Gallus gallus isolate bGalGal1 chromosome 25, bGalGal1.mat.broiler.GRCg7b, whole genome shotgun sequence.
type: Entry
definition: Gallus gallus isolate bGalGal1 chromosome 25, bGalGal1.mat.broiler.GRCg7b, whole genome shotgun sequence.
sequence version: NC_052556.1
sequence date: 2022-03-01
sequence: sequence
division: CON
label: NC_052556.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA698609
dblink: SAMN15960293
keyword: WGS
keyword: RefSeq
source: Gallus gallus (chicken)
organism: Gallus gallus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM028506.1.\nAssembly name: bGalGal1.mat.broiler.GRCg7b\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/01/19. The original whole-genome shotgun project has the\naccession JAENSK000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 22-JUL-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n SMRTLink7.0.1; Freebayes v. 1.3.1; gEVAL\n manual curation v. 2020-07-22; VGP trio\n assembly pipeline v. 1.6\nAssembly Name :: bGalGal1.mat.broiler.GRCg7b\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 102.01x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Gallus gallus Annotation Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3067737
topology: linear
so has quality: SO_0000987
location: 1..3067737
location: region:1-3067737:1
RO_0002162: 9031

NC_052556
type: RefSeq
SIO_000068: refseq

PRJNA698609
type: BioProject
SIO_000068: bioproject

SAMN15960293
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067737:1
position: 3067737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3067737:1:source
so part of: sequence
organism: Gallus gallus
mol type: genomic DNA
isolate: bGalGal1
chromosome: 25
sex: female
tissue type: blood
country: USA: Fayetteville
lat lon: 36.0822 N 94.1719 W
collection date: 20-May-2019
collected by: Nick Anthony

9031
type: Taxonomy
SIO_000068: taxonomy

BGLAP
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: BGP
gene: BGLAP
gene synonym: BGP
note: bone gamma-carboxyglutamate protein; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1097..2674
location: region:1097-2674:1
so has part: feature:1097-2674:1:exon
subclass of: SO_0000010

396348
type: Gene
SIO_000068: ncbigene

position:1097:1
position: 1097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2674:1
position: 2674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1097-2674:1:exon

BGLAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: BGP
gene: BGLAP
gene synonym: BGP
product: bone gamma-carboxyglutamate protein
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_205387.4
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: join(1097..1475,2115..2147,2247..2313,2429..2674)
location: region:1097-2674:1
so has part: feature:1097-1475:1:exon
so has part: feature:2115-2147:1:exon
so has part: feature:2247-2313:1:exon
so has part: feature:2429-2674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1097-1475:1:exon

position:1475:1
position: 1475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2115-2147:1:exon

position:2115:1
position: 2115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147:1
position: 2147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2247-2313:1:exon

position:2247:1
position: 2247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313:1
position: 2313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2429-2674:1:exon

position:2429:1
position: 2429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BGLAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: BGP
gene: BGLAP
gene synonym: BGP
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: osteocalcin preproprotein
translation: MKAAALLLLAALLTFSLCRSAPDGSDARSAKAFISHRASAEMVRRQKRHYAQDSGVAGAPPNPLEAQREVCELSPDCDELADQIGFQEAYRRFYGPV
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: join(1415..1475,2115..2147,2247..2313,2429..2561)
location: region:1415-2561:1
so has part: feature:1415-1475:1:exon
so has part: feature:2115-2147:1:exon
so has part: feature:2247-2313:1:exon
so has part: feature:2429-2561:1:exon

NP_990718.2
type: Protein
SIO_000068: ncbiprotein

position:1415:1
position: 1415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2561:1
position: 2561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415-1475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2115-2147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2247-2313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2429-2561:1:exon

BGLAP
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9031
alternative label: BGP
gene: BGLAP
gene synonym: BGP
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: 1415..1474
location: region:1415-1474:1
so has part: feature:1415-1474:1:exon

position:1474:1
position: 1474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415-1474:1:exon

SMG5
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4804..25034)
location: region:4804-25034:-1
so has part: feature:4804-25034:-1:exon
subclass of: SO_0000010

425473
type: Gene
SIO_000068: ncbigene

position:4804:-1
position: 4804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25034:-1
position: 25034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4804-25034:-1:exon

