Gallus gallus isolate bGalGal1 chromosome 34, bGalGal1.mat.broiler.GRCg7b, whole genome shotgun sequence.
type: Entry
definition: Gallus gallus isolate bGalGal1 chromosome 34, bGalGal1.mat.broiler.GRCg7b, whole genome shotgun sequence.
sequence version: NC_052565.1
sequence date: 2022-03-01
sequence: sequence
division: CON
label: NC_052565.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA698609
dblink: SAMN15960293
keyword: WGS
keyword: RefSeq
source: Gallus gallus (chicken)
organism: Gallus gallus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM028515.1.\nAssembly name: bGalGal1.mat.broiler.GRCg7b\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/01/19. The original whole-genome shotgun project has the\naccession JAENSK000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 22-JUL-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n SMRTLink7.0.1; Freebayes v. 1.3.1; gEVAL\n manual curation v. 2020-07-22; VGP trio\n assembly pipeline v. 1.6\nAssembly Name :: bGalGal1.mat.broiler.GRCg7b\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 102.01x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Gallus gallus Annotation Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3469343
topology: linear
so has quality: SO_0000987
location: 1..3469343
location: region:1-3469343:1
RO_0002162: 9031

NC_052565
type: RefSeq
SIO_000068: refseq

PRJNA698609
type: BioProject
SIO_000068: bioproject

SAMN15960293
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3469343:1
position: 3469343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3469343:1:source
so part of: sequence
organism: Gallus gallus
mol type: genomic DNA
isolate: bGalGal1
chromosome: 34
sex: female
tissue type: blood
country: USA: Fayetteville
lat lon: 36.0822 N 94.1719 W
collection date: 20-May-2019
collected by: Nick Anthony

9031
type: Taxonomy
SIO_000068: taxonomy

WNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: WNT-1
gene: WNT1
gene synonym: WNT-1
note: Wnt family member 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(17120..22528)
location: region:17120-22528:-1
so has part: feature:17120-22528:-1:exon
subclass of: SO_0000010

396160
type: Gene
SIO_000068: ncbigene

position:17120:-1
position: 17120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22528:-1
position: 22528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17120-22528:-1:exon

WNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: WNT-1
gene: WNT1
gene synonym: WNT-1
product: Wnt family member 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001396681.1
SIO_010081: WNT1
subclass of: SO_0000673
so part of: WNT1
location: complement(join(17120..17644,17996..18261,19022..19275,21620..22528))
location: region:17120-22528:-1
so has part: feature:21620-22528:-1:exon
so has part: feature:19022-19275:-1:exon
so has part: feature:17996-18261:-1:exon
so has part: feature:17120-17644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21620-22528:-1:exon

position:21620:-1
position: 21620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19022-19275:-1:exon

position:19022:-1
position: 19022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19275:-1
position: 19275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17996-18261:-1:exon

position:17996:-1
position: 17996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18261:-1
position: 18261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17120-17644:-1:exon

position:17644:-1
position: 17644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: WNT-1
gene: WNT1
gene synonym: WNT-1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: protein Wnt-1 precursor
translation: MRGPALLLALRALCALSALRGTARAVNNSGRWWGIINVASSTNLLTDSGSVQLVLEPGLQLLSRKQRRLIRQNPGILHSVSAGLQSAVRECQWQFRNRRWNCPTSQGPNIFGKIVNRGCRETAFIFAITSAGVTHSVARSCSEGSIESCTCDYRRRGPGGPDWHWGGCSDNIDFGRLFGREFVDSSEKGRDLRFLMNLHNNEAGRMTVFSEMRQECKCHGMSGSCTVRTCWMRLPTFRAVGDVLKDRFDGASRVIYGNKGSNRASRVELHHLEPENPAHKPPSPHDLVYFEKSPNFCTYSGKMGTAGTAGRACNSSSPGLDGCELLCCGRGFRTRTQRVTERCNCTFHWCCHVSCLNCTNTQVLHECL
SIO_010081: WNT1
subclass of: SO_0000673
so part of: WNT1
location: complement(join(17156..17644,17996..18261,19022..19275,21620..21717))
location: region:17156-21717:-1
so has part: feature:21620-21717:-1:exon
so has part: feature:19022-19275:-1:exon
so has part: feature:17996-18261:-1:exon
so has part: feature:17156-17644:-1:exon

NP_001383610.1
type: Protein
SIO_000068: ncbiprotein

position:17156:-1
position: 17156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21717:-1
position: 21717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21620-21717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19022-19275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17996-18261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17156-17644:-1:exon

WNT1
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9031
alternative label: WNT-1
gene: WNT1
gene synonym: WNT-1
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: WNT1
subclass of: SO_0000673
so part of: WNT1
location: complement(21643..21717)
location: region:21643-21717:-1
so has part: feature:21643-21717:-1:exon

position:21643:-1
position: 21643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21643-21717:-1:exon

ARF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ARF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 23703..28110
location: region:23703-28110:1
so has part: feature:23703-28110:1:exon
subclass of: SO_0000010

107049507
type: Gene
SIO_000068: ncbigene

position:23703:1
position: 23703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28110:1
position: 28110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23703-28110:1:exon

ARF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ARF3
product: ADP ribosylation factor 3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273181.4
SIO_010081: ARF3
subclass of: SO_0000673
so part of: ARF3
location: join(23703..23762,24415..24588,25524..25634,26231..26355,26960..28110)
location: region:23703-28110:1
so has part: feature:23703-23762:1:exon
so has part: feature:24415-24588:1:exon
so has part: feature:25524-25634:1:exon
so has part: feature:26231-26355:1:exon
so has part: feature:26960-28110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23703-23762:1:exon

position:23762:1
position: 23762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24415-24588:1:exon

position:24415:1
position: 24415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24588:1
position: 24588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25524-25634:1:exon

position:25524:1
position: 25524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25634:1
position: 25634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26231-26355:1:exon

position:26231:1
position: 26231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26355:1
position: 26355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:26960-28110:1:exon

position:26960:1
position: 26960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ARF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor 3
translation: MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK
SIO_010081: ARF3
subclass of: SO_0000673
so part of: ARF3
location: join(24441..24588,25524..25634,26231..26355,26960..27121)
location: region:24441-27121:1
so has part: feature:24441-24588:1:exon
so has part: feature:25524-25634:1:exon
so has part: feature:26231-26355:1:exon
so has part: feature:26960-27121:1:exon

XP_015128667.2
type: Protein
SIO_000068: ncbiprotein

position:24441:1
position: 24441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27121:1
position: 27121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24441-24588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25524-25634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26231-26355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26960-27121:1:exon

FKBP11
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: FKBP11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 29706..32152
location: region:29706-32152:1
so has part: feature:29706-32152:1:exon
subclass of: SO_0000010

107049506
type: Gene
SIO_000068: ncbigene

position:29706:1
position: 29706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32152:1
position: 32152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29706-32152:1:exon

FKBP11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: FKBP11
product: FK506 binding protein 11
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145686.3
SIO_010081: FKBP11
subclass of: SO_0000673
so part of: FKBP11
location: join(29706..29859,30417..30482,30960..31047,31127..31160,31768..31838,31915..32152)
location: region:29706-32152:1
so has part: feature:29706-29859:1:exon
so has part: feature:30417-30482:1:exon
so has part: feature:30960-31047:1:exon
so has part: feature:31127-31160:1:exon
so has part: feature:31768-31838:1:exon
so has part: feature:31915-32152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29706-29859:1:exon

position:29859:1
position: 29859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30417-30482:1:exon

position:30417:1
position: 30417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30482:1
position: 30482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30960-31047:1:exon

position:30960:1
position: 30960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31047:1
position: 31047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31127-31160:1:exon

position:31127:1
position: 31127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31160:1
position: 31160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:31768-31838:1:exon

position:31768:1
position: 31768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31838:1
position: 31838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31915-32152:1:exon

position:31915:1
position: 31915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FKBP11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: FKBP11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP11
translation: MPSPVALLLLFALLPPSPPPLHAAATGSESESGNRGVRVETIVAAPEGCVERSALGDTVHIHYTGSLEDGRVIDTSLSRDPLQVELGKRQVIPGLEQSLLDMCVGEKRRATIPPHLAYGRRGSPPTIPGDAVLRFEVQLVALSRAGGWRRALDRLLPLLCLALLPALLGLIGFHLYRKAGGPKASKKRQKEEKRNKAKKK
SIO_010081: FKBP11
subclass of: SO_0000673
so part of: FKBP11
location: join(29734..29859,30417..30482,30960..31047,31127..31160,31768..31838,31915..32132)
location: region:29734-32132:1
so has part: feature:29734-29859:1:exon
so has part: feature:30417-30482:1:exon
so has part: feature:30960-31047:1:exon
so has part: feature:31127-31160:1:exon
so has part: feature:31768-31838:1:exon
so has part: feature:31915-32132:1:exon

XP_025001454.2
type: Protein
SIO_000068: ncbiprotein

position:29734:1
position: 29734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32132:1
position: 32132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29734-29859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30417-30482:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30960-31047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31127-31160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31768-31838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31915-32132:1:exon

CCDC65
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: CCDC65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(32208..35394)
location: region:32208-35394:-1
so has part: feature:32208-35394:-1:exon
subclass of: SO_0000010

100857346
type: Gene
SIO_000068: ncbigene

position:32208:-1
position: 32208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35394:-1
position: 35394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32208-35394:-1:exon

CCDC65
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CCDC65
product: coiled-coil domain containing 65, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040654802.2
SIO_010081: CCDC65
subclass of: SO_0000673
so part of: CCDC65
location: complement(join(32208..32688,32842..32994,33097..33315,33395..33592,33714..33852,34510..34679,34750..34917,35343..35394))
location: region:32208-35394:-1
so has part: feature:35343-35394:-1:exon
so has part: feature:34750-34917:-1:exon
so has part: feature:34510-34679:-1:exon
so has part: feature:33714-33852:-1:exon
so has part: feature:33395-33592:-1:exon
so has part: feature:33097-33315:-1:exon
so has part: feature:32842-32994:-1:exon
so has part: feature:32208-32688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35343-35394:-1:exon

position:35343:-1
position: 35343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34750-34917:-1:exon

position:34750:-1
position: 34750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34917:-1
position: 34917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34510-34679:-1:exon

position:34510:-1
position: 34510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34679:-1
position: 34679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33714-33852:-1:exon

position:33714:-1
position: 33714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33852:-1
position: 33852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33395-33592:-1:exon

position:33395:-1
position: 33395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33592:-1
position: 33592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33097-33315:-1:exon

position:33097:-1
position: 33097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33315:-1
position: 33315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:32842-32994:-1:exon

position:32842:-1
position: 32842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32994:-1
position: 32994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:32208-32688:-1:exon

position:32688:-1
position: 32688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC65
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CCDC65
product: coiled-coil domain containing 65, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_046904965.1
SIO_010081: CCDC65
subclass of: SO_0000673
so part of: CCDC65
location: complement(join(32208..32688,32842..32994,33097..33315,33395..33592,33714..33852,34510..34679,34750..34917,34998..35134,35343..35394))
location: region:32208-35394:-1
so has part: feature:35343-35394:-1:exon
so has part: feature:34998-35134:-1:exon
so has part: feature:34750-34917:-1:exon
so has part: feature:34510-34679:-1:exon
so has part: feature:33714-33852:-1:exon
so has part: feature:33395-33592:-1:exon
so has part: feature:33097-33315:-1:exon
so has part: feature:32842-32994:-1:exon
so has part: feature:32208-32688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35343-35394:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34998-35134:-1:exon

position:34998:-1
position: 34998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35134:-1
position: 35134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34750-34917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34510-34679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33714-33852:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33395-33592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33097-33315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32842-32994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32208-32688:-1:exon

CCDC65
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CCDC65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 2 isoform X1
translation: MPVKRQQRAAAPTSAEDGLLLLQGQALAEEEAAKRKREMLSRFLKDKLSQEQQSTALNLHKLHSQWRAVLREAKAQELQQDVAILSQTFARVMDSKDSVIESLVTDLEEAEVQHSRALSGHLQNVDRLLQLQRCRLRCMEEGYRAQLEELQEEFETERRSIVERHQRELRYLQDVAVAVEQNHAREEHEATLNFQSTRDEIKNKSLQEKQYTRLQLSGKLEGLWEQFHCAMQSYAEATERRKLSFEALKAKDEKSSREVEVQEKKLQKLQDAVLAAKARLAAHLRAGEEQNGRVREQKEAALGQLQQLKSEMSRARAKAHRSLAELTAQSGAALKALGKIVGKAERVLRLAELCRRMESEEEKVLPFYPSSLAEGERDDAERVLREAPTEPLARAVLDYVGLEGFWRRFNKAKLEEVAAGQQRAALTHSNRRLRALLRRYLDGLAANADALSEANALPDVSNGSRVPKACLQRSRDAPQPHDPPARRGAVGHAVGLRAEPQSREGP
SIO_010081: CCDC65
subclass of: SO_0000673
so part of: CCDC65
location: complement(join(32350..32688,32842..32994,33097..33315,33395..33592,33714..33852,34510..34679,34750..34917,34998..35132))
location: region:32350-35132:-1
so has part: feature:34998-35132:-1:exon
so has part: feature:34750-34917:-1:exon
so has part: feature:34510-34679:-1:exon
so has part: feature:33714-33852:-1:exon
so has part: feature:33395-33592:-1:exon
so has part: feature:33097-33315:-1:exon
so has part: feature:32842-32994:-1:exon
so has part: feature:32350-32688:-1:exon

XP_046760921.1
type: Protein
SIO_000068: ncbiprotein

position:32350:-1
position: 32350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35132:-1
position: 35132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34998-35132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34750-34917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34510-34679:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33714-33852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33395-33592:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33097-33315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32842-32994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32350-32688:-1:exon

CCDC65
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CCDC65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 2 isoform X2
translation: MDSKDSVIESLVTDLEEAEVQHSRALSGHLQNVDRLLQLQRCRLRCMEEGYRAQLEELQEEFETERRSIVERHQRELRYLQDVAVAVEQNHAREEHEATLNFQSTRDEIKNKSLQEKQYTRLQLSGKLEGLWEQFHCAMQSYAEATERRKLSFEALKAKDEKSSREVEVQEKKLQKLQDAVLAAKARLAAHLRAGEEQNGRVREQKEAALGQLQQLKSEMSRARAKAHRSLAELTAQSGAALKALGKIVGKAERVLRLAELCRRMESEEEKVLPFYPSSLAEGERDDAERVLREAPTEPLARAVLDYVGLEGFWRRFNKAKLEEVAAGQQRAALTHSNRRLRALLRRYLDGLAANADALSEANALPDVSNGSRVPKACLQRSRDAPQPHDPPARRGAVGHAVGLRAEPQSREGP
SIO_010081: CCDC65
subclass of: SO_0000673
so part of: CCDC65
location: complement(join(32350..32688,32842..32994,33097..33315,33395..33592,33714..33852,34510..34679,34750..34776))
location: region:32350-34776:-1
so has part: feature:34750-34776:-1:exon
so has part: feature:34510-34679:-1:exon
so has part: feature:33714-33852:-1:exon
so has part: feature:33395-33592:-1:exon
so has part: feature:33097-33315:-1:exon
so has part: feature:32842-32994:-1:exon
so has part: feature:32350-32688:-1:exon

XP_040510736.1
type: Protein
SIO_000068: ncbiprotein

position:34776:-1
position: 34776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34750-34776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34510-34679:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33714-33852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33395-33592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33097-33315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32842-32994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32350-32688:-1:exon

RND1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: RND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 35606..39389
location: region:35606-39389:1
so has part: feature:35606-39389:1:exon
subclass of: SO_0000010

101751843
type: Gene
SIO_000068: ncbigene

position:35606:1
position: 35606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39389:1
position: 39389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35606-39389:1:exon

RND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RND1
product: Rho family GTPase 1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_015273180.4
SIO_010081: RND1
subclass of: SO_0000673
so part of: RND1
location: join(35606..35783,35860..35947,37171..37280,37540..37674,38624..39389)
location: region:35606-39389:1
so has part: feature:35606-35783:1:exon
so has part: feature:35860-35947:1:exon
so has part: feature:37171-37280:1:exon
so has part: feature:37540-37674:1:exon
so has part: feature:38624-39389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35606-35783:1:exon

position:35783:1
position: 35783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35860-35947:1:exon

position:35860:1
position: 35860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35947:1
position: 35947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37171-37280:1:exon

position:37171:1
position: 37171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37280:1
position: 37280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:37540-37674:1:exon

position:37540:1
position: 37540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37674:1
position: 37674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:38624-39389:1:exon

position:38624:1
position: 38624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: RND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein Rho6
translation: MRERRPPAAAPARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLSSEEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDVSRPETLDSASKKWKTEILDYCPNTRLLLIGCKTDLRTDLSTVLELSHQKQAPISYEQGCVAARQLGAESYLECSAFTSEKSVHSIFRTVSSICLSRAPPQPPQSPPRGLSKRLLHLPTRSELISSAFKKEKAKSCSVM
SIO_010081: RND1
subclass of: SO_0000673
so part of: RND1
location: join(35664..35783,35860..35947,37171..37280,37540..37674,38624..38869)
location: region:35664-38869:1
so has part: feature:35664-35783:1:exon
so has part: feature:35860-35947:1:exon
so has part: feature:37171-37280:1:exon
so has part: feature:37540-37674:1:exon
so has part: feature:38624-38869:1:exon

XP_015128666.3
type: Protein
SIO_000068: ncbiprotein

position:35664:1
position: 35664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38869:1
position: 38869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35664-35783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35860-35947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37171-37280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37540-37674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38624-38869:1:exon

DDX23
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: DDX23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 40173..45325
location: region:40173-45325:1
so has part: feature:40173-45325:1:exon
subclass of: SO_0000010

100858001
type: Gene
SIO_000068: ncbigene

position:40173:1
position: 40173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45325:1
position: 45325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40173-45325:1:exon

DDX23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: DDX23
product: DEAD-box helicase 23, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145673.3
SIO_010081: DDX23
subclass of: SO_0000673
so part of: DDX23
location: join(40173..40248,40427..40632,40718..40816,41131..41227,41303..41368,41523..41661,41754..41887,41979..42091,42168..42311,42421..42646,42802..42947,43040..43217,43327..43569,43917..44068,44173..44281,44481..44655,44747..45325)
location: region:40173-45325:1
so has part: feature:40173-40248:1:exon
so has part: feature:40427-40632:1:exon
so has part: feature:40718-40816:1:exon
so has part: feature:41131-41227:1:exon
so has part: feature:41303-41368:1:exon
so has part: feature:41523-41661:1:exon
so has part: feature:41754-41887:1:exon
so has part: feature:41979-42091:1:exon
so has part: feature:42168-42311:1:exon
so has part: feature:42421-42646:1:exon
so has part: feature:42802-42947:1:exon
so has part: feature:43040-43217:1:exon
so has part: feature:43327-43569:1:exon
so has part: feature:43917-44068:1:exon
so has part: feature:44173-44281:1:exon
so has part: feature:44481-44655:1:exon
so has part: feature:44747-45325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40173-40248:1:exon

position:40248:1
position: 40248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40427-40632:1:exon

position:40427:1
position: 40427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40632:1
position: 40632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:40718-40816:1:exon

position:40718:1
position: 40718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40816:1
position: 40816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41131-41227:1:exon

position:41131:1
position: 41131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41227:1
position: 41227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:41303-41368:1:exon

position:41303:1
position: 41303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41368:1
position: 41368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41523-41661:1:exon

position:41523:1
position: 41523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41661:1
position: 41661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:41754-41887:1:exon

position:41754:1
position: 41754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41887:1
position: 41887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:41979-42091:1:exon

position:41979:1
position: 41979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42091:1
position: 42091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:42168-42311:1:exon

position:42168:1
position: 42168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42311:1
position: 42311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:42421-42646:1:exon

position:42421:1
position: 42421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42646:1
position: 42646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:42802-42947:1:exon

position:42802:1
position: 42802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42947:1
position: 42947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:43040-43217:1:exon

position:43040:1
position: 43040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43217:1
position: 43217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:43327-43569:1:exon

position:43327:1
position: 43327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43569:1
position: 43569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:43917-44068:1:exon

position:43917:1
position: 43917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44068:1
position: 44068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:44173-44281:1:exon

position:44173:1
position: 44173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44281:1
position: 44281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:44481-44655:1:exon

position:44481:1
position: 44481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44655:1
position: 44655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:44747-45325:1:exon

position:44747:1
position: 44747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DDX23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: DDX23
product: DEAD-box helicase 23, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145674.3
SIO_010081: DDX23
subclass of: SO_0000673
so part of: DDX23
location: join(40173..40248,40427..40632,40718..40816,41131..41227,41303..41368,41523..41661,41757..41887,41979..42091,42168..42311,42421..42646,42802..42947,43040..43217,43327..43569,43917..44068,44173..44281,44481..44655,44747..45325)
location: region:40173-45325:1
so has part: feature:40173-40248:1:exon
so has part: feature:40427-40632:1:exon
so has part: feature:40718-40816:1:exon
so has part: feature:41131-41227:1:exon
so has part: feature:41303-41368:1:exon
so has part: feature:41523-41661:1:exon
so has part: feature:41757-41887:1:exon
so has part: feature:41979-42091:1:exon
so has part: feature:42168-42311:1:exon
so has part: feature:42421-42646:1:exon
so has part: feature:42802-42947:1:exon
so has part: feature:43040-43217:1:exon
so has part: feature:43327-43569:1:exon
so has part: feature:43917-44068:1:exon
so has part: feature:44173-44281:1:exon
so has part: feature:44481-44655:1:exon
so has part: feature:44747-45325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40173-40248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40427-40632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40718-40816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41131-41227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41303-41368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41523-41661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41757-41887:1:exon

position:41757:1
position: 41757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:41979-42091:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42168-42311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42421-42646:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42802-42947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43040-43217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43327-43569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:43917-44068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:44173-44281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:44481-44655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:44747-45325:1:exon

DDX23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: DDX23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX23 isoform X1
translation: MAGELTDKKDRDASPVKEERKRSRSPDRDRDRDRDRKGSPPKDRKRHRSRDRRRGSRSRSRSRSKSLDRDRRHKERDRDRGKKDREREKDGHRRDKDRKRSSLSPSRGKDSKSRKERDSRKAEEEEENALKKEKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALRRRQQEVEERQRLLEEERKKRKQFQEMGRKMLEDPQERERRERRERMERETNGTEDEEGRQKIREEKDKSKELHAIKERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSTVFYDLKQAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
SIO_010081: DDX23
subclass of: SO_0000673
so part of: DDX23
location: join(40427..40632,40718..40816,41131..41227,41303..41368,41523..41661,41754..41887,41979..42091,42168..42311,42421..42646,42802..42947,43040..43217,43327..43569,43917..44068,44173..44281,44481..44655,44747..44970)
location: region:40427-44970:1
so has part: feature:40427-40632:1:exon
so has part: feature:40718-40816:1:exon
so has part: feature:41131-41227:1:exon
so has part: feature:41303-41368:1:exon
so has part: feature:41523-41661:1:exon
so has part: feature:41754-41887:1:exon
so has part: feature:41979-42091:1:exon
so has part: feature:42168-42311:1:exon
so has part: feature:42421-42646:1:exon
so has part: feature:42802-42947:1:exon
so has part: feature:43040-43217:1:exon
so has part: feature:43327-43569:1:exon
so has part: feature:43917-44068:1:exon
so has part: feature:44173-44281:1:exon
so has part: feature:44481-44655:1:exon
so has part: feature:44747-44970:1:exon

XP_025001441.1
type: Protein
SIO_000068: ncbiprotein

position:44970:1
position: 44970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40427-40632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40718-40816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41131-41227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41303-41368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41523-41661:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41754-41887:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41979-42091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42168-42311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42421-42646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42802-42947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:43040-43217:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43327-43569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43917-44068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44173-44281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:44481-44655:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:44747-44970:1:exon

DDX23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: DDX23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX23 isoform X2
translation: MAGELTDKKDRDASPVKEERKRSRSPDRDRDRDRDRKGSPPKDRKRHRSRDRRRGSRSRSRSRSKSLDRDRRHKERDRDRGKKDREREKDGHRRDKDRKRSSLSPSRGKDSKSRKERDSRKAEEEEENALKKEKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALRRRQQEVEERQRLLEEERKKRKQFQEMGRKMLDPQERERRERRERMERETNGTEDEEGRQKIREEKDKSKELHAIKERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSTVFYDLKQAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
SIO_010081: DDX23
subclass of: SO_0000673
so part of: DDX23
location: join(40427..40632,40718..40816,41131..41227,41303..41368,41523..41661,41757..41887,41979..42091,42168..42311,42421..42646,42802..42947,43040..43217,43327..43569,43917..44068,44173..44281,44481..44655,44747..44970)
location: region:40427-44970:1
so has part: feature:40427-40632:1:exon
so has part: feature:40718-40816:1:exon
so has part: feature:41131-41227:1:exon
so has part: feature:41303-41368:1:exon
so has part: feature:41523-41661:1:exon
so has part: feature:41757-41887:1:exon
so has part: feature:41979-42091:1:exon
so has part: feature:42168-42311:1:exon
so has part: feature:42421-42646:1:exon
so has part: feature:42802-42947:1:exon
so has part: feature:43040-43217:1:exon
so has part: feature:43327-43569:1:exon
so has part: feature:43917-44068:1:exon
so has part: feature:44173-44281:1:exon
so has part: feature:44481-44655:1:exon
so has part: feature:44747-44970:1:exon

XP_025001442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40427-40632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40718-40816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41131-41227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41303-41368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41523-41661:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41757-41887:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41979-42091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42168-42311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42421-42646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42802-42947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:43040-43217:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43327-43569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43917-44068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44173-44281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:44481-44655:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:44747-44970:1:exon

LOC121108124
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121108124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 45671..48438
location: region:45671-48438:1
so has part: feature:45671-48438:1:exon

121108124
type: Gene
SIO_000068: ncbigene

position:45671:1
position: 45671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48438:1
position: 48438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45671-48438:1:exon

LOC121108124
type: Exon
subclass of: SO_0000147
RO_0002162: 9031
gene: LOC121108124
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121108124
subclass of: SO_0000673
so part of: LOC121108124
location: 45671..45764
location: region:45671-45764:1
so has part: feature:45671-45764:1:exon

position:45764:1
position: 45764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45671-45764:1:exon

LOC121108124
type: Exon
subclass of: SO_0000147
RO_0002162: 9031
gene: LOC121108124
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121108124
subclass of: SO_0000673
so part of: LOC121108124
location: 46675..46793
location: region:46675-46793:1
so has part: feature:46675-46793:1:exon

position:46675:1
position: 46675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46793:1
position: 46793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46675-46793:1:exon

LOC121108124
type: Exon
subclass of: SO_0000147
RO_0002162: 9031
gene: LOC121108124
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121108124
subclass of: SO_0000673
so part of: LOC121108124
location: 47067..47201
location: region:47067-47201:1
so has part: feature:47067-47201:1:exon

position:47067:1
position: 47067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47201:1
position: 47201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47067-47201:1:exon

LOC121108124
type: Exon
subclass of: SO_0000147
RO_0002162: 9031
gene: LOC121108124
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121108124
subclass of: SO_0000673
so part of: LOC121108124
location: 48158..48438
location: region:48158-48438:1
so has part: feature:48158-48438:1:exon

position:48158:1
position: 48158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48158-48438:1:exon

LOC121108097
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121108097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 49510..54866
location: region:49510-54866:1
so has part: feature:49510-54866:1:exon
subclass of: SO_0000010

121108097
type: Gene
SIO_000068: ncbigene

position:49510:1
position: 49510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54866:1
position: 54866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49510-54866:1:exon

LOC121108097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121108097
product: probable ATP-dependent RNA helicase DDX23
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_040654931.1
SIO_010081: LOC121108097
subclass of: SO_0000673
so part of: LOC121108097
location: join(49510..49768,49967..50172,50258..50356,50671..50767,50843..50908,51063..51201,51294..51427,51519..51631,51707..51850,51960..52185,52342..52487,52583..52760,52870..53112,53461..53612,53716..53824,54024..54198,54290..54866)
location: region:49510-54866:1
so has part: feature:49510-49768:1:exon
so has part: feature:49967-50172:1:exon
so has part: feature:50258-50356:1:exon
so has part: feature:50671-50767:1:exon
so has part: feature:50843-50908:1:exon
so has part: feature:51063-51201:1:exon
so has part: feature:51294-51427:1:exon
so has part: feature:51519-51631:1:exon
so has part: feature:51707-51850:1:exon
so has part: feature:51960-52185:1:exon
so has part: feature:52342-52487:1:exon
so has part: feature:52583-52760:1:exon
so has part: feature:52870-53112:1:exon
so has part: feature:53461-53612:1:exon
so has part: feature:53716-53824:1:exon
so has part: feature:54024-54198:1:exon
so has part: feature:54290-54866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49510-49768:1:exon

position:49768:1
position: 49768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49967-50172:1:exon

position:49967:1
position: 49967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50172:1
position: 50172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50258-50356:1:exon

position:50258:1
position: 50258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50356:1
position: 50356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50671-50767:1:exon

position:50671:1
position: 50671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50767:1
position: 50767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:50843-50908:1:exon

position:50843:1
position: 50843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50908:1
position: 50908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51063-51201:1:exon

position:51063:1
position: 51063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51201:1
position: 51201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:51294-51427:1:exon

position:51294:1
position: 51294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51427:1
position: 51427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:51519-51631:1:exon

position:51519:1
position: 51519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51631:1
position: 51631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:51707-51850:1:exon

position:51707:1
position: 51707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51850:1
position: 51850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:51960-52185:1:exon

position:51960:1
position: 51960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52185:1
position: 52185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:52342-52487:1:exon

position:52342:1
position: 52342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52487:1
position: 52487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:52583-52760:1:exon

position:52583:1
position: 52583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52760:1
position: 52760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:52870-53112:1:exon

position:52870:1
position: 52870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53112:1
position: 53112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:53461-53612:1:exon

position:53461:1
position: 53461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53612:1
position: 53612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:53716-53824:1:exon

position:53716:1
position: 53716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53824:1
position: 53824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:54024-54198:1:exon

position:54024:1
position: 54024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54198:1
position: 54198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:54290-54866:1:exon

position:54290:1
position: 54290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121108097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121108097
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23
translation: MGSERSAVRAEPRGPLGNVVPEATVELYFRKGPLAAAVPVEVYFRKGLRGPLGVAVPEVAAGAPRFPSVPRGGHGGGAALRPRPGPDGRELTDKKDRDASPVKEERKRSRSPDRDRDRDRDRKGSPPKDRKRHRSRDRRRGSRSRSRSRSKSLDRDRRHKERDRDRGKKDREREKDGHRRDKDRKRSSLSPSRGKDSKSRKERDSRKAEEEEENALKKEKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALRRRQQEVEERQRLLEEERKKRKQFQEMGRKMLEDPQERERRERRERMERETNGTEDEEGRQKIREEKDKSKELHAIKERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSTVFYDLKQAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
SIO_010081: LOC121108097
subclass of: SO_0000673
so part of: LOC121108097
location: join(49510..49768,49967..50172,50258..50356,50671..50767,50843..50908,51063..51201,51294..51427,51519..51631,51707..51850,51960..52185,52342..52487,52583..52760,52870..53112,53461..53612,53716..53824,54024..54198,54290..54514)
location: region:49510-54514:1
so has part: feature:49510-49768:1:exon
so has part: feature:49967-50172:1:exon
so has part: feature:50258-50356:1:exon
so has part: feature:50671-50767:1:exon
so has part: feature:50843-50908:1:exon
so has part: feature:51063-51201:1:exon
so has part: feature:51294-51427:1:exon
so has part: feature:51519-51631:1:exon
so has part: feature:51707-51850:1:exon
so has part: feature:51960-52185:1:exon
so has part: feature:52342-52487:1:exon
so has part: feature:52583-52760:1:exon
so has part: feature:52870-53112:1:exon
so has part: feature:53461-53612:1:exon
so has part: feature:53716-53824:1:exon
so has part: feature:54024-54198:1:exon
so has part: feature:54290-54514:1:exon

