000673
so part of: LOC107049828
location: complement(join(252307..252828,253238..253324))
location: region:252307-253324:-1
so has part: feature:253238-253324:-1:exon
so has part: feature:252307-252828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253238-253324:-1:exon

position:253238:-1
position: 253238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252307-252828:-1:exon

position:252828:-1
position: 252828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100859629
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC100859629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 253401..256193
location: region:253401-256193:1
so has part: feature:253401-256193:1:exon
subclass of: SO_0000010

100859629
type: Gene
SIO_000068: ncbigene

position:253401:1
position: 253401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256193:1
position: 256193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253401-256193:1:exon

LOC100859629
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC100859629
product: histone H3.3-like
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144522.3
SIO_010081: LOC100859629
subclass of: SO_0000673
so part of: LOC100859629
location: join(253401..253517,254106..254252,254407..254560,255447..256193)
location: region:253401-256193:1
so has part: feature:253401-253517:1:exon
so has part: feature:254106-254252:1:exon
so has part: feature:254407-254560:1:exon
so has part: feature:255447-256193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253401-253517:1:exon

position:253517:1
position: 253517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254106-254252:1:exon

position:254106:1
position: 254106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254252:1
position: 254252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254407-254560:1:exon

position:254407:1
position: 254407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254560:1
position: 254560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255447-256193:1:exon

position:255447:1
position: 255447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100859629
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC100859629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3.3A
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC100859629
subclass of: SO_0000673
so part of: LOC100859629
location: join(254125..254252,254407..254560,255447..255575)
location: region:254125-255575:1
so has part: feature:254125-254252:1:exon
so has part: feature:254407-254560:1:exon
so has part: feature:255447-255575:1:exon

XP_025000290.1
type: Protein
SIO_000068: ncbiprotein

position:254125:1
position: 254125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255575:1
position: 255575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254125-254252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254407-254560:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255447-255575:1:exon

OTX5
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: CRX
gene: OTX5
gene synonym: CRX
note: orthodenticle-related homeobox 5; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 257930..263457
location: region:257930-263457:1
so has part: feature:257930-263457:1:exon
subclass of: SO_0000010

103875463
type: Gene
SIO_000068: ncbigene

position:257930:1
position: 257930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263457:1
position: 263457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257930-263457:1:exon

OTX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: CRX
gene: OTX5
gene synonym: CRX
product: orthodenticle-related homeobox 5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001301787.2
SIO_010081: OTX5
subclass of: SO_0000673
so part of: OTX5
location: join(257930..258076,258783..258887,259535..259686,261248..263457)
location: region:257930-263457:1
so has part: feature:257930-258076:1:exon
so has part: feature:258783-258887:1:exon
so has part: feature:259535-259686:1:exon
so has part: feature:261248-263457:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257930-258076:1:exon

position:258076:1
position: 258076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258783-258887:1:exon

position:258783:1
position: 258783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258887:1
position: 258887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:259535-259686:1:exon

position:259535:1
position: 259535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259686:1
position: 259686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261248-263457:1:exon

position:261248:1
position: 261248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OTX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: CRX
gene: OTX5
gene synonym: CRX
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cone-rod homeobox protein
translation: MMSYIKQPHYAVNGLTLAGPGMDLLHSAVGYPATPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQPKARPAKKKPTPPREAPNDAGGAGPYSPTQPGPAGTPGSAAPVSIWSPASISPVPDPLAAGSAPGLPRSAPFSAAPYNQTAPYGQSYGGSAAYFGGLDCGAYLSPMHPPLGAPGAALSPLGAPMGAHLTPSPAALSGQSFGAGLGFGAVDCLEYKEQAGAWKLNFNAADCLDYKEQSSWKFQVL
SIO_010081: OTX5
subclass of: SO_0000673
so part of: OTX5
location: join(258791..258887,259535..259686,261248..261862)
location: region:258791-261862:1
so has part: feature:258791-258887:1:exon
so has part: feature:259535-259686:1:exon
so has part: feature:261248-261862:1:exon

NP_001288716.1
type: Protein
SIO_000068: ncbiprotein

position:258791:1
position: 258791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261862:1
position: 261862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258791-258887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259535-259686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261248-261862:1:exon

OTX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: CRX
gene: OTX5
gene synonym: CRX
product: orthodenticle-related homeobox 5, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040655089.1
SIO_010081: OTX5
subclass of: SO_0000673
so part of: OTX5
location: join(258944..259686,261248..263457)
location: region:258944-263457:1
so has part: feature:258944-259686:1:exon
so has part: feature:261248-263457:1:exon

position:258944:1
position: 258944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258944-259686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261248-263457:1:exon

OTX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: CRX
gene: OTX5
gene synonym: CRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cone-rod homeobox protein isoform X1
translation: MGCCTEGLQMGLETRGCKGKCTERFAQGSAQSLHMGCCTEGLQTGLEAREHTGVHRGFACGVLHGGFAQGGLHVGFCAQGVARRGLQGGRCTGAAQVGLFAWGGGGCFAATPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQPKARPAKKKPTPPREAPNDAGGAGPYSPTQPGPAGTPGSAAPVSIWSPASISPVPDPLAAGSAPGLPRSAPFSAAPYNQTAPYGQSYGGSAAYFGGLDCGAYLSPMHPPLGAPGAALSPLGAPMGAHLTPSPAALSGQSFGAGLGFGAVDCLEYKEQAGAWKLNFNAADCLDYKEQSSWKFQVL
SIO_010081: OTX5
subclass of: SO_0000673
so part of: OTX5
location: join(259207..259686,261248..261862)
location: region:259207-261862:1
so has part: feature:259207-259686:1:exon
so has part: feature:261248-261862:1:exon

XP_040511023.1
type: Protein
SIO_000068: ncbiprotein

position:259207:1
position: 259207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259207-259686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261248-261862:1:exon

LOC124416939
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC124416939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 261953..263457
location: region:261953-263457:1
so has part: feature:261953-263457:1:exon
subclass of: SO_0000010

124416939
type: Gene
SIO_000068: ncbigene

position:261953:1
position: 261953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261953-263457:1:exon

LOC124416939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC124416939
product: uncharacterized LOC124416939, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040655141.1
SIO_010081: LOC124416939
subclass of: SO_0000673
so part of: LOC124416939
location: join(261953..262098,262279..263457)
location: region:261953-263457:1
so has part: feature:261953-262098:1:exon
so has part: feature:262279-263457:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261953-262098:1:exon

position:262098:1
position: 262098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262279-263457:1:exon

position:262279:1
position: 262279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124416939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC124416939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC124416939 isoform X1
translation: MDWSWGAQSAWSGPGGAAAPKDAASLHGALLRNRASLHGALLRNRASLHGALLRNSIPARSVTVEHSTAAWSIPAWGIPKECSIAAWSIIAWSISRTHSIPARGVSKECSIPVWGFPACITRRGWRISACSALAWSSPKEHSTPAWSTPRTCSTSAWSIPKECSTPAWSTFECSIPKECSIPARAVPACIALRVWRTFACSVPAWSGPARRIPRTCSVSAWCIPKERSVPAEHSQWLQHRCTAHPSGLQQPCNPCIPALCTPAWSIPPAAHPCSTAHPCALQLCVDHPCGVERCTCSMQRPCNTL
SIO_010081: LOC124416939
subclass of: SO_0000673
so part of: LOC124416939
location: join(261953..262098,262279..263050)
location: region:261953-263050:1
so has part: feature:261953-262098:1:exon
so has part: feature:262279-263050:1:exon