XP_040510865.1
type: Protein
SIO_000068: ncbiprotein

position:54514:1
position: 54514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49510-49768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49967-50172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50258-50356:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50671-50767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50843-50908:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51063-51201:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:51294-51427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51519-51631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:51707-51850:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51960-52185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52342-52487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:52583-52760:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:52870-53112:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53461-53612:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53716-53824:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54024-54198:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:54290-54514:1:exon

LOC107050029
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107050029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(55558..65241)
location: region:55558-65241:-1
so has part: feature:55558-65241:-1:exon
subclass of: SO_0000010

107050029
type: Gene
SIO_000068: ncbigene

position:55558:-1
position: 55558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65241:-1
position: 65241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55558-65241:-1:exon

LOC107050029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107050029
product: serine/arginine repetitive matrix protein 1-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145683.3
SIO_010081: LOC107050029
subclass of: SO_0000673
so part of: LOC107050029
location: complement(join(55558..56249,56945..57094,57195..57290,57515..57666,57771..57880,58273..58331,58468..58548,58745..58764,58847..58911,59013..59128,59380..59502,59580..59696,62831..62923,63073..65241))
location: region:55558-65241:-1
so has part: feature:63073-65241:-1:exon
so has part: feature:62831-62923:-1:exon
so has part: feature:59580-59696:-1:exon
so has part: feature:59380-59502:-1:exon
so has part: feature:59013-59128:-1:exon
so has part: feature:58847-58911:-1:exon
so has part: feature:58745-58764:-1:exon
so has part: feature:58468-58548:-1:exon
so has part: feature:58273-58331:-1:exon
so has part: feature:57771-57880:-1:exon
so has part: feature:57515-57666:-1:exon
so has part: feature:57195-57290:-1:exon
so has part: feature:56945-57094:-1:exon
so has part: feature:55558-56249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63073-65241:-1:exon

position:63073:-1
position: 63073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62831-62923:-1:exon

position:62831:-1
position: 62831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62923:-1
position: 62923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59580-59696:-1:exon

position:59580:-1
position: 59580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59696:-1
position: 59696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59380-59502:-1:exon

position:59380:-1
position: 59380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59502:-1
position: 59502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59013-59128:-1:exon

position:59013:-1
position: 59013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59128:-1
position: 59128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:58847-58911:-1:exon

position:58847:-1
position: 58847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58911:-1
position: 58911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:58745-58764:-1:exon

position:58745:-1
position: 58745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58764:-1
position: 58764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:58468-58548:-1:exon

position:58468:-1
position: 58468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58548:-1
position: 58548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:58273-58331:-1:exon

position:58273:-1
position: 58273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58331:-1
position: 58331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:57771-57880:-1:exon

position:57771:-1
position: 57771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57880:-1
position: 57880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:57515-57666:-1:exon

position:57515:-1
position: 57515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57666:-1
position: 57666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:57195-57290:-1:exon

position:57195:-1
position: 57195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57290:-1
position: 57290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:56945-57094:-1:exon

position:56945:-1
position: 56945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57094:-1
position: 57094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:55558-56249:-1:exon

position:56249:-1
position: 56249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107050029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107050029
product: serine/arginine repetitive matrix protein 1-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904967.1
SIO_010081: LOC107050029
subclass of: SO_0000673
so part of: LOC107050029
location: complement(join(55558..56249,56945..57094,57195..57290,57515..57666,57771..57880,58273..58331,58468..58548,58745..58764,58847..58911,59013..59128,59380..59502,59580..59696,62831..62923,63055..65241))
location: region:55558-65241:-1
so has part: feature:63055-65241:-1:exon
so has part: feature:62831-62923:-1:exon
so has part: feature:59580-59696:-1:exon
so has part: feature:59380-59502:-1:exon
so has part: feature:59013-59128:-1:exon
so has part: feature:58847-58911:-1:exon
so has part: feature:58745-58764:-1:exon
so has part: feature:58468-58548:-1:exon
so has part: feature:58273-58331:-1:exon
so has part: feature:57771-57880:-1:exon
so has part: feature:57515-57666:-1:exon
so has part: feature:57195-57290:-1:exon
so has part: feature:56945-57094:-1:exon
so has part: feature:55558-56249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63055-65241:-1:exon

position:63055:-1
position: 63055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62831-62923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59580-59696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59380-59502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59013-59128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58847-58911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58745-58764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58468-58548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:58273-58331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57771-57880:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57515-57666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:57195-57290:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:56945-57094:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:55558-56249:-1:exon

LOC107050029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107050029
product: serine/arginine repetitive matrix protein 1-like, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654805.2
SIO_010081: LOC107050029
subclass of: SO_0000673
so part of: LOC107050029
location: complement(join(55558..56249,56945..57094,57195..57290,57515..57666,57771..57880,58273..58331,58468..58548,58745..58764,58847..58911,59013..59128,59380..59502,61245..61380))
location: region:55558-61380:-1
so has part: feature:61245-61380:-1:exon
so has part: feature:59380-59502:-1:exon
so has part: feature:59013-59128:-1:exon
so has part: feature:58847-58911:-1:exon
so has part: feature:58745-58764:-1:exon
so has part: feature:58468-58548:-1:exon
so has part: feature:58273-58331:-1:exon
so has part: feature:57771-57880:-1:exon
so has part: feature:57515-57666:-1:exon
so has part: feature:57195-57290:-1:exon
so has part: feature:56945-57094:-1:exon
so has part: feature:55558-56249:-1:exon

position:61380:-1
position: 61380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61245-61380:-1:exon

position:61245:-1
position: 61245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59380-59502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59013-59128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58847-58911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58745-58764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58468-58548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58273-58331:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57771-57880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57515-57666:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57195-57290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:56945-57094:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55558-56249:-1:exon

LOC107050029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107050029
product: serine/arginine repetitive matrix protein 1-like, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145684.3
SIO_010081: LOC107050029
subclass of: SO_0000673
so part of: LOC107050029
location: complement(join(55558..56249,56945..57094,57195..57290,57515..57666,57771..57880,58273..58331,58468..58548,58745..58764,58847..58911,59013..59128,59380..59502,59580..59696,61245..61380))
location: region:55558-61380:-1
so has part: feature:61245-61380:-1:exon
so has part: feature:59580-59696:-1:exon
so has part: feature:59380-59502:-1:exon
so has part: feature:59013-59128:-1:exon
so has part: feature:58847-58911:-1:exon
so has part: feature:58745-58764:-1:exon
so has part: feature:58468-58548:-1:exon
so has part: feature:58273-58331:-1:exon
so has part: feature:57771-57880:-1:exon
so has part: feature:57515-57666:-1:exon
so has part: feature:57195-57290:-1:exon
so has part: feature:56945-57094:-1:exon
so has part: feature:55558-56249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61245-61380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59580-59696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59380-59502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59013-59128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58847-58911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58745-58764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58468-58548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58273-58331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57771-57880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57515-57666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57195-57290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56945-57094:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:55558-56249:-1:exon

LOC107050029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107050029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit beta-3 isoform X2
translation: MRPHCAVQRCGARPGPVQTGGGGSPGVTPSTENGEMGAKPRVWGGLRTRTRVGAGEGGGAGAGTLGTPPAAPCDAVRGANGGGGAALPRRITAVRFRGRGGIRRVVPSVPPPPGMSAPTQPSSPGSFQSPRRIPKRKSRFKRSDGSTSSDTTSSVLRRQGSADSYTSRPSLDSDASLEEDRERREGQSRAQQQLERAKHKPVAFAVRTNVSYCGALDEECPLQGAAINFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLEAVRLKQEQRARRAGSAPGIGDSGSRRSPPPSLAKQKQKQTQHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITHITADLSLAKRSILNNVGKQALLERSAARSTIAEVQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVYVKVSSPKVLQRLIKSRGKSQVKHLNVQMMAADKLVQCPPELFDVILDENQLEDACEHLAEYLEVYWRATHHPPHSPHAVPSPSSLPGLQGQQLLEERGEHSPLEHDSLMPSDEASDPSPRAWGGPTQRSSRHLEEEEEYGGPYPDLYQPHRHHNSGLHGPPSAPTAAQERLLERDPDRNWQRSRPWAKDSY
SIO_010081: LOC107050029
subclass of: SO_0000673
so part of: LOC107050029
location: complement(join(55941..56249,56945..57094,57195..57290,57515..57666,57771..57880,58273..58331,58468..58548,58745..58764,58847..58911,59013..59128,59380..59502,59580..59696,62831..62923,63073..63456))
location: region:55941-63456:-1
so has part: feature:63073-63456:-1:exon
so has part: feature:62831-62923:-1:exon
so has part: feature:59580-59696:-1:exon
so has part: feature:59380-59502:-1:exon
so has part: feature:59013-59128:-1:exon
so has part: feature:58847-58911:-1:exon
so has part: feature:58745-58764:-1:exon
so has part: feature:58468-58548:-1:exon
so has part: feature:58273-58331:-1:exon
so has part: feature:57771-57880:-1:exon
so has part: feature:57515-57666:-1:exon
so has part: feature:57195-57290:-1:exon
so has part: feature:56945-57094:-1:exon
so has part: feature:55941-56249:-1:exon

XP_025001451.3
type: Protein
SIO_000068: ncbiprotein

position:55941:-1
position: 55941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63456:-1
position: 63456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63073-63456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62831-62923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59580-59696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59380-59502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59013-59128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58847-58911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58745-58764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58468-58548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:58273-58331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57771-57880:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57515-57666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:57195-57290:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:56945-57094:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:55941-56249:-1:exon

LOC107050029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107050029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit beta-3 isoform X1
translation: MRPHCAVQRCGARPGPVQTGGGGSPGVTPSTENGEMGAKPRVWGGLRTRTRVGAGEGGGAGAGTLGTPPAAPCDAVRGANGGGGAALPRRITAVRFRGRGGIRRVVPSVPPPPGMSAPTQPSSPGSFQVSGVGSSPRRIPKRKSRFKRSDGSTSSDTTSSVLRRQGSADSYTSRPSLDSDASLEEDRERREGQSRAQQQLERAKHKPVAFAVRTNVSYCGALDEECPLQGAAINFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLEAVRLKQEQRARRAGSAPGIGDSGSRRSPPPSLAKQKQKQTQHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITHITADLSLAKRSILNNVGKQALLERSAARSTIAEVQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVYVKVSSPKVLQRLIKSRGKSQVKHLNVQMMAADKLVQCPPELFDVILDENQLEDACEHLAEYLEVYWRATHHPPHSPHAVPSPSSLPGLQGQQLLEERGEHSPLEHDSLMPSDEASDPSPRAWGGPTQRSSRHLEEEEEYGGPYPDLYQPHRHHNSGLHGPPSAPTAAQERLLERDPDRNWQRSRPWAKDSY
SIO_010081: LOC107050029
subclass of: SO_0000673
so part of: LOC107050029
location: complement(join(55941..56249,56945..57094,57195..57290,57515..57666,57771..57880,58273..58331,58468..58548,58745..58764,58847..58911,59013..59128,59380..59502,59580..59696,62831..62923,63055..63456))
location: region:55941-63456:-1
so has part: feature:63055-63456:-1:exon
so has part: feature:62831-62923:-1:exon
so has part: feature:59580-59696:-1:exon
so has part: feature:59380-59502:-1:exon
so has part: feature:59013-59128:-1:exon
so has part: feature:58847-58911:-1:exon
so has part: feature:58745-58764:-1:exon
so has part: feature:58468-58548:-1:exon
so has part: feature:58273-58331:-1:exon
so has part: feature:57771-57880:-1:exon
so has part: feature:57515-57666:-1:exon
so has part: feature:57195-57290:-1:exon
so has part: feature:56945-57094:-1:exon
so has part: feature:55941-56249:-1:exon

XP_046760923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63055-63456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62831-62923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59580-59696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59380-59502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59013-59128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58847-58911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58745-58764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58468-58548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:58273-58331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57771-57880:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57515-57666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:57195-57290:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:56945-57094:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:55941-56249:-1:exon

LOC107050029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107050029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit beta-3 isoform X4
translation: MSFSDSSATFLLHEHKPVAFAVRTNVSYCGALDEECPLQGAAINFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLEAVRLKQEQRARRAGSAPGIGDSGSRRSPPPSLAKQKQKQTQHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITHITADLSLAKRSILNNVGKQALLERSAARSTIAEVQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVYVKVSSPKVLQRLIKSRGKSQVKHLNVQMMAADKLVQCPPELFDVILDENQLEDACEHLAEYLEVYWRATHHPPHSPHAVPSPSSLPGLQGQQLLEERGEHSPLEHDSLMPSDEASDPSPRAWGGPTQRSSRHLEEEEEYGGPYPDLYQPHRHHNSGLHGPPSAPTAAQERLLERDPDRNWQRSRPWAKDSY
SIO_010081: LOC107050029
subclass of: SO_0000673
so part of: LOC107050029
location: complement(join(55941..56249,56945..57094,57195..57290,57515..57666,57771..57880,58273..58331,58468..58548,58745..58764,58847..58911,59013..59128,59380..59502,61245..61286))
location: region:55941-61286:-1
so has part: feature:61245-61286:-1:exon
so has part: feature:59380-59502:-1:exon
so has part: feature:59013-59128:-1:exon
so has part: feature:58847-58911:-1:exon
so has part: feature:58745-58764:-1:exon
so has part: feature:58468-58548:-1:exon
so has part: feature:58273-58331:-1:exon
so has part: feature:57771-57880:-1:exon
so has part: feature:57515-57666:-1:exon
so has part: feature:57195-57290:-1:exon
so has part: feature:56945-57094:-1:exon
so has part: feature:55941-56249:-1:exon

XP_040510739.1
type: Protein
SIO_000068: ncbiprotein

position:61286:-1
position: 61286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61245-61286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59380-59502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59013-59128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58847-58911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58745-58764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58468-58548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58273-58331:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57771-57880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57515-57666:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57195-57290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:56945-57094:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55941-56249:-1:exon

LOC107050029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107050029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit beta-3 isoform X3
translation: MSFSDSSATFLLHEGSADSYTSRPSLDSDASLEEDRERREGQSRAQQQLERAKHKPVAFAVRTNVSYCGALDEECPLQGAAINFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLEAVRLKQEQRARRAGSAPGIGDSGSRRSPPPSLAKQKQKQTQHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITHITADLSLAKRSILNNVGKQALLERSAARSTIAEVQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVYVKVSSPKVLQRLIKSRGKSQVKHLNVQMMAADKLVQCPPELFDVILDENQLEDACEHLAEYLEVYWRATHHPPHSPHAVPSPSSLPGLQGQQLLEERGEHSPLEHDSLMPSDEASDPSPRAWGGPTQRSSRHLEEEEEYGGPYPDLYQPHRHHNSGLHGPPSAPTAAQERLLERDPDRNWQRSRPWAKDSY
SIO_010081: LOC107050029
subclass of: SO_0000673
so part of: LOC107050029
location: complement(join(55941..56249,56945..57094,57195..57290,57515..57666,57771..57880,58273..58331,58468..58548,58745..58764,58847..58911,59013..59128,59380..59502,59580..59696,61245..61286))
location: region:55941-61286:-1
so has part: feature:61245-61286:-1:exon
so has part: feature:59580-59696:-1:exon
so has part: feature:59380-59502:-1:exon
so has part: feature:59013-59128:-1:exon
so has part: feature:58847-58911:-1:exon
so has part: feature:58745-58764:-1:exon
so has part: feature:58468-58548:-1:exon
so has part: feature:58273-58331:-1:exon
so has part: feature:57771-57880:-1:exon
so has part: feature:57515-57666:-1:exon
so has part: feature:57195-57290:-1:exon
so has part: feature:56945-57094:-1:exon
so has part: feature:55941-56249:-1:exon

XP_025001452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61245-61286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59580-59696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59380-59502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59013-59128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58847-58911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58745-58764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58468-58548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58273-58331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57771-57880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:57515-57666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57195-57290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56945-57094:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:55941-56249:-1:exon

LOC107050028
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107050028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64678..82901
location: region:64678-82901:1
so has part: feature:64678-82901:1:exon
subclass of: SO_0000010

107050028
type: Gene
SIO_000068: ncbigene

position:64678:1
position: 64678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82901:1
position: 82901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64678-82901:1:exon

LOC107050028
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107050028
product: adenylate cyclase type 6-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040654803.2
SIO_010081: LOC107050028
subclass of: SO_0000673
so part of: LOC107050028
location: join(64678..64922,66547..67252,69317..69466,69770..69891,69975..70086,70566..70693,71384..71542,71619..71760,73123..73251,74006..74031,74126..74273,75023..75120,75775..75862,75948..76064,76625..76783,77435..77610,78782..78811,79061..79190,79919..80182,80839..81043,81896..82020,82111..82901)
location: region:64678-82901:1
so has part: feature:64678-64922:1:exon
so has part: feature:66547-67252:1:exon
so has part: feature:69317-69466:1:exon
so has part: feature:69770-69891:1:exon
so has part: feature:69975-70086:1:exon
so has part: feature:70566-70693:1:exon
so has part: feature:71384-71542:1:exon
so has part: feature:71619-71760:1:exon
so has part: feature:73123-73251:1:exon
so has part: feature:74006-74031:1:exon
so has part: feature:74126-74273:1:exon
so has part: feature:75023-75120:1:exon
so has part: feature:75775-75862:1:exon
so has part: feature:75948-76064:1:exon
so has part: feature:76625-76783:1:exon
so has part: feature:77435-77610:1:exon
so has part: feature:78782-78811:1:exon
so has part: feature:79061-79190:1:exon
so has part: feature:79919-80182:1:exon
so has part: feature:80839-81043:1:exon
so has part: feature:81896-82020:1:exon
so has part: feature:82111-82901:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64678-64922:1:exon

position:64922:1
position: 64922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66547-67252:1:exon

position:66547:1
position: 66547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67252:1
position: 67252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69317-69466:1:exon

position:69317:1
position: 69317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69466:1
position: 69466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69770-69891:1:exon

position:69770:1
position: 69770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69891:1
position: 69891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69975-70086:1:exon

position:69975:1
position: 69975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70086:1
position: 70086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70566-70693:1:exon

position:70566:1
position: 70566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70693:1
position: 70693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:71384-71542:1:exon

position:71384:1
position: 71384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71542:1
position: 71542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:71619-71760:1:exon

position:71619:1
position: 71619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71760:1
position: 71760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:73123-73251:1:exon

position:73123:1
position: 73123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73251:1
position: 73251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:74006-74031:1:exon

position:74006:1
position: 74006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74031:1
position: 74031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:74126-74273:1:exon

position:74126:1
position: 74126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74273:1
position: 74273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:75023-75120:1:exon

position:75023:1
position: 75023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75120:1
position: 75120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:75775-75862:1:exon

position:75775:1
position: 75775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75862:1
position: 75862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:75948-76064:1:exon

position:75948:1
position: 75948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76064:1
position: 76064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:76625-76783:1:exon

position:76625:1
position: 76625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76783:1
position: 76783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:77435-77610:1:exon

position:77435:1
position: 77435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77610:1
position: 77610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:78782-78811:1:exon

position:78782:1
position: 78782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78811:1
position: 78811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:79061-79190:1:exon

position:79061:1
position: 79061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79190:1
position: 79190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:79919-80182:1:exon

position:79919:1
position: 79919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80182:1
position: 80182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:80839-81043:1:exon

position:80839:1
position: 80839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81043:1
position: 81043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:81896-82020:1:exon

position:81896:1
position: 81896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82020:1
position: 82020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:82111-82901:1:exon

position:82111:1
position: 82111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107050028
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107050028
product: adenylate cyclase type 6-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_046904966.1
SIO_010081: LOC107050028
subclass of: SO_0000673
so part of: LOC107050028
location: join(64678..64922,66547..67252,69317..69466,69770..69891,69975..70086,70566..70693,71384..71542,71619..71760,73126..73251,74006..74031,74126..74273,75023..75120,75775..75862,75948..76064,76625..76783,77435..77610,78782..78811,79061..79190,79919..80182,80839..81043,81896..82020,82111..82895)
location: region:64678-82895:1
so has part: feature:64678-64922:1:exon
so has part: feature:66547-67252:1:exon
so has part: feature:69317-69466:1:exon
so has part: feature:69770-69891:1:exon
so has part: feature:69975-70086:1:exon
so has part: feature:70566-70693:1:exon
so has part: feature:71384-71542:1:exon
so has part: feature:71619-71760:1:exon
so has part: feature:73126-73251:1:exon
so has part: feature:74006-74031:1:exon
so has part: feature:74126-74273:1:exon
so has part: feature:75023-75120:1:exon
so has part: feature:75775-75862:1:exon
so has part: feature:75948-76064:1:exon
so has part: feature:76625-76783:1:exon
so has part: feature:77435-77610:1:exon
so has part: feature:78782-78811:1:exon
so has part: feature:79061-79190:1:exon
so has part: feature:79919-80182:1:exon
so has part: feature:80839-81043:1:exon
so has part: feature:81896-82020:1:exon
so has part: feature:82111-82895:1:exon

position:82895:1
position: 82895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64678-64922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66547-67252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69317-69466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69770-69891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69975-70086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70566-70693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71384-71542:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:71619-71760:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:73126-73251:1:exon

position:73126:1
position: 73126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:74006-74031:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:74126-74273:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75023-75120:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75775-75862:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75948-76064:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:76625-76783:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77435-77610:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:78782-78811:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:79061-79190:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:79919-80182:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:80839-81043:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:81896-82020:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:82111-82895:1:exon

LOC107050028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107050028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate cyclase type 6 isoform X1
translation: MSWFSALLAPKADDRKTAWGDRNGPKPPPRPAALCGRLRRDAPRGPPRADGGAAEDGADPPRPTAPLRAPRLFRSRRFPSLKLELLYQRYFAQLDRRRLAVLLGLQALLCALLLALHCAPGAPNAAVAAALSAAAAAAALLAVLCGRGAFPREAVRALSYAALGLLAAVPLLGAAAVAPRGAAEGVWWGVLCIYAAYALLPVRMRAAVLAGALLAALQLGVTWHLCADEPLLWRQLSANALIFLCTNVVGVCTHYPAEVAQRKAFQETRGYIQARLHLQRENRQQERLLLSVLPQHVAMEMKEDINTKKEDMMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARGDHAHCCVEMGVDMIEAISLVREVTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITWATLQCLNGDYEVEPGNGGERNAYLKEHNIETFLVVGCSQKRKEEKALLAKLQRSHAGSAEALVPRWVPERSFSRPKDCKAFRQMGIDDSTKDNRGAQEPLNPEDEVDEFLGRAIDARSIDQLRKDHVRRFLLTFQSPELERKYSKKVDNRFGGYVGCALLVFCFICCVQLIIFPLSPLMIGAYIGAFLLLSSILFICAVHSCINLFPPVLQRLSRSIVRSRSRSTATAVLVVIIVFITAFINMFSCSRVPLRDCAARALNVSPTAVGPCELRALNISLGAPPGLCRPQGGGCDFPEYVTLSVVLSLLAAAAFLQLSSAGKLLLGAALGGAYLALAEGPHAALFDNADLLLLAHALPSFNATQGECPVEGKVALRYVTPVVLGVFALALYLHAQQVESTARLDFLWKLQATGEKEEMEELQAYNRRLLHNILPKDVAAHFLARERRNDELYYQSCECVAVMFASISNFSEFYVELEANNEGVECLRLLNEIIADFDEIISEQKYRQLEKIKTIGSTYMAASGLNAATYDREGRSHIAALADYAMQLMEQMKYINEHSFNNFQMKIGLNMGPVVAGVIGARKPQYDIWGNTVNVSSRMDSTGVPDRIQVTTDLYQVLAAKGYVLECRGVVKVKGKGEMTTYFLNAGPGGS
SIO_010081: LOC107050028
subclass of: SO_0000673
so part of: LOC107050028
location: join(66548..67252,69317..69466,69770..69891,69975..70086,70566..70693,71384..71542,71619..71760,73123..73251,74006..74031,74126..74273,75023..75120,75775..75862,75948..76064,76625..76783,77435..77610,78782..78811,79061..79190,79919..80182,80839..81043,81896..82020,82111..82239)
location: region:66548-82239:1
so has part: feature:66548-67252:1:exon
so has part: feature:69317-69466:1:exon
so has part: feature:69770-69891:1:exon
so has part: feature:69975-70086:1:exon
so has part: feature:70566-70693:1:exon
so has part: feature:71384-71542:1:exon
so has part: feature:71619-71760:1:exon
so has part: feature:73123-73251:1:exon
so has part: feature:74006-74031:1:exon
so has part: feature:74126-74273:1:exon
so has part: feature:75023-75120:1:exon
so has part: feature:75775-75862:1:exon
so has part: feature:75948-76064:1:exon
so has part: feature:76625-76783:1:exon
so has part: feature:77435-77610:1:exon
so has part: feature:78782-78811:1:exon
so has part: feature:79061-79190:1:exon
so has part: feature:79919-80182:1:exon
so has part: feature:80839-81043:1:exon
so has part: feature:81896-82020:1:exon
so has part: feature:82111-82239:1:exon

XP_040510737.1
type: Protein
SIO_000068: ncbiprotein

position:66548:1
position: 66548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82239:1
position: 82239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66548-67252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69317-69466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69770-69891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69975-70086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70566-70693:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71384-71542:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71619-71760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73123-73251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74006-74031:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:74126-74273:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75023-75120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75775-75862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75948-76064:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:76625-76783:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:77435-77610:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:78782-78811:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79061-79190:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:79919-80182:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:80839-81043:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:81896-82020:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:82111-82239:1:exon

LOC107050028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107050028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate cyclase type 6 isoform X2
translation: MSWFSALLAPKADDRKTAWGDRNGPKPPPRPAALCGRLRRDAPRGPPRADGGAAEDGADPPRPTAPLRAPRLFRSRRFPSLKLELLYQRYFAQLDRRRLAVLLGLQALLCALLLALHCAPGAPNAAVAAALSAAAAAAALLAVLCGRGAFPREAVRALSYAALGLLAAVPLLGAAAVAPRGAAEGVWWGVLCIYAAYALLPVRMRAAVLAGALLAALQLGVTWHLCADEPLLWRQLSANALIFLCTNVVGVCTHYPAEVAQRKAFQETRGYIQARLHLQRENRQQERLLLSVLPQHVAMEMKEDINTKKEDMMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARGDHAHCCVEMGVDMIEAISLVREVTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITWATLQCLNGDYEVEPGNGGERNAYLKEHNIETFLVVGCSQKREEKALLAKLQRSHAGSAEALVPRWVPERSFSRPKDCKAFRQMGIDDSTKDNRGAQEPLNPEDEVDEFLGRAIDARSIDQLRKDHVRRFLLTFQSPELERKYSKKVDNRFGGYVGCALLVFCFICCVQLIIFPLSPLMIGAYIGAFLLLSSILFICAVHSCINLFPPVLQRLSRSIVRSRSRSTATAVLVVIIVFITAFINMFSCSRVPLRDCAARALNVSPTAVGPCELRALNISLGAPPGLCRPQGGGCDFPEYVTLSVVLSLLAAAAFLQLSSAGKLLLGAALGGAYLALAEGPHAALFDNADLLLLAHALPSFNATQGECPVEGKVALRYVTPVVLGVFALALYLHAQQVESTARLDFLWKLQATGEKEEMEELQAYNRRLLHNILPKDVAAHFLARERRNDELYYQSCECVAVMFASISNFSEFYVELEANNEGVECLRLLNEIIADFDEIISEQKYRQLEKIKTIGSTYMAASGLNAATYDREGRSHIAALADYAMQLMEQMKYINEHSFNNFQMKIGLNMGPVVAGVIGARKPQYDIWGNTVNVSSRMDSTGVPDRIQVTTDLYQVLAAKGYVLECRGVVKVKGKGEMTTYFLNAGPGGS
SIO_010081: LOC107050028
subclass of: SO_0000673
so part of: LOC107050028
location: join(66548..67252,69317..69466,69770..69891,69975..70086,70566..70693,71384..71542,71619..71760,73126..73251,74006..74031,74126..74273,75023..75120,75775..75862,75948..76064,76625..76783,77435..77610,78782..78811,79061..79190,79919..80182,80839..81043,81896..82020,82111..82239)
location: region:66548-82239:1
so has part: feature:66548-67252:1:exon
so has part: feature:69317-69466:1:exon
so has part: feature:69770-69891:1:exon
so has part: feature:69975-70086:1:exon
so has part: feature:70566-70693:1:exon
so has part: feature:71384-71542:1:exon
so has part: feature:71619-71760:1:exon
so has part: feature:73126-73251:1:exon
so has part: feature:74006-74031:1:exon
so has part: feature:74126-74273:1:exon
so has part: feature:75023-75120:1:exon
so has part: feature:75775-75862:1:exon
so has part: feature:75948-76064:1:exon
so has part: feature:76625-76783:1:exon
so has part: feature:77435-77610:1:exon
so has part: feature:78782-78811:1:exon
so has part: feature:79061-79190:1:exon
so has part: feature:79919-80182:1:exon
so has part: feature:80839-81043:1:exon
so has part: feature:81896-82020:1:exon
so has part: feature:82111-82239:1:exon

XP_046760922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66548-67252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69317-69466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69770-69891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69975-70086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70566-70693:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71384-71542:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71619-71760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73126-73251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74006-74031:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:74126-74273:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75023-75120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75775-75862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75948-76064:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:76625-76783:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:77435-77610:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:78782-78811:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79061-79190:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:79919-80182:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:80839-81043:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:81896-82020:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:82111-82239:1:exon

CCNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: CCNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 83250..92062
location: region:83250-92062:1
so has part: feature:83250-92062:1:exon
subclass of: SO_0000010

100859215
type: Gene
SIO_000068: ncbigene

position:83250:1
position: 83250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92062:1
position: 92062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83250-92062:1:exon

CCNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CCNT1
product: cyclin T1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145675.3
SIO_010081: CCNT1
subclass of: SO_0000673
so part of: CCNT1
location: join(83250..83443,83834..83915,84377..84505,85164..85224,86146..86208,86837..86882,89012..89175,89253..89435,89522..89592,89840..92062)
location: region:83250-92062:1
so has part: feature:83250-83443:1:exon
so has part: feature:83834-83915:1:exon
so has part: feature:84377-84505:1:exon
so has part: feature:85164-85224:1:exon
so has part: feature:86146-86208:1:exon
so has part: feature:86837-86882:1:exon
so has part: feature:89012-89175:1:exon
so has part: feature:89253-89435:1:exon
so has part: feature:89522-89592:1:exon
so has part: feature:89840-92062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83250-83443:1:exon

position:83443:1
position: 83443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83834-83915:1:exon

position:83834:1
position: 83834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83915:1
position: 83915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84377-84505:1:exon

position:84377:1
position: 84377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84505:1
position: 84505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85164-85224:1:exon

position:85164:1
position: 85164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85224:1
position: 85224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:86146-86208:1:exon

position:86146:1
position: 86146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86208:1
position: 86208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86837-86882:1:exon

position:86837:1
position: 86837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86882:1
position: 86882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:89012-89175:1:exon

position:89012:1
position: 89012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89175:1
position: 89175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89253-89435:1:exon

position:89253:1
position: 89253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89435:1
position: 89435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:89522-89592:1:exon

position:89522:1
position: 89522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89592:1
position: 89592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:89840-92062:1:exon

position:89840:1
position: 89840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CCNT1
product: cyclin T1, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273672.3
SIO_010081: CCNT1
subclass of: SO_0000673
so part of: CCNT1
location: join(83250..83443,83834..83915,84377..84505,85164..85224,86146..86208,86837..86882,89012..89175,89522..89592,89840..92062)
location: region:83250-92062:1
so has part: feature:83250-83443:1:exon
so has part: feature:83834-83915:1:exon
so has part: feature:84377-84505:1:exon
so has part: feature:85164-85224:1:exon
so has part: feature:86146-86208:1:exon
so has part: feature:86837-86882:1:exon
so has part: feature:89012-89175:1:exon
so has part: feature:89522-89592:1:exon
so has part: feature:89840-92062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83250-83443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83834-83915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84377-84505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85164-85224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86146-86208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86837-86882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89012-89175:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89522-89592:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89840-92062:1:exon

CCNT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: CCNT1
product: cyclin T1, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_001462219.4
SIO_010081: CCNT1
so part of: CCNT1
location: join(83250..83443,83834..83915,84377..84505,85164..85224,86146..86208,86837..86882,89522..89592,89840..89918)
location: region:83250-89918:1
so has part: feature:83250-83443:1:exon
so has part: feature:83834-83915:1:exon
so has part: feature:84377-84505:1:exon
so has part: feature:85164-85224:1:exon
so has part: feature:86146-86208:1:exon
so has part: feature:86837-86882:1:exon
so has part: feature:89522-89592:1:exon
so has part: feature:89840-89918:1:exon

position:89918:1
position: 89918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83250-83443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83834-83915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84377-84505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85164-85224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86146-86208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86837-86882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89522-89592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89840-89918:1:exon

CCNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CCNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-T1 isoform X1
translation: MEASAGGGAARRWYFTREQLDRSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMVQSFTQFHRNSVAPAALFLAAKVEEQPRKLDYVIKVAHACLHPQEPPPDTRSEAYLQQAQDLVILESIILQTLGFEITIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDGTVTLELLDDTAASWAEGLLLLPWFPVQQLLWYNRDGKRHGEMSLNAVSGAGCQHCPSWSGSIPSVAPSIKLTHEFLQILEKTPNRLKRIRNWRASQAARKSKADEHGEDEGLSEQTILNMISRNNSSDMNIAGLMSMSTSSTAAAGPSVPTAADSPGNQSAADAAPAERWLSQHPPSKLDATQSHRTAEGTSGAEHPAQQQQQQQDGAGYPKQGVKNAPSAKVSLKEYRAKHAEELAAQKRQLENMEANVRSQYAYAAKNLLVQQQREREVQQDGNPSPIILKIPIAENPERPPGPEKGDKSSALKLRIPMGGGGGERPLPSKQEEIKMRIKVPSERPDDGGATASIAAKSREHKEKHKGHSSNHHHHNHHSHKHLHPQLGAGPSAALSKRPGDSKHAGQPGAVPHKSCGLFGSSRKRPPPEEGSAHEHQPKVSKGPKGPAPPFPYPHLPGGGHSSDAIASLPTLPSAPSKARGGGHGKSDKGPAGANGHNATQPSDYQDTVNMLHSLLSAQGMQPSQAPPFEFHAYGELLNPRQSARAANTDRPRPPPLPSEPPPPLPPLPK
SIO_010081: CCNT1
subclass of: SO_0000673
so part of: CCNT1
location: join(83280..83443,83834..83915,84377..84505,85164..85224,86146..86208,86837..86882,89012..89175,89253..89435,89522..89592,89840..91252)
location: region:83280-91252:1
so has part: feature:83280-83443:1:exon
so has part: feature:83834-83915:1:exon
so has part: feature:84377-84505:1:exon
so has part: feature:85164-85224:1:exon
so has part: feature:86146-86208:1:exon
so has part: feature:86837-86882:1:exon
so has part: feature:89012-89175:1:exon
so has part: feature:89253-89435:1:exon
so has part: feature:89522-89592:1:exon
so has part: feature:89840-91252:1:exon

XP_025001443.1
type: Protein
SIO_000068: ncbiprotein

position:83280:1
position: 83280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91252:1
position: 91252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83280-83443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83834-83915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84377-84505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85164-85224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86146-86208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86837-86882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89012-89175:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89253-89435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89522-89592:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89840-91252:1:exon

CCNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CCNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-T1 isoform X2
translation: MEASAGGGAARRWYFTREQLDRSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMVQSFTQFHRNSVAPAALFLAAKVEEQPRKLDYVIKVAHACLHPQEPPPDTRSEAYLQQAQDLVILESIILQTLGFEITIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDGTVTLELLDELTHEFLQILEKTPNRLKRIRNWRASQAARKSKADEHGEDEGLSEQTILNMISRNNSSDMNIAGLMSMSTSSTAAAGPSVPTAADSPGNQSAADAAPAERWLSQHPPSKLDATQSHRTAEGTSGAEHPAQQQQQQQDGAGYPKQGVKNAPSAKVSLKEYRAKHAEELAAQKRQLENMEANVRSQYAYAAKNLLVQQQREREVQQDGNPSPIILKIPIAENPERPPGPEKGDKSSALKLRIPMGGGGGERPLPSKQEEIKMRIKVPSERPDDGGATASIAAKSREHKEKHKGHSSNHHHHNHHSHKHLHPQLGAGPSAALSKRPGDSKHAGQPGAVPHKSCGLFGSSRKRPPPEEGSAHEHQPKVSKGPKGPAPPFPYPHLPGGGHSSDAIASLPTLPSAPSKARGGGHGKSDKGPAGANGHNATQPSDYQDTVNMLHSLLSAQGMQPSQAPPFEFHAYGELLNPRQSARAANTDRPRPPPLPSEPPPPLPPLPK
SIO_010081: CCNT1
subclass of: SO_0000673
so part of: CCNT1
location: join(83280..83443,83834..83915,84377..84505,85164..85224,86146..86208,86837..86882,89012..89175,89522..89592,89840..91252)
location: region:83280-91252:1
so has part: feature:83280-83443:1:exon
so has part: feature:83834-83915:1:exon
so has part: feature:84377-84505:1:exon
so has part: feature:85164-85224:1:exon
so has part: feature:86146-86208:1:exon
so has part: feature:86837-86882:1:exon
so has part: feature:89012-89175:1:exon
so has part: feature:89522-89592:1:exon
so has part: feature:89840-91252:1:exon

XP_015129158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83280-83443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83834-83915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84377-84505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85164-85224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86146-86208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86837-86882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89012-89175:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89522-89592:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89840-91252:1:exon

CCNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CCNT1
product: cyclin T1, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145676.3
SIO_010081: CCNT1
subclass of: SO_0000673
so part of: CCNT1
location: join(84401..84505,86146..86208,86837..86882,89012..89175,89253..89435,89522..89592,89840..92062)
location: region:84401-92062:1
so has part: feature:84401-84505:1:exon
so has part: feature:86146-86208:1:exon
so has part: feature:86837-86882:1:exon
so has part: feature:89012-89175:1:exon
so has part: feature:89253-89435:1:exon
so has part: feature:89522-89592:1:exon
so has part: feature:89840-92062:1:exon

position:84401:1
position: 84401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84401-84505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86146-86208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86837-86882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89012-89175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89253-89435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89522-89592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89840-92062:1:exon

CCNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CCNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-T1 isoform X3
translation: MATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDGTVTLELLDDTAASWAEGLLLLPWFPVQQLLWYNRDGKRHGEMSLNAVSGAGCQHCPSWSGSIPSVAPSIKLTHEFLQILEKTPNRLKRIRNWRASQAARKSKADEHGEDEGLSEQTILNMISRNNSSDMNIAGLMSMSTSSTAAAGPSVPTAADSPGNQSAADAAPAERWLSQHPPSKLDATQSHRTAEGTSGAEHPAQQQQQQQDGAGYPKQGVKNAPSAKVSLKEYRAKHAEELAAQKRQLENMEANVRSQYAYAAKNLLVQQQREREVQQDGNPSPIILKIPIAENPERPPGPEKGDKSSALKLRIPMGGGGGERPLPSKQEEIKMRIKVPSERPDDGGATASIAAKSREHKEKHKGHSSNHHHHNHHSHKHLHPQLGAGPSAALSKRPGDSKHAGQPGAVPHKSCGLFGSSRKRPPPEEGSAHEHQPKVSKGPKGPAPPFPYPHLPGGGHSSDAIASLPTLPSAPSKARGGGHGKSDKGPAGANGHNATQPSDYQDTVNMLHSLLSAQGMQPSQAPPFEFHAYGELLNPRQSARAANTDRPRPPPLPSEPPPPLPPLPK
SIO_010081: CCNT1
subclass of: SO_0000673
so part of: CCNT1
location: join(86869..86882,89012..89175,89253..89435,89522..89592,89840..91252)
location: region:86869-91252:1
so has part: feature:86869-86882:1:exon
so has part: feature:89012-89175:1:exon
so has part: feature:89253-89435:1:exon
so has part: feature:89522-89592:1:exon
so has part: feature:89840-91252:1:exon

XP_025001444.1
type: Protein
SIO_000068: ncbiprotein

position:86869:1
position: 86869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86869-86882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89012-89175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89253-89435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89522-89592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89840-91252:1:exon

KANSL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: KANSL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 92407..103977
location: region:92407-103977:1
so has part: feature:92407-103977:1:exon
subclass of: SO_0000010

426401
type: Gene
SIO_000068: ncbigene

position:92407:1
position: 92407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103977:1
position: 103977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92407-103977:1:exon

KANSL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KANSL2
product: KAT8 regulatory NSL complex subunit 2, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040654807.2
SIO_010081: KANSL2
subclass of: SO_0000673
so part of: KANSL2
location: join(92407..92446,93763..94025,95572..95750,96593..96707,96853..97016,97936..98102,98908..99046,99167..99403,100783..101081,102100..102318,103109..103187,103849..103977)
location: region:92407-103977:1
so has part: feature:92407-92446:1:exon
so has part: feature:93763-94025:1:exon
so has part: feature:95572-95750:1:exon
so has part: feature:96593-96707:1:exon
so has part: feature:96853-97016:1:exon
so has part: feature:97936-98102:1:exon
so has part: feature:98908-99046:1:exon
so has part: feature:99167-99403:1:exon
so has part: feature:100783-101081:1:exon
so has part: feature:102100-102318:1:exon
so has part: feature:103109-103187:1:exon
so has part: feature:103849-103977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92407-92446:1:exon

position:92446:1
position: 92446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93763-94025:1:exon

position:93763:1
position: 93763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94025:1
position: 94025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95572-95750:1:exon

position:95572:1
position: 95572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95750:1
position: 95750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96593-96707:1:exon

position:96593:1
position: 96593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96707:1
position: 96707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96853-97016:1:exon

position:96853:1
position: 96853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97016:1
position: 97016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:97936-98102:1:exon

position:97936:1
position: 97936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98102:1
position: 98102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:98908-99046:1:exon

position:98908:1
position: 98908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99046:1
position: 99046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:99167-99403:1:exon

position:99167:1
position: 99167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99403:1
position: 99403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:100783-101081:1:exon

position:100783:1
position: 100783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101081:1
position: 101081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:102100-102318:1:exon

position:102100:1
position: 102100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102318:1
position: 102318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:103109-103187:1:exon

position:103109:1
position: 103109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103187:1
position: 103187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:103849-103977:1:exon

position:103849:1
position: 103849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KANSL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KANSL2
product: KAT8 regulatory NSL complex subunit 2, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654806.2
SIO_010081: KANSL2
subclass of: SO_0000673
so part of: KANSL2
location: join(92407..92446,93763..94025,95572..95750,96593..96707,96853..97016,97936..98102,98908..99046,99167..99403,100783..101081,102100..102318,103109..103337)
location: region:92407-103337:1
so has part: feature:92407-92446:1:exon
so has part: feature:93763-94025:1:exon
so has part: feature:95572-95750:1:exon
so has part: feature:96593-96707:1:exon
so has part: feature:96853-97016:1:exon
so has part: feature:97936-98102:1:exon
so has part: feature:98908-99046:1:exon
so has part: feature:99167-99403:1:exon
so has part: feature:100783-101081:1:exon
so has part: feature:102100-102318:1:exon
so has part: feature:103109-103337:1:exon

position:103337:1
position: 103337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92407-92446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93763-94025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95572-95750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96593-96707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96853-97016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97936-98102:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98908-99046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99167-99403:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100783-101081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102100-102318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103109-103337:1:exon

KANSL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KANSL2
product: KAT8 regulatory NSL complex subunit 2, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145678.3
SIO_010081: KANSL2
subclass of: SO_0000673
so part of: KANSL2
location: join(92407..92446,93763..94025,95572..95750,96593..96707,96853..97016,97936..98102,98908..99004,100828..101081,102100..102318,103109..103337)
location: region:92407-103337:1
so has part: feature:92407-92446:1:exon
so has part: feature:93763-94025:1:exon
so has part: feature:95572-95750:1:exon
so has part: feature:96593-96707:1:exon
so has part: feature:96853-97016:1:exon
so has part: feature:97936-98102:1:exon
so has part: feature:98908-99004:1:exon
so has part: feature:100828-101081:1:exon
so has part: feature:102100-102318:1:exon
so has part: feature:103109-103337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92407-92446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93763-94025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95572-95750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96593-96707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96853-97016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97936-98102:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98908-99004:1:exon

position:99004:1
position: 99004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:100828-101081:1:exon

position:100828:1
position: 100828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102100-102318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103109-103337:1:exon

KANSL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: KANSL2
product: KAT8 regulatory NSL complex subunit 2, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040654808.2
SIO_010081: KANSL2
subclass of: SO_0000673
so part of: KANSL2
location: join(92407..92446,93763..94025,95572..95750,96593..96707,96853..97016,97936..98102,98908..99046,99167..99403,100783..101081,101914..102093)
location: region:92407-102093:1
so has part: feature:92407-92446:1:exon
so has part: feature:93763-94025:1:exon
so has part: feature:95572-95750:1:exon
so has part: feature:96593-96707:1:exon
so has part: feature:96853-97016:1:exon
so has part: feature:97936-98102:1:exon
so has part: feature:98908-99046:1:exon
so has part: feature:99167-99403:1:exon
so has part: feature:100783-101081:1:exon
so has part: feature:101914-102093:1:exon

position:102093:1
position: 102093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92407-92446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93763-94025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95572-95750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96593-96707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96853-97016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97936-98102:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98908-99046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99167-99403:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100783-101081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101914-102093:1:exon

position:101914:1
position: 101914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KANSL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KANSL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KAT8 regulatory NSL complex subunit 2 isoform X1
translation: MNRIRIHVLPSNRGRLTPIPRPQEPQCCAFSQRQCSQPRLEGHDFCIKHILEDRSAPFKQCSYISAKNGKRCPNAAPKPEKKDGVSFCAEHARRNALALQAQLKKSNPGPVSETLLCQLSSYARTELGSHSTDSGRSEASRILDEDSWSDGEQDPITVDQTWRGDPDSEADSIDSDQEDPLKHAGVYTAEEVALIMREKLIRLQSLYIDQFKRLQHLLKEKKRRFLHSRKAEHDAVGSSLLTGPEGLTAKERDNLKRLKCLRRYRQRYGVEALLHRQLKERRVMATDGAAQQAHTTRSSQRCLAFVDDVRCSNPSLPMARHCLTRILPSCCALGPPAHGCQLSSDTPRARLGTGDGHGDPPAHPLQVPHCGSHAGLCRAWIGAGGWSGSCTLLCPLSCCSSGAALRHSSGCGTPTPRVTLWPYCTFPLTPISDICQDTNQTLFKPCQGSEEVPCNKPVPISLSEEPCCPLHLRLPPQMYVPEQVLAVPEELEAAPTDLYLSAAELQPTESLPLEFSDDLDVVGDGMQCPPSPLLFDPSAALAPSIRDVAEAPIDILALEDPPHAAVPPPHVAPTDRGTHSFATAAVSPAQSAPRPEDPPNGTLQPSAVS
SIO_010081: KANSL2
subclass of: SO_0000673
so part of: KANSL2
location: join(93775..94025,95572..95750,96593..96707,96853..97016,97936..98102,98908..99046,99167..99403,100783..101081,102100..102318,103109..103168)
location: region:93775-103168:1
so has part: feature:93775-94025:1:exon
so has part: feature:95572-95750:1:exon
so has part: feature:96593-96707:1:exon
so has part: feature:96853-97016:1:exon
so has part: feature:97936-98102:1:exon
so has part: feature:98908-99046:1:exon
so has part: feature:99167-99403:1:exon
so has part: feature:100783-101081:1:exon
so has part: feature:102100-102318:1:exon
so has part: feature:103109-103168:1:exon

XP_040510740.1
type: Protein
SIO_000068: ncbiprotein

position:93775:1
position: 93775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103168:1
position: 103168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93775-94025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95572-95750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96593-96707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96853-97016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97936-98102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98908-99046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99167-99403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100783-101081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102100-102318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103109-103168:1:exon

KANSL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KANSL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KAT8 regulatory NSL complex subunit 2 isoform X1
translation: MNRIRIHVLPSNRGRLTPIPRPQEPQCCAFSQRQCSQPRLEGHDFCIKHILEDRSAPFKQCSYISAKNGKRCPNAAPKPEKKDGVSFCAEHARRNALALQAQLKKSNPGPVSETLLCQLSSYARTELGSHSTDSGRSEASRILDEDSWSDGEQDPITVDQTWRGDPDSEADSIDSDQEDPLKHAGVYTAEEVALIMREKLIRLQSLYIDQFKRLQHLLKEKKRRFLHSRKAEHDAVGSSLLTGPEGLTAKERDNLKRLKCLRRYRQRYGVEALLHRQLKERRVMATDGAAQQAHTTRSSQRCLAFVDDVRCSNPSLPMARHCLTRILPSCCALGPPAHGCQLSSDTPRARLGTGDGHGDPPAHPLQVPHCGSHAGLCRAWIGAGGWSGSCTLLCPLSCCSSGAALRHSSGCGTPTPRVTLWPYCTFPLTPISDICQDTNQTLFKPCQGSEEVPCNKPVPISLSEEPCCPLHLRLPPQMYVPEQVLAVPEELEAAPTDLYLSAAELQPTESLPLEFSDDLDVVGDGMQCPPSPLLFDPSAALAPSIRDVAEAPIDILALEDPPHAAVPPPHVAPTDRGTHSFATAAVSPAQSAPRPEDPPNGTLQPSAVS
SIO_010081: KANSL2
subclass of: SO_0000673
so part of: KANSL2
location: join(93775..94025,95572..95750,96593..96707,96853..97016,97936..98102,98908..99046,99167..99403,100783..101081,102100..102318,103109..103168)
location: region:93775-103168:1
so has part: feature:93775-94025:1:exon
so has part: feature:95572-95750:1:exon
so has part: feature:96593-96707:1:exon
so has part: feature:96853-97016:1:exon
so has part: feature:97936-98102:1:exon
so has part: feature:98908-99046:1:exon
so has part: feature:99167-99403:1:exon
so has part: feature:100783-101081:1:exon
so has part: feature:102100-102318:1:exon
so has part: feature:103109-103168:1:exon

XP_040510741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93775-94025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95572-95750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96593-96707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96853-97016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97936-98102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98908-99046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99167-99403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100783-101081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102100-102318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103109-103168:1:exon

KANSL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KANSL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KAT8 regulatory NSL complex subunit 2 isoform X3
translation: MNRIRIHVLPSNRGRLTPIPRPQEPQCCAFSQRQCSQPRLEGHDFCIKHILEDRSAPFKQCSYISAKNGKRCPNAAPKPEKKDGVSFCAEHARRNALALQAQLKKSNPGPVSETLLCQLSSYARTELGSHSTDSGRSEASRILDEDSWSDGEQDPITVDQTWRGDPDSEADSIDSDQEDPLKHAGVYTAEEVALIMREKLIRLQSLYIDQFKRLQHLLKEKKRRFLHSRKAEHDAVGSSLLTGPEGLTAKERDNLKRLKCLRRYRQRYGVEALLHRQLKERRVMATDGAAQQAHTTRSSQRCLAFVDDVRCSNPSLPMARHCLTHICQDTNQTLFKPCQGSEEVPCNKPVPISLSEEPCCPLHLRLPPQMYVPEQVLAVPEELEAAPTDLYLSAAELQPTESLPLEFSDDLDVVGDGMQCPPSPLLFDPSAALAPSIRDVAEAPIDILALEDPPHAAVPPPHVAPTDRGTHSFATAAVSPAQSAPRPEDPPNGTLQPSAVS
SIO_010081: KANSL2
subclass of: SO_0000673
so part of: KANSL2
location: join(93775..94025,95572..95750,96593..96707,96853..97016,97936..98102,98908..99004,100828..101081,102100..102318,103109..103168)
location: region:93775-103168:1
so has part: feature:93775-94025:1:exon
so has part: feature:95572-95750:1:exon
so has part: feature:96593-96707:1:exon
so has part: feature:96853-97016:1:exon
so has part: feature:97936-98102:1:exon
so has part: feature:98908-99004:1:exon
so has part: feature:100828-101081:1:exon
so has part: feature:102100-102318:1:exon
so has part: feature:103109-103168:1:exon

XP_025001446.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93775-94025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95572-95750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96593-96707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96853-97016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97936-98102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98908-99004:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100828-101081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102100-102318:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103109-103168:1:exon

KANSL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: KANSL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KAT8 regulatory NSL complex subunit 2 isoform X2
translation: MNRIRIHVLPSNRGRLTPIPRPQEPQCCAFSQRQCSQPRLEGHDFCIKHILEDRSAPFKQCSYISAKNGKRCPNAAPKPEKKDGVSFCAEHARRNALALQAQLKKSNPGPVSETLLCQLSSYARTELGSHSTDSGRSEASRILDEDSWSDGEQDPITVDQTWRGDPDSEADSIDSDQEDPLKHAGVYTAEEVALIMREKLIRLQSLYIDQFKRLQHLLKEKKRRFLHSRKAEHDAVGSSLLTGPEGLTAKERDNLKRLKCLRRYRQRYGVEALLHRQLKERRVMATDGAAQQAHTTRSSQRCLAFVDDVRCSNPSLPMARHCLTRILPSCCALGPPAHGCQLSSDTPRARLGTGDGHGDPPAHPLQVPHCGSHAGLCRAWIGAGGWSGSCTLLCPLSCCSSGAALRHSSGCGTPTPRVTLWPYCTFPLTPISDICQDTNQTLFKPCQGSEEVPCNKPVPISLSEEPCCPLHLRLPPQMYVPEQVLAVPEELEAAPTDLYLSAAELQPTESLPLEFSDDRFLPTPPIPAGTHGDFNPPTPPRSS
SIO_010081: KANSL2
subclass of: SO_0000673
so part of: KANSL2
location: join(93775..94025,95572..95750,96593..96707,96853..97016,97936..98102,98908..99046,99167..99403,100783..101081,101914..101994)
location: region:93775-101994:1
so has part: feature:93775-94025:1:exon
so has part: feature:95572-95750:1:exon
so has part: feature:96593-96707:1:exon
so has part: feature:96853-97016:1:exon
so has part: feature:97936-98102:1:exon
so has part: feature:98908-99046:1:exon
so has part: feature:99167-99403:1:exon
so has part: feature:100783-101081:1:exon
so has part: feature:101914-101994:1:exon

XP_040510742.1
type: Protein
SIO_000068: ncbiprotein

position:101994:1
position: 101994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93775-94025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95572-95750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96593-96707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96853-97016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97936-98102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98908-99046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99167-99403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100783-101081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101914-101994:1:exon

NCKAP5L
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: NCKAP5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 104091..111195
location: region:104091-111195:1
so has part: feature:104091-111195:1:exon
subclass of: SO_0000010

107050766
type: Gene
SIO_000068: ncbigene

position:104091:1
position: 104091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111195:1
position: 111195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104091-111195:1:exon

NCKAP5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: NCKAP5L
product: NCK associated protein 5 like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_040654932.2
SIO_010081: NCKAP5L
subclass of: SO_0000673
so part of: NCKAP5L
location: join(104091..104140,104224..104400,104900..104968,105057..105095,105871..105993,106076..106162,106333..107937,108694..108802,108874..108952,109623..109910,110259..110365,110695..111195)
location: region:104091-111195:1
so has part: feature:104091-104140:1:exon
so has part: feature:104224-104400:1:exon
so has part: feature:104900-104968:1:exon
so has part: feature:105057-105095:1:exon
so has part: feature:105871-105993:1:exon
so has part: feature:106076-106162:1:exon
so has part: feature:106333-107937:1:exon
so has part: feature:108694-108802:1:exon
so has part: feature:108874-108952:1:exon
so has part: feature:109623-109910:1:exon
so has part: feature:110259-110365:1:exon
so has part: feature:110695-111195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104091-104140:1:exon

position:104140:1
position: 104140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104224-104400:1:exon

position:104224:1
position: 104224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104400:1
position: 104400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104900-104968:1:exon

position:104900:1
position: 104900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104968:1
position: 104968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105057-105095:1:exon

position:105057:1
position: 105057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105095:1
position: 105095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:105871-105993:1:exon

position:105871:1
position: 105871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105993:1
position: 105993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:106076-106162:1:exon

position:106076:1
position: 106076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106162:1
position: 106162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:106333-107937:1:exon

position:106333:1
position: 106333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107937:1
position: 107937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108694-108802:1:exon

position:108694:1
position: 108694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108802:1
position: 108802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:108874-108952:1:exon

position:108874:1
position: 108874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108952:1
position: 108952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:109623-109910:1:exon

position:109623:1
position: 109623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109910:1
position: 109910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:110259-110365:1:exon

position:110259:1
position: 110259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110365:1
position: 110365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:110695-111195:1:exon

position:110695:1
position: 110695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCKAP5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: NCKAP5L
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nck-associated protein 5-like isoform X1
translation: MAESLAEAPGDARGGGGANRELLQRLRELEEENSALAQANENQRETYERCLDEVANHVVQALLNQKDLREECLKLKKRVAELERQNRALSDLCQQRLQPPPGPPPAQLRPLSPDPPGSPERPPAPPPHGCCAPPAQVTPLGPPSITALSPPLCPTAAPPLDALSPFLKKKAQILEVLRRLEEETDPLLGGPPHTAPPTPEPPLPPYLGLYEEESPEGGCPHTWGCPQPHCCPHPWGSKGRDPPPALRLSPQLPRASRIPCRSGPPETPPESPNFPQPHTYGAAPPPQPHTYGATPSPQPQSHGSAPPPQPHTYGGAPSPGTPQPQSCGASPQGPPPPHAYGSTPPPPPHTYGSTPPPQPHTYGSAPPPHPYDPPPPPPSIPSDRAAASPPPSRRSVPGGSAQCRRPFKKPPESSAAPPPLKERSGAPTKSGPPPGRPSARSGRSGPKPPDPIGGGGGGAGPRGRPAAGGGGGGGGGGPPHTAPVPAAPNPPPPPAAGAHSAIEEKVMKGIEENVLRLQGGGGDGKGKGGGGGGGGGGGGGGGGGGLAGWLGLRRSKLPALRGRGEWGPAALRRDGKTAGGRKAETEGVNISRLMERAEDLRRALRDGVRDGVRDGVRDGVRDGVRDGVRDGEAALRGAGREELKGRGGAARRRAAGRDGTAREFVQRLLERVDGKDASYESRLEHKRDLCRNGIVGHLRGGQEPPHKVPSVGLRGELHPDERLSELGPLQHFAACSSLTRTLDSGIGTFPPPDYGGVPTKGAPKPRGIAAPPPSAPPAPPPPPPNTKVPRKARTLERELPGVEELMGKRRSGPTAPHSGVSAAQRGGLQADAVKPRRAQQGKNWTFPNARSCGAADPFLCTAGGMSLLAPPHYSLPSAAHPRGAAHLRTPPPPLPPPLSAGSSRTPSASDVGDEGARRCGRGGGAAAPPGLEHSESLSDSLYDSLSSCGSQG
SIO_010081: NCKAP5L
subclass of: SO_0000673
so part of: NCKAP5L
location: join(104311..104400,104900..104968,105057..105095,105871..105993,106076..106162,106333..107937,108694..108802,108874..108952,109623..109910,110259..110365,110695..110959)
location: region:104311-110959:1
so has part: feature:104311-104400:1:exon
so has part: feature:104900-104968:1:exon
so has part: feature:105057-105095:1:exon
so has part: feature:105871-105993:1:exon
so has part: feature:106076-106162:1:exon
so has part: feature:106333-107937:1:exon
so has part: feature:108694-108802:1:exon
so has part: feature:108874-108952:1:exon
so has part: feature:109623-109910:1:exon
so has part: feature:110259-110365:1:exon
so has part: feature:110695-110959:1:exon

XP_040510866.2
type: Protein
SIO_000068: ncbiprotein

position:104311:1
position: 104311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110959:1
position: 110959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104311-104400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104900-104968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105057-105095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105871-105993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106076-106162:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:106333-107937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108694-108802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108874-108952:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109623-109910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:110259-110365:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110695-110959:1:exon

TMBIM6
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: TMBIM6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(111258..116479)
location: region:111258-116479:-1
so has part: feature:111258-116479:-1:exon
subclass of: SO_0000010

107050924
type: Gene
SIO_000068: ncbigene

position:111258:-1
position: 111258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116479:-1
position: 116479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111258-116479:-1:exon

TMBIM6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: TMBIM6
product: transmembrane BAX inhibitor motif containing 6, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654813.2
SIO_010081: TMBIM6
subclass of: SO_0000673
so part of: TMBIM6
location: complement(join(111258..111805,112307..112379,112504..112604,112714..112793,113369..113472,113855..113897,114034..114154,114784..114892,114966..115057,116432..116479))
location: region:111258-116479:-1
so has part: feature:116432-116479:-1:exon
so has part: feature:114966-115057:-1:exon
so has part: feature:114784-114892:-1:exon
so has part: feature:114034-114154:-1:exon
so has part: feature:113855-113897:-1:exon
so has part: feature:113369-113472:-1:exon
so has part: feature:112714-112793:-1:exon
so has part: feature:112504-112604:-1:exon
so has part: feature:112307-112379:-1:exon
so has part: feature:111258-111805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116432-116479:-1:exon

position:116432:-1
position: 116432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114966-115057:-1:exon

position:114966:-1
position: 114966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115057:-1
position: 115057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114784-114892:-1:exon

position:114784:-1
position: 114784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114892:-1
position: 114892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114034-114154:-1:exon

position:114034:-1
position: 114034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114154:-1
position: 114154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113855-113897:-1:exon

position:113855:-1
position: 113855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113897:-1
position: 113897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:113369-113472:-1:exon

position:113369:-1
position: 113369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113472:-1
position: 113472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:112714-112793:-1:exon

position:112714:-1
position: 112714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112793:-1
position: 112793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:112504-112604:-1:exon

position:112504:-1
position: 112504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112604:-1
position: 112604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:112307-112379:-1:exon

position:112307:-1
position: 112307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112379:-1
position: 112379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:111258-111805:-1:exon

position:111805:-1
position: 111805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMBIM6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: TMBIM6
product: transmembrane BAX inhibitor motif containing 6, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654814.2
SIO_010081: TMBIM6
subclass of: SO_0000673
so part of: TMBIM6
location: complement(join(111258..111805,112307..112379,112504..112604,112714..112793,113369..113472,113855..113897,114034..114154,114784..114892,114966..115057,116230..116479))
location: region:111258-116479:-1
so has part: feature:116230-116479:-1:exon
so has part: feature:114966-115057:-1:exon
so has part: feature:114784-114892:-1:exon
so has part: feature:114034-114154:-1:exon
so has part: feature:113855-113897:-1:exon
so has part: feature:113369-113472:-1:exon
so has part: feature:112714-112793:-1:exon
so has part: feature:112504-112604:-1:exon
so has part: feature:112307-112379:-1:exon
so has part: feature:111258-111805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116230-116479:-1:exon

position:116230:-1
position: 116230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114966-115057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114784-114892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114034-114154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113855-113897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113369-113472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:112714-112793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112504-112604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112307-112379:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111258-111805:-1:exon

TMBIM6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: TMBIM6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bax inhibitor 1 isoform X1
translation: MNVFDRSINLDALFKFSHISASTQEHLKRVYGSFALCMLLAAVGAYVNVVTHLFQFSLLSGLGSLGLMVWLTATPHSRETEQQRLGMLAGFAFLTGINLGPLLQMCIAINPSIIPTAFLGTAAIFGCFSLSALYARRRSFLYLGGFLLSGLTLLLLSSLLNALLGSVWLFTANLYVGLMLMCGFVLFDTQLIIEKAESGDKDYIWHCVDLFLDFVNIFRELLMILGVNENKKKEKK
SIO_010081: TMBIM6
subclass of: SO_0000673
so part of: TMBIM6
location: complement(join(111782..111805,112307..112379,112504..112604,112714..112793,113369..113472,113855..113897,114034..114154,114784..114892,114966..115021))
location: region:111782-115021:-1
so has part: feature:114966-115021:-1:exon
so has part: feature:114784-114892:-1:exon
so has part: feature:114034-114154:-1:exon
so has part: feature:113855-113897:-1:exon
so has part: feature:113369-113472:-1:exon
so has part: feature:112714-112793:-1:exon
so has part: feature:112504-112604:-1:exon
so has part: feature:112307-112379:-1:exon
so has part: feature:111782-111805:-1:exon

XP_040510748.1
type: Protein
SIO_000068: ncbiprotein

position:111782:-1
position: 111782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115021:-1
position: 115021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114966-115021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114784-114892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114034-114154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113855-113897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113369-113472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112714-112793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:112504-112604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112307-112379:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:111782-111805:-1:exon

TMBIM6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: TMBIM6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bax inhibitor 1 isoform X1
translation: MNVFDRSINLDALFKFSHISASTQEHLKRVYGSFALCMLLAAVGAYVNVVTHLFQFSLLSGLGSLGLMVWLTATPHSRETEQQRLGMLAGFAFLTGINLGPLLQMCIAINPSIIPTAFLGTAAIFGCFSLSALYARRRSFLYLGGFLLSGLTLLLLSSLLNALLGSVWLFTANLYVGLMLMCGFVLFDTQLIIEKAESGDKDYIWHCVDLFLDFVNIFRELLMILGVNENKKKEKK
SIO_010081: TMBIM6
subclass of: SO_0000673
so part of: TMBIM6
location: complement(join(111782..111805,112307..112379,112504..112604,112714..112793,113369..113472,113855..113897,114034..114154,114784..114892,114966..115021))
location: region:111782-115021:-1
so has part: feature:114966-115021:-1:exon
so has part: feature:114784-114892:-1:exon
so has part: feature:114034-114154:-1:exon
so has part: feature:113855-113897:-1:exon
so has part: feature:113369-113472:-1:exon
so has part: feature:112714-112793:-1:exon
so has part: feature:112504-112604:-1:exon
so has part: feature:112307-112379:-1:exon
so has part: feature:111782-111805:-1:exon

XP_040510747.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114966-115021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114784-114892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114034-114154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113855-113897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113369-113472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112714-112793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:112504-112604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112307-112379:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:111782-111805:-1:exon

LOC107049717
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107049717
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 116807..133404
location: region:116807-133404:1
so has part: feature:116807-133404:1:exon
subclass of: SO_0000010

107049717
type: Gene
SIO_000068: ncbigene

position:116807:1
position: 116807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133404:1
position: 133404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116807-133404:1:exon

LOC107049717
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107049717
product: formin-like protein 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040654933.2
SIO_010081: LOC107049717
subclass of: SO_0000673
so part of: LOC107049717
location: join(116807..116989,119336..119419,119505..119585,120295..120371,121692..121775,121876..122028,123273..123381,124193..124269,125061..125154,125357..125431,125521..125631,125708..125857,126170..126271,126366..126462,126554..126619,126742..126813,127050..127175,127642..127845,128552..128794,129782..129851,129945..130025,130409..130538,130634..130795,131837..131937,132034..132123,132217..132328,132428..132526,133211..133404)
location: region:116807-133404:1
so has part: feature:116807-116989:1:exon
so has part: feature:119336-119419:1:exon
so has part: feature:119505-119585:1:exon
so has part: feature:120295-120371:1:exon
so has part: feature:121692-121775:1:exon
so has part: feature:121876-122028:1:exon
so has part: feature:123273-123381:1:exon
so has part: feature:124193-124269:1:exon
so has part: feature:125061-125154:1:exon
so has part: feature:125357-125431:1:exon
so has part: feature:125521-125631:1:exon
so has part: feature:125708-125857:1:exon
so has part: feature:126170-126271:1:exon
so has part: feature:126366-126462:1:exon
so has part: feature:126554-126619:1:exon
so has part: feature:126742-126813:1:exon
so has part: feature:127050-127175:1:exon
so has part: feature:127642-127845:1:exon
so has part: feature:128552-128794:1:exon
so has part: feature:129782-129851:1:exon
so has part: feature:129945-130025:1:exon
so has part: feature:130409-130538:1:exon
so has part: feature:130634-130795:1:exon
so has part: feature:131837-131937:1:exon
so has part: feature:132034-132123:1:exon
so has part: feature:132217-132328:1:exon
so has part: feature:132428-132526:1:exon
so has part: feature:133211-133404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116807-116989:1:exon

position:116989:1
position: 116989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119336-119419:1:exon

position:119336:1
position: 119336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119419:1
position: 119419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119505-119585:1:exon

position:119505:1
position: 119505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119585:1
position: 119585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:120295-120371:1:exon

position:120295:1
position: 120295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120371:1
position: 120371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:121692-121775:1:exon

position:121692:1
position: 121692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121775:1
position: 121775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:121876-122028:1:exon

position:121876:1
position: 121876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122028:1
position: 122028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:123273-123381:1:exon

position:123273:1
position: 123273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123381:1
position: 123381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:124193-124269:1:exon

position:124193:1
position: 124193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124269:1
position: 124269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:125061-125154:1:exon

position:125061:1
position: 125061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125154:1
position: 125154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:125357-125431:1:exon

position:125357:1
position: 125357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125431:1
position: 125431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:125521-125631:1:exon

position:125521:1
position: 125521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125631:1
position: 125631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:125708-125857:1:exon

position:125708:1
position: 125708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125857:1
position: 125857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:126170-126271:1:exon

position:126170:1
position: 126170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126271:1
position: 126271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:126366-126462:1:exon

position:126366:1
position: 126366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126462:1
position: 126462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:126554-126619:1:exon

position:126554:1
position: 126554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126619:1
position: 126619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:126742-126813:1:exon

position:126742:1
position: 126742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126813:1
position: 126813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:127050-127175:1:exon

position:127050:1
position: 127050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127175:1
position: 127175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:127642-127845:1:exon

position:127642:1
position: 127642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127845:1
position: 127845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:128552-128794:1:exon

position:128552:1
position: 128552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128794:1
position: 128794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:129782-129851:1:exon

position:129782:1
position: 129782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129851:1
position: 129851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:129945-130025:1:exon

position:129945:1
position: 129945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130025:1
position: 130025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:130409-130538:1:exon

position:130409:1
position: 130409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130538:1
position: 130538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:130634-130795:1:exon

position:130634:1
position: 130634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130795:1
position: 130795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:131837-131937:1:exon

position:131837:1
position: 131837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131937:1
position: 131937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:132034-132123:1:exon

position:132034:1
position: 132034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132123:1
position: 132123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:132217-132328:1:exon

position:132217:1
position: 132217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132328:1
position: 132328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:132428-132526:1:exon

position:132428:1
position: 132428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132526:1
position: 132526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:133211-133404:1:exon

position:133211:1
position: 133211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107049717
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107049717
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: formin-like protein 3
translation: MGNVESADGEALPRGPGTGGAPGVGGGLSAGKMPMPEPCELEERFAMVLSSMNLPPDKARLLRQYDNEKKWDLICDQERFQVKSPPHAYIQKLQSFLDPGVTRKKFRRRVQESTKVLRELEISLRTNHIGWVREFLNDANKGLDVLVNYLSFAQCAVMFDFEGPDGAEDGALERLRSWSRSIEDLHPPGTPPAPFGSSWTRSARHGALRAGTLPNRRALKNARMVSRKDDVHLCVMCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILAAFDNFKEVCKEKHRFERLMDYFRNEDSSIDFMVACMQFINIVVHSVEDMNFRVHLQYEFTKLGLEDFLQKSRHTESEKLQVQIQAYLDNVFDVGGLLEDAETKTVALEKVEELEEQLSHLTEKLLDMENESVMRVAELEKQLLQREKELQLVKETYEHTSHQVHTLRRMIKEKDEAFRRRYGSEPLRPPPPPAPSAPIAAPRAPHCQGSAPPLPPHCRGLHHPSPSPWGCRPSRIKKPIKTKFRLPVFNWTALKPNQISGTVFSELDDERVLQDLDLERFEELFKTKAQGPALDLLCPKSKGTQRAAPKVTLLEANRAKNLAITLRKAGRGPEEICRAIHTFDLATLPVDFVECLMRFVPTEAEVKALRQYERERKPLEELSAEDRFMLHFSKVERLPQRMAIMAFLGNFADNLQMLTPVLGKLNAIIAASASVKSSQKLKQMLEIILALGNYMNSSKRGAVYGFKLQSLDLLLDTKSTDRKLTLLHFIALTVREKYPELATFWQELHFVEKAAAVSLENVLLDVKELTRGMELLRRECGLHDSSVLRSFLAGSESKLERLQKDARTAEDAYNAVVRYFGESPKTTPPSVFXPVFARFIHSYKDAEQENETRKKQEEVMREKLLAQEAKKQEKRNKWQQQELIAELRRRQAKEHRPVYEGKDGTIEDIITALKSVPFTARTAKRGSRFFCEPAHHEESGS
SIO_010081: LOC107049717
subclass of: SO_0000673
so part of: LOC107049717
location: join(116843..116989,119336..119419,119505..119585,120295..120371,121692..121775,121876..122028,123273..123381,124193..124269,125061..125154,125357..125431,125521..125631,125708..125857,126170..126271,126366..126462,126554..126619,126742..126813,127050..127175,127642..127845,128552..128794,129782..129851,129945..130025,130409..130538,130634..130795,131837..131937,132034..132123,132217..132328,132428..132520)
location: region:116843-132520:1
so has part: feature:116843-116989:1:exon
so has part: feature:119336-119419:1:exon
so has part: feature:119505-119585:1:exon
so has part: feature:120295-120371:1:exon
so has part: feature:121692-121775:1:exon
so has part: feature:121876-122028:1:exon
so has part: feature:123273-123381:1:exon
so has part: feature:124193-124269:1:exon
so has part: feature:125061-125154:1:exon
so has part: feature:125357-125431:1:exon
so has part: feature:125521-125631:1:exon
so has part: feature:125708-125857:1:exon
so has part: feature:126170-126271:1:exon
so has part: feature:126366-126462:1:exon
so has part: feature:126554-126619:1:exon
so has part: feature:126742-126813:1:exon
so has part: feature:127050-127175:1:exon
so has part: feature:127642-127845:1:exon
so has part: feature:128552-128794:1:exon
so has part: feature:129782-129851:1:exon
so has part: feature:129945-130025:1:exon
so has part: feature:130409-130538:1:exon
so has part: feature:130634-130795:1:exon
so has part: feature:131837-131937:1:exon
so has part: feature:132034-132123:1:exon
so has part: feature:132217-132328:1:exon
so has part: feature:132428-132520:1:exon

XP_040510867.1
type: Protein
SIO_000068: ncbiprotein

position:116843:1
position: 116843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132520:1
position: 132520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116843-116989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119336-119419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119505-119585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120295-120371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121692-121775:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121876-122028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123273-123381:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124193-124269:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125061-125154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125357-125431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:125521-125631:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125708-125857:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:126170-126271:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:126366-126462:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126554-126619:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:126742-126813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:127050-127175:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:127642-127845:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:128552-128794:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:129782-129851:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129945-130025:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:130409-130538:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:130634-130795:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:131837-131937:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:132034-132123:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:132217-132328:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:132428-132520:1:exon

LOC121108098
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121108098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134309..142759
location: region:134309-142759:1
so has part: feature:134309-142759:1:exon
subclass of: SO_0000010

121108098
type: Gene
SIO_000068: ncbigene

position:134309:1
position: 134309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142759:1
position: 142759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134309-142759:1:exon

LOC121108098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121108098
product: formin-like protein 3, transcript variant X1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040654934.1
SIO_010081: LOC121108098
subclass of: SO_0000673
so part of: LOC121108098
location: join(134309..134583,134819..134930,135006..135155,135472..135574,135670..135803,135857..135921,136043..136117,136353..136477,136946..137149,137858..138092,139088..139156,139252..139332,139717..139846,139942..140103,141137..141238,141335..141424,141520..141631,141731..141828,142515..142759)
location: region:134309-142759:1
so has part: feature:134309-134583:1:exon
so has part: feature:134819-134930:1:exon
so has part: feature:135006-135155:1:exon
so has part: feature:135472-135574:1:exon
so has part: feature:135670-135803:1:exon
so has part: feature:135857-135921:1:exon
so has part: feature:136043-136117:1:exon
so has part: feature:136353-136477:1:exon
so has part: feature:136946-137149:1:exon
so has part: feature:137858-138092:1:exon
so has part: feature:139088-139156:1:exon
so has part: feature:139252-139332:1:exon
so has part: feature:139717-139846:1:exon
so has part: feature:139942-140103:1:exon
so has part: feature:141137-141238:1:exon
so has part: feature:141335-141424:1:exon
so has part: feature:141520-141631:1:exon
so has part: feature:141731-141828:1:exon
so has part: feature:142515-142759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134309-134583:1:exon

position:134583:1
position: 134583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134819-134930:1:exon

position:134819:1
position: 134819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134930:1
position: 134930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135006-135155:1:exon

position:135006:1
position: 135006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135155:1
position: 135155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135472-135574:1:exon

position:135472:1
position: 135472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135574:1
position: 135574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135670-135803:1:exon

position:135670:1
position: 135670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135803:1
position: 135803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:135857-135921:1:exon

position:135857:1
position: 135857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135921:1
position: 135921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:136043-136117:1:exon

position:136043:1
position: 136043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136117:1
position: 136117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:136353-136477:1:exon

position:136353:1
position: 136353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136477:1
position: 136477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:136946-137149:1:exon

position:136946:1
position: 136946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137149:1
position: 137149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:137858-138092:1:exon

position:137858:1
position: 137858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138092:1
position: 138092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:139088-139156:1:exon

position:139088:1
position: 139088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139156:1
position: 139156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:139252-139332:1:exon

position:139252:1
position: 139252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139332:1
position: 139332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:139717-139846:1:exon

position:139717:1
position: 139717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139846:1
position: 139846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:139942-140103:1:exon

position:139942:1
position: 139942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140103:1
position: 140103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:141137-141238:1:exon

position:141137:1
position: 141137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141238:1
position: 141238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:141335-141424:1:exon

position:141335:1
position: 141335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141424:1
position: 141424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:141520-141631:1:exon

position:141520:1
position: 141520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141631:1
position: 141631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:141731-141828:1:exon

position:141731:1
position: 141731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141828:1
position: 141828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:142515-142759:1:exon

position:142515:1
position: 142515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121108098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121108098
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:135072..135074,aa:OTHER)
product: LOW QUALITY PROTEIN: formin-like protein 3 isoform X1
translation: MLHPSAVPSSPWEGLAVSCAGGAAGSLLPQQADCSQEEDPKATATQEDEDDDDLGCFATSVSQWAPGGGRVLSSPPLLPPHPPPFFSRERMWWACMQFINIVVHSVEDMNFRVHLQYEFTKLGLEDFLQKSRHTESEKLQVQIQAYLDNVFXCGGLLEDAETKTVALEKVEELEEQLSHLTEKLLDMENESVMRVAELEKQLLQREKELQLVKETYEHTSHQVAHSLRRMIKEKDEAFRRRYGSEPPPGTEPPPPPTDCAPPPPPPPPPPLPPPAPPLPGKCAPPLPPPLPGASPSIALTVGLSAIRIKKPIKTKFRLPVFNWTALKPNQISGTVFSELDDERVLQDLDLERFEELFKTKAQGPALDLLCPKSKGTQRAAAKVTLLEANRAKNLAITLRKAGRGPEEICRAIHTFDLATLPVDFVECLMRFVPTEAEVKALRQYERERKPLEELSAEDRFMLHFSKVERLPQRMAIMAFLGNFADNLQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSSKRGAVYGFKLQSLDLLLDTKSTDRKLTLLHFIALTVREKYPELATFWQELHFVEKAAAVSLENVLLDVKELTRGMELLRRECGLHDSSVLRSFLAGSESKLERLQKDARTAEDAYNAVVRYFGESPKTTPPSVFFPVFARFIHSYKDAEQENETRKKQEEVMREKLLAQEAKKQEKRNKWQQQELIAELRRRQAKEHRPVYEGKDGTIEDIITALKSVPFTARTAKRGSRFFCEPAHHEESGS
SIO_010081: LOC121108098
subclass of: SO_0000673
so part of: LOC121108098
location: join(134309..134583,134819..134930,135006..135155,135472..135574,135670..135803,135857..135921,136043..136117,136353..136477,136946..137149,137858..138092,139088..139156,139252..139332,139717..139846,139942..140103,141137..141238,141335..141424,141520..141631,141731..141822)
location: region:134309-141822:1
so has part: feature:134309-134583:1:exon
so has part: feature:134819-134930:1:exon
so has part: feature:135006-135155:1:exon
so has part: feature:135472-135574:1:exon
so has part: feature:135670-135803:1:exon
so has part: feature:135857-135921:1:exon
so has part: feature:136043-136117:1:exon
so has part: feature:136353-136477:1:exon
so has part: feature:136946-137149:1:exon
so has part: feature:137858-138092:1:exon
so has part: feature:139088-139156:1:exon
so has part: feature:139252-139332:1:exon
so has part: feature:139717-139846:1:exon
so has part: feature:139942-140103:1:exon
so has part: feature:141137-141238:1:exon
so has part: feature:141335-141424:1:exon
so has part: feature:141520-141631:1:exon
so has part: feature:141731-141822:1:exon

XP_040510868.1
type: Protein
SIO_000068: ncbiprotein

position:141822:1
position: 141822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134309-134583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134819-134930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135006-135155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135472-135574:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135670-135803:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135857-135921:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136043-136117:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136353-136477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:136946-137149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137858-138092:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139088-139156:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139252-139332:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:139717-139846:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:139942-140103:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141137-141238:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:141335-141424:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:141520-141631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:141731-141822:1:exon

ATG101
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(144346..147195)
location: region:144346-147195:-1
so has part: feature:144346-147195:-1:exon
subclass of: SO_0000010

100859845
type: Gene
SIO_000068: ncbigene

position:144346:-1
position: 144346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147195:-1
position: 147195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144346-147195:-1:exon

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATG101
product: autophagy related 101, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273514.4
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144346..145021,145742..146027,147149..147195))
location: region:144346-147195:-1
so has part: feature:147149-147195:-1:exon
so has part: feature:145742-146027:-1:exon
so has part: feature:144346-145021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147149-147195:-1:exon

position:147149:-1
position: 147149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146027:-1:exon

position:145742:-1
position: 145742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146027:-1
position: 146027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144346-145021:-1:exon

position:145021:-1
position: 145021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATG101
product: autophagy related 101, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273510.4
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144346..145042,145742..146027,147149..147195))
location: region:144346-147195:-1
so has part: feature:147149-147195:-1:exon
so has part: feature:145742-146027:-1:exon
so has part: feature:144346-145042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147149-147195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144346-145042:-1:exon

position:145042:-1
position: 145042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATG101
product: autophagy related 101, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273513.4
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144346..145021,145742..146030,147149..147195))
location: region:144346-147195:-1
so has part: feature:147149-147195:-1:exon
so has part: feature:145742-146030:-1:exon
so has part: feature:144346-145021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147149-147195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146030:-1:exon

position:146030:-1
position: 146030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144346-145021:-1:exon

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATG101
product: autophagy related 101, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273509.4
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144346..145042,145742..146030,147149..147195))
location: region:144346-147195:-1
so has part: feature:147149-147195:-1:exon
so has part: feature:145742-146030:-1:exon
so has part: feature:144346-145042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147149-147195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144346-145042:-1:exon

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATG101
product: autophagy related 101, transcript variant X8
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273515.4
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144346..145021,145742..146027,147101..147195))
location: region:144346-147195:-1
so has part: feature:147101-147195:-1:exon
so has part: feature:145742-146027:-1:exon
so has part: feature:144346-145021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147101-147195:-1:exon

position:147101:-1
position: 147101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144346-145021:-1:exon

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATG101
product: autophagy related 101, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273512.4
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144346..145042,145742..146027,147101..147195))
location: region:144346-147195:-1
so has part: feature:147101-147195:-1:exon
so has part: feature:145742-146027:-1:exon
so has part: feature:144346-145042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147101-147195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144346-145042:-1:exon

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATG101
product: autophagy related 101, transcript variant X7
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145469.3
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144346..145021,145742..146030,147101..147195))
location: region:144346-147195:-1
so has part: feature:147101-147195:-1:exon
so has part: feature:145742-146030:-1:exon
so has part: feature:144346-145021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147101-147195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144346-145021:-1:exon

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATG101
product: autophagy related 101, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273511.4
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144346..145042,145742..146030,147101..147195))
location: region:144346-147195:-1
so has part: feature:147101-147195:-1:exon
so has part: feature:145742-146030:-1:exon
so has part: feature:144346-145042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147101-147195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144346-145042:-1:exon

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101 isoform X4
translation: MVGAARTSSGPRSRAAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKDALRSSGSDGMGQISLEFYQKKKSRWPFSDECIPWELWTIKVNVVNLANEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKISYQITDTLGTSVTTTMRRLIKDTLAL
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144617..145021,145742..146027,147149..147165))
location: region:144617-147165:-1
so has part: feature:147149-147165:-1:exon
so has part: feature:145742-146027:-1:exon
so has part: feature:144617-145021:-1:exon

XP_015129000.3
type: Protein
SIO_000068: ncbiprotein

position:144617:-1
position: 144617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147165:-1
position: 147165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147149-147165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144617-145021:-1:exon

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101 isoform X2
translation: MVGAARTSSGPRSRAAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKPPPCRPQDALRSSGSDGMGQISLEFYQKKKSRWPFSDECIPWELWTIKVNVVNLANEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKISYQITDTLGTSVTTTMRRLIKDTLAL
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144617..145042,145742..146027,147149..147165))
location: region:144617-147165:-1
so has part: feature:147149-147165:-1:exon
so has part: feature:145742-146027:-1:exon
so has part: feature:144617-145042:-1:exon

XP_015128996.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147149-147165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144617-145042:-1:exon

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101 isoform X3
translation: MVGAARSTSSGPRSRAAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKDALRSSGSDGMGQISLEFYQKKKSRWPFSDECIPWELWTIKVNVVNLANEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKISYQITDTLGTSVTTTMRRLIKDTLAL
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144617..145021,145742..146030,147149..147165))
location: region:144617-147165:-1
so has part: feature:147149-147165:-1:exon
so has part: feature:145742-146030:-1:exon
so has part: feature:144617-145021:-1:exon

XP_015128999.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147149-147165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144617-145021:-1:exon

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101 isoform X1
translation: MVGAARSTSSGPRSRAAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKPPPCRPQDALRSSGSDGMGQISLEFYQKKKSRWPFSDECIPWELWTIKVNVVNLANEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKISYQITDTLGTSVTTTMRRLIKDTLAL
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144617..145042,145742..146030,147149..147165))
location: region:144617-147165:-1
so has part: feature:147149-147165:-1:exon
so has part: feature:145742-146030:-1:exon
so has part: feature:144617-145042:-1:exon

XP_015128995.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147149-147165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144617-145042:-1:exon

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101 isoform X8
translation: MVGAARCVWGCGGGGGEMGLCPTSSGPRSRAAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKDALRSSGSDGMGQISLEFYQKKKSRWPFSDECIPWELWTIKVNVVNLANEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKISYQITDTLGTSVTTTMRRLIKDTLAL
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144617..145021,145742..146027,147101..147165))
location: region:144617-147165:-1
so has part: feature:147101-147165:-1:exon
so has part: feature:145742-146027:-1:exon
so has part: feature:144617-145021:-1:exon

XP_015129001.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147101-147165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144617-145021:-1:exon

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101 isoform X6
translation: MVGAARCVWGCGGGGGEMGLCPTSSGPRSRAAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKPPPCRPQDALRSSGSDGMGQISLEFYQKKKSRWPFSDECIPWELWTIKVNVVNLANEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKISYQITDTLGTSVTTTMRRLIKDTLAL
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144617..145042,145742..146027,147101..147165))
location: region:144617-147165:-1
so has part: feature:147101-147165:-1:exon
so has part: feature:145742-146027:-1:exon
so has part: feature:144617-145042:-1:exon

XP_015128998.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147101-147165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144617-145042:-1:exon

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101 isoform X7
translation: MVGAARCVWGCGGGGGEMGLCPSTSSGPRSRAAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKDALRSSGSDGMGQISLEFYQKKKSRWPFSDECIPWELWTIKVNVVNLANEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKISYQITDTLGTSVTTTMRRLIKDTLAL
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144617..145021,145742..146030,147101..147165))
location: region:144617-147165:-1
so has part: feature:147101-147165:-1:exon
so has part: feature:145742-146030:-1:exon
so has part: feature:144617-145021:-1:exon

XP_025001237.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147101-147165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144617-145021:-1:exon

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101 isoform X5
translation: MVGAARCVWGCGGGGGEMGLCPSTSSGPRSRAAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKPPPCRPQDALRSSGSDGMGQISLEFYQKKKSRWPFSDECIPWELWTIKVNVVNLANEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKISYQITDTLGTSVTTTMRRLIKDTLAL
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(144617..145042,145742..146030,147101..147165))
location: region:144617-147165:-1
so has part: feature:147101-147165:-1:exon
so has part: feature:145742-146030:-1:exon
so has part: feature:144617-145042:-1:exon

XP_015128997.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147101-147165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145742-146030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144617-145042:-1:exon

NR4A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: NR4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(148782..156983)
location: region:148782-156983:-1
so has part: feature:148782-156983:-1:exon
subclass of: SO_0000010

100857380
type: Gene
SIO_000068: ncbigene

position:148782:-1
position: 148782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156983:-1
position: 156983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148782-156983:-1:exon

NR4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: NR4A1
product: nuclear receptor subfamily 4 group A member 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_015273518.4
SIO_010081: NR4A1
subclass of: SO_0000673
so part of: NR4A1
location: complement(join(148782..150254,150935..151113,151768..151970,152892..153043,153127..153256,153812..154576,156911..156983))
location: region:148782-156983:-1
so has part: feature:156911-156983:-1:exon
so has part: feature:153812-154576:-1:exon
so has part: feature:153127-153256:-1:exon
so has part: feature:152892-153043:-1:exon
so has part: feature:151768-151970:-1:exon
so has part: feature:150935-151113:-1:exon
so has part: feature:148782-150254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156911-156983:-1:exon

position:156911:-1
position: 156911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153812-154576:-1:exon

position:153812:-1
position: 153812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154576:-1
position: 154576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153127-153256:-1:exon

position:153127:-1
position: 153127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153256:-1
position: 153256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152892-153043:-1:exon

position:152892:-1
position: 152892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153043:-1
position: 153043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151768-151970:-1:exon

position:151768:-1
position: 151768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151970:-1
position: 151970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150935-151113:-1:exon

position:150935:-1
position: 150935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151113:-1
position: 151113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:148782-150254:-1:exon

position:150254:-1
position: 150254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: NR4A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nuclear receptor subfamily 4 group A member 1
translation: MPCIQAQYGTATSGPCERCPSELLSPEGGRYPMEVPGADPTAAPALPSFSTFMESYAGELDAFLCQLPAGGQHAAFRLEELQVYGCYPAAFGQHEETLSSSSSSSSSSSGGSDCYGSPCSIPSPNFPAPQAPGWDGSFGPYSPHYDGGRQWGEAVKGGSAQPPLLLRAPQPRRFPEGPPPDGRGPLRSAPRTRGGFSWVTPHPHVAVAEGPPLPPAPKTRGPGAAEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPISLITSLVRAHIDSVPSATKLDYSKFQDSVPCHLEKEDSVDVQQFYDLLTGSMDVIRKWAEKIQGFSELPREDQDLLLESAFLELFILRLAYRSKPEEGKLIFCNGVVLHRLQCVRGFGEWIDAILEFSHSLHRMSVDVPSFSCLAALVIITDRHGLKEPKRVEELQNRIVGCLKDHVAAGEPGRPGCLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVDKIFMDTLPF
SIO_010081: NR4A1
subclass of: SO_0000673
so part of: NR4A1
location: complement(join(150004..150254,150935..151113,151768..151970,152892..153043,153127..153256,153812..154574))
location: region:150004-154574:-1
so has part: feature:153812-154574:-1:exon
so has part: feature:153127-153256:-1:exon
so has part: feature:152892-153043:-1:exon
so has part: feature:151768-151970:-1:exon
so has part: feature:150935-151113:-1:exon
so has part: feature:150004-150254:-1:exon

XP_015129004.4
type: Protein
SIO_000068: ncbiprotein

position:150004:-1
position: 150004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154574:-1
position: 154574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153812-154574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153127-153256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152892-153043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151768-151970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150935-151113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150004-150254:-1:exon

GRASP
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: GRASP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(160052..165240)
location: region:160052-165240:-1
so has part: feature:160052-165240:-1:exon
subclass of: SO_0000010

107055398
type: Gene
SIO_000068: ncbigene

position:160052:-1
position: 160052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165240:-1
position: 165240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160052-165240:-1:exon