XP_040511075.1
type: Protein
SIO_000068: ncbiprotein

position:263050:1
position: 263050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261953-262098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262279-263050:1:exon

ATP5SL
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ATP5SL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 264968..267345
location: region:264968-267345:1
so has part: feature:264968-267345:1:exon
subclass of: SO_0000010

107050327
type: Gene
SIO_000068: ncbigene

position:264968:1
position: 264968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267345:1
position: 267345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264968-267345:1:exon

ATP5SL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATP5SL
product: ATP5S like
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015274099.4
SIO_010081: ATP5SL
subclass of: SO_0000673
so part of: ATP5SL
location: join(264968..264996,265387..265556,266102..266182,266282..266421,266511..266673,267109..267345)
location: region:264968-267345:1
so has part: feature:264968-264996:1:exon
so has part: feature:265387-265556:1:exon
so has part: feature:266102-266182:1:exon
so has part: feature:266282-266421:1:exon
so has part: feature:266511-266673:1:exon
so has part: feature:267109-267345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264968-264996:1:exon

position:264996:1
position: 264996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265387-265556:1:exon

position:265387:1
position: 265387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265556:1
position: 265556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266102-266182:1:exon

position:266102:1
position: 266102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266182:1
position: 266182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266282-266421:1:exon

position:266282:1
position: 266282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266421:1
position: 266421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:266511-266673:1:exon

position:266511:1
position: 266511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266673:1
position: 266673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:267109-267345:1:exon

position:267109:1
position: 267109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5SL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATP5SL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: distal membrane-arm assembly complex protein 2 isoform X1
translation: MAAALAIRGLRGGRIPPPPHPTGPLRGAASGALQRLGEWFYEVEVVLGWAERLRRRRLRRKNAHYSFIQSLHGHNVAAACFAMSCGGRVRFEGQQRWLCADSRGRWSPEVLQFHHVPVVAVDLSGSQLTYDGLDNFVLLTKLQHLDLSGCPHVDDWALGRLHVFGDSLQELSVARCPRVTERGLATLHQLPKLRCLDVGGLAVQSPGLLRILLEEMLPQCRVLGMEMEEGDPPEAPPELGQPPPLCDSAVIGGRVVPKWH
SIO_010081: ATP5SL
subclass of: SO_0000673
so part of: ATP5SL
location: join(264979..264996,265387..265556,266102..266182,266282..266421,266511..266673,267109..267319)
location: region:264979-267319:1
so has part: feature:264979-264996:1:exon
so has part: feature:265387-265556:1:exon
so has part: feature:266102-266182:1:exon
so has part: feature:266282-266421:1:exon
so has part: feature:266511-266673:1:exon
so has part: feature:267109-267319:1:exon

XP_015129585.3
type: Protein
SIO_000068: ncbiprotein

position:264979:1
position: 264979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267319:1
position: 267319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264979-264996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265387-265556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266102-266182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266282-266421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266511-266673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267109-267319:1:exon

BCKDHA
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: BCKDHA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267740..273177)
location: region:267740-273177:-1
so has part: feature:267740-273177:-1:exon
subclass of: SO_0000010

374210
type: Gene
SIO_000068: ncbigene

position:267740:-1
position: 267740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273177:-1
position: 273177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267740-273177:-1:exon

BCKDHA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: BCKDHA
product: branched chain keto acid dehydrogenase E1, alpha polypeptide
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144505.3
SIO_010081: BCKDHA
subclass of: SO_0000673
so part of: BCKDHA
location: complement(join(267740..268026,268839..269010,270061..270202,270289..270495,270859..271020,271135..271243,271334..271420,272167..272328,273070..273177))
location: region:267740-273177:-1
so has part: feature:273070-273177:-1:exon
so has part: feature:272167-272328:-1:exon
so has part: feature:271334-271420:-1:exon
so has part: feature:271135-271243:-1:exon
so has part: feature:270859-271020:-1:exon
so has part: feature:270289-270495:-1:exon
so has part: feature:270061-270202:-1:exon
so has part: feature:268839-269010:-1:exon
so has part: feature:267740-268026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273070-273177:-1:exon

position:273070:-1
position: 273070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272167-272328:-1:exon

position:272167:-1
position: 272167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272328:-1
position: 272328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:271334-271420:-1:exon

position:271334:-1
position: 271334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271420:-1
position: 271420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:271135-271243:-1:exon

position:271135:-1
position: 271135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271243:-1
position: 271243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270859-271020:-1:exon

position:270859:-1
position: 270859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271020:-1
position: 271020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270289-270495:-1:exon

position:270289:-1
position: 270289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270495:-1
position: 270495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:270061-270202:-1:exon

position:270061:-1
position: 270061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270202:-1
position: 270202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268839-269010:-1:exon

position:268839:-1
position: 268839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269010:-1
position: 269010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:267740-268026:-1:exon

position:268026:-1
position: 268026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCKDHA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: BCKDHA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
translation: MAALALRALRGRLLRAAPGRAGRGLGTARDFPSLEEKPQFPGASAEFADRLEFIQPNVISGIPVYRVMDRQGHIVSPSEDPQLPKELVLKLYKTMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVLMYRGYPLDLFMAQCYGNASDPGRGRQMPVHYGCRERHFVTISSPLATQIPQAVGAAYAIKRADASRAVICYFGEGAASEGDAHAGFNFAATLECPIVFFCRNNGYAISTPTSEQYRGDGIAARGPGYGLMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYMQGRGWWDEEQEKGWRKSSRKKVMEAFEQAERKPKPNPQHLFSDVYREMPPNLRRQRAALERHLQHYGEHYPMELYEK
SIO_010081: BCKDHA
subclass of: SO_0000673
so part of: BCKDHA
location: complement(join(267856..268026,268839..269010,270061..270202,270289..270495,270859..271020,271135..271243,271334..271420,272167..272328,273070..273153))
location: region:267856-273153:-1
so has part: feature:273070-273153:-1:exon
so has part: feature:272167-272328:-1:exon
so has part: feature:271334-271420:-1:exon
so has part: feature:271135-271243:-1:exon
so has part: feature:270859-271020:-1:exon
so has part: feature:270289-270495:-1:exon
so has part: feature:270061-270202:-1:exon
so has part: feature:268839-269010:-1:exon
so has part: feature:267856-268026:-1:exon

XP_025000273.1
type: Protein
SIO_000068: ncbiprotein

position:267856:-1
position: 267856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273153:-1
position: 273153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273070-273153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272167-272328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271334-271420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271135-271243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270859-271020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270289-270495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270061-270202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268839-269010:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267856-268026:-1:exon

EXOSC5
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: EXOSC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 273300..275441
location: region:273300-275441:1
so has part: feature:273300-275441:1:exon
subclass of: SO_0000010

100858931
type: Gene
SIO_000068: ncbigene

position:273300:1
position: 273300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275441:1
position: 275441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273300-275441:1:exon