GRASP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: GRASP
product: general receptor for phosphoinositides 1 associated scaffold protein
experiment: COORDINATES: cap analysis [ECO:0007248]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_015300270.4
SIO_010081: GRASP
subclass of: SO_0000673
so part of: GRASP
location: complement(join(160052..160474,161121..161187,161401..161467,161562..161655,161727..161829,162759..162813,163179..163228,165060..165240))
location: region:160052-165240:-1
so has part: feature:165060-165240:-1:exon
so has part: feature:163179-163228:-1:exon
so has part: feature:162759-162813:-1:exon
so has part: feature:161727-161829:-1:exon
so has part: feature:161562-161655:-1:exon
so has part: feature:161401-161467:-1:exon
so has part: feature:161121-161187:-1:exon
so has part: feature:160052-160474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165060-165240:-1:exon

position:165060:-1
position: 165060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163179-163228:-1:exon

position:163179:-1
position: 163179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163228:-1
position: 163228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162759-162813:-1:exon

position:162759:-1
position: 162759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162813:-1
position: 162813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161727-161829:-1:exon

position:161727:-1
position: 161727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161829:-1
position: 161829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:161562-161655:-1:exon

position:161562:-1
position: 161562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161655:-1
position: 161655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161401-161467:-1:exon

position:161401:-1
position: 161401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161467:-1
position: 161467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:161121-161187:-1:exon

position:161121:-1
position: 161121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161187:-1
position: 161187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:160052-160474:-1:exon

position:160474:-1
position: 160474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRASP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: GRASP
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein TAMALIN
translation: MTLRRRQRLRPKEGDGAAPDRCAADADPDPGPGPVPDPGPTDVYRTLAASGGTLPRVRKDMGFTWPSPSGSPEEHRRVVTLQKGAEETFGFEIQTYGLHHAEHRRVQMFTFVSRVHGGSAAEAAGLQRGDTITGVNGQNVEGTRHRDIVDIIRSAGDMLRLETLYGTSVRRAELEARLQYLKQTLYEKWGEFRSLMVQEQRLVRGVVAKDPSIYATLESLRGWGGPSSPHASSDDSLYQTCVFTDGVGDNDGDGGDRGGATPAPPPPRPRPPLTRSVSLKCGSGAGAAGPTWGGGRFGDPGVVLRGGDGAAAPPPEGRHSSFRRRLLKFIPGLNRALEEEESQL
SIO_010081: GRASP
subclass of: SO_0000673
so part of: GRASP
location: complement(join(160052..160474,161121..161187,161401..161467,161562..161655,161727..161829,162759..162813,163179..163228,165060..165236))
location: region:160052-165236:-1
so has part: feature:165060-165236:-1:exon
so has part: feature:163179-163228:-1:exon
so has part: feature:162759-162813:-1:exon
so has part: feature:161727-161829:-1:exon
so has part: feature:161562-161655:-1:exon
so has part: feature:161401-161467:-1:exon
so has part: feature:161121-161187:-1:exon
so has part: feature:160052-160474:-1:exon

XP_015155756.3
type: Protein
SIO_000068: ncbiprotein

position:165236:-1
position: 165236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165060-165236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163179-163228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162759-162813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161727-161829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161562-161655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161401-161467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161121-161187:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:160052-160474:-1:exon

ACVR1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ACVR1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(166108..183505)
location: region:166108-183505:-1
so has part: feature:166108-183505:-1:exon
subclass of: SO_0000010

768878
type: Gene
SIO_000068: ncbigene

position:166108:-1
position: 166108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183505:-1
position: 183505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166108-183505:-1:exon

ACVR1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ACVR1B
product: activin A receptor type 1B, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300266.4
SIO_010081: ACVR1B
subclass of: SO_0000673
so part of: ACVR1B
location: complement(join(166108..169592,169707..169837,170355..170479,170862..171018,171503..171670,171997..172227,174033..174281,175447..175686,183322..183505))
location: region:166108-183505:-1
so has part: feature:183322-183505:-1:exon
so has part: feature:175447-175686:-1:exon
so has part: feature:174033-174281:-1:exon
so has part: feature:171997-172227:-1:exon
so has part: feature:171503-171670:-1:exon
so has part: feature:170862-171018:-1:exon
so has part: feature:170355-170479:-1:exon
so has part: feature:169707-169837:-1:exon
so has part: feature:166108-169592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183322-183505:-1:exon

position:183322:-1
position: 183322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175447-175686:-1:exon

position:175447:-1
position: 175447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175686:-1
position: 175686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174033-174281:-1:exon

position:174033:-1
position: 174033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174281:-1
position: 174281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171997-172227:-1:exon

position:171997:-1
position: 171997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172227:-1
position: 172227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171503-171670:-1:exon

position:171503:-1
position: 171503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171670:-1
position: 171670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170862-171018:-1:exon

position:170862:-1
position: 170862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171018:-1
position: 171018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:170355-170479:-1:exon

position:170355:-1
position: 170355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170479:-1
position: 170479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169707-169837:-1:exon

position:169707:-1
position: 169707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169837:-1
position: 169837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:166108-169592:-1:exon

position:169592:-1
position: 169592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACVR1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ACVR1B
product: activin A receptor type 1B, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904970.1
SIO_010081: ACVR1B
subclass of: SO_0000673
so part of: ACVR1B
location: complement(join(166108..169592,169707..169837,170355..170479,170862..171018,171503..171670,171997..172227,174033..174281,175447..175686,180912..181718))
location: region:166108-181718:-1
so has part: feature:180912-181718:-1:exon
so has part: feature:175447-175686:-1:exon
so has part: feature:174033-174281:-1:exon
so has part: feature:171997-172227:-1:exon
so has part: feature:171503-171670:-1:exon
so has part: feature:170862-171018:-1:exon
so has part: feature:170355-170479:-1:exon
so has part: feature:169707-169837:-1:exon
so has part: feature:166108-169592:-1:exon

position:181718:-1
position: 181718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180912-181718:-1:exon

position:180912:-1
position: 180912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175447-175686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174033-174281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171997-172227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171503-171670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170862-171018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170355-170479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169707-169837:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166108-169592:-1:exon

ACVR1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ACVR1B
product: activin A receptor type 1B, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300267.4
SIO_010081: ACVR1B
subclass of: SO_0000673
so part of: ACVR1B
location: complement(join(166108..169592,169707..169837,170355..170479,170862..171018,171503..171670,171997..172227,174033..174281,175447..175686,175794..181011))
location: region:166108-181011:-1
so has part: feature:175794-181011:-1:exon
so has part: feature:175447-175686:-1:exon
so has part: feature:174033-174281:-1:exon
so has part: feature:171997-172227:-1:exon
so has part: feature:171503-171670:-1:exon
so has part: feature:170862-171018:-1:exon
so has part: feature:170355-170479:-1:exon
so has part: feature:169707-169837:-1:exon
so has part: feature:166108-169592:-1:exon

position:181011:-1
position: 181011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175794-181011:-1:exon

position:175794:-1
position: 175794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175447-175686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174033-174281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171997-172227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171503-171670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170862-171018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170355-170479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169707-169837:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166108-169592:-1:exon

ACVR1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ACVR1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activin receptor type-1B isoform X1
translation: MAAPRRRPPPSAASAASTAAVLPLLALLMAGAPGGARALTCLCSDCKQANSTCETDGACMVSVFNLDGVKHHVRTCIPEAKLIPAGKPFYCLSSEDLRNTHCCYSDFCNKIDLMVPSGHLKDNEPPSSWGPVELVAVIAGPVFLVFVVVIIVVFVFHHHQRVYHNRQRLDMEDPSCEMCLSKDKTLQDLVYDLSTSGSGSGLPLFVQRTVARTIVLQEIIGKGRFGEVWRGRWRGGDVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTIEGMIKLALSAASGLAHLHMEIVGTQGKPGIAHRDLKSKNILVKKNGTCAIADLGLAVRHDSVTDTIDIAPNQRVGTKRYMAPEVLDETINMKHFDSFKCADIYALGLVYWEIARRCNAGGIHEEYQLPYYDLVPSDPSIEEMRKVVCDQKLRPNIPNWWQSYEALRVMGKMMRECWYANGAARLTALRIKKTLSQLSVQEDVKI
SIO_010081: ACVR1B
subclass of: SO_0000673
so part of: ACVR1B
location: complement(join(169467..169592,169707..169837,170355..170479,170862..171018,171503..171670,171997..172227,174033..174281,175447..175686,183322..183433))
location: region:169467-183433:-1
so has part: feature:183322-183433:-1:exon
so has part: feature:175447-175686:-1:exon
so has part: feature:174033-174281:-1:exon
so has part: feature:171997-172227:-1:exon
so has part: feature:171503-171670:-1:exon
so has part: feature:170862-171018:-1:exon
so has part: feature:170355-170479:-1:exon
so has part: feature:169707-169837:-1:exon
so has part: feature:169467-169592:-1:exon

XP_015155752.2
type: Protein
SIO_000068: ncbiprotein

position:169467:-1
position: 169467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183433:-1
position: 183433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183322-183433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175447-175686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174033-174281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171997-172227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171503-171670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170862-171018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170355-170479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169707-169837:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169467-169592:-1:exon

ACVR1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ACVR1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activin receptor type-1B isoform X2
translation: MVSVFNLDGVKHHVRTCIPEAKLIPAGKPFYCLSSEDLRNTHCCYSDFCNKIDLMVPSGHLKDNEPPSSWGPVELVAVIAGPVFLVFVVVIIVVFVFHHHQRVYHNRQRLDMEDPSCEMCLSKDKTLQDLVYDLSTSGSGSGLPLFVQRTVARTIVLQEIIGKGRFGEVWRGRWRGGDVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTIEGMIKLALSAASGLAHLHMEIVGTQGKPGIAHRDLKSKNILVKKNGTCAIADLGLAVRHDSVTDTIDIAPNQRVGTKRYMAPEVLDETINMKHFDSFKCADIYALGLVYWEIARRCNAGGIHEEYQLPYYDLVPSDPSIEEMRKVVCDQKLRPNIPNWWQSYEALRVMGKMMRECWYANGAARLTALRIKKTLSQLSVQEDVKI
SIO_010081: ACVR1B
subclass of: SO_0000673
so part of: ACVR1B
location: complement(join(169467..169592,169707..169837,170355..170479,170862..171018,171503..171670,171997..172227,174033..174281,175447..175621))
location: region:169467-175621:-1
so has part: feature:175447-175621:-1:exon
so has part: feature:174033-174281:-1:exon
so has part: feature:171997-172227:-1:exon
so has part: feature:171503-171670:-1:exon
so has part: feature:170862-171018:-1:exon
so has part: feature:170355-170479:-1:exon
so has part: feature:169707-169837:-1:exon
so has part: feature:169467-169592:-1:exon

XP_015155753.2
type: Protein
SIO_000068: ncbiprotein

position:175621:-1
position: 175621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175447-175621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174033-174281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171997-172227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171503-171670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170862-171018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170355-170479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169707-169837:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169467-169592:-1:exon

ACVR1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ACVR1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activin receptor type-1B isoform X2
translation: MVSVFNLDGVKHHVRTCIPEAKLIPAGKPFYCLSSEDLRNTHCCYSDFCNKIDLMVPSGHLKDNEPPSSWGPVELVAVIAGPVFLVFVVVIIVVFVFHHHQRVYHNRQRLDMEDPSCEMCLSKDKTLQDLVYDLSTSGSGSGLPLFVQRTVARTIVLQEIIGKGRFGEVWRGRWRGGDVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTIEGMIKLALSAASGLAHLHMEIVGTQGKPGIAHRDLKSKNILVKKNGTCAIADLGLAVRHDSVTDTIDIAPNQRVGTKRYMAPEVLDETINMKHFDSFKCADIYALGLVYWEIARRCNAGGIHEEYQLPYYDLVPSDPSIEEMRKVVCDQKLRPNIPNWWQSYEALRVMGKMMRECWYANGAARLTALRIKKTLSQLSVQEDVKI
SIO_010081: ACVR1B
subclass of: SO_0000673
so part of: ACVR1B
location: complement(join(169467..169592,169707..169837,170355..170479,170862..171018,171503..171670,171997..172227,174033..174281,175447..175621))
location: region:169467-175621:-1
so has part: feature:175447-175621:-1:exon
so has part: feature:174033-174281:-1:exon
so has part: feature:171997-172227:-1:exon
so has part: feature:171503-171670:-1:exon
so has part: feature:170862-171018:-1:exon
so has part: feature:170355-170479:-1:exon
so has part: feature:169707-169837:-1:exon
so has part: feature:169467-169592:-1:exon

XP_046760926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175447-175621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174033-174281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171997-172227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171503-171670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170862-171018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170355-170479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169707-169837:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169467-169592:-1:exon

ACVRL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ACVRL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(184067..192413)
location: region:184067-192413:-1
so has part: feature:184067-192413:-1:exon
subclass of: SO_0000010

100857446
type: Gene
SIO_000068: ncbigene

position:184067:-1
position: 184067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192413:-1
position: 192413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184067-192413:-1:exon

ACVRL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ACVRL1
product: activin A receptor like type 1, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300268.4
SIO_010081: ACVRL1
subclass of: SO_0000673
so part of: ACVRL1
location: complement(join(184067..184402,185231..185361,186513..186710,187396..187671,187821..187967,188289..188388,188473..188690,189127..189351,190401..190471,192181..192413))
location: region:184067-192413:-1
so has part: feature:192181-192413:-1:exon
so has part: feature:190401-190471:-1:exon
so has part: feature:189127-189351:-1:exon
so has part: feature:188473-188690:-1:exon
so has part: feature:188289-188388:-1:exon
so has part: feature:187821-187967:-1:exon
so has part: feature:187396-187671:-1:exon
so has part: feature:186513-186710:-1:exon
so has part: feature:185231-185361:-1:exon
so has part: feature:184067-184402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192181-192413:-1:exon

position:192181:-1
position: 192181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190401-190471:-1:exon

position:190401:-1
position: 190401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190471:-1
position: 190471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189127-189351:-1:exon

position:189127:-1
position: 189127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189351:-1
position: 189351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188473-188690:-1:exon

position:188473:-1
position: 188473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188690:-1
position: 188690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:188289-188388:-1:exon

position:188289:-1
position: 188289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188388:-1
position: 188388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:187821-187967:-1:exon

position:187821:-1
position: 187821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187967:-1
position: 187967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:187396-187671:-1:exon

position:187396:-1
position: 187396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187671:-1
position: 187671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:186513-186710:-1:exon

position:186513:-1
position: 186513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186710:-1
position: 186710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:185231-185361:-1:exon

position:185231:-1
position: 185231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185361:-1
position: 185361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:184067-184402:-1:exon

position:184402:-1
position: 184402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACVRL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ACVRL1
product: activin A receptor like type 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904969.1
SIO_010081: ACVRL1
subclass of: SO_0000673
so part of: ACVRL1
location: complement(join(184067..184402,185231..185361,186513..186710,187396..187671,187821..187967,188289..188388,188473..188690,189127..189351,190401..190471,191591..192069))
location: region:184067-192069:-1
so has part: feature:191591-192069:-1:exon
so has part: feature:190401-190471:-1:exon
so has part: feature:189127-189351:-1:exon
so has part: feature:188473-188690:-1:exon
so has part: feature:188289-188388:-1:exon
so has part: feature:187821-187967:-1:exon
so has part: feature:187396-187671:-1:exon
so has part: feature:186513-186710:-1:exon
so has part: feature:185231-185361:-1:exon
so has part: feature:184067-184402:-1:exon

position:192069:-1
position: 192069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191591-192069:-1:exon

position:191591:-1
position: 191591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190401-190471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189127-189351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188473-188690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188289-188388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187821-187967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187396-187671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186513-186710:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185231-185361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184067-184402:-1:exon

ACVRL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ACVRL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase receptor R3 isoform X1
translation: MGVHGEVCKRKMPPRAHGGAVLVLLSLSLGLAADELQCACDMPHCPAPTCTGKVCFVSKRREAGKVTQHKGCFSDHLLENCRPYVMEHFGTRCCNASMCNAELEIYLRGEEALGESPSLSNLLLLIFIPLLTLLVLAALTILFFWKLAQHRRKRLLLFKHSDLGDTDLMLKASMVGDSTLEDLLNDDCTTGSGSGLPFLVQRTVARQISLVECVGKGRYGEVWRGVWHGENVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHENGSLYDYLQRTTLDVETCLGLAASIICGLVHLHVEIFGTQGKPAIAHRDLKSRNILVKSNRQCCIADLGLAVMHSQGSDYLDIGHNPRVGTKRYMAPEVLSEQIRTDCFESYKKTDIWAYGLVLWEITRRTAVNGIVEEYRPPFFDAVPSDPSFEDMKKVVCVEQRTPAVPNRLFSDPALRALPGLMKECWYQSPAARLTALRIKKSLQKLQHSLHDPKEER
SIO_010081: ACVRL1
subclass of: SO_0000673
so part of: ACVRL1
location: complement(join(184268..184402,185231..185361,186513..186710,187396..187671,187821..187967,188289..188388,188473..188690,189127..189351,190401..190471,191591..191619))
location: region:184268-191619:-1
so has part: feature:191591-191619:-1:exon
so has part: feature:190401-190471:-1:exon
so has part: feature:189127-189351:-1:exon
so has part: feature:188473-188690:-1:exon
so has part: feature:188289-188388:-1:exon
so has part: feature:187821-187967:-1:exon
so has part: feature:187396-187671:-1:exon
so has part: feature:186513-186710:-1:exon
so has part: feature:185231-185361:-1:exon
so has part: feature:184268-184402:-1:exon

XP_046760925.1
type: Protein
SIO_000068: ncbiprotein

position:184268:-1
position: 184268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191619:-1
position: 191619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191591-191619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190401-190471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189127-189351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188473-188690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188289-188388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187821-187967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187396-187671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186513-186710:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185231-185361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184268-184402:-1:exon

ACVRL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ACVRL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase receptor R3 isoform X2
translation: MPPRAHGGAVLVLLSLSLGLAADELQCACDMPHCPAPTCTGKVCFVSKRREAGKVTQHKGCFSDHLLENCRPYVMEHFGTRCCNASMCNAELEIYLRGEEALGESPSLSNLLLLIFIPLLTLLVLAALTILFFWKLAQHRRKRLLLFKHSDLGDTDLMLKASMVGDSTLEDLLNDDCTTGSGSGLPFLVQRTVARQISLVECVGKGRYGEVWRGVWHGENVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHENGSLYDYLQRTTLDVETCLGLAASIICGLVHLHVEIFGTQGKPAIAHRDLKSRNILVKSNRQCCIADLGLAVMHSQGSDYLDIGHNPRVGTKRYMAPEVLSEQIRTDCFESYKKTDIWAYGLVLWEITRRTAVNGIVEEYRPPFFDAVPSDPSFEDMKKVVCVEQRTPAVPNRLFSDPALRALPGLMKECWYQSPAARLTALRIKKSLQKLQHSLHDPKEER
SIO_010081: ACVRL1
subclass of: SO_0000673
so part of: ACVRL1
location: complement(join(184268..184402,185231..185361,186513..186710,187396..187671,187821..187967,188289..188388,188473..188690,189127..189351,190401..190467))
location: region:184268-190467:-1
so has part: feature:190401-190467:-1:exon
so has part: feature:189127-189351:-1:exon
so has part: feature:188473-188690:-1:exon
so has part: feature:188289-188388:-1:exon
so has part: feature:187821-187967:-1:exon
so has part: feature:187396-187671:-1:exon
so has part: feature:186513-186710:-1:exon
so has part: feature:185231-185361:-1:exon
so has part: feature:184268-184402:-1:exon

XP_015155754.2
type: Protein
SIO_000068: ncbiprotein

position:190467:-1
position: 190467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190401-190467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189127-189351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188473-188690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188289-188388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187821-187967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187396-187671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186513-186710:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185231-185361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184268-184402:-1:exon

ANKRD33
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ANKRD33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(194346..196467)
location: region:194346-196467:-1
so has part: feature:194346-196467:-1:exon
subclass of: SO_0000010

430112
type: Gene
SIO_000068: ncbigene

position:194346:-1
position: 194346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196467:-1
position: 196467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194346-196467:-1:exon

ANKRD33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ANKRD33
product: ankyrin repeat domain 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040654815.1
SIO_010081: ANKRD33
subclass of: SO_0000673
so part of: ANKRD33
location: complement(join(194346..195257,195858..195998,196106..196467))
location: region:194346-196467:-1
so has part: feature:196106-196467:-1:exon
so has part: feature:195858-195998:-1:exon
so has part: feature:194346-195257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196106-196467:-1:exon

position:196106:-1
position: 196106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195858-195998:-1:exon

position:195858:-1
position: 195858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195998:-1
position: 195998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194346-195257:-1:exon

position:195257:-1
position: 195257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ANKRD33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: photoreceptor ankyrin repeat protein
translation: MGQNLPTLGFGVGGGGPERSAAPKQNGLMVACCQGFVDIVPLLQHCPYVDVNQQDKEGNTALMMAAQAGHITIVNYLLNYFPALDVERRDARGLTALMKAAVQGRHDCVTALLLAGADLHAVDPIKGKTARDWAAFTGRFETTVRIRTLLRRPRAEQFGTHYLPEWPALAGLVAKALSPKSRSQRLLEKIHSLFTFRIPRDPEEDGVLDHMVRMTTSLASPFVTTACRTVCPDSPPEVGKRRLSVAEILQEHVPEPGTGMASCNGQLEGHGQQVGNGQVALDQAVVQMAPRRHRLLGFLPRLLRANCIFPGERVPRIKLSKAGSPPACRRERRPRGRDKALLQPPKWRYKELKEEKRAAEEAEGEKKRKKGKKGC
SIO_010081: ANKRD33
subclass of: SO_0000673
so part of: ANKRD33
location: complement(join(194476..195257,195858..195998,196106..196310))
location: region:194476-196310:-1
so has part: feature:196106-196310:-1:exon
so has part: feature:195858-195998:-1:exon
so has part: feature:194476-195257:-1:exon

XP_040510749.1
type: Protein
SIO_000068: ncbiprotein

position:194476:-1
position: 194476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196310:-1
position: 196310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196106-196310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195858-195998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194476-195257:-1:exon

LOC121106464
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121106464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(205145..211241)
location: region:205145-211241:-1
so has part: feature:205145-211241:-1:exon
subclass of: SO_0000011

121106464
type: Gene
SIO_000068: ncbigene

position:205145:-1
position: 205145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211241:-1
position: 211241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205145-211241:-1:exon

LOC121106464
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121106464
product: uncharacterized LOC121106464, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_005842383.2
SIO_010081: LOC121106464
subclass of: SO_0000673
so part of: LOC121106464
location: complement(join(205145..206083,206477..206654,211142..211241))
location: region:205145-211241:-1
so has part: feature:211142-211241:-1:exon
so has part: feature:206477-206654:-1:exon
so has part: feature:205145-206083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211142-211241:-1:exon

position:211142:-1
position: 211142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206477-206654:-1:exon

position:206477:-1
position: 206477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206654:-1
position: 206654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205145-206083:-1:exon

position:206083:-1
position: 206083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121106464
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121106464
product: uncharacterized LOC121106464, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_003072621.3
SIO_010081: LOC121106464
subclass of: SO_0000673
so part of: LOC121106464
location: complement(join(205145..206083,206477..206735))
location: region:205145-206735:-1
so has part: feature:206477-206735:-1:exon
so has part: feature:205145-206083:-1:exon

position:206735:-1
position: 206735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206477-206735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205145-206083:-1:exon

FIGNL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 215518..234388
location: region:215518-234388:1
so has part: feature:215518-234388:1:exon
subclass of: SO_0000010

431296
type: Gene
SIO_000068: ncbigene

position:215518:1
position: 215518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234388:1
position: 234388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215518-234388:1:exon

FIGNL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: FIGNL2
product: fidgetin like 2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300264.4
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: join(215518..215680,228275..234388)
location: region:215518-234388:1
so has part: feature:215518-215680:1:exon
so has part: feature:228275-234388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215518-215680:1:exon

position:215680:1
position: 215680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228275-234388:1:exon

position:228275:1
position: 228275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FIGNL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fidgetin-like protein 2
translation: MHWSPEHAQSLNQWPEQHLDVSSTTSSPAHKSDLYPSTRQRFNYAWANDDISALTASNLLKRYAEKYSGVLDAPYERPALSGYGDGAFGPVNGQKGDGEPWPVPHSSDGTYPLTPIHDGLPGAKAVVPPAVPAGSAPLGLTGSPVVSANLTDPIYAGNSCGGAAGSGGLGSSQEYPAGYGSTYLPSGYCGQPSTALAPPHPPALHSSGLLQPTHPSSALVPGYGSSGPVYNYASGSYATQPGYGAIHPPHPSASYLPSGIAAPTPLPAPGPTTRPSVVPAYGYQAAGLASLAVPPLGTEATGTLKRKAFDISGGEDEAEGRYRKYSYEQPKSPYPMSDNGECRGNGFPSASKRPAGSAEEHSSKYGGQAMKSVVSPPYGAGEAPLRPTESFEKFSPPLANGERAAEPGHPFPLRLPPKAPVFSSQPVEEQPKNVDPLVLELVNTKIVERGPPVQWTDIAGQVSIKAAIEEELVWPILRPGAYTGASRLPRTILLFGPRGTGKTLLSRCISTQLGSTLLKLSATALLTTWKAEAEKILQTVFFVAKCRQPSVVLIMEVESLLVAQDGSQAGNLKSQLLSYLDNVATSAEQNVVIIGTTSRPGSMDEASHRRFAKRFYISPPDSIARRQILHHALAQQSSCLSEREMASLVQHTESFSGSELIQLCQHAGATTLHGLPGQIQPTSYKDFEKAFCKVRPAASQKELDLFAEWDKMYGSRH
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: 228286..230439
location: region:228286-230439:1
so has part: feature:228286-230439:1:exon

XP_015155750.2
type: Protein
SIO_000068: ncbiprotein

position:228286:1
position: 228286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230439:1
position: 230439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228286-230439:1:exon

TMDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: TMDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 233628..234388
location: region:233628-234388:1
so has part: feature:233628-234388:1:exon
subclass of: SO_0000010

121106504
type: Gene
SIO_000068: ncbigene

position:233628:1
position: 233628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233628-234388:1:exon

TMDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: TMDD1
product: transmembrane and death domain 1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654816.2
SIO_010081: TMDD1
subclass of: SO_0000673
so part of: TMDD1
location: 233628..234388
location: region:233628-234388:1
so has part: feature:233628-234388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233628-234388:1:exon

TMDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: TMDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and death domain protein 1
translation: MAMGTGVMLAPAGLVLLLMAVGGHCEDTVAANVGRHTMARIAALLSPSECRQLQEQLMGPSKDTRGPEQNPKDGSHPRIPRQRPGCSEALRRWLETEGEVTSWDQLVRSLRRIGRPDIARELGKNLNQDRSLELRRNVEEYGRSVQHLTSSLLLQGEQHGMARSRRGAGDMGDLRFERRPPPPYTRSLLGWVGPVLLGILGGFIASILVAVITVFSCHWALSSVTS
SIO_010081: TMDD1
subclass of: SO_0000673
so part of: TMDD1
location: 233631..234311
location: region:233631-234311:1
so has part: feature:233631-234311:1:exon

XP_040510750.2
type: Protein
SIO_000068: ncbiprotein

position:233631:1
position: 233631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234311:1
position: 234311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233631-234311:1:exon

SCN8A
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(237020..288841)
location: region:237020-288841:-1
so has part: feature:237020-288841:-1:exon
subclass of: SO_0000010

426869
type: Gene
SIO_000068: ncbigene

position:237020:-1
position: 237020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288841:-1
position: 288841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237020-288841:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654817.2
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(237020..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268871..268962,270936..271064,271273..271362,272580..272698,279484..279813,288535..288841))
location: region:237020-288841:-1
so has part: feature:288535-288841:-1:exon
so has part: feature:279484-279813:-1:exon
so has part: feature:272580-272698:-1:exon
so has part: feature:271273-271362:-1:exon
so has part: feature:270936-271064:-1:exon
so has part: feature:268871-268962:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:237020-241734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288535-288841:-1:exon

position:288535:-1
position: 288535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279484-279813:-1:exon

position:279484:-1
position: 279484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279813:-1
position: 279813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272580-272698:-1:exon

position:272580:-1
position: 272580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272698:-1
position: 272698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:271273-271362:-1:exon

position:271273:-1
position: 271273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271362:-1
position: 271362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270936-271064:-1:exon

position:270936:-1
position: 270936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271064:-1
position: 271064
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:268871-268962:-1:exon

position:268871:-1
position: 268871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268962:-1
position: 268962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264436-264657:-1:exon

position:264436:-1
position: 264436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264657:-1
position: 264657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:263951-264014:-1:exon

position:263951:-1
position: 263951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264014:-1
position: 264014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:263382-263523:-1:exon

position:263382:-1
position: 263382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263523:-1
position: 263523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:262714-262920:-1:exon

position:262714:-1
position: 262714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262920:-1
position: 262920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:262236-262523:-1:exon

position:262236:-1
position: 262236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262523:-1
position: 262523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:261124-261483:-1:exon

position:261124:-1
position: 261124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261483:-1
position: 261483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:259153-259288:-1:exon

position:259153:-1
position: 259153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259288:-1
position: 259288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:257244-257482:-1:exon

position:257244:-1
position: 257244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257482:-1
position: 257482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:256523-256696:-1:exon

position:256523:-1
position: 256523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256696:-1
position: 256696
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:255590-255946:-1:exon

position:255590:-1
position: 255590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255946:-1
position: 255946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:254407-254877:-1:exon

position:254407:-1
position: 254407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254877:-1
position: 254877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:253883-254000:-1:exon

position:253883:-1
position: 253883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254000:-1
position: 254000
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:253052-253206:-1:exon

position:253052:-1
position: 253052
reference: sequence
type: ReverseStrandPosition
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position:253206:-1
position: 253206
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:252476-252649:-1:exon

position:252476:-1
position: 252476
reference: sequence
type: ReverseStrandPosition
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position:252649:-1
position: 252649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:248311-248433:-1:exon

position:248311:-1
position: 248311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248433:-1
position: 248433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:244739-245023:-1:exon

position:244739:-1
position: 244739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245023:-1
position: 245023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:244258-244311:-1:exon

position:244258:-1
position: 244258
reference: sequence
type: ReverseStrandPosition
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position:244311:-1
position: 244311
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:243796-243933:-1:exon

position:243796:-1
position: 243796
reference: sequence
type: ReverseStrandPosition
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position:243933:-1
position: 243933
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:243049-243153:-1:exon

position:243049:-1
position: 243049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243153:-1
position: 243153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:242232-242502:-1:exon

position:242232:-1
position: 242232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242502:-1
position: 242502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:237020-241734:-1:exon

position:241734:-1
position: 241734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_003643112.6
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(237020..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268583..268674,270936..271064,271273..271362,272580..272698,279484..279813,288224..288337))
location: region:237020-288337:-1
so has part: feature:288224-288337:-1:exon
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so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
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so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:237020-241734:-1:exon

position:288337:-1
position: 288337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288224-288337:-1:exon

position:288224:-1
position: 288224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279484-279813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272580-272698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271273-271362:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268583-268674:-1:exon

position:268583:-1
position: 268583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268674:-1
position: 268674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:237020-241734:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_424477.7
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(237020..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268871..268962,270936..271064,271273..271362,272580..272698,279484..279813,288224..288337))
location: region:237020-288337:-1
so has part: feature:288224-288337:-1:exon
so has part: feature:279484-279813:-1:exon
so has part: feature:272580-272698:-1:exon
so has part: feature:271273-271362:-1:exon
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so has part: feature:268871-268962:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:237020-241734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288224-288337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279484-279813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272580-272698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271273-271362:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:237020-241734:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300257.4
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(237020..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268871..268962,270936..271064,271273..271362,272580..272698,279484..279813,287001..287157))
location: region:237020-287157:-1
so has part: feature:287001-287157:-1:exon
so has part: feature:279484-279813:-1:exon
so has part: feature:272580-272698:-1:exon
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so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
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so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
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so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:237020-241734:-1:exon

position:287157:-1
position: 287157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287001-287157:-1:exon

position:287001:-1
position: 287001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279484-279813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272580-272698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271273-271362:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:237020-241734:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654819.2
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(237020..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268583..268674,268871..268962,270936..271064,279484..279700))
location: region:237020-279700:-1
so has part: feature:279484-279700:-1:exon
so has part: feature:270936-271064:-1:exon
so has part: feature:268871-268962:-1:exon
so has part: feature:268583-268674:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:237020-241734:-1:exon

position:279700:-1
position: 279700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279484-279700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268583-268674:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:237020-241734:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040654818.1
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(237020..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268583..268674,268871..268962,270936..271064,271273..271362))
location: region:237020-271362:-1
so has part: feature:271273-271362:-1:exon
so has part: feature:270936-271064:-1:exon
so has part: feature:268871-268962:-1:exon
so has part: feature:268583-268674:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:237020-241734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271273-271362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268583-268674:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:237020-241734:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X2
translation: MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETYLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLPTKMENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVRESKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(240587..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268583..268674,270936..271064,271273..271362,272580..272698,279484..279759))
location: region:240587-279759:-1
so has part: feature:279484-279759:-1:exon
so has part: feature:272580-272698:-1:exon
so has part: feature:271273-271362:-1:exon
so has part: feature:270936-271064:-1:exon
so has part: feature:268583-268674:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:240587-241734:-1:exon

XP_003643160.1
type: Protein
SIO_000068: ncbiprotein

position:240587:-1
position: 240587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279759:-1
position: 279759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279484-279759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272580-272698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271273-271362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268583-268674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240587-241734:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X1
translation: MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETYLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLPTKMENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVRESKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(240587..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268871..268962,270936..271064,271273..271362,272580..272698,279484..279759))
location: region:240587-279759:-1
so has part: feature:279484-279759:-1:exon
so has part: feature:272580-272698:-1:exon
so has part: feature:271273-271362:-1:exon
so has part: feature:270936-271064:-1:exon
so has part: feature:268871-268962:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:240587-241734:-1:exon

XP_424477.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279484-279759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272580-272698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271273-271362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240587-241734:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X1
translation: MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETYLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLPTKMENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVRESKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(240587..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268871..268962,270936..271064,271273..271362,272580..272698,279484..279759))
location: region:240587-279759:-1
so has part: feature:279484-279759:-1:exon
so has part: feature:272580-272698:-1:exon
so has part: feature:271273-271362:-1:exon
so has part: feature:270936-271064:-1:exon
so has part: feature:268871-268962:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:240587-241734:-1:exon

XP_040510751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279484-279759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272580-272698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271273-271362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240587-241734:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X1
translation: MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETYLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLPTKMENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVRESKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(240587..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268871..268962,270936..271064,271273..271362,272580..272698,279484..279759))
location: region:240587-279759:-1
so has part: feature:279484-279759:-1:exon
so has part: feature:272580-272698:-1:exon
so has part: feature:271273-271362:-1:exon
so has part: feature:270936-271064:-1:exon
so has part: feature:268871-268962:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:240587-241734:-1:exon

XP_015155743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279484-279759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272580-272698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271273-271362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270936-271064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240587-241734:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X3
translation: MELARFQCDHDGVYNRVCKPRQCFSSAHFQGSESFENYFCNSRYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETYLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLPTKMENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVRESKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(240587..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268583..268674,268871..268962,270936..270971))
location: region:240587-270971:-1
so has part: feature:270936-270971:-1:exon
so has part: feature:268871-268962:-1:exon
so has part: feature:268583-268674:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:240587-241734:-1:exon

XP_040510752.1
type: Protein
SIO_000068: ncbiprotein

position:270971:-1
position: 270971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270936-270971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268583-268674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:240587-241734:-1:exon

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X3
translation: MELARFQCDHDGVYNRVCKPRQCFSSAHFQGSESFENYFCNSRYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETYLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLPTKMENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVRESKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(240587..241734,242232..242502,243049..243153,243796..243933,244258..244311,244739..245023,248311..248433,252476..252649,253052..253206,253883..254000,254407..254877,255590..255946,256523..256696,257244..257482,259153..259288,261124..261483,262236..262523,262714..262920,263382..263523,263951..264014,264436..264657,268583..268674,268871..268962,270936..270971))
location: region:240587-270971:-1
so has part: feature:270936-270971:-1:exon
so has part: feature:268871-268962:-1:exon
so has part: feature:268583-268674:-1:exon
so has part: feature:264436-264657:-1:exon
so has part: feature:263951-264014:-1:exon
so has part: feature:263382-263523:-1:exon
so has part: feature:262714-262920:-1:exon
so has part: feature:262236-262523:-1:exon
so has part: feature:261124-261483:-1:exon
so has part: feature:259153-259288:-1:exon
so has part: feature:257244-257482:-1:exon
so has part: feature:256523-256696:-1:exon
so has part: feature:255590-255946:-1:exon
so has part: feature:254407-254877:-1:exon
so has part: feature:253883-254000:-1:exon
so has part: feature:253052-253206:-1:exon
so has part: feature:252476-252649:-1:exon
so has part: feature:248311-248433:-1:exon
so has part: feature:244739-245023:-1:exon
so has part: feature:244258-244311:-1:exon
so has part: feature:243796-243933:-1:exon
so has part: feature:243049-243153:-1:exon
so has part: feature:242232-242502:-1:exon
so has part: feature:240587-241734:-1:exon

XP_040510753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270936-270971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268871-268962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268583-268674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264436-264657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263951-264014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263382-263523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262714-262920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262236-262523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261124-261483:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259153-259288:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257244-257482:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256523-256696:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255590-255946:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:254407-254877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:253883-254000:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:253052-253206:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:252476-252649:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:248311-248433:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244739-245023:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244258-244311:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243796-243933:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243049-243153:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242232-242502:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:240587-241734:-1:exon

METTL7A
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: METTL7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 293762..295648
location: region:293762-295648:1
so has part: feature:293762-295648:1:exon
subclass of: SO_0000010

426871
type: Gene
SIO_000068: ncbigene

position:293762:1
position: 293762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295648:1
position: 295648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293762-295648:1:exon

METTL7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: METTL7A
product: methyltransferase like 7A
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_424479.8
SIO_010081: METTL7A
subclass of: SO_0000673
so part of: METTL7A
location: join(293762..294461,295271..295648)
location: region:293762-295648:1
so has part: feature:293762-294461:1:exon
so has part: feature:295271-295648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293762-294461:1:exon

position:294461:1
position: 294461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295271-295648:1:exon

position:295271:1
position: 295271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: METTL7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 7A
translation: MTGLTILFLRACLALLAMPIYLLSFLGIWEPFCKKVFFPYFLERVAVIHNRKTKKQKQELFRNLPDFTGPSGELKLLEIGTGCGANFQFYPPGCKVTCSDVNPNFQQGLSRSMSKNQHIHYERFLTAAGEDLHQVPSGSVDAVVCTLVLCSVQSVSKTLKEAQRVLRPGGVFYFLEHVAANPSSWKLFWQQVCHPTWKLVFDGCCLTREIWKDLEEANFSELKLQHISVPLPWTPIKPHIIGYAVK
SIO_010081: METTL7A
subclass of: SO_0000673
so part of: METTL7A
location: join(293958..294461,295271..295507)
location: region:293958-295507:1
so has part: feature:293958-294461:1:exon
so has part: feature:295271-295507:1:exon

XP_424479.3
type: Protein
SIO_000068: ncbiprotein

position:293958:1
position: 293958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295507:1
position: 295507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293958-294461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295271-295507:1:exon

TMPRSS12
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296307..299928
location: region:296307-299928:1
so has part: feature:296307-299928:1:exon
subclass of: SO_0000010

426872
type: Gene
SIO_000068: ncbigene

position:296307:1
position: 296307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299928:1
position: 299928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296307-299928:1:exon

TMPRSS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: TMPRSS12
product: transmembrane protease, serine 12
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_424480.7
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(296307..296436,296842..297040,297668..297939,298601..298743,299562..299928)
location: region:296307-299928:1
so has part: feature:296307-296436:1:exon
so has part: feature:296842-297040:1:exon
so has part: feature:297668-297939:1:exon
so has part: feature:298601-298743:1:exon
so has part: feature:299562-299928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296307-296436:1:exon

position:296436:1
position: 296436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296842-297040:1:exon

position:296842:1
position: 296842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297040:1
position: 297040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297668-297939:1:exon

position:297668:1
position: 297668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297939:1
position: 297939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:298601-298743:1:exon

position:298601:1
position: 298601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298743:1
position: 298743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299562-299928:1:exon

position:299562:1
position: 299562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMPRSS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 12
translation: MRPWLPTASMLLLWVLASTVPAVVAPWMSLEVLVECGRRPLMDSAAGSRIVGGHEAPLGAWPWAVSLQVHLVGVEFAHVCGGALVSENSVLTAGHCTTGRMDPYYWRAVLGTDNLWKHGKHAAKRSITHIFVHPEFNRETFENDIALFKLHSAVHYSNYIQPICLPPAHPQLYTHNKTKCFISGWGRIAEKGRTSSVLQEAEVEIIPSDVCNGSDAYGGLINANMICAGSPLGGVDSCQGDSGGPLACHHPTANKYYMMGVTSFGLGCGHPNFPGIYVRLAPYRRWIKSQLLLSSTATAPASTALTLTAVGMVLLYAS
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(296334..296436,296842..297040,297668..297939,298601..298743,299562..299801)
location: region:296334-299801:1
so has part: feature:296334-296436:1:exon
so has part: feature:296842-297040:1:exon
so has part: feature:297668-297939:1:exon
so has part: feature:298601-298743:1:exon
so has part: feature:299562-299801:1:exon

XP_424480.2
type: Protein
SIO_000068: ncbiprotein

position:296334:1
position: 296334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299801:1
position: 299801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296334-296436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296842-297040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297668-297939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:298601-298743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299562-299801:1:exon

ATF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(300918..314494)
location: region:300918-314494:-1
so has part: feature:300918-314494:-1:exon
subclass of: SO_0000010

426873
type: Gene
SIO_000068: ncbigene

position:300918:-1
position: 300918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314494:-1
position: 314494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300918-314494:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X9
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300261.4
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310566..310635,314284..314494))
location: region:300918-314494:-1
so has part: feature:314284-314494:-1:exon
so has part: feature:310566-310635:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:300918-303736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314284-314494:-1:exon

position:314284:-1
position: 314284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310566-310635:-1:exon

position:310566:-1
position: 310566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310635:-1
position: 310635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308483-308611:-1:exon

position:308483:-1
position: 308483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308611:-1
position: 308611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306583-306683:-1:exon

position:306583:-1
position: 306583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306683:-1
position: 306683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:305562-305692:-1:exon

position:305562:-1
position: 305562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305692:-1
position: 305692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:304788-304967:-1:exon

position:304788:-1
position: 304788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304967:-1
position: 304967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:304533-304692:-1:exon

position:304533:-1
position: 304533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304692:-1
position: 304692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:300918-303736:-1:exon

position:303736:-1
position: 303736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_424481.8
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310522..310635,314284..314494))
location: region:300918-314494:-1
so has part: feature:314284-314494:-1:exon
so has part: feature:310522-310635:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:300918-303736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314284-314494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310522-310635:-1:exon

position:310522:-1
position: 310522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X7
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904983.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310349..310425,310522..310635,314284..314494))
location: region:300918-314494:-1
so has part: feature:314284-314494:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:314284-314494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310349-310425:-1:exon

position:310349:-1
position: 310349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310425:-1
position: 310425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904981.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310522..310635,310895..311030,314284..314494))
location: region:300918-314494:-1
so has part: feature:314284-314494:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:314284-314494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310895-311030:-1:exon

position:310895:-1
position: 310895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311030:-1
position: 311030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654826.2
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310349..310425,310522..310635,310895..311030,314284..314494))
location: region:300918-314494:-1
so has part: feature:314284-314494:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:314284-314494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310895-311030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310349-310425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904980.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310522..310635,313540..313863,314284..314494))
location: region:300918-314494:-1
so has part: feature:314284-314494:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:314284-314494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313540-313863:-1:exon

position:313540:-1
position: 313540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313863:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904979.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310349..310425,310522..310635,310895..311030,313540..313863,314284..314494))
location: region:300918-314494:-1
so has part: feature:314284-314494:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:314284-314494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313540-313863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310895-311030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:310349-310425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904982.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310522..310635,310895..311030,313540..313997))
location: region:300918-313997:-1
so has part: feature:313540-313997:-1:exon
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position:313997:-1
position: 313997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313540-313997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310895-311030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X10
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904984.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310566..310635,310895..311013))
location: region:300918-311013:-1
so has part: feature:310895-311013:-1:exon
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position:311013:-1
position: 311013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310895-311013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310566-310635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ATF1
product: activating transcription factor 1, transcript variant X8
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300262.4
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(300918..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,309975..310373))
location: region:300918-310373:-1
so has part: feature:309975-310373:-1:exon
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so has part: feature:306583-306683:-1:exon
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so has part: feature:304533-304692:-1:exon
so has part: feature:300918-303736:-1:exon

position:310373:-1
position: 310373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309975-310373:-1:exon

position:309975:-1
position: 309975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300918-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X2
translation: MRRPSLLSVVPGKRTTALSICWLIMEEVHKSSSSSVPPSQPSAVQGTALQAAQLSHIAQQMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310522..310635,313540..313605))
location: region:303592-313605:-1
so has part: feature:313540-313605:-1:exon
so has part: feature:310522-310635:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_046760936.1
type: Protein
SIO_000068: ncbiprotein

position:303592:-1
position: 303592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313605:-1
position: 313605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313540-313605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X1
translation: MRRPSLLSVVPGKRTTALSICWLLEDGFGCELGGTLGKLFYLKAALFGFSSYISWSDGAFSPKPGIFADYGRGAQEQQQLRAALPALGRTRYSTAGSSALSYCSTETLGEGKNERRLREIYILMDSTINKRMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310349..310425,310522..310635,310895..311030,313540..313605))
location: region:303592-313605:-1
so has part: feature:313540-313605:-1:exon
so has part: feature:310895-311030:-1:exon
so has part: feature:310522-310635:-1:exon
so has part: feature:310349-310425:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_046760935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313540-313605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310895-311030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310349-310425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X3
translation: MVHFHQNPGYSLIMEEVHKSSSSSVPPSQPSAVQGTALQAAQLSHIAQQMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310522..310635,310895..310927))
location: region:303592-310927:-1
so has part: feature:310895-310927:-1:exon
so has part: feature:310522-310635:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_046760937.1
type: Protein
SIO_000068: ncbiprotein

position:310927:-1
position: 310927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310895-310927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X3
translation: MVHFHQNPGYSLIMEEVHKSSSSSVPPSQPSAVQGTALQAAQLSHIAQQMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310522..310635,310895..310927))
location: region:303592-310927:-1
so has part: feature:310895-310927:-1:exon
so has part: feature:310522-310635:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_046760938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310895-310927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310522-310635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X4
translation: MEEVHKSSSSSVPPSQPSAVQGTALQAAQLSHIAQQMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310522..310629))
location: region:303592-310629:-1
so has part: feature:310522-310629:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_424481.3
type: Protein
SIO_000068: ncbiprotein

position:310629:-1
position: 310629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310522-310629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X5
translation: MDSTINKRMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310349..310372))
location: region:303592-310372:-1
so has part: feature:310349-310372:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_040510760.1
type: Protein
SIO_000068: ncbiprotein

position:310372:-1
position: 310372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310349-310372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X5
translation: MDSTINKRMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611,310349..310372))
location: region:303592-310372:-1
so has part: feature:310349-310372:-1:exon
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_046760939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310349-310372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X6
translation: MSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611))
location: region:303592-308611:-1
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_046760940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X6
translation: MSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611))
location: region:303592-308611:-1
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_015155747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303592-303736:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X6
translation: MSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASASADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(303592..303736,304533..304692,304788..304967,305562..305692,306583..306683,308483..308611))
location: region:303592-308611:-1
so has part: feature:308483-308611:-1:exon
so has part: feature:306583-306683:-1:exon
so has part: feature:305562-305692:-1:exon
so has part: feature:304788-304967:-1:exon
so has part: feature:304533-304692:-1:exon
so has part: feature:303592-303736:-1:exon

XP_015155748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308483-308611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306583-306683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305562-305692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304788-304967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304533-304692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303592-303736:-1:exon

DIP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(315533..377693)
location: region:315533-377693:-1
so has part: feature:315533-377693:-1:exon
subclass of: SO_0000010

426874
type: Gene
SIO_000068: ncbigene

position:315533:-1
position: 315533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377693:-1
position: 377693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315533-377693:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_004949722.5
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(315533..319455,319958..320081,320265..320442,320907..320981,321326..321383,321505..321566,322059..322229,323187..323355,323910..324040,324655..324764,325416..325527,326074..326195,327197..327320,327910..327990,328127..328236,328864..329065,330016..330130,330454..330581,330872..330952,331264..331400,331490..331629,332246..332360,333468..333587,334097..334190,334320..334384,334925..335027,335760..335869,336379..336502,337133..337243,337730..337821,338060..338257,338830..338949,339701..339844,343552..343677,344150..344290,349722..349793,377437..377693))
location: region:315533-377693:-1
so has part: feature:377437-377693:-1:exon
so has part: feature:349722-349793:-1:exon
so has part: feature:344150-344290:-1:exon
so has part: feature:343552-343677:-1:exon
so has part: feature:339701-339844:-1:exon
so has part: feature:338830-338949:-1:exon
so has part: feature:338060-338257:-1:exon
so has part: feature:337730-337821:-1:exon
so has part: feature:337133-337243:-1:exon
so has part: feature:336379-336502:-1:exon
so has part: feature:335760-335869:-1:exon
so has part: feature:334925-335027:-1:exon
so has part: feature:334320-334384:-1:exon
so has part: feature:334097-334190:-1:exon
so has part: feature:333468-333587:-1:exon
so has part: feature:332246-332360:-1:exon
so has part: feature:331490-331629:-1:exon
so has part: feature:331264-331400:-1:exon
so has part: feature:330872-330952:-1:exon
so has part: feature:330454-330581:-1:exon
so has part: feature:330016-330130:-1:exon
so has part: feature:328864-329065:-1:exon
so has part: feature:328127-328236:-1:exon
so has part: feature:327910-327990:-1:exon
so has part: feature:327197-327320:-1:exon
so has part: feature:326074-326195:-1:exon
so has part: feature:325416-325527:-1:exon
so has part: feature:324655-324764:-1:exon
so has part: feature:323910-324040:-1:exon
so has part: feature:323187-323355:-1:exon
so has part: feature:322059-322229:-1:exon
so has part: feature:321505-321566:-1:exon
so has part: feature:321326-321383:-1:exon
so has part: feature:320907-320981:-1:exon
so has part: feature:320265-320442:-1:exon
so has part: feature:319958-320081:-1:exon
so has part: feature:315533-319455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377437-377693:-1:exon

position:377437:-1
position: 377437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:349722-349793:-1:exon

position:349722:-1
position: 349722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349793:-1
position: 349793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344150-344290:-1:exon

position:344150:-1
position: 344150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344290:-1
position: 344290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:343552-343677:-1:exon

position:343552:-1
position: 343552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343677:-1
position: 343677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:339701-339844:-1:exon

position:339701:-1
position: 339701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339844:-1
position: 339844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338830-338949:-1:exon

position:338830:-1
position: 338830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338949:-1
position: 338949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:338060-338257:-1:exon

position:338060:-1
position: 338060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338257:-1
position: 338257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337730-337821:-1:exon

position:337730:-1
position: 337730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337821:-1
position: 337821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:337133-337243:-1:exon

position:337133:-1
position: 337133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337243:-1
position: 337243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:336379-336502:-1:exon

position:336379:-1
position: 336379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336502:-1
position: 336502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:335760-335869:-1:exon

position:335760:-1
position: 335760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335869:-1
position: 335869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:334925-335027:-1:exon

position:334925:-1
position: 334925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335027:-1
position: 335027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:334320-334384:-1:exon

position:334320:-1
position: 334320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334384:-1
position: 334384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:334097-334190:-1:exon

position:334097:-1
position: 334097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334190:-1
position: 334190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:333468-333587:-1:exon

position:333468:-1
position: 333468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333587:-1
position: 333587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:332246-332360:-1:exon

position:332246:-1
position: 332246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332360:-1
position: 332360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:331490-331629:-1:exon

position:331490:-1
position: 331490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331629:-1
position: 331629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:331264-331400:-1:exon

position:331264:-1
position: 331264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331400:-1
position: 331400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:330872-330952:-1:exon

position:330872:-1
position: 330872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330952:-1
position: 330952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:330454-330581:-1:exon

position:330454:-1
position: 330454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330581:-1
position: 330581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:330016-330130:-1:exon

position:330016:-1
position: 330016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330130:-1
position: 330130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:328864-329065:-1:exon

position:328864:-1
position: 328864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329065:-1
position: 329065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:328127-328236:-1:exon

position:328127:-1
position: 328127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328236:-1
position: 328236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:327910-327990:-1:exon

position:327910:-1
position: 327910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327990:-1
position: 327990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:327197-327320:-1:exon

position:327197:-1
position: 327197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327320:-1
position: 327320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:326074-326195:-1:exon

position:326074:-1
position: 326074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326195:-1
position: 326195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:325416-325527:-1:exon

position:325416:-1
position: 325416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325527:-1
position: 325527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:324655-324764:-1:exon

position:324655:-1
position: 324655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324764:-1
position: 324764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:323910-324040:-1:exon

position:323910:-1
position: 323910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324040:-1
position: 324040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:323187-323355:-1:exon

position:323187:-1
position: 323187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323355:-1
position: 323355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:322059-322229:-1:exon

position:322059:-1
position: 322059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322229:-1
position: 322229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:321505-321566:-1:exon

position:321505:-1
position: 321505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321566:-1
position: 321566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:321326-321383:-1:exon

position:321326:-1
position: 321326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321383:-1
position: 321383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:320907-320981:-1:exon

position:320907:-1
position: 320907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320981:-1
position: 320981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:320265-320442:-1:exon

position:320265:-1
position: 320265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320442:-1
position: 320442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:319958-320081:-1:exon

position:319958:-1
position: 319958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320081:-1
position: 320081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:315533-319455:-1:exon

position:319455:-1
position: 319455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_004949723.5
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(315533..319455,319958..320081,320265..320442,320907..320981,321326..321383,321505..321566,322059..322229,323187..323355,323910..324040,324655..324764,325416..325527,326074..326195,327197..327320,327910..327990,328127..328236,328864..329065,330016..330130,330454..330581,330872..330952,331264..331400,331490..331629,332246..332360,333468..333587,334097..334190,334320..334384,334925..335027,335760..335869,336379..336502,337133..337243,337730..337821,338060..338257,338830..338949,339701..339844,342112..342324,343552..343677,344150..344290,349722..349793,377437..377693))
location: region:315533-377693:-1
so has part: feature:377437-377693:-1:exon
so has part: feature:349722-349793:-1:exon
so has part: feature:344150-344290:-1:exon
so has part: feature:343552-343677:-1:exon
so has part: feature:342112-342324:-1:exon
so has part: feature:339701-339844:-1:exon
so has part: feature:338830-338949:-1:exon
so has part: feature:338060-338257:-1:exon
so has part: feature:337730-337821:-1:exon
so has part: feature:337133-337243:-1:exon
so has part: feature:336379-336502:-1:exon
so has part: feature:335760-335869:-1:exon
so has part: feature:334925-335027:-1:exon
so has part: feature:334320-334384:-1:exon
so has part: feature:334097-334190:-1:exon
so has part: feature:333468-333587:-1:exon
so has part: feature:332246-332360:-1:exon
so has part: feature:331490-331629:-1:exon
so has part: feature:331264-331400:-1:exon
so has part: feature:330872-330952:-1:exon
so has part: feature:330454-330581:-1:exon
so has part: feature:330016-330130:-1:exon
so has part: feature:328864-329065:-1:exon
so has part: feature:328127-328236:-1:exon
so has part: feature:327910-327990:-1:exon
so has part: feature:327197-327320:-1:exon
so has part: feature:326074-326195:-1:exon
so has part: feature:325416-325527:-1:exon
so has part: feature:324655-324764:-1:exon
so has part: feature:323910-324040:-1:exon
so has part: feature:323187-323355:-1:exon
so has part: feature:322059-322229:-1:exon
so has part: feature:321505-321566:-1:exon
so has part: feature:321326-321383:-1:exon
so has part: feature:320907-320981:-1:exon
so has part: feature:320265-320442:-1:exon
so has part: feature:319958-320081:-1:exon
so has part: feature:315533-319455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377437-377693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349722-349793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344150-344290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343552-343677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342112-342324:-1:exon

position:342112:-1
position: 342112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342324:-1
position: 342324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:339701-339844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338830-338949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338060-338257:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:337730-337821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:337133-337243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336379-336502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335760-335869:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334925-335027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334320-334384:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:334097-334190:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:333468-333587:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:332246-332360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:331490-331629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:331264-331400:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:330872-330952:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:330454-330581:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:330016-330130:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:328864-329065:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:328127-328236:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:327910-327990:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:327197-327320:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:326074-326195:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:325416-325527:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:324655-324764:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:323910-324040:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:323187-323355:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:322059-322229:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:321505-321566:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:321326-321383:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:320907-320981:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:320265-320442:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:319958-320081:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:315533-319455:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X2
translation: MAEPAAAGISSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRTQTPTPSATPAPAPSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPENFSVPPDVTATTSSSSTRPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHTHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGAPQLCKTDEIGEICVSSRAGGMMYYGLAGLTKSTFEVIPLNSAGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAHTTPDHALFLLLNAKGTAVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTSEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLSLWLSTVSQHKIRDTFCSYSVMELCTKGLGNQVETLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(319203..319455,319958..320081,320265..320442,320907..320981,321326..321383,321505..321566,322059..322229,323187..323355,323910..324040,324655..324764,325416..325527,326074..326195,327197..327320,327910..327990,328127..328236,328864..329065,330016..330130,330454..330581,330872..330952,331264..331400,331490..331629,332246..332360,333468..333587,334097..334190,334320..334384,334925..335027,335760..335869,336379..336502,337133..337243,337730..337821,338060..338257,338830..338949,339701..339844,343552..343677,344150..344290,349722..349793,377437..377524))
location: region:319203-377524:-1
so has part: feature:377437-377524:-1:exon
so has part: feature:349722-349793:-1:exon
so has part: feature:344150-344290:-1:exon
so has part: feature:343552-343677:-1:exon
so has part: feature:339701-339844:-1:exon
so has part: feature:338830-338949:-1:exon
so has part: feature:338060-338257:-1:exon
so has part: feature:337730-337821:-1:exon
so has part: feature:337133-337243:-1:exon
so has part: feature:336379-336502:-1:exon
so has part: feature:335760-335869:-1:exon
so has part: feature:334925-335027:-1:exon
so has part: feature:334320-334384:-1:exon
so has part: feature:334097-334190:-1:exon
so has part: feature:333468-333587:-1:exon
so has part: feature:332246-332360:-1:exon
so has part: feature:331490-331629:-1:exon
so has part: feature:331264-331400:-1:exon
so has part: feature:330872-330952:-1:exon
so has part: feature:330454-330581:-1:exon
so has part: feature:330016-330130:-1:exon
so has part: feature:328864-329065:-1:exon
so has part: feature:328127-328236:-1:exon
so has part: feature:327910-327990:-1:exon
so has part: feature:327197-327320:-1:exon
so has part: feature:326074-326195:-1:exon
so has part: feature:325416-325527:-1:exon
so has part: feature:324655-324764:-1:exon
so has part: feature:323910-324040:-1:exon
so has part: feature:323187-323355:-1:exon
so has part: feature:322059-322229:-1:exon
so has part: feature:321505-321566:-1:exon
so has part: feature:321326-321383:-1:exon
so has part: feature:320907-320981:-1:exon
so has part: feature:320265-320442:-1:exon
so has part: feature:319958-320081:-1:exon
so has part: feature:319203-319455:-1:exon

XP_004949779.1
type: Protein
SIO_000068: ncbiprotein

position:319203:-1
position: 319203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377524:-1
position: 377524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377437-377524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349722-349793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344150-344290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343552-343677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:339701-339844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338830-338949:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338060-338257:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337730-337821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:337133-337243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336379-336502:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:335760-335869:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:334925-335027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334320-334384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334097-334190:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:333468-333587:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:332246-332360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331490-331629:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:331264-331400:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:330872-330952:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:330454-330581:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:330016-330130:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:328864-329065:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:328127-328236:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:327910-327990:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:327197-327320:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:326074-326195:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:325416-325527:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:324655-324764:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:323910-324040:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:323187-323355:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:322059-322229:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:321505-321566:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:321326-321383:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:320907-320981:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:320265-320442:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:319958-320081:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:319203-319455:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X1
translation: MAEPAAAGISSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRTQTPTPSATPAPAPSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSIQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIENFSVPPDVTATTSSSSTRPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHTHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGAPQLCKTDEIGEICVSSRAGGMMYYGLAGLTKSTFEVIPLNSAGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAHTTPDHALFLLLNAKGTAVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTSEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLSLWLSTVSQHKIRDTFCSYSVMELCTKGLGNQVETLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(319203..319455,319958..320081,320265..320442,320907..320981,321326..321383,321505..321566,322059..322229,323187..323355,323910..324040,324655..324764,325416..325527,326074..326195,327197..327320,327910..327990,328127..328236,328864..329065,330016..330130,330454..330581,330872..330952,331264..331400,331490..331629,332246..332360,333468..333587,334097..334190,334320..334384,334925..335027,335760..335869,336379..336502,337133..337243,337730..337821,338060..338257,338830..338949,339701..339844,342112..342324,343552..343677,344150..344290,349722..349793,377437..377524))
location: region:319203-377524:-1
so has part: feature:377437-377524:-1:exon
so has part: feature:349722-349793:-1:exon
so has part: feature:344150-344290:-1:exon
so has part: feature:343552-343677:-1:exon
so has part: feature:342112-342324:-1:exon
so has part: feature:339701-339844:-1:exon
so has part: feature:338830-338949:-1:exon
so has part: feature:338060-338257:-1:exon
so has part: feature:337730-337821:-1:exon
so has part: feature:337133-337243:-1:exon
so has part: feature:336379-336502:-1:exon
so has part: feature:335760-335869:-1:exon
so has part: feature:334925-335027:-1:exon
so has part: feature:334320-334384:-1:exon
so has part: feature:334097-334190:-1:exon
so has part: feature:333468-333587:-1:exon
so has part: feature:332246-332360:-1:exon
so has part: feature:331490-331629:-1:exon
so has part: feature:331264-331400:-1:exon
so has part: feature:330872-330952:-1:exon
so has part: feature:330454-330581:-1:exon
so has part: feature:330016-330130:-1:exon
so has part: feature:328864-329065:-1:exon
so has part: feature:328127-328236:-1:exon
so has part: feature:327910-327990:-1:exon
so has part: feature:327197-327320:-1:exon
so has part: feature:326074-326195:-1:exon
so has part: feature:325416-325527:-1:exon
so has part: feature:324655-324764:-1:exon
so has part: feature:323910-324040:-1:exon
so has part: feature:323187-323355:-1:exon
so has part: feature:322059-322229:-1:exon
so has part: feature:321505-321566:-1:exon
so has part: feature:321326-321383:-1:exon
so has part: feature:320907-320981:-1:exon
so has part: feature:320265-320442:-1:exon
so has part: feature:319958-320081:-1:exon
so has part: feature:319203-319455:-1:exon