EXOSC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: EXOSC5
product: exosome component 5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015272495.4
SIO_010081: EXOSC5
subclass of: SO_0000673
so part of: EXOSC5
location: join(273300..273416,273608..273721,274098..274219,274378..274518,275005..275094,275214..275441)
location: region:273300-275441:1
so has part: feature:273300-273416:1:exon
so has part: feature:273608-273721:1:exon
so has part: feature:274098-274219:1:exon
so has part: feature:274378-274518:1:exon
so has part: feature:275005-275094:1:exon
so has part: feature:275214-275441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273300-273416:1:exon

position:273416:1
position: 273416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273608-273721:1:exon

position:273608:1
position: 273608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273721:1
position: 273721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274098-274219:1:exon

position:274098:1
position: 274098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274219:1
position: 274219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274378-274518:1:exon

position:274378:1
position: 274378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274518:1
position: 274518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275005-275094:1:exon

position:275005:1
position: 275005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275094:1
position: 275094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:275214-275441:1:exon

position:275214:1
position: 275214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EXOSC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: EXOSC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exosome complex component RRP46
translation: MEVAEEAAGCSLRPFSCEQGLLSRPDGSATFVQGDTSVLAGLYGPAEVKGSRESPDGATVEVLLRPKVGLPGVAERSREQLLRRTFEAVLLGSLHPRTSITVVLQVLSDAGSLLACCLNAACMGLLDAGLPLSSLFCGVTCALDPHGDIILDPTARQEQEAHAVLTFAIDSAQRKVLATTTRGSCSAEEMQRCLVAAQRAADTIFQFYRDCVQRKYSKS
SIO_010081: EXOSC5
subclass of: SO_0000673
so part of: EXOSC5
location: join(273317..273416,273608..273721,274098..274219,274378..274518,275005..275094,275214..275306)
location: region:273317-275306:1
so has part: feature:273317-273416:1:exon
so has part: feature:273608-273721:1:exon
so has part: feature:274098-274219:1:exon
so has part: feature:274378-274518:1:exon
so has part: feature:275005-275094:1:exon
so has part: feature:275214-275306:1:exon

XP_015127981.1
type: Protein
SIO_000068: ncbiprotein

position:273317:1
position: 273317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275306:1
position: 275306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273317-273416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273608-273721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274098-274219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274378-274518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275005-275094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275214-275306:1:exon

B9D2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: B9D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 275730..277748
location: region:275730-277748:1
so has part: feature:275730-277748:1:exon
subclass of: SO_0000010

112530472
type: Gene
SIO_000068: ncbigene

position:275730:1
position: 275730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277748:1
position: 277748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275730-277748:1:exon

B9D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: B9D2
product: B9 domain containing 2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025144520.3
SIO_010081: B9D2
subclass of: SO_0000673
so part of: B9D2
location: join(275730..275790,276343..276433,276504..276629,277409..277748)
location: region:275730-277748:1
so has part: feature:275730-275790:1:exon
so has part: feature:276343-276433:1:exon
so has part: feature:276504-276629:1:exon
so has part: feature:277409-277748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275730-275790:1:exon

position:275790:1
position: 275790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276343-276433:1:exon

position:276343:1
position: 276343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276433:1
position: 276433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276504-276629:1:exon

position:276504:1
position: 276504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276629:1
position: 276629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277409-277748:1:exon

position:277409:1
position: 277409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B9D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: B9D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B9 domain-containing protein 2
translation: MAEVHLIGQLLGASGFSQRRLFCKWGLHAGGAWKLLGGLCEGQTQVDDPQADDMAHWCHPLDVHFATKGLQGWPRLHLQVWHQDSLGRTELLGYGFCHVPSSPGCHALSCVTWRPRGSGVTQRLRHRLLGGGPQLRAPDLIYAGADRFRLRTEAAGTVHVELGVLLRHFGRYGVQC
SIO_010081: B9D2
subclass of: SO_0000673
so part of: B9D2
location: join(276346..276433,276504..276629,277409..277725)
location: region:276346-277725:1
so has part: feature:276346-276433:1:exon
so has part: feature:276504-276629:1:exon
so has part: feature:277409-277725:1:exon

XP_025000288.2
type: Protein
SIO_000068: ncbiprotein

position:276346:1
position: 276346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277725:1
position: 277725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276346-276433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276504-276629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277409-277725:1:exon

TGFB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
note: transforming growth factor beta 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 279619..285137
location: region:279619-285137:1
so has part: feature:279619-285137:1:exon
subclass of: SO_0000010

100873157
type: Gene
SIO_000068: ncbigene

position:279619:1
position: 279619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285137:1
position: 285137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279619-285137:1:exon

TGFB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
product: transforming growth factor beta 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001318456.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 4 substitutions, 1 frameshift, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001318456.1
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: join(279619..279670,280599..281039,282461..282636,282903..283020,283104..283190,283302..283452,284075..284234,284849..285137)
location: region:279619-285137:1
so has part: feature:279619-279670:1:exon
so has part: feature:280599-281039:1:exon
so has part: feature:282461-282636:1:exon
so has part: feature:282903-283020:1:exon
so has part: feature:283104-283190:1:exon
so has part: feature:283302-283452:1:exon
so has part: feature:284075-284234:1:exon
so has part: feature:284849-285137:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279619-279670:1:exon

position:279670:1
position: 279670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280599-281039:1:exon

position:280599:1
position: 280599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281039:1
position: 281039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282461-282636:1:exon

position:282461:1
position: 282461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282636:1
position: 282636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:282903-283020:1:exon

position:282903:1
position: 282903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283020:1
position: 283020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283104-283190:1:exon

position:283104:1
position: 283104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283190:1
position: 283190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:283302-283452:1:exon

position:283302:1
position: 283302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283452:1
position: 283452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284075-284234:1:exon

position:284075:1
position: 284075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284234:1
position: 284234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:284849-285137:1:exon

position:284849:1
position: 284849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TGFB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
inference: similar to AA sequence (same species):RefSeq:NP_001305385.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution, 1 frameshift compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: transforming growth factor beta-1 proprotein precursor
translation: MDPSPLLALLLLLLGAARALSTCQRLDLEAAKKKRIEAVRGQILSKLRLTAPPPASETPPRPLPDDVRALYNSTQELLKQRARLRPPPDGPDEYWAKELRRIPMETTWDGPMEHWQPQSHSIFFVFNVSRVRAEVGGRALLHRAELRMLRQKAAADSAGTEQRLELYQGYGNASWRYLHGRSVRATADDEWLSFDVTDAVHQWLSGSELLGVFKLSVHCPCEMGPGHADEMRISIEGFEQQRGDMQSIAKKHRRVPYVLAMALPAERANELHSARRRRDLDTDYCFGPGTDEKNCCVRPLYIDFRKDLQWKWIHEPKGYMANFCMGPCPYIWSADTQYTKVLALYNQHNPGASAAPCCVPQTLDPLPIIYYVGRNVRVEQLSNMVVRACKCS
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: join(280711..281039,282461..282636,282903..283020,283104..283190,283302..283452,284075..284234,284849..285007)
location: region:280711-285007:1
so has part: feature:280711-281039:1:exon
so has part: feature:282461-282636:1:exon
so has part: feature:282903-283020:1:exon
so has part: feature:283104-283190:1:exon
so has part: feature:283302-283452:1:exon
so has part: feature:284075-284234:1:exon
so has part: feature:284849-285007:1:exon

NP_001305385.1
type: Protein
SIO_000068: ncbiprotein

position:280711:1
position: 280711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285007:1
position: 285007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280711-281039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282461-282636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282903-283020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283104-283190:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283302-283452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284075-284234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284849-285007:1:exon

TGFB1
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: 280711..280767
location: region:280711-280767:1
so has part: feature:280711-280767:1:exon

position:280767:1
position: 280767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280711-280767:1:exon

TGFB1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
note: propagated from UniProtKB/Swiss-Prot (P09531.3); Region: Straightjacket domain. /evidence=ECO:0000250|UniProtKB:P07200
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: 280768..280902
location: region:280768-280902:1
so has part: feature:280768-280902:1:exon

position:280768:1
position: 280768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280902:1
position: 280902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280768-280902:1:exon

TGFB1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
note: propagated from UniProtKB/Swiss-Prot (P09531.3); Region: Arm domain. /evidence=ECO:0000250|UniProtKB:P07200
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: join(280903..281039,282461..282636,282903..283020,283104..283190,283302..283404)
location: region:280903-283404:1
so has part: feature:280903-281039:1:exon
so has part: feature:282461-282636:1:exon
so has part: feature:282903-283020:1:exon
so has part: feature:283104-283190:1:exon
so has part: feature:283302-283404:1:exon

position:280903:1
position: 280903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283404:1
position: 283404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280903-281039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282461-282636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282903-283020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283104-283190:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283302-283404:1:exon

TGFB1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P09531.3); glycosylation site
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: 280924..280926
location: region:280924-280926:1
so has part: feature:280924-280926:1:exon

position:280924:1
position: 280924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280926:1
position: 280926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280924-280926:1:exon

TGFB1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P09531.3); glycosylation site
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: 282510..282512
location: region:282510-282512:1
so has part: feature:282510-282512:1:exon

position:282510:1
position: 282510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282512:1
position: 282512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282510-282512:1:exon

TGFB1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P09531.3); glycosylation site
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: 282911..282913
location: region:282911-282913:1
so has part: feature:282911-282913:1:exon

position:282911:1
position: 282911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282913:1
position: 282913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282911-282913:1:exon

TGFB1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
note: propagated from UniProtKB/Swiss-Prot (P09531.3); Region: Bowtie tail. /evidence=ECO:0000250|UniProtKB:P01137
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: join(283144..283190,283302..283341)
location: region:283144-283341:1
so has part: feature:283144-283190:1:exon
so has part: feature:283302-283341:1:exon

position:283144:1
position: 283144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283341:1
position: 283341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283144-283190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283302-283341:1:exon

TGFB1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: TGF-beta4
alternative label: TGFB4
gene: TGFB1
gene synonym: TGF-beta4; TGFB4
note: propagated from UniProtKB/Swiss-Prot (P09531.3); Region: Cell attachment site. /evidence=ECO:0000255
SIO_010081: TGFB1
subclass of: SO_0000673
so part of: TGFB1
location: 283315..283323
location: region:283315-283323:1
so has part: feature:283315-283323:1:exon

position:283315:1
position: 283315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283323:1
position: 283323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283315-283323:1:exon

CCDC97
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: CCDC97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(285846..290206)
location: region:285846-290206:-1
so has part: feature:285846-290206:-1:exon
subclass of: SO_0000010

101748852
type: Gene
SIO_000068: ncbigene

position:285846:-1
position: 285846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290206:-1
position: 290206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285846-290206:-1:exon

CCDC97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CCDC97
product: coiled-coil domain containing 97
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655094.2
SIO_010081: CCDC97
subclass of: SO_0000673
so part of: CCDC97
location: complement(join(285846..286265,286876..287011,287636..287866,288695..289808,290178..290206))
location: region:285846-290206:-1
so has part: feature:290178-290206:-1:exon
so has part: feature:288695-289808:-1:exon
so has part: feature:287636-287866:-1:exon
so has part: feature:286876-287011:-1:exon
so has part: feature:285846-286265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290178-290206:-1:exon

position:290178:-1
position: 290178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288695-289808:-1:exon

position:288695:-1
position: 288695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289808:-1
position: 289808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287636-287866:-1:exon

position:287636:-1
position: 287636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287866:-1
position: 287866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:286876-287011:-1:exon

position:286876:-1
position: 286876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287011:-1
position: 287011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:285846-286265:-1:exon

position:286265:-1
position: 286265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CCDC97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 97
translation: MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE
SIO_010081: CCDC97
subclass of: SO_0000673
so part of: CCDC97
location: complement(join(286157..286265,286876..287011,287636..287866,288695..289682))
location: region:286157-289682:-1
so has part: feature:288695-289682:-1:exon
so has part: feature:287636-287866:-1:exon
so has part: feature:286876-287011:-1:exon
so has part: feature:286157-286265:-1:exon

XP_040511028.1
type: Protein
SIO_000068: ncbiprotein

position:286157:-1
position: 286157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289682:-1
position: 289682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288695-289682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287636-287866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286876-287011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286157-286265:-1:exon

HNRNPUL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: HNRNPUL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(290537..298773)
location: region:290537-298773:-1
so has part: feature:290537-298773:-1:exon
subclass of: SO_0000010

776596
type: Gene
SIO_000068: ncbigene

position:290537:-1
position: 290537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298773:-1
position: 298773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290537-298773:-1:exon

HNRNPUL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: HNRNPUL1
product: heterogeneous nuclear ribonucleoprotein U like 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
transcript id: XM_025144479.3
SIO_010081: HNRNPUL1
subclass of: SO_0000673
so part of: HNRNPUL1
location: complement(join(290537..291166,291651..291806,291897..292102,292674..293009,293824..293992,295021..295149,295833..295955,296033..296299,296382..296494,296576..296675,296752..296891,296976..297049,297145..297606,297707..297835,298566..298773))
location: region:290537-298773:-1
so has part: feature:298566-298773:-1:exon
so has part: feature:297707-297835:-1:exon
so has part: feature:297145-297606:-1:exon
so has part: feature:296976-297049:-1:exon
so has part: feature:296752-296891:-1:exon
so has part: feature:296576-296675:-1:exon
so has part: feature:296382-296494:-1:exon
so has part: feature:296033-296299:-1:exon
so has part: feature:295833-295955:-1:exon
so has part: feature:295021-295149:-1:exon
so has part: feature:293824-293992:-1:exon
so has part: feature:292674-293009:-1:exon
so has part: feature:291897-292102:-1:exon
so has part: feature:291651-291806:-1:exon
so has part: feature:290537-291166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298566-298773:-1:exon

position:298566:-1
position: 298566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297707-297835:-1:exon

position:297707:-1
position: 297707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297835:-1
position: 297835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297145-297606:-1:exon

position:297145:-1
position: 297145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297606:-1
position: 297606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296976-297049:-1:exon

position:296976:-1
position: 296976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297049:-1
position: 297049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296752-296891:-1:exon

position:296752:-1
position: 296752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296891:-1
position: 296891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:296576-296675:-1:exon

position:296576:-1
position: 296576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296675:-1
position: 296675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:296382-296494:-1:exon

position:296382:-1
position: 296382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296494:-1
position: 296494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:296033-296299:-1:exon