XP_004949780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377437-377524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349722-349793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344150-344290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343552-343677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342112-342324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339701-339844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338830-338949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338060-338257:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:337730-337821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:337133-337243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336379-336502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335760-335869:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334925-335027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334320-334384:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:334097-334190:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:333468-333587:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:332246-332360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:331490-331629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:331264-331400:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:330872-330952:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:330454-330581:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:330016-330130:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:328864-329065:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:328127-328236:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:327910-327990:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:327197-327320:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:326074-326195:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:325416-325527:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:324655-324764:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:323910-324040:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:323187-323355:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:322059-322229:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:321505-321566:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:321326-321383:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:320907-320981:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:320265-320442:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:319958-320081:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:319203-319455:-1:exon

MIR1668
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: gga-mir-1668
gene: MIR1668
gene synonym: gga-mir-1668
note: microRNA 1668; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(375313..375402)
location: region:375313-375402:-1
so has part: feature:375313-375402:-1:exon
subclass of: SO_0000571

100315917
type: Gene
SIO_000068: ncbigene

MI0007402
type: miRBase
SIO_000068: mirbase

position:375313:-1
position: 375313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375402:-1
position: 375402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375313-375402:-1:exon

MIR1668
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9031
alternative label: gga-mir-1668
gene: MIR1668
gene synonym: gga-mir-1668
product: microRNA 1668
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_035161.2
SIO_010081: MIR1668
subclass of: SO_0000673
so part of: MIR1668
location: complement(375313..375402)
location: region:375313-375402:-1
so has part: feature:375313-375402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375313-375402:-1:exon

MIR1668
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
alternative label: gga-mir-1668
nc RNA class: miRNA
gene: MIR1668
gene synonym: gga-mir-1668
product: gga-miR-1668-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR1668
subclass of: SO_0000673
so part of: MIR1668
location: complement(375329..375349)
location: region:375329-375349:-1
so has part: feature:375329-375349:-1:exon

MIMAT0007552
type: miRBase
SIO_000068: mirbase

position:375329:-1
position: 375329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375349:-1
position: 375349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375329-375349:-1:exon

MIR1668
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
alternative label: gga-mir-1668
nc RNA class: miRNA
gene: MIR1668
gene synonym: gga-mir-1668
product: gga-miR-1668-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR1668
subclass of: SO_0000673
so part of: MIR1668
location: complement(375365..375386)
location: region:375365-375386:-1
so has part: feature:375365-375386:-1:exon

MIMAT0007551
type: miRBase
SIO_000068: mirbase

position:375365:-1
position: 375365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375386:-1
position: 375386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375365-375386:-1:exon

LARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LARP4
note: La ribonucleoprotein domain family member 4; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(378015..397756)
location: region:378015-397756:-1
so has part: feature:378015-397756:-1:exon
subclass of: SO_0000010

426876
type: Gene
SIO_000068: ncbigene

position:378015:-1
position: 378015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397756:-1
position: 397756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378015-397756:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LARP4
product: La ribonucleoprotein domain family member 4
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001395973.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 26 substitutions, 7 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001395973.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(378015..382916,383118..383289,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392429,393010..393154,397604..397756))
location: region:378015-397756:-1
so has part: feature:397604-397756:-1:exon
so has part: feature:393010-393154:-1:exon
so has part: feature:392271-392429:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383289:-1:exon
so has part: feature:378015-382916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397756:-1:exon

position:397604:-1
position: 397604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393010-393154:-1:exon

position:393010:-1
position: 393010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393154:-1
position: 393154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:392271-392429:-1:exon

position:392271:-1
position: 392271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392429:-1
position: 392429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:391845-391920:-1:exon

position:391845:-1
position: 391845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391920:-1
position: 391920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:391198-391334:-1:exon

position:391198:-1
position: 391198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391334:-1
position: 391334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:390815-390918:-1:exon

position:390815:-1
position: 390815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390918:-1
position: 390918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389704-389814:-1:exon

position:389704:-1
position: 389704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389814:-1
position: 389814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:389293-389346:-1:exon

position:389293:-1
position: 389293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389346:-1
position: 389346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:388464-388673:-1:exon

position:388464:-1
position: 388464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388673:-1
position: 388673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:387912-388015:-1:exon

position:387912:-1
position: 387912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388015:-1
position: 388015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:384962-385195:-1:exon

position:384962:-1
position: 384962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385195:-1
position: 385195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:384534-384582:-1:exon

position:384534:-1
position: 384534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384582:-1
position: 384582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:384224-384382:-1:exon

position:384224:-1
position: 384224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384382:-1
position: 384382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:383538-383659:-1:exon

position:383538:-1
position: 383538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383659:-1
position: 383659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:383118-383289:-1:exon

position:383118:-1
position: 383118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383289:-1
position: 383289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:378015-382916:-1:exon

position:382916:-1
position: 382916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300230.4
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(378246..382916,383118..383286,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392429,393010..393157,397604..397723))
location: region:378246-397723:-1
so has part: feature:397604-397723:-1:exon
so has part: feature:393010-393157:-1:exon
so has part: feature:392271-392429:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383286:-1:exon
so has part: feature:378246-382916:-1:exon

position:378246:-1
position: 378246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397723:-1
position: 397723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393010-393157:-1:exon

position:393157:-1
position: 393157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:392271-392429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383118-383286:-1:exon

position:383286:-1
position: 383286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:378246-382916:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300229.4
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(378246..382916,383118..383289,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392429,393010..393157,397604..397723))
location: region:378246-397723:-1
so has part: feature:397604-397723:-1:exon
so has part: feature:393010-393157:-1:exon
so has part: feature:392271-392429:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383289:-1:exon
so has part: feature:378246-382916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393010-393157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392271-392429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383118-383289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:378246-382916:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145294.3
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(378246..382916,383118..383289,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392429,393010..393154,396924..397723))
location: region:378246-397723:-1
so has part: feature:396924-397723:-1:exon
so has part: feature:393010-393154:-1:exon
so has part: feature:392271-392429:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383289:-1:exon
so has part: feature:378246-382916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396924-397723:-1:exon

position:396924:-1
position: 396924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393010-393154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392271-392429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383118-383289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:378246-382916:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LARP4
product: La ribonucleoprotein domain family member 4, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145293.3
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(378246..382916,383118..383289,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392429,393010..393157,396924..397723))
location: region:378246-397723:-1
so has part: feature:396924-397723:-1:exon
so has part: feature:393010-393157:-1:exon
so has part: feature:392271-392429:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383289:-1:exon
so has part: feature:378246-382916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396924-397723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393010-393157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392271-392429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383118-383289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:378246-382916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LARP4
inference: similar to AA sequence (same species):RefSeq:NP_001382902.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: la-related protein 4
translation: MLLFVEVTSKGAGLNPNAKVWQEGPQGGGEAAPPSNGTEHSWHEPAAVAGTQTEGNVEISEDGCKHYEVMYSTSCEAARNDTGIDEAAANGIVLTTEDLGYPIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIIILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPIQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAAALSIGRPFHRNRVKPHFRSSNSSEHAAEGPAAAGTVSLGDGPLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTETKTQTPKFDLLASNFPPLPGSTAKIPGEPVLESRMSDVVKGISKEKESKDLLLSCPAPAQEEQTPSVVQQPVTSVSPSGQTEAVVLSSAVQPESKPEEVSVQKDVKGHTSPPVSVCPVSDAKPPRTNSTSSPTNTSAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNIVPPAKADDGGTAERASEKAPDKAEGRMKDYCGIRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(382581..382916,383118..383289,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392429,393010..393154,397604..397621))
location: region:382581-397621:-1
so has part: feature:397604-397621:-1:exon
so has part: feature:393010-393154:-1:exon
so has part: feature:392271-392429:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383289:-1:exon
so has part: feature:382581-382916:-1:exon

NP_001382902.1
type: Protein
SIO_000068: ncbiprotein

position:382581:-1
position: 382581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397621:-1
position: 397621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393010-393154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392271-392429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383118-383289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:382581-382916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X2
translation: MLLFVEQVTSKGAGLNPNAKVWQEGPQGGGEAAPPSNGTEHSWHEPAAVAGTQTEGNVEISEDGCKHYEVMYSTSCEAARNDTGIDEAAANGIVLTTEDLGYPIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIIILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPIQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAAALSIGRPFHRNRVKPHFRSSNSSEHAAEGPAAAGTVSLGDGPLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTETKTQTPKFDLLASNFPPLPGSTAKIPGEPVLESRMSDVVKGISKEKESKDLLLSCPAPAQEEQTPSVVQQPVTSVSPSGQTEAVVLSAVQPESKPEEVSVQKDVKGHTSPPVSVCPVSAAKPPRTNSTSSPTNTSAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNIVPPAKADDGGTAERASEKAPDKAEGRMKDYCGIRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(382581..382916,383118..383286,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392429,393010..393157,397604..397621))
location: region:382581-397621:-1
so has part: feature:397604-397621:-1:exon
so has part: feature:393010-393157:-1:exon
so has part: feature:392271-392429:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383286:-1:exon
so has part: feature:382581-382916:-1:exon

XP_015155716.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393010-393157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392271-392429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383118-383286:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:382581-382916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X1
translation: MLLFVEQVTSKGAGLNPNAKVWQEGPQGGGEAAPPSNGTEHSWHEPAAVAGTQTEGNVEISEDGCKHYEVMYSTSCEAARNDTGIDEAAANGIVLTTEDLGYPIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIIILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPIQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAAALSIGRPFHRNRVKPHFRSSNSSEHAAEGPAAAGTVSLGDGPLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTETKTQTPKFDLLASNFPPLPGSTAKIPGEPVLESRMSDVVKGISKEKESKDLLLSCPAPAQEEQTPSVVQQPVTSVSPSGQTEAVVLSSAVQPESKPEEVSVQKDVKGHTSPPVSVCPVSAAKPPRTNSTSSPTNTSAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNIVPPAKADDGGTAERASEKAPDKAEGRMKDYCGIRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(382581..382916,383118..383289,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392429,393010..393157,397604..397621))
location: region:382581-397621:-1
so has part: feature:397604-397621:-1:exon
so has part: feature:393010-393157:-1:exon
so has part: feature:392271-392429:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383289:-1:exon
so has part: feature:382581-382916:-1:exon

XP_015155715.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397604-397621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393010-393157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392271-392429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383118-383289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:382581-382916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X3
translation: MYSTSCEAARNDTGIDEAAANGIVLTTEDLGYPIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIIILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPIQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAAALSIGRPFHRNRVKPHFRSSNSSEHAAEGPAAAGTVSLGDGPLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTETKTQTPKFDLLASNFPPLPGSTAKIPGEPVLESRMSDVVKGISKEKESKDLLLSCPAPAQEEQTPSVVQQPVTSVSPSGQTEAVVLSSAVQPESKPEEVSVQKDVKGHTSPPVSVCPVSAAKPPRTNSTSSPTNTSAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNIVPPAKADDGGTAERASEKAPDKAEGRMKDYCGIRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(382581..382916,383118..383289,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392385))
location: region:382581-392385:-1
so has part: feature:392271-392385:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383289:-1:exon
so has part: feature:382581-382916:-1:exon

XP_025001061.2
type: Protein
SIO_000068: ncbiprotein

position:392385:-1
position: 392385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392271-392385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:383118-383289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:382581-382916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X3
translation: MYSTSCEAARNDTGIDEAAANGIVLTTEDLGYPIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIIILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPIQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAAALSIGRPFHRNRVKPHFRSSNSSEHAAEGPAAAGTVSLGDGPLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTETKTQTPKFDLLASNFPPLPGSTAKIPGEPVLESRMSDVVKGISKEKESKDLLLSCPAPAQEEQTPSVVQQPVTSVSPSGQTEAVVLSSAVQPESKPEEVSVQKDVKGHTSPPVSVCPVSAAKPPRTNSTSSPTNTSAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNIVPPAKADDGGTAERASEKAPDKAEGRMKDYCGIRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(382581..382916,383118..383289,383538..383659,384224..384382,384534..384582,384962..385195,387912..388015,388464..388673,389293..389346,389704..389814,390815..390918,391198..391334,391845..391920,392271..392385))
location: region:382581-392385:-1
so has part: feature:392271-392385:-1:exon
so has part: feature:391845-391920:-1:exon
so has part: feature:391198-391334:-1:exon
so has part: feature:390815-390918:-1:exon
so has part: feature:389704-389814:-1:exon
so has part: feature:389293-389346:-1:exon
so has part: feature:388464-388673:-1:exon
so has part: feature:387912-388015:-1:exon
so has part: feature:384962-385195:-1:exon
so has part: feature:384534-384582:-1:exon
so has part: feature:384224-384382:-1:exon
so has part: feature:383538-383659:-1:exon
so has part: feature:383118-383289:-1:exon
so has part: feature:382581-382916:-1:exon

XP_025001062.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392271-392385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391845-391920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391198-391334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:390815-390918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389704-389814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389293-389346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388464-388673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387912-388015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384962-385195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:384534-384582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:384224-384382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:383538-383659:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:383118-383289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:382581-382916:-1:exon

LOC121108085
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121108085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(399238..406374)
location: region:399238-406374:-1
so has part: feature:399238-406374:-1:exon
subclass of: SO_0000011

121108085
type: Gene
SIO_000068: ncbigene

position:399238:-1
position: 399238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406374:-1
position: 406374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399238-406374:-1:exon

LOC121108085
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121108085
product: uncharacterized LOC121108085, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005842385.2
SIO_010081: LOC121108085
subclass of: SO_0000673
so part of: LOC121108085
location: complement(join(399238..402741,402826..402952,403965..404137,405058..405836,405945..406374))
location: region:399238-406374:-1
so has part: feature:405945-406374:-1:exon
so has part: feature:405058-405836:-1:exon
so has part: feature:403965-404137:-1:exon
so has part: feature:402826-402952:-1:exon
so has part: feature:399238-402741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405945-406374:-1:exon

position:405945:-1
position: 405945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405058-405836:-1:exon

position:405058:-1
position: 405058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405836:-1
position: 405836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403965-404137:-1:exon

position:403965:-1
position: 403965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404137:-1
position: 404137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:402826-402952:-1:exon

position:402826:-1
position: 402826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402952:-1
position: 402952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:399238-402741:-1:exon

position:402741:-1
position: 402741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121108085
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121108085
product: uncharacterized LOC121108085, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_006932289.1
SIO_010081: LOC121108085
subclass of: SO_0000673
so part of: LOC121108085
location: complement(join(399238..400439,402519..402741,402826..404137,405058..405836,405945..406374))
location: region:399238-406374:-1
so has part: feature:405945-406374:-1:exon
so has part: feature:405058-405836:-1:exon
so has part: feature:402826-404137:-1:exon
so has part: feature:402519-402741:-1:exon
so has part: feature:399238-400439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405945-406374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405058-405836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402826-404137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402519-402741:-1:exon

position:402519:-1
position: 402519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:399238-400439:-1:exon

position:400439:-1
position: 400439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121108085
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121108085
product: uncharacterized LOC121108085, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005842387.2
SIO_010081: LOC121108085
subclass of: SO_0000673
so part of: LOC121108085
location: complement(join(399238..399982,400213..402741,402826..404137,405058..405836,405945..406374))
location: region:399238-406374:-1
so has part: feature:405945-406374:-1:exon
so has part: feature:405058-405836:-1:exon
so has part: feature:402826-404137:-1:exon
so has part: feature:400213-402741:-1:exon
so has part: feature:399238-399982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405945-406374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405058-405836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402826-404137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:400213-402741:-1:exon

position:400213:-1
position: 400213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:399238-399982:-1:exon

position:399982:-1
position: 399982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121108085
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121108085
product: uncharacterized LOC121108085, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005842386.2
SIO_010081: LOC121108085
subclass of: SO_0000673
so part of: LOC121108085
location: complement(join(399238..402741,402826..404137,405058..405836,405945..406374))
location: region:399238-406374:-1
so has part: feature:405945-406374:-1:exon
so has part: feature:405058-405836:-1:exon
so has part: feature:402826-404137:-1:exon
so has part: feature:399238-402741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405945-406374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405058-405836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402826-404137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399238-402741:-1:exon

LOC121108085
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121108085
product: uncharacterized LOC121108085, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_006932288.1
SIO_010081: LOC121108085
subclass of: SO_0000673
so part of: LOC121108085
location: complement(join(399238..402741,402826..402952,404000..404223))
location: region:399238-404223:-1
so has part: feature:404000-404223:-1:exon
so has part: feature:402826-402952:-1:exon
so has part: feature:399238-402741:-1:exon

position:404223:-1
position: 404223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404000-404223:-1:exon

position:404000:-1
position: 404000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:402826-402952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399238-402741:-1:exon

LIMA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 405788..430425
location: region:405788-430425:1
so has part: feature:405788-430425:1:exon
subclass of: SO_0000010

426878
type: Gene
SIO_000068: ncbigene

position:405788:1
position: 405788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430425:1
position: 430425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405788-430425:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145593.3
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(405788..406440,409921..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:405788-430425:1
so has part: feature:405788-406440:1:exon
so has part: feature:409921-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:405788-406440:1:exon

position:406440:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:409921-410059:1:exon

position:409921:1
position: 409921
reference: sequence
type: ForwardStrandPosition
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position:410059:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:412322-412367:1:exon

position:412322:1
position: 412322
reference: sequence
type: ForwardStrandPosition
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position:412367:1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

position:414341:1
position: 414341
reference: sequence
type: ForwardStrandPosition
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position:414799:1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

position:419253:1
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reference: sequence
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position:419361:1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

position:420192:1
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reference: sequence
type: ForwardStrandPosition
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position:420340:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:422132-422239:1:exon

position:422132:1
position: 422132
reference: sequence
type: ForwardStrandPosition
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position:422239:1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:424288-424345:1:exon

position:424288:1
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reference: sequence
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position:424345:1
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urn:…
SIO_000300: 9
SIO_000628: feature:424904-425019:1:exon

position:424904:1
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position:425019:1
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urn:…
SIO_000300: 10
SIO_000628: feature:427943-428076:1:exon

position:427943:1
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position:428076:1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:428485-430425:1:exon

position:428485:1
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reference: sequence
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LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X9
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654823.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(405788..406440,409921..410059,412322..412367,414341..414799,419253..419361,420192..420340,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:405788-430425:1
so has part: feature:405788-406440:1:exon
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so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-430425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405788-406440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409921-410059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-430425:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904973.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(406552..406943,409921..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:406552-430425:1
so has part: feature:406552-406943:1:exon
so has part: feature:409921-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-430425:1:exon

position:406552:1
position: 406552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406552-406943:1:exon

position:406943:1
position: 406943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409921-410059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:428485-430425:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654821.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(406552..406943,409924..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:406552-430425:1
so has part: feature:406552-406943:1:exon
so has part: feature:409924-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-430425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406552-406943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409924-410059:1:exon

position:409924:1
position: 409924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:428485-430425:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654822.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(406552..406914,409924..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:406552-430425:1
so has part: feature:406552-406914:1:exon
so has part: feature:409924-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-430425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406552-406914:1:exon

position:406914:1
position: 406914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409924-410059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:428485-430425:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_004949728.5
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(406552..406594,409921..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:406552-430425:1
so has part: feature:406552-406594:1:exon
so has part: feature:409921-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-430425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406552-406594:1:exon

position:406594:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:409921-410059:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:428485-430425:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X7
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300254.4
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(406552..406594,409921..410059,412322..412367,414341..414799,419253..419361,420192..420340,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:406552-430425:1
so has part: feature:406552-406594:1:exon
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so has part: feature:412322-412367:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:406552-406594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409921-410059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-430425:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300253.4
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(406552..406594,409924..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:406552-430425:1
so has part: feature:406552-406594:1:exon
so has part: feature:409924-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:406552-406594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409924-410059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:428485-430425:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X8
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145594.3
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(406552..406594,409924..410059,412322..412367,414341..414799,419253..419361,420192..420340,424288..424345,424904..425019,427943..428076,428485..430425)
location: region:406552-430425:1
so has part: feature:406552-406594:1:exon
so has part: feature:409924-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
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so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-430425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406552-406594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409924-410059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-430425:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_025001361.2
type: Protein
SIO_000068: ncbiprotein

position:409941:1
position: 409941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429481:1
position: 429481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-429481:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_004949785.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-429481:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_015155739.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-429481:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_040510755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-429481:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_040510756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-429481:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,422132..422239,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:422132-422239:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_046760929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422132-422239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428485-429481:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_025001362.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428485-429481:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_040510757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428485-429481:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVPGTEPRKETLRSSCAEVRHRVASPELGVGSSLAFSSDTEQIPAAGTASHAQASSGTPGQLQSPGVDSRKSQSHSPESGKMENYLRESREVEKPEASENAESSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKVETKKSLEMPRLTETSIKDRLAKYQAAVSKQGSSTGLVTTVSVGENSLSFHSSLSEDGNVGQNLESETEVQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESLEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSTLDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDMLKRSEELEREVVVDKKHKEKIENRNMQNAEEKSVEEERELPGIKTAEHNFVENGQESAETDEEEHAVEEQQTPSEEFLEPNSPKHSSLSNVTAKESSPDQNRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(409941..410059,412322..412367,414341..414799,419253..419361,420192..420340,424288..424345,424904..425019,427943..428076,428485..429481)
location: region:409941-429481:1
so has part: feature:409941-410059:1:exon
so has part: feature:412322-412367:1:exon
so has part: feature:414341-414799:1:exon
so has part: feature:419253-419361:1:exon
so has part: feature:420192-420340:1:exon
so has part: feature:424288-424345:1:exon
so has part: feature:424904-425019:1:exon
so has part: feature:427943-428076:1:exon
so has part: feature:428485-429481:1:exon

XP_015155740.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409941-410059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412322-412367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414341-414799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419253-419361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420192-420340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424288-424345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424904-425019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427943-428076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428485-429481:1:exon

LOC121108086
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121108086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(424741..431820)
location: region:424741-431820:-1
so has part: feature:424741-431820:-1:exon
subclass of: SO_0000011

121108086
type: Gene
SIO_000068: ncbigene

position:424741:-1
position: 424741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431820:-1
position: 431820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424741-431820:-1:exon

LOC121108086
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121108086
product: uncharacterized LOC121108086
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005842389.2
SIO_010081: LOC121108086
subclass of: SO_0000673
so part of: LOC121108086
location: complement(join(424741..427598,431286..431820))
location: region:424741-431820:-1
so has part: feature:431286-431820:-1:exon
so has part: feature:424741-427598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431286-431820:-1:exon

position:431286:-1
position: 431286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424741-427598:-1:exon

position:427598:-1
position: 427598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CERS5
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 432229..450461
location: region:432229-450461:1
so has part: feature:432229-450461:1:exon
subclass of: SO_0000010

426879
type: Gene
SIO_000068: ncbigene

position:432229:1
position: 432229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450461:1
position: 450461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432229-450461:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CERS5
product: ceramide synthase 5, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_424486.7
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(432229..432530,437994..438099,440168..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,449358..450461)
location: region:432229-450461:1
so has part: feature:432229-432530:1:exon
so has part: feature:437994-438099:1:exon
so has part: feature:440168-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:449358-450461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432229-432530:1:exon

position:432530:1
position: 432530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437994-438099:1:exon

position:437994:1
position: 437994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438099:1
position: 438099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:440168-440298:1:exon

position:440168:1
position: 440168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440298:1
position: 440298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:441263-441320:1:exon

position:441263:1
position: 441263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441320:1
position: 441320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:441903-441953:1:exon

position:441903:1
position: 441903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441953:1
position: 441953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:442583-442675:1:exon

position:442583:1
position: 442583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442675:1
position: 442675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:444016-444144:1:exon

position:444016:1
position: 444016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444144:1
position: 444144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:444429-444535:1:exon

position:444429:1
position: 444429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444535:1
position: 444535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:446401-446557:1:exon

position:446401:1
position: 446401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446557:1
position: 446557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:449358-450461:1:exon

position:449358:1
position: 449358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: CERS5
product: ceramide synthase 5, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_213943.5
SIO_010081: CERS5
so part of: CERS5
location: join(432229..432530,437994..438099,440168..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,447646..447748,449358..449374)
location: region:432229-449374:1
so has part: feature:432229-432530:1:exon
so has part: feature:437994-438099:1:exon
so has part: feature:440168-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:447646-447748:1:exon
so has part: feature:449358-449374:1:exon

position:449374:1
position: 449374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432229-432530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437994-438099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440168-440298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441263-441320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441903-441953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442583-442675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444016-444144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:444429-444535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446401-446557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447646-447748:1:exon

position:447646:1
position: 447646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447748:1
position: 447748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:449358-449374:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X1
translation: MRSDWRAEAGGLRRGAPPAVGGRRRGGRGVRRRKMAAAAVAAVRAWFWNERFWLPHNVTWADLAGEPDGGLQYPRASHVLSAFPLALGIFAVRLLFERFIAKPCAINLGIQDSGAHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTITKFCESMWRFTFYLSIFLYGIRFLWTAPWFWDTRQCWYSYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQILHVIWSYLIVRTAYKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGVFSTSSNGSNRINGHVAGGQWTEEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(432238..432530,437994..438099,440168..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,449358..449510)
location: region:432238-449510:1
so has part: feature:432238-432530:1:exon
so has part: feature:437994-438099:1:exon
so has part: feature:440168-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:449358-449510:1:exon

XP_424486.2
type: Protein
SIO_000068: ncbiprotein

position:432238:1
position: 432238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449510:1
position: 449510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432238-432530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437994-438099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440168-440298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441263-441320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441903-441953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442583-442675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444016-444144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:444429-444535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446401-446557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449358-449510:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CERS5
product: ceramide synthase 5, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904977.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(432411..433222,434492..434541,436344..437857,437994..438099,440168..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,449358..450461)
location: region:432411-450461:1
so has part: feature:432411-433222:1:exon
so has part: feature:434492-434541:1:exon
so has part: feature:436344-437857:1:exon
so has part: feature:437994-438099:1:exon
so has part: feature:440168-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:449358-450461:1:exon

position:432411:1
position: 432411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432411-433222:1:exon

position:433222:1
position: 433222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434492-434541:1:exon

position:434492:1
position: 434492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434541:1
position: 434541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436344-437857:1:exon

position:436344:1
position: 436344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437857:1
position: 437857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:437994-438099:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:440168-440298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:441263-441320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441903-441953:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442583-442675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444016-444144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444429-444535:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446401-446557:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449358-450461:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CERS5
product: ceramide synthase 5, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904978.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(432411..433222,437994..438099,440168..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,449358..450461)
location: region:432411-450461:1
so has part: feature:432411-433222:1:exon
so has part: feature:437994-438099:1:exon
so has part: feature:440168-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:449358-450461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432411-433222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437994-438099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440168-440298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441263-441320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441903-441953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442583-442675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444016-444144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:444429-444535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446401-446557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449358-450461:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CERS5
product: ceramide synthase 5, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904975.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(433417..437857,437994..438099,440168..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,449358..450461)
location: region:433417-450461:1
so has part: feature:433417-437857:1:exon
so has part: feature:437994-438099:1:exon
so has part: feature:440168-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:449358-450461:1:exon

position:433417:1
position: 433417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433417-437857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437994-438099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440168-440298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441263-441320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441903-441953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442583-442675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444016-444144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:444429-444535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446401-446557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449358-450461:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X2
translation: MWRFTFYLSIFLYGIRFLWTAPWFWDTRQCWYSYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQILHVIWSYLIVRTAYKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGVFSTSSNGSNRINGHVAGGQWTEEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(440297..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,449358..449510)
location: region:440297-449510:1
so has part: feature:440297-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:449358-449510:1:exon

XP_046760931.1
type: Protein
SIO_000068: ncbiprotein

position:440297:1
position: 440297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440297-440298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441263-441320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441903-441953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442583-442675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444016-444144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444429-444535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446401-446557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449358-449510:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X2
translation: MWRFTFYLSIFLYGIRFLWTAPWFWDTRQCWYSYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQILHVIWSYLIVRTAYKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGVFSTSSNGSNRINGHVAGGQWTEEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(440297..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,449358..449510)
location: region:440297-449510:1
so has part: feature:440297-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:449358-449510:1:exon

XP_046760933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440297-440298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441263-441320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441903-441953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442583-442675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444016-444144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444429-444535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446401-446557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449358-449510:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X2
translation: MWRFTFYLSIFLYGIRFLWTAPWFWDTRQCWYSYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQILHVIWSYLIVRTAYKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGVFSTSSNGSNRINGHVAGGQWTEEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(440297..440298,441263..441320,441903..441953,442583..442675,444016..444144,444429..444535,446401..446557,449358..449510)
location: region:440297-449510:1
so has part: feature:440297-440298:1:exon
so has part: feature:441263-441320:1:exon
so has part: feature:441903-441953:1:exon
so has part: feature:442583-442675:1:exon
so has part: feature:444016-444144:1:exon
so has part: feature:444429-444535:1:exon
so has part: feature:446401-446557:1:exon
so has part: feature:449358-449510:1:exon

XP_046760934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440297-440298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441263-441320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441903-441953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442583-442675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444016-444144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444429-444535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446401-446557:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449358-449510:1:exon

COX14
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: COX14
note: COX14, cytochrome c oxidase assembly factor; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(451400..451752)
location: region:451400-451752:-1
so has part: feature:451400-451752:-1:exon
subclass of: SO_0000010

426880
type: Gene
SIO_000068: ncbigene

position:451400:-1
position: 451400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451752:-1
position: 451752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451400-451752:-1:exon

COX14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: COX14
product: COX14, cytochrome c oxidase assembly factor
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001302157.2
SIO_010081: COX14
subclass of: SO_0000673
so part of: COX14
location: complement(join(451400..451648,451715..451752))
location: region:451400-451752:-1
so has part: feature:451715-451752:-1:exon
so has part: feature:451400-451648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451715-451752:-1:exon

position:451715:-1
position: 451715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451400-451648:-1:exon

position:451648:-1
position: 451648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COX14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: COX14
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cytochrome c oxidase assembly homolog 14
translation: MVSGKQLADFGYKAFSGSMMLLTVYGGYLCGVRAYRLLQNRRARQASAGPES
SIO_010081: COX14
subclass of: SO_0000673
so part of: COX14
location: complement(451482..451640)
location: region:451482-451640:-1
so has part: feature:451482-451640:-1:exon

NP_001289086.1
type: Protein
SIO_000068: ncbiprotein

position:451482:-1
position: 451482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451640:-1
position: 451640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451482-451640:-1:exon

GPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: GPD1
note: glycerol-3-phosphate dehydrogenase 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(453320..458081)
location: region:453320-458081:-1
so has part: feature:453320-458081:-1:exon
subclass of: SO_0000010