position:296033:-1
position: 296033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296299:-1
position: 296299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:295833-295955:-1:exon

position:295833:-1
position: 295833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295955:-1
position: 295955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:295021-295149:-1:exon

position:295021:-1
position: 295021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295149:-1
position: 295149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:293824-293992:-1:exon

position:293824:-1
position: 293824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293992:-1
position: 293992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:292674-293009:-1:exon

position:292674:-1
position: 292674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293009:-1
position: 293009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:291897-292102:-1:exon

position:291897:-1
position: 291897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292102:-1
position: 292102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:291651-291806:-1:exon

position:291651:-1
position: 291651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291806:-1
position: 291806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:290537-291166:-1:exon

position:291166:-1
position: 291166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HNRNPUL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: HNRNPUL1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
translation: MDVRRLRVNELKEELGRRGLDTRGLKAELAERLQAALEAEEARRGPGGDAASDGHYGLDNNSHPGEPQGYQPYEHSKQDNESSYERRPLDPEHPSVHPEMAGTQTRRPRAHLHRAAPQLQHPPPTYSLPPPPTYGAPPTAYGPPPSAYSAPPAYSAPTPGYSAPTPGYSAPPPTYSTPAYNPPPPTTYNAPTYSAPPPPAYNAPVPPYNAPPGAYSAPDPSQPRPQQPQQPRKRPYEEQRGRGYYEHREEKRGRSPQPPAEDEEEDFDETLVAVDTYNCDLHFKVARDRYSGYPLTIEGFAYLWSGARATYGARQGRVCYEMKVNEEISVKHLPASEPDPHVVRVGWSLDSCSTQLGEEPFSYGYGGTGKKSTNCKFENYGETFAENDVIACLVDFECGEEVEMSFMKNGKWLGVAYRVRKDVLAGRALFPHVLVKNCAIEFNFGQREDTYFSVPPGFTFIQHLPVAERVRGTTGPKSKAECEILMMVGLPAAGKTTWAVKHAAANPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAVVICPTDDDLRERTVRRTDEEGKDVPDHAVLEMKANFTLPEPGDFLDSVLFVELQRDEAAELVRQYNEEGRKAGPPPEKRFDGRPSPFRGRGGGGGGGGFQRFDGRGAAAAPPPPQSGGSRGGFQGRGGGAGGGFRGGGGGGGGGGAFNRSSYAPNRWGAAAATTNSRDSRGAYSRPAPPPSGYSPARPPGPYKAGGTTPPASSNAPSSYNQGQQPNYSQPYGQGGYNQGYPPTYGYSGYGSYSQSYPQPPPPAGQSYNQSYNQYPQYTQQWGPYYQQPPPWPPYYGSYDYSSYTGSSQGGSSSAQ
SIO_010081: HNRNPUL1
subclass of: SO_0000673
so part of: HNRNPUL1
location: complement(join(291047..291166,291651..291806,291897..292102,292674..293009,293824..293992,295021..295149,295833..295955,296033..296299,296382..296494,296576..296675,296752..296891,296976..297049,297145..297606,297707..297835,298566..298731))
location: region:291047-298731:-1
so has part: feature:298566-298731:-1:exon
so has part: feature:297707-297835:-1:exon
so has part: feature:297145-297606:-1:exon
so has part: feature:296976-297049:-1:exon
so has part: feature:296752-296891:-1:exon
so has part: feature:296576-296675:-1:exon
so has part: feature:296382-296494:-1:exon
so has part: feature:296033-296299:-1:exon
so has part: feature:295833-295955:-1:exon
so has part: feature:295021-295149:-1:exon
so has part: feature:293824-293992:-1:exon
so has part: feature:292674-293009:-1:exon
so has part: feature:291897-292102:-1:exon
so has part: feature:291651-291806:-1:exon
so has part: feature:291047-291166:-1:exon

XP_025000247.2
type: Protein
SIO_000068: ncbiprotein

position:291047:-1
position: 291047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298731:-1
position: 298731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298566-298731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297707-297835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297145-297606:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296976-297049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296752-296891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296576-296675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296382-296494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296033-296299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:295833-295955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:295021-295149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:293824-293992:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292674-293009:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:291897-292102:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:291651-291806:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:291047-291166:-1:exon

PRX
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300758..305782
location: region:300758-305782:1
so has part: feature:300758-305782:1:exon
subclass of: SO_0000010

107049204
type: Gene
SIO_000068: ncbigene

position:300758:1
position: 300758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305782:1
position: 305782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300758-305782:1:exon

PRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PRX
product: periaxin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015272491.4
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(300758..300940,302309..302405,303396..303516,304224..304405,305146..305781)
location: region:300758-305781:1
so has part: feature:300758-300940:1:exon
so has part: feature:302309-302405:1:exon
so has part: feature:303396-303516:1:exon
so has part: feature:304224-304405:1:exon
so has part: feature:305146-305781:1:exon

position:305781:1
position: 305781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300758-300940:1:exon

position:300940:1
position: 300940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:302309-302405:1:exon

position:302309:1
position: 302309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302405:1
position: 302405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303396-303516:1:exon

position:303396:1
position: 303396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303516:1
position: 303516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:304224-304405:1:exon

position:304224:1
position: 304224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304405:1
position: 304405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:305146-305781:1:exon

position:305146:1
position: 305146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WAS/WASL-interacting protein family member 3 isoform X3
translation: MAAAGAAPPRSLFCPPPPELWGHDRRRRHRQSPPPSCLLLTPSAPHCAPPPNCSTMEPPRAGPEDAQELLVETPAERGVGAVQLAGDRDGVFVLEAQRGSGLRQGDRLLSARVFFERSEDAAQVLRSARQCRVSFCLKRRVPPPRAPPAPTAPDARGPLAKVARLNLLSLTALRKGPPAPPPVDVELALPKLSLLSPRAVPPPGPPSVTTTTEGGIPEKGRVAEGGVPKVGVPRVGVPPVPPGGGGSAGAVVGHRGAQSGGDAGAARSRRRHRRNFGSKTAQIGTFVPQSLR
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(300846..300940,302309..302405,303396..303516,304224..304405,305146..305529)
location: region:300846-305529:1
so has part: feature:300846-300940:1:exon
so has part: feature:302309-302405:1:exon
so has part: feature:303396-303516:1:exon
so has part: feature:304224-304405:1:exon
so has part: feature:305146-305529:1:exon

XP_015127977.3
type: Protein
SIO_000068: ncbiprotein

position:300846:1
position: 300846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305529:1
position: 305529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300846-300940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302309-302405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303396-303516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304224-304405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305146-305529:1:exon

PRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PRX
product: periaxin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_025144508.3
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(302811..303516,304224..304393,305146..305782)
location: region:302811-305782:1
so has part: feature:302811-303516:1:exon
so has part: feature:304224-304393:1:exon
so has part: feature:305146-305782:1:exon

position:302811:1
position: 302811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302811-303516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304224-304393:1:exon

position:304393:1
position: 304393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305146-305782:1:exon

PRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PRX
product: periaxin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_025144507.3
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(302812..303516,304224..304405,305146..305780)
location: region:302812-305780:1
so has part: feature:302812-303516:1:exon
so has part: feature:304224-304405:1:exon
so has part: feature:305146-305780:1:exon

position:302812:1
position: 302812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305780:1
position: 305780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302812-303516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304224-304405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305146-305780:1:exon

PRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin cytoskeleton-regulatory complex protein PAN1 isoform X1
translation: MGGSHCVSLRSLTVSLRSLTVSLWALTVSLWGLSLCVPMGSHCVPMGSHCVTLRSLTVSLWGSLTVCPYGGVSLCVPTVPHCVPTVPHCVPTVPHCVPMGSHCVSLWGGLTVCPSSPSLCPYGVPHCVPPVPHRVPVCPHRVPVRPAAPQDAQELLVETPAERGVGAVQLAGDRDGVFVLEAQRGSGLRQGDRLLSARVFFERSEDAAQVLRSARQCRVSFCLKRRVPPPRAPPAPTAPDARGPLAKVARLNLLSLTALRKGPPAPPPVDVELALPKLSLLSPRAVPPPGPPSVTTTTEGGIPEKGRVAEGGVPKVGVPRVGVPPVPPGGGGSAGAVVGHRGAQSGGDAGAARSRRRHRRNFGSKTAQIGTFVPQSLR
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(302946..303516,304224..304405,305146..305529)
location: region:302946-305529:1
so has part: feature:302946-303516:1:exon
so has part: feature:304224-304405:1:exon
so has part: feature:305146-305529:1:exon

XP_025000275.2
type: Protein
SIO_000068: ncbiprotein

position:302946:1
position: 302946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302946-303516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304224-304405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305146-305529:1:exon

PRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin cytoskeleton-regulatory complex protein PAN1 isoform X2
translation: MGGSHCVSLRSLTVSLRSLTVSLWALTVSLWGLSLCVPMGSHCVPMGSHCVTLRSLTVSLWGSLTVCPYGGVSLCVPTVPHCVPTVPHCVPTVPHCVPMGSHCVSLWGGLTVCPSSPSLCPYGVPHCVPPVPHRVPVCPHRVPVRPAAPQDAQELLVETPAERGVGAVQLAGDRDGVFVLEAQRGSGLRQGDRLLSARVFFERSEDAAQVLRSARQCRVSFCLKRRVPPPRAPPAPTAPDARGPLAKNLLSLTALRKGPPAPPPVDVELALPKLSLLSPRAVPPPGPPSVTTTTEGGIPEKGRVAEGGVPKVGVPRVGVPPVPPGGGGSAGAVVGHRGAQSGGDAGAARSRRRHRRNFGSKTAQIGTFVPQSLR
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(302946..303516,304224..304393,305146..305529)
location: region:302946-305529:1
so has part: feature:302946-303516:1:exon
so has part: feature:304224-304393:1:exon
so has part: feature:305146-305529:1:exon

XP_025000276.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302946-303516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304224-304393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305146-305529:1:exon

PLD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(305865..317050)
location: region:305865-317050:-1
so has part: feature:305865-317050:-1:exon
subclass of: SO_0000010

107049989
type: Gene
SIO_000068: ncbigene

position:305865:-1
position: 305865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317050:-1
position: 317050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305865-317050:-1:exon

PLD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PLD3
product: phospholipase D family member 3, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144498.3
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(305865..307432,308541..308640,309593..309758,310657..310814,311285..311485,312179..312306,312946..313066,313820..313991,315119..315243,315327..315380,315919..315969,316957..317050))
location: region:305865-317050:-1
so has part: feature:316957-317050:-1:exon
so has part: feature:315919-315969:-1:exon
so has part: feature:315327-315380:-1:exon
so has part: feature:315119-315243:-1:exon
so has part: feature:313820-313991:-1:exon
so has part: feature:312946-313066:-1:exon
so has part: feature:312179-312306:-1:exon
so has part: feature:311285-311485:-1:exon
so has part: feature:310657-310814:-1:exon
so has part: feature:309593-309758:-1:exon
so has part: feature:308541-308640:-1:exon
so has part: feature:305865-307432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316957-317050:-1:exon

position:316957:-1
position: 316957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315919-315969:-1:exon

position:315919:-1
position: 315919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315969:-1
position: 315969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315327-315380:-1:exon

position:315327:-1
position: 315327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315380:-1
position: 315380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315119-315243:-1:exon

position:315119:-1
position: 315119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315243:-1
position: 315243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313820-313991:-1:exon

position:313820:-1
position: 313820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313991:-1
position: 313991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312946-313066:-1:exon

position:312946:-1
position: 312946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313066:-1
position: 313066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312179-312306:-1:exon

position:312179:-1
position: 312179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312306:-1
position: 312306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:311285-311485:-1:exon

position:311285:-1
position: 311285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311485:-1
position: 311485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:310657-310814:-1:exon

position:310657:-1
position: 310657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310814:-1
position: 310814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:309593-309758:-1:exon

position:309593:-1
position: 309593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309758:-1
position: 309758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:308541-308640:-1:exon

position:308541:-1
position: 308541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308640:-1
position: 308640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:305865-307432:-1:exon

position:307432:-1
position: 307432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PLD3
product: phospholipase D family member 3, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655092.2
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(305865..307432,308541..308640,309593..309758,310657..310814,311285..311485,312179..312306,312946..313066,313820..313991,315119..315243,315327..315380,315919..316065))
location: region:305865-316065:-1
so has part: feature:315919-316065:-1:exon
so has part: feature:315327-315380:-1:exon
so has part: feature:315119-315243:-1:exon
so has part: feature:313820-313991:-1:exon
so has part: feature:312946-313066:-1:exon
so has part: feature:312179-312306:-1:exon
so has part: feature:311285-311485:-1:exon
so has part: feature:310657-310814:-1:exon
so has part: feature:309593-309758:-1:exon
so has part: feature:308541-308640:-1:exon
so has part: feature:305865-307432:-1:exon

position:316065:-1
position: 316065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315919-316065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315327-315380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315119-315243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313820-313991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312946-313066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312179-312306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311285-311485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310657-310814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309593-309758:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308541-308640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305865-307432:-1:exon

PLD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exonuclease PLD3 isoform X1
translation: MKPYVVYEKLPPMDPPAPKDSPRRLLLPAVLCALLGSLSLLLLLPCFGLGGAAVLQGQSGDSGCGDTCRAVLVESTPQGVPPGPHPSTFSSWLRIIGTARRSLDIASFYWTLSNRDTATHEPSAAPGERILAELLQLPRRGVAVRVAVSAPTHTTPMGDLLALQSSGAAVRAVDVGRLAGGVLHTKLWVADGAHVYLGSANMDWRSLTQVKELGVAIYNCSCVAQDVAKVFEAYWALGAPNASIPTPWPSNFSTPFNMETPLRLRLNGTPTALYFSSSPPSFCAAGRTPDLNAVLGVIDAAQQFISVAVMSYLPATEFRRPDRSWQPRGFWPEIDDGLRRAVFERGVAVRLLVGCWAHSKAAMFPFLRSLAAIADNATRFSAEVRLFVVPSTAAQSRIPYARVSHQKYMVTEKAAYIGTSNWSADYFQRTAGSALVLQHTGSPPSTEPTLRAQLQSSFERDWGSPYSIDIGDTERWQQHCGPPRGGTR
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(307218..307432,308541..308640,309593..309758,310657..310814,311285..311485,312179..312306,312946..313066,313820..313991,315119..315243,315327..315380,315919..315945))
location: region:307218-315945:-1
so has part: feature:315919-315945:-1:exon
so has part: feature:315327-315380:-1:exon
so has part: feature:315119-315243:-1:exon
so has part: feature:313820-313991:-1:exon
so has part: feature:312946-313066:-1:exon
so has part: feature:312179-312306:-1:exon
so has part: feature:311285-311485:-1:exon
so has part: feature:310657-310814:-1:exon
so has part: feature:309593-309758:-1:exon
so has part: feature:308541-308640:-1:exon
so has part: feature:307218-307432:-1:exon

XP_025000266.2
type: Protein
SIO_000068: ncbiprotein

position:307218:-1
position: 307218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315945:-1
position: 315945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315919-315945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315327-315380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315119-315243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313820-313991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312946-313066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312179-312306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311285-311485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310657-310814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309593-309758:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308541-308640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307218-307432:-1:exon

PLD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exonuclease PLD3 isoform X1
translation: MKPYVVYEKLPPMDPPAPKDSPRRLLLPAVLCALLGSLSLLLLLPCFGLGGAAVLQGQSGDSGCGDTCRAVLVESTPQGVPPGPHPSTFSSWLRIIGTARRSLDIASFYWTLSNRDTATHEPSAAPGERILAELLQLPRRGVAVRVAVSAPTHTTPMGDLLALQSSGAAVRAVDVGRLAGGVLHTKLWVADGAHVYLGSANMDWRSLTQVKELGVAIYNCSCVAQDVAKVFEAYWALGAPNASIPTPWPSNFSTPFNMETPLRLRLNGTPTALYFSSSPPSFCAAGRTPDLNAVLGVIDAAQQFISVAVMSYLPATEFRRPDRSWQPRGFWPEIDDGLRRAVFERGVAVRLLVGCWAHSKAAMFPFLRSLAAIADNATRFSAEVRLFVVPSTAAQSRIPYARVSHQKYMVTEKAAYIGTSNWSADYFQRTAGSALVLQHTGSPPSTEPTLRAQLQSSFERDWGSPYSIDIGDTERWQQHCGPPRGGTR
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(307218..307432,308541..308640,309593..309758,310657..310814,311285..311485,312179..312306,312946..313066,313820..313991,315119..315243,315327..315380,315919..315945))
location: region:307218-315945:-1
so has part: feature:315919-315945:-1:exon
so has part: feature:315327-315380:-1:exon
so has part: feature:315119-315243:-1:exon
so has part: feature:313820-313991:-1:exon
so has part: feature:312946-313066:-1:exon
so has part: feature:312179-312306:-1:exon
so has part: feature:311285-311485:-1:exon
so has part: feature:310657-310814:-1:exon
so has part: feature:309593-309758:-1:exon
so has part: feature:308541-308640:-1:exon
so has part: feature:307218-307432:-1:exon

XP_040511026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315919-315945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315327-315380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315119-315243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313820-313991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312946-313066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312179-312306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311285-311485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310657-310814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309593-309758:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308541-308640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307218-307432:-1:exon

LOC101748353
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101748353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 317043..323986
location: region:317043-323986:1
so has part: feature:317043-323986:1:exon
subclass of: SO_0000010

101748353
type: Gene
SIO_000068: ncbigene

position:317043:1
position: 317043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323986:1
position: 323986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317043-323986:1:exon

LOC101748353
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101748353
product: uncharacterized LOC101748353, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273924.4
SIO_010081: LOC101748353
subclass of: SO_0000673
so part of: LOC101748353
location: join(317043..317135,317755..317794,317897..317984,318707..318821,319601..319676,320242..320313,320426..320515,321371..321426,321997..323986)
location: region:317043-323986:1
so has part: feature:317043-317135:1:exon
so has part: feature:317755-317794:1:exon
so has part: feature:317897-317984:1:exon
so has part: feature:318707-318821:1:exon
so has part: feature:319601-319676:1:exon
so has part: feature:320242-320313:1:exon
so has part: feature:320426-320515:1:exon
so has part: feature:321371-321426:1:exon
so has part: feature:321997-323986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317043-317135:1:exon

position:317135:1
position: 317135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:317755-317794:1:exon

position:317755:1
position: 317755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317794:1
position: 317794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317897-317984:1:exon

position:317897:1
position: 317897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317984:1
position: 317984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:318707-318821:1:exon

position:318707:1
position: 318707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318821:1
position: 318821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:319601-319676:1:exon

position:319601:1
position: 319601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319676:1
position: 319676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:320242-320313:1:exon

position:320242:1
position: 320242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320313:1
position: 320313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:320426-320515:1:exon

position:320426:1
position: 320426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320515:1
position: 320515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:321371-321426:1:exon

position:321371:1
position: 321371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321426:1
position: 321426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321997-323986:1:exon

position:321997:1
position: 321997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101748353
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101748353
product: uncharacterized LOC101748353, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273925.4
SIO_010081: LOC101748353
subclass of: SO_0000673
so part of: LOC101748353
location: join(317043..317135,317755..317794,317897..317984,318707..318821,319601..319676,320242..320313,320426..320515,321371..321426,322018..323986)
location: region:317043-323986:1
so has part: feature:317043-317135:1:exon
so has part: feature:317755-317794:1:exon
so has part: feature:317897-317984:1:exon
so has part: feature:318707-318821:1:exon
so has part: feature:319601-319676:1:exon
so has part: feature:320242-320313:1:exon
so has part: feature:320426-320515:1:exon
so has part: feature:321371-321426:1:exon
so has part: feature:322018-323986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317043-317135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317755-317794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317897-317984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318707-318821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319601-319676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320242-320313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320426-320515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321371-321426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:322018-323986:1:exon

position:322018:1
position: 322018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101748353
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101748353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X1
translation: MTSRPATCTQHFRLGPGPEGARRRDGAGEALSDGRAATSVTMATSEWIQFFRDAGIPPGPAVSYAVTFVDNRIHKHMLLDLTKELMHELGITLVGDVIAILKHAKVAYRQEMCRAATEALTPPSAPPELRRCANSAAGRMIANSLSRDPTSISITVPNHSSPPVPPKLRRVAADAAVLNPRIRHSPAAPALQRTSVFDRLGAETELSKDPPFPPQPAVGVFGRLGSAPPTSPPPSPEEDNGRPLPYAGVLKKPPPPPRDPPPAVRPPHSPHPLRGSAAPPRPPGLPRQQQPKGETPPGGGGAAASGLGGSQSAHGRRRGGQRVPQAGEEGAVTSSLGAVTSSFSAATSSLGGGAPSFGAVMSSLGALMASPGVT
SIO_010081: LOC101748353
subclass of: SO_0000673
so part of: LOC101748353
location: join(317049..317135,317755..317794,317897..317984,318707..318821,319601..319676,320242..320313,320426..320515,321371..321426,321997..322497)
location: region:317049-322497:1
so has part: feature:317049-317135:1:exon
so has part: feature:317755-317794:1:exon
so has part: feature:317897-317984:1:exon
so has part: feature:318707-318821:1:exon
so has part: feature:319601-319676:1:exon
so has part: feature:320242-320313:1:exon
so has part: feature:320426-320515:1:exon
so has part: feature:321371-321426:1:exon
so has part: feature:321997-322497:1:exon