426881
type: Gene
SIO_000068: ncbigene

position:453320:-1
position: 453320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458081:-1
position: 458081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453320-458081:-1:exon

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001389632.2
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(453320..454839,455009..455115,455293..455526,455806..455918,456607..456745,457119..457259,457709..457886,458018..458081))
location: region:453320-458081:-1
so has part: feature:458018-458081:-1:exon
so has part: feature:457709-457886:-1:exon
so has part: feature:457119-457259:-1:exon
so has part: feature:456607-456745:-1:exon
so has part: feature:455806-455918:-1:exon
so has part: feature:455293-455526:-1:exon
so has part: feature:455009-455115:-1:exon
so has part: feature:453320-454839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458018-458081:-1:exon

position:458018:-1
position: 458018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457709-457886:-1:exon

position:457709:-1
position: 457709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457886:-1
position: 457886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457119-457259:-1:exon

position:457119:-1
position: 457119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457259:-1
position: 457259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456607-456745:-1:exon

position:456607:-1
position: 456607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456745:-1
position: 456745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:455806-455918:-1:exon

position:455806:-1
position: 455806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455918:-1
position: 455918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:455293-455526:-1:exon

position:455293:-1
position: 455293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455526:-1
position: 455526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:455009-455115:-1:exon

position:455009:-1
position: 455009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455115:-1
position: 455115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:453320-454839:-1:exon

position:454839:-1
position: 454839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic
translation: MGGKKVCIVGSGNWGSAIAKIVGSNAARLGTFENTVNMWVLEEEVGGRRLTEIINTEHENVKYLPGHKLPPNVVAEPDLVKACSGADILLFVVPHQFIGKVCDQIKAHVKKGAIGMSLIKGVDEGPDGLRLISDIIHEKLGIEMSVLMGANIASEVAEEKFCETTIGCKNAQYGQILKELMQTPNFRVTVVQEADTVEICGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMISFAKIFCKGPVTPSTFLESCGVADLITTCYGGRNRKVAEAFAKTGKSIEQLEKEMLNGQKLQGPQTSAELNHILKTKNMVDKFPLFTAVYQICYEGKPVSDVIKCLQNHPEHM
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(454743..454839,455009..455115,455293..455526,455806..455918,456607..456745,457119..457259,457709..457886,458018..458058))
location: region:454743-458058:-1
so has part: feature:458018-458058:-1:exon
so has part: feature:457709-457886:-1:exon
so has part: feature:457119-457259:-1:exon
so has part: feature:456607-456745:-1:exon
so has part: feature:455806-455918:-1:exon
so has part: feature:455293-455526:-1:exon
so has part: feature:455009-455115:-1:exon
so has part: feature:454743-454839:-1:exon

NP_001376561.1
type: Protein
SIO_000068: ncbiprotein

position:454743:-1
position: 454743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458058:-1
position: 458058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458018-458058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457709-457886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457119-457259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456607-456745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455806-455918:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455293-455526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455009-455115:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:454743-454839:-1:exon

SMARCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(458868..465952)
location: region:458868-465952:-1
so has part: feature:458868-465952:-1:exon
subclass of: SO_0000010

426882
type: Gene
SIO_000068: ncbigene

position:458868:-1
position: 458868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465952:-1
position: 465952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458868-465952:-1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_424488.8
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(458868..460525,460749..460850,461085..461207,461541..461676,462106..462203,462316..462477,462575..462676,463007..463123,463616..463738,464010..464132,464229..464271,465438..465625,465767..465952))
location: region:458868-465952:-1
so has part: feature:465767-465952:-1:exon
so has part: feature:465438-465625:-1:exon
so has part: feature:464229-464271:-1:exon
so has part: feature:464010-464132:-1:exon
so has part: feature:463616-463738:-1:exon
so has part: feature:463007-463123:-1:exon
so has part: feature:462575-462676:-1:exon
so has part: feature:462316-462477:-1:exon
so has part: feature:462106-462203:-1:exon
so has part: feature:461541-461676:-1:exon
so has part: feature:461085-461207:-1:exon
so has part: feature:460749-460850:-1:exon
so has part: feature:458868-460525:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465767-465952:-1:exon

position:465767:-1
position: 465767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465438-465625:-1:exon

position:465438:-1
position: 465438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465625:-1
position: 465625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464229-464271:-1:exon

position:464229:-1
position: 464229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464271:-1
position: 464271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464010-464132:-1:exon

position:464010:-1
position: 464010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464132:-1
position: 464132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:463616-463738:-1:exon

position:463616:-1
position: 463616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463738:-1
position: 463738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:463007-463123:-1:exon

position:463007:-1
position: 463007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463123:-1
position: 463123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:462575-462676:-1:exon

position:462575:-1
position: 462575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462676:-1
position: 462676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:462316-462477:-1:exon

position:462316:-1
position: 462316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462477:-1
position: 462477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:462106-462203:-1:exon

position:462106:-1
position: 462106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462203:-1
position: 462203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:461541-461676:-1:exon

position:461541:-1
position: 461541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461676:-1
position: 461676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:461085-461207:-1:exon

position:461085:-1
position: 461085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461207:-1
position: 461207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:460749-460850:-1:exon

position:460749:-1
position: 460749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460850:-1
position: 460850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:458868-460525:-1:exon

position:460525:-1
position: 460525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
translation: MAARAGFQSVTPSGGGGGAAAGAGALGPGTPGGPVRMGPAPGQGLYRSPLPGAAYPRPGMLPGSRLAPQGPSMGPPGYGGSPAVRPGMAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(460472..460525,460749..460850,461085..461207,461541..461676,462106..462203,462316..462477,462575..462676,463007..463123,463616..463738,464010..464132,464229..464271,465438..465625,465767..465934))
location: region:460472-465934:-1
so has part: feature:465767-465934:-1:exon
so has part: feature:465438-465625:-1:exon
so has part: feature:464229-464271:-1:exon
so has part: feature:464010-464132:-1:exon
so has part: feature:463616-463738:-1:exon
so has part: feature:463007-463123:-1:exon
so has part: feature:462575-462676:-1:exon
so has part: feature:462316-462477:-1:exon
so has part: feature:462106-462203:-1:exon
so has part: feature:461541-461676:-1:exon
so has part: feature:461085-461207:-1:exon
so has part: feature:460749-460850:-1:exon
so has part: feature:460472-460525:-1:exon

XP_424488.3
type: Protein
SIO_000068: ncbiprotein

position:460472:-1
position: 460472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465934:-1
position: 465934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465767-465934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465438-465625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464229-464271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464010-464132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463616-463738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463007-463123:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462575-462676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462316-462477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462106-462203:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461541-461676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461085-461207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460749-460850:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460472-460525:-1:exon

ASIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: acid sensing ion channel subunit 1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(469270..486902)
location: region:469270-486902:-1
so has part: feature:469270-486902:-1:exon
subclass of: SO_0000010

426883
type: Gene
SIO_000068: ncbigene

position:469270:-1
position: 469270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486902:-1
position: 486902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469270-486902:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
product: acid sensing ion channel subunit 1, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300234.4
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(469270..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,484494..484689,485496..485889,486454..486902))
location: region:469270-486902:-1
so has part: feature:486454-486902:-1:exon
so has part: feature:485496-485889:-1:exon
so has part: feature:484494-484689:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:469270-471167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486454-486902:-1:exon

position:486454:-1
position: 486454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485496-485889:-1:exon

position:485496:-1
position: 485496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485889:-1
position: 485889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:484494-484689:-1:exon

position:484494:-1
position: 484494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484689:-1
position: 484689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:473227-473377:-1:exon

position:473227:-1
position: 473227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473377:-1
position: 473377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472705-472832:-1:exon

position:472705:-1
position: 472705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472832:-1
position: 472832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:472376-472526:-1:exon

position:472376:-1
position: 472376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472526:-1
position: 472526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:472242-472298:-1:exon

position:472242:-1
position: 472242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472298:-1
position: 472298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:472006-472159:-1:exon

position:472006:-1
position: 472006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472159:-1
position: 472159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:471839-471930:-1:exon

position:471839:-1
position: 471839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471930:-1
position: 471930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:471543-471622:-1:exon

position:471543:-1
position: 471543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471622:-1
position: 471622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:471310-471414:-1:exon

position:471310:-1
position: 471310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471414:-1
position: 471414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:469270-471167:-1:exon

position:471167:-1
position: 471167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
product: acid sensing ion channel subunit 1, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300235.4
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(469270..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,484494..484689,485496..485889,486275..486400))
location: region:469270-486400:-1
so has part: feature:486275-486400:-1:exon
so has part: feature:485496-485889:-1:exon
so has part: feature:484494-484689:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:469270-471167:-1:exon

position:486400:-1
position: 486400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486275-486400:-1:exon

position:486275:-1
position: 486275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485496-485889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484494-484689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:469270-471167:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
product: acid sensing ion channel subunit 1, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300233.4
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(469270..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,474487..475102))
location: region:469270-475102:-1
so has part: feature:474487-475102:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:469270-471167:-1:exon

position:475102:-1
position: 475102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474487-475102:-1:exon

position:474487:-1
position: 474487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:469270-471167:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
product: acid sensing ion channel subunit 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015300232.4
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(469270..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,474259..475102))
location: region:469270-475102:-1
so has part: feature:474259-475102:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:469270-471167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474259-475102:-1:exon

position:474259:-1
position: 474259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:469270-471167:-1:exon

LOC107055396
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107055396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(469270..471060)
location: region:469270-471060:-1
so has part: feature:469270-471060:-1:exon
subclass of: SO_0000010

107055396
type: Gene
SIO_000068: ncbigene

position:471060:-1
position: 471060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469270-471060:-1:exon

LOC107055396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107055396
product: WAS/WASL-interacting protein family member 3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_015300255.4
SIO_010081: LOC107055396
subclass of: SO_0000673
so part of: LOC107055396
location: complement(469270..471060)
location: region:469270-471060:-1
so has part: feature:469270-471060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469270-471060:-1:exon

LOC107055396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107055396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WAS/WASL-interacting protein family member 3
translation: MYNNPSYQSPPESCPSPRGETQPGDLARSHGRTRTRAAASDFGAGGRAGPCWLRDSRRLQPSRGATHSGPGRGPAPSPPPRLPSAFLTRNPEAKKKQPSGRRVSIHSPVRLSVRPSIVSMLILPPRPQPAPVPVPGIISEPRGPGRAPWALPHHDGPAWAPTAAPCAQNGAAPPLQNVFLGLCPGDGNVGPLGEQRGGLQTGGPLRACGLVMVWGPVMVWGSVTV
SIO_010081: LOC107055396
subclass of: SO_0000673
so part of: LOC107055396
location: complement(470374..471051)
location: region:470374-471051:-1
so has part: feature:470374-471051:-1:exon

XP_015155741.2
type: Protein
SIO_000068: ncbiprotein

position:470374:-1
position: 470374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471051:-1
position: 471051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470374-471051:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
product: acid sensing ion channel subunit 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001040467.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 5 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001040467.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(471063..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,484494..484689,485496..485866))
location: region:471063-485866:-1
so has part: feature:485496-485866:-1:exon
so has part: feature:484494-484689:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:471063-471167:-1:exon

position:471063:-1
position: 471063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485866:-1
position: 485866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485496-485866:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484494-484689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471063-471167:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: acid-sensing ion channel 1
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGISHIFSYERLSLKRVVWALCFMGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCSPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(471063..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,484494..484689,485496..485860))
location: region:471063-485860:-1
so has part: feature:485496-485860:-1:exon
so has part: feature:484494-484689:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:471063-471167:-1:exon

NP_001035557.1
type: Protein
SIO_000068: ncbiprotein

position:485860:-1
position: 485860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485496-485860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484494-484689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471063-471167:-1:exon

ASIC1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: propagated from UniProtKB/Swiss-Prot (Q1XA76.1); transmembrane region
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(485651..485722)
location: region:485651-485722:-1
so has part: feature:485651-485722:-1:exon

position:485651:-1
position: 485651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485722:-1
position: 485722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485651-485722:-1:exon

ASIC1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: Important for channel gating; propagated from UniProtKB/Swiss-Prot (Q1XA76.1); other site
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(485645..485647)
location: region:485645-485647:-1
so has part: feature:485645-485647:-1:exon

position:485645:-1
position: 485645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485647:-1
position: 485647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485645-485647:-1:exon

ASIC1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: Important for channel desensitizing; propagated from UniProtKB/Swiss-Prot (Q1XA76.1); other site
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(485621..485623)
location: region:485621-485623:-1
so has part: feature:485621-485623:-1:exon

position:485621:-1
position: 485621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485623:-1
position: 485623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485621-485623:-1:exon

ASIC1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: Important for channel gating; propagated from UniProtKB/Swiss-Prot (Q1XA76.1); other site
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(472503..472505)
location: region:472503-472505:-1
so has part: feature:472503-472505:-1:exon

position:472503:-1
position: 472503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472505:-1
position: 472505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472503-472505:-1:exon

ASIC1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:17882215, ECO:0000269|PubMed:22760635, ECO:0000269|PubMed:22842900; propagated from UniProtKB/Swiss-Prot (Q1XA76.1); glycosylation site
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(472107..472109)
location: region:472107-472109:-1
so has part: feature:472107-472109:-1:exon

position:472107:-1
position: 472107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472109:-1
position: 472109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472107-472109:-1:exon

ASIC1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:17882215, ECO:0000269|PubMed:22760635, ECO:0000269|PubMed:22842900; propagated from UniProtKB/Swiss-Prot (Q1XA76.1); glycosylation site
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(472026..472028)
location: region:472026-472028:-1
so has part: feature:472026-472028:-1:exon

position:472026:-1
position: 472026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472028:-1
position: 472028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472026-472028:-1:exon

ASIC1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: propagated from UniProtKB/Swiss-Prot (Q1XA76.1); transmembrane region
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(471558..471622,471839..471854))
location: region:471558-471854:-1
so has part: feature:471839-471854:-1:exon
so has part: feature:471558-471622:-1:exon

position:471558:-1
position: 471558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471854:-1
position: 471854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471839-471854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471558-471622:-1:exon

ASIC1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: propagated from UniProtKB/Swiss-Prot (Q1XA76.1); Region: Selectivity filter. /evidence=ECO:0000305
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(471582..471590)
location: region:471582-471590:-1
so has part: feature:471582-471590:-1:exon

position:471582:-1
position: 471582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471590:-1
position: 471590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471582-471590:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X3
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGISHIFSYERLSLKRVVWALCFMGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCSPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(471063..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,484494..484689,485496..485860))
location: region:471063-485860:-1
so has part: feature:485496-485860:-1:exon
so has part: feature:484494-484689:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:471063-471167:-1:exon

XP_015155720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485496-485860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484494-484689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471063-471167:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X3
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGISHIFSYERLSLKRVVWALCFMGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCSPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(471063..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,484494..484689,485496..485860))
location: region:471063-485860:-1
so has part: feature:485496-485860:-1:exon
so has part: feature:484494-484689:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:471063-471167:-1:exon

XP_015155721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485496-485860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484494-484689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471063-471167:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MPLQIFCTISFSNEEAPRDATAAGRGENGADEFLYGQEEEEEEEEDAGAATDFVAFASSCTLHGLSHIFVEGSLGARQALWAVAFLLSLSVFLYQVADRIVYYLEYHHVTLLSEEDSPEMTFPAVTFCNINRVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(471063..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,474487..474882))
location: region:471063-474882:-1
so has part: feature:474487-474882:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:471063-471167:-1:exon

XP_015155719.3
type: Protein
SIO_000068: ncbiprotein

position:474882:-1
position: 474882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474487-474882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471063-471167:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: ACCN2
gene: ASIC1
gene synonym: ACCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X1
translation: MPLQIFCTISFSNEEAPRDATAAGRGENGADEFLYGQEEEEEEEEDAGAATDFVAFASSCTLHGLSHIFVEGSLGARQALWAVAFLLSLSVFLYQVADRIVYYLEYHHVTLLSEEDSPEMTFPAVTFCNINRVRVSQLSHEDLLYLAPLVDYEPGMELGFVPAQFSSWDEDEPLNLHGFFNRTCHQLEDMLLSCSYQGEQCGPGDFVAVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(471063..471167,471310..471414,471543..471622,471839..471930,472006..472159,472242..472298,472376..472526,472705..472832,473227..473377,474259..474882))
location: region:471063-474882:-1
so has part: feature:474259-474882:-1:exon
so has part: feature:473227-473377:-1:exon
so has part: feature:472705-472832:-1:exon
so has part: feature:472376-472526:-1:exon
so has part: feature:472242-472298:-1:exon
so has part: feature:472006-472159:-1:exon
so has part: feature:471839-471930:-1:exon
so has part: feature:471543-471622:-1:exon
so has part: feature:471310-471414:-1:exon
so has part: feature:471063-471167:-1:exon

XP_015155718.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474259-474882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473227-473377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472705-472832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472376-472526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472242-472298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472006-472159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471839-471930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471543-471622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471310-471414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471063-471167:-1:exon

RACGAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 499458..507045
location: region:499458-507045:1
so has part: feature:499458-507045:1:exon
subclass of: SO_0000010

426884
type: Gene
SIO_000068: ncbigene

position:499458:1
position: 499458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507045:1
position: 507045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499458-507045:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040654828.2
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(499458..499775,500559..500647,501069..501271,501631..501767,501967..502036,502237..502290,502853..502930,503064..503181,503366..503496,503695..503859,504235..504330,504561..504759,505367..505472,505634..505766,505911..506046,506307..506412,506747..507045)
location: region:499458-507045:1
so has part: feature:499458-499775:1:exon
so has part: feature:500559-500647:1:exon
so has part: feature:501069-501271:1:exon
so has part: feature:501631-501767:1:exon
so has part: feature:501967-502036:1:exon
so has part: feature:502237-502290:1:exon
so has part: feature:502853-502930:1:exon
so has part: feature:503064-503181:1:exon
so has part: feature:503366-503496:1:exon
so has part: feature:503695-503859:1:exon
so has part: feature:504235-504330:1:exon
so has part: feature:504561-504759:1:exon
so has part: feature:505367-505472:1:exon
so has part: feature:505634-505766:1:exon
so has part: feature:505911-506046:1:exon
so has part: feature:506307-506412:1:exon
so has part: feature:506747-507045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499458-499775:1:exon

position:499775:1
position: 499775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500559-500647:1:exon

position:500559:1
position: 500559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500647:1
position: 500647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:501069-501271:1:exon

position:501069:1
position: 501069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501271:1
position: 501271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501631-501767:1:exon

position:501631:1
position: 501631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501767:1
position: 501767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:501967-502036:1:exon

position:501967:1
position: 501967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502036:1
position: 502036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:502237-502290:1:exon

position:502237:1
position: 502237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502290:1
position: 502290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:502853-502930:1:exon

position:502853:1
position: 502853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502930:1
position: 502930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503064-503181:1:exon

position:503064:1
position: 503064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503181:1
position: 503181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:503366-503496:1:exon

position:503366:1
position: 503366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503496:1
position: 503496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:503695-503859:1:exon

position:503695:1
position: 503695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503859:1
position: 503859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:504235-504330:1:exon

position:504235:1
position: 504235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504330:1
position: 504330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:504561-504759:1:exon

position:504561:1
position: 504561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504759:1
position: 504759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505367-505472:1:exon

position:505367:1
position: 505367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505472:1
position: 505472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:505634-505766:1:exon

position:505634:1
position: 505634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505766:1
position: 505766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:505911-506046:1:exon

position:505911:1
position: 505911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506046:1
position: 506046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:506307-506412:1:exon

position:506307:1
position: 506307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506412:1
position: 506412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:506747-507045:1:exon

position:506747:1
position: 506747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904974.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(499458..499667,500559..500647,501069..501271,501631..501767,501967..502036,502237..502290,502853..502930,503064..503181,503366..503496,503695..503859,504235..504330,504561..504759,505367..505472,505634..505766,505911..506046,506307..506412,506747..507045)
location: region:499458-507045:1
so has part: feature:499458-499667:1:exon
so has part: feature:500559-500647:1:exon
so has part: feature:501069-501271:1:exon
so has part: feature:501631-501767:1:exon
so has part: feature:501967-502036:1:exon
so has part: feature:502237-502290:1:exon
so has part: feature:502853-502930:1:exon
so has part: feature:503064-503181:1:exon
so has part: feature:503366-503496:1:exon
so has part: feature:503695-503859:1:exon
so has part: feature:504235-504330:1:exon
so has part: feature:504561-504759:1:exon
so has part: feature:505367-505472:1:exon
so has part: feature:505634-505766:1:exon
so has part: feature:505911-506046:1:exon
so has part: feature:506307-506412:1:exon
so has part: feature:506747-507045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499458-499667:1:exon

position:499667:1
position: 499667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500559-500647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501069-501271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501631-501767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501967-502036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502237-502290:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502853-502930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503064-503181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503366-503496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503695-503859:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504235-504330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504561-504759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505367-505472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505634-505766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505911-506046:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506307-506412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506747-507045:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145591.3
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(499458..499512,500559..500647,501069..501271,501631..501767,501967..502036,502237..502290,502853..502930,503064..503181,503366..503496,503695..503859,504235..504330,504561..504759,505367..505472,505634..505766,505911..506046,506307..506412,506747..507045)
location: region:499458-507045:1
so has part: feature:499458-499512:1:exon
so has part: feature:500559-500647:1:exon
so has part: feature:501069-501271:1:exon
so has part: feature:501631-501767:1:exon
so has part: feature:501967-502036:1:exon
so has part: feature:502237-502290:1:exon
so has part: feature:502853-502930:1:exon
so has part: feature:503064-503181:1:exon
so has part: feature:503366-503496:1:exon
so has part: feature:503695-503859:1:exon
so has part: feature:504235-504330:1:exon
so has part: feature:504561-504759:1:exon
so has part: feature:505367-505472:1:exon
so has part: feature:505634-505766:1:exon
so has part: feature:505911-506046:1:exon
so has part: feature:506307-506412:1:exon
so has part: feature:506747-507045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499458-499512:1:exon

position:499512:1
position: 499512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500559-500647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501069-501271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501631-501767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501967-502036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502237-502290:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502853-502930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503064-503181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503366-503496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503695-503859:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504235-504330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504561-504759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505367-505472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505634-505766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505911-506046:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506307-506412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506747-507045:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_004949732.5
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(499458..499484,500559..500647,501069..501271,501631..501767,501967..502036,502237..502290,502853..502930,503064..503181,503366..503496,503695..503859,504235..504330,504561..504759,505367..505472,505634..505766,505911..506046,506307..506412,506747..507045)
location: region:499458-507045:1
so has part: feature:499458-499484:1:exon
so has part: feature:500559-500647:1:exon
so has part: feature:501069-501271:1:exon
so has part: feature:501631-501767:1:exon
so has part: feature:501967-502036:1:exon
so has part: feature:502237-502290:1:exon
so has part: feature:502853-502930:1:exon
so has part: feature:503064-503181:1:exon
so has part: feature:503366-503496:1:exon
so has part: feature:503695-503859:1:exon
so has part: feature:504235-504330:1:exon
so has part: feature:504561-504759:1:exon
so has part: feature:505367-505472:1:exon
so has part: feature:505634-505766:1:exon
so has part: feature:505911-506046:1:exon
so has part: feature:506307-506412:1:exon
so has part: feature:506747-507045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499458-499484:1:exon

position:499484:1
position: 499484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500559-500647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501069-501271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501631-501767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501967-502036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502237-502290:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502853-502930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503064-503181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503366-503496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503695-503859:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504235-504330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504561-504759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505367-505472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505634-505766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505911-506046:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506307-506412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506747-507045:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025145590.3
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(499667..500160,500559..500647,501069..501271,501631..501767,501967..502036,502237..502290,502853..502930,503064..503181,503366..503496,503695..503859,504235..504330,504561..504759,505367..505472,505634..505766,505911..506046,506307..506412,506747..507045)
location: region:499667-507045:1
so has part: feature:499667-500160:1:exon
so has part: feature:500559-500647:1:exon
so has part: feature:501069-501271:1:exon
so has part: feature:501631-501767:1:exon
so has part: feature:501967-502036:1:exon
so has part: feature:502237-502290:1:exon
so has part: feature:502853-502930:1:exon
so has part: feature:503064-503181:1:exon
so has part: feature:503366-503496:1:exon
so has part: feature:503695-503859:1:exon
so has part: feature:504235-504330:1:exon
so has part: feature:504561-504759:1:exon
so has part: feature:505367-505472:1:exon
so has part: feature:505634-505766:1:exon
so has part: feature:505911-506046:1:exon
so has part: feature:506307-506412:1:exon
so has part: feature:506747-507045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499667-500160:1:exon

position:500160:1
position: 500160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500559-500647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501069-501271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501631-501767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501967-502036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502237-502290:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502853-502930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503064-503181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503366-503496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503695-503859:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504235-504330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504561-504759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505367-505472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505634-505766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505911-506046:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506307-506412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506747-507045:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1 isoform X2
translation: MQLNLKRRMDTTVRNLWNLCDQLIRQAEVLSEGNEYQFIQLAKNFEDYRRKWQKTEQELGRYKDLLMKSEAERSALDVKLKHARNQVDVEIKRRQKAEADCEKLERQIQLIRELLMCDASGSIQLSEEQKSALAFLNRPQVSVGGSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSAVKAVRLKRREKRRSSRQYVEGPPAPEKKIRSIGSTADQGNESIVAKTTLMVPSDGGPIEAISTIQTVPYSLRSQRKSGPLQPWSSETSLGSKQVESKPESNVSSTPQSNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCHVVSHPECRDRCPLPCIPTLTGPPVKIGEGTLMDFVPSAPPMIPSIIVHCVNEIEQRGLHEKGLYRISGCDKTVRELKEKFLRSKNIPSLSNVDDIHAICGLLKDFLRNLKEPLLTFRLNKTFMEAAEILDEDNSIAAMYQAVGELPRANRDTLAFLMVHLQRVAQSPDTKMDVTNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMEYWSQLMMVEQENIDPVHVIENTNAYSTPQTPDVKECIFEPLTTPERQMYRRLSSSSLCQRVLSTFSMTPKTASKSKSTTQLRRQGKFFASPVLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(500141..500160,500559..500647,501069..501271,501631..501767,501967..502036,502237..502290,502853..502930,503064..503181,503366..503496,503695..503859,504235..504330,504561..504759,505367..505472,505634..505766,505911..506046,506307..506412,506747..506822)
location: region:500141-506822:1
so has part: feature:500141-500160:1:exon
so has part: feature:500559-500647:1:exon
so has part: feature:501069-501271:1:exon
so has part: feature:501631-501767:1:exon
so has part: feature:501967-502036:1:exon
so has part: feature:502237-502290:1:exon
so has part: feature:502853-502930:1:exon
so has part: feature:503064-503181:1:exon
so has part: feature:503366-503496:1:exon
so has part: feature:503695-503859:1:exon
so has part: feature:504235-504330:1:exon
so has part: feature:504561-504759:1:exon
so has part: feature:505367-505472:1:exon
so has part: feature:505634-505766:1:exon
so has part: feature:505911-506046:1:exon
so has part: feature:506307-506412:1:exon
so has part: feature:506747-506822:1:exon

XP_025001358.2
type: Protein
SIO_000068: ncbiprotein

position:500141:1
position: 500141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506822:1
position: 506822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500141-500160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:500559-500647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501069-501271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501631-501767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501967-502036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502237-502290:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502853-502930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503064-503181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503366-503496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503695-503859:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504235-504330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504561-504759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505367-505472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505634-505766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505911-506046:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506307-506412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506747-506822:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040654827.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(500201..500291,500559..500647,501069..501271,501631..501767,501967..502036,502237..502290,502853..502930,503064..503181,503366..503496,503695..503859,504235..504330,504561..504759,505367..505472,505634..505766,505911..506046,506307..506412,506747..507045)
location: region:500201-507045:1
so has part: feature:500201-500291:1:exon
so has part: feature:500559-500647:1:exon
so has part: feature:501069-501271:1:exon
so has part: feature:501631-501767:1:exon
so has part: feature:501967-502036:1:exon
so has part: feature:502237-502290:1:exon
so has part: feature:502853-502930:1:exon
so has part: feature:503064-503181:1:exon
so has part: feature:503366-503496:1:exon
so has part: feature:503695-503859:1:exon
so has part: feature:504235-504330:1:exon
so has part: feature:504561-504759:1:exon
so has part: feature:505367-505472:1:exon
so has part: feature:505634-505766:1:exon
so has part: feature:505911-506046:1:exon
so has part: feature:506307-506412:1:exon
so has part: feature:506747-507045:1:exon

position:500201:1
position: 500201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500201-500291:1:exon

position:500291:1
position: 500291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500559-500647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501069-501271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501631-501767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501967-502036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502237-502290:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502853-502930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503064-503181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503366-503496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503695-503859:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504235-504330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504561-504759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505367-505472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505634-505766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505911-506046:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506307-506412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506747-507045:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1 isoform X1
translation: MDTTVRNLWNLCDQLIRQAEVLSEGNEYQFIQLAKNFEDYRRKWQKTEQELGRYKDLLMKSEAERSALDVKLKHARNQVDVEIKRRQKAEADCEKLERQIQLIRELLMCDASGSIQLSEEQKSALAFLNRPQVSVGGSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSAVKAVRLKRREKRRSSRQYVEGPPAPEKKIRSIGSTADQGNESIVAKTTLMVPSDGGPIEAISTIQTVPYSLRSQRKSGPLQPWSSETSLGSKQVESKPESNVSSTPQSNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCHVVSHPECRDRCPLPCIPTLTGPPVKIGEGTLMDFVPSAPPMIPSIIVHCVNEIEQRGLHEKGLYRISGCDKTVRELKEKFLRSKNIPSLSNVDDIHAICGLLKDFLRNLKEPLLTFRLNKTFMEAAEILDEDNSIAAMYQAVGELPRANRDTLAFLMVHLQRVAQSPDTKMDVTNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMEYWSQLMMVEQENIDPVHVIENTNAYSTPQTPDVKECIFEPLTTPERQMYRRLSSSSLCQRVLSTFSMTPKTASKSKSTTQLRRQGKFFASPVLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(500563..500647,501069..501271,501631..501767,501967..502036,502237..502290,502853..502930,503064..503181,503366..503496,503695..503859,504235..504330,504561..504759,505367..505472,505634..505766,505911..506046,506307..506412,506747..506822)
location: region:500563-506822:1
so has part: feature:500563-500647:1:exon
so has part: feature:501069-501271:1:exon
so has part: feature:501631-501767:1:exon
so has part: feature:501967-502036:1:exon
so has part: feature:502237-502290:1:exon
so has part: feature:502853-502930:1:exon
so has part: feature:503064-503181:1:exon
so has part: feature:503366-503496:1:exon
so has part: feature:503695-503859:1:exon
so has part: feature:504235-504330:1:exon
so has part: feature:504561-504759:1:exon
so has part: feature:505367-505472:1:exon
so has part: feature:505634-505766:1:exon
so has part: feature:505911-506046:1:exon
so has part: feature:506307-506412:1:exon
so has part: feature:506747-506822:1:exon

XP_025001359.2
type: Protein
SIO_000068: ncbiprotein

position:500563:1
position: 500563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500563-500647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501069-501271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501631-501767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501967-502036:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502237-502290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502853-502930:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503064-503181:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503366-503496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503695-503859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504235-504330:1:exon