XP_015129410.4
type: Protein
SIO_000068: ncbiprotein

position:317049:1
position: 317049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322497:1
position: 322497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317049-317135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317755-317794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317897-317984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318707-318821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319601-319676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320242-320313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320426-320515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321371-321426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321997-322497:1:exon

LOC101748353
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101748353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47 homolog isoform X2
translation: MTSRPATCTQHFRLGPGPEGARRRDGAGEALSDGRAATSVTMATSEWIQFFRDAGIPPGPAVSYAVTFVDNRIHKHMLLDLTKELMHELGITLVGDVIAILKHAKVAYRQEMCRAATEALTPPSAPPELRRCANSAAGRMIANSLSRDPTSISITVPNHSSPPVPPKLRRVAADAAVLNPRIRHSPAAPALQRTSVFDRLGAETELSKPAVGVFGRLGSAPPTSPPPSPEEDNGRPLPYAGVLKKPPPPPRDPPPAVRPPHSPHPLRGSAAPPRPPGLPRQQQPKGETPPGGGGAAASGLGGSQSAHGRRRGGQRVPQAGEEGAVTSSLGAVTSSFSAATSSLGGGAPSFGAVMSSLGALMASPGVT
SIO_010081: LOC101748353
subclass of: SO_0000673
so part of: LOC101748353
location: join(317049..317135,317755..317794,317897..317984,318707..318821,319601..319676,320242..320313,320426..320515,321371..321426,322018..322497)
location: region:317049-322497:1
so has part: feature:317049-317135:1:exon
so has part: feature:317755-317794:1:exon
so has part: feature:317897-317984:1:exon
so has part: feature:318707-318821:1:exon
so has part: feature:319601-319676:1:exon
so has part: feature:320242-320313:1:exon
so has part: feature:320426-320515:1:exon
so has part: feature:321371-321426:1:exon
so has part: feature:322018-322497:1:exon

XP_015129411.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317049-317135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317755-317794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317897-317984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318707-318821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319601-319676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320242-320313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320426-320515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321371-321426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:322018-322497:1:exon

LOC101750560
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101750560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 324476..339474
location: region:324476-339474:1
so has part: feature:324476-339474:1:exon
subclass of: SO_0000010

101750560
type: Gene
SIO_000068: ncbigene

position:324476:1
position: 324476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339474:1
position: 339474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324476-339474:1:exon

LOC101750560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101750560
product: uncharacterized LOC101750560
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025144503.3
SIO_010081: LOC101750560
subclass of: SO_0000673
so part of: LOC101750560
location: join(324476..324671,326065..326152,328605..328733,330474..330585,330707..330863,331911..332042,333538..333603,334540..334608,334734..334856,335729..335857,336244..336458,337019..337106,338519..338621,338741..339474)
location: region:324476-339474:1
so has part: feature:324476-324671:1:exon
so has part: feature:326065-326152:1:exon
so has part: feature:328605-328733:1:exon
so has part: feature:330474-330585:1:exon
so has part: feature:330707-330863:1:exon
so has part: feature:331911-332042:1:exon
so has part: feature:333538-333603:1:exon
so has part: feature:334540-334608:1:exon
so has part: feature:334734-334856:1:exon
so has part: feature:335729-335857:1:exon
so has part: feature:336244-336458:1:exon
so has part: feature:337019-337106:1:exon
so has part: feature:338519-338621:1:exon
so has part: feature:338741-339474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324476-324671:1:exon

position:324671:1
position: 324671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326065-326152:1:exon

position:326065:1
position: 326065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326152:1
position: 326152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328605-328733:1:exon

position:328605:1
position: 328605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328733:1
position: 328733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:330474-330585:1:exon

position:330474:1
position: 330474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330585:1
position: 330585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330707-330863:1:exon

position:330707:1
position: 330707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330863:1
position: 330863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:331911-332042:1:exon

position:331911:1
position: 331911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332042:1
position: 332042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:333538-333603:1:exon

position:333538:1
position: 333538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333603:1
position: 333603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:334540-334608:1:exon

position:334540:1
position: 334540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334608:1
position: 334608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:334734-334856:1:exon

position:334734:1
position: 334734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334856:1
position: 334856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:335729-335857:1:exon

position:335729:1
position: 335729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335857:1
position: 335857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:336244-336458:1:exon

position:336244:1
position: 336244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336458:1
position: 336458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:337019-337106:1:exon

position:337019:1
position: 337019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337106:1
position: 337106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:338519-338621:1:exon

position:338519:1
position: 338519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338621:1
position: 338621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:338741-339474:1:exon

position:338741:1
position: 338741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101750560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101750560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MSEVAVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPDSPDSASPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKEQQQPGGDGGDCKCGTPGDNSGAEEMEVAVSKSRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTSDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKALLAGLLKKDPKQRLGGGPTDAQEVMEHRFFAAINWQDVVHRKLVPPFRPQVTSEIDTRYFDDEFTAQSITITPPDRYDDVDALDGDQRTHFPQFSYSASIRE
SIO_010081: LOC101750560
subclass of: SO_0000673
so part of: LOC101750560
location: join(326107..326152,328605..328733,330474..330585,330707..330863,331911..332042,333538..333603,334540..334608,334734..334856,335729..335857,336244..336458,337019..337106,338519..338621,338741..338820)
location: region:326107-338820:1
so has part: feature:326107-326152:1:exon
so has part: feature:328605-328733:1:exon
so has part: feature:330474-330585:1:exon
so has part: feature:330707-330863:1:exon
so has part: feature:331911-332042:1:exon
so has part: feature:333538-333603:1:exon
so has part: feature:334540-334608:1:exon
so has part: feature:334734-334856:1:exon
so has part: feature:335729-335857:1:exon
so has part: feature:336244-336458:1:exon
so has part: feature:337019-337106:1:exon
so has part: feature:338519-338621:1:exon
so has part: feature:338741-338820:1:exon

XP_025000271.1
type: Protein
SIO_000068: ncbiprotein

position:326107:1
position: 326107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338820:1
position: 338820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326107-326152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328605-328733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330474-330585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330707-330863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331911-332042:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333538-333603:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:334540-334608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334734-334856:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:335729-335857:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336244-336458:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:337019-337106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338519-338621:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338741-338820:1:exon

LOC107050662
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107050662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340324..349439
location: region:340324-349439:1
so has part: feature:340324-349439:1:exon
subclass of: SO_0000010

107050662
type: Gene
SIO_000068: ncbigene

position:340324:1
position: 340324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349439:1
position: 349439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340324-349439:1:exon

LOC107050662
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107050662
product: 26S proteasome non-ATPase regulatory subunit 8-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040655093.2
SIO_010081: LOC107050662
subclass of: SO_0000673
so part of: LOC107050662
location: join(340324..340496,341423..341495,342027..342129,343046..343211,345574..345674,348153..348264,349009..349439)
location: region:340324-349439:1
so has part: feature:340324-340496:1:exon
so has part: feature:341423-341495:1:exon
so has part: feature:342027-342129:1:exon
so has part: feature:343046-343211:1:exon
so has part: feature:345574-345674:1:exon
so has part: feature:348153-348264:1:exon
so has part: feature:349009-349439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340324-340496:1:exon