SMG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SMG5
product: SMG5, nonsense mediated mRNA decay factor, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons
transcript id: XM_015298318.4
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: complement(join(4804..5033,5612..5713,5931..6070,6543..6617,6917..7007,7099..7260,7868..7927,8017..8175,8744..8919,9350..9425,9574..9744,11727..12428,12974..13111,13226..13434,14188..14256,14669..14794,15015..15093,15670..15759,18407..18496,19594..19750,20811..20934,21011..21109,24862..25034))
location: region:4804-25034:-1
so has part: feature:24862-25034:-1:exon
so has part: feature:21011-21109:-1:exon
so has part: feature:20811-20934:-1:exon
so has part: feature:19594-19750:-1:exon
so has part: feature:18407-18496:-1:exon
so has part: feature:15670-15759:-1:exon
so has part: feature:15015-15093:-1:exon
so has part: feature:14669-14794:-1:exon
so has part: feature:14188-14256:-1:exon
so has part: feature:13226-13434:-1:exon
so has part: feature:12974-13111:-1:exon
so has part: feature:11727-12428:-1:exon
so has part: feature:9574-9744:-1:exon
so has part: feature:9350-9425:-1:exon
so has part: feature:8744-8919:-1:exon
so has part: feature:8017-8175:-1:exon
so has part: feature:7868-7927:-1:exon
so has part: feature:7099-7260:-1:exon
so has part: feature:6917-7007:-1:exon
so has part: feature:6543-6617:-1:exon
so has part: feature:5931-6070:-1:exon
so has part: feature:5612-5713:-1:exon
so has part: feature:4804-5033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24862-25034:-1:exon

position:24862:-1
position: 24862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21011-21109:-1:exon

position:21011:-1
position: 21011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21109:-1
position: 21109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:20811-20934:-1:exon

position:20811:-1
position: 20811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20934:-1
position: 20934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19594-19750:-1:exon

position:19594:-1
position: 19594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19750:-1
position: 19750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18407-18496:-1:exon

position:18407:-1
position: 18407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18496:-1
position: 18496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15670-15759:-1:exon

position:15670:-1
position: 15670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15759:-1
position: 15759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15015-15093:-1:exon

position:15015:-1
position: 15015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15093:-1
position: 15093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14669-14794:-1:exon

position:14669:-1
position: 14669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14794:-1
position: 14794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14188-14256:-1:exon

position:14188:-1
position: 14188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14256:-1
position: 14256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13226-13434:-1:exon

position:13226:-1
position: 13226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13434:-1
position: 13434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12974-13111:-1:exon

position:12974:-1
position: 12974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13111:-1
position: 13111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11727-12428:-1:exon

position:11727:-1
position: 11727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12428:-1
position: 12428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9574-9744:-1:exon

position:9574:-1
position: 9574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9744:-1
position: 9744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9350-9425:-1:exon

position:9350:-1
position: 9350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9425:-1
position: 9425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8744-8919:-1:exon

position:8744:-1
position: 8744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8919:-1
position: 8919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8017-8175:-1:exon

position:8017:-1
position: 8017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8175:-1
position: 8175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7868-7927:-1:exon

position:7868:-1
position: 7868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7927:-1
position: 7927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7099-7260:-1:exon

position:7099:-1
position: 7099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7260:-1
position: 7260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6917-7007:-1:exon

position:6917:-1
position: 6917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7007:-1
position: 7007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6543-6617:-1:exon

position:6543:-1
position: 6543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6617:-1
position: 6617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5931-6070:-1:exon

position:5931:-1
position: 5931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6070:-1
position: 6070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5612-5713:-1:exon

position:5612:-1
position: 5612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5713:-1
position: 5713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4804-5033:-1:exon

position:5033:-1
position: 5033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SMG5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein SMG5 isoform X1
translation: MSQGGGTGSESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSALECAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLMGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGASGNLKRLYDKAAKMYQQLKKCESRKLSPSKKRCKDIKRLLVSFMYLQSLLQPKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSVSEDEEEYESGYSFLPDLLIFRMVIICFMSVHSLRRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFRSDGTDEPEPREPLSSMEKEGEAELPNHHPREEERKHDCKKSKKYSRLSCLRRRRHPQKADESDLSEGFDSDSSQGSTKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGKEGGERGRSGAGEALKNGVDGGGSGECKNMSSSKTESADPAVNGPTSLSASDASIASNLQAMSTQLFQTKRCFRLAPTFSNILLKPSGEQPASKAGLEGKPCINGDVEKPGLAEQDNVSDSEESVLSTKSCRNERSLQEKLEIVSNEGLLLTVKVFLDWLRTNTDFIIMCAQSSQSLWNRLSVLLNLLPSAADLQDSGLELCKEVREVLSGAELPELRANLLLPEDVALRNLPPLRNAHRRLNFEQDRPIFSALEESVVRICCIRSFGHFVTRLQGSILQFNPELGIFISIAQSERDSVVQQAQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVLDAQALCQHLAVVKQLAGSGRFIIIIPRAVIDSLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQRDVGKSFERHKLKRQDLDAWNLYKILDSCKQLTLSQSSGDDDTTGMVTIITGFQLEDPGVLSAPMQSAIQAAAGASVEVKNILEFYKQWKEMG
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: complement(join(5630..5713,5931..6070,6543..6617,6917..7007,7099..7260,7868..7927,8017..8175,8744..8919,9350..9425,9574..9744,11727..12428,12974..13111,13226..13434,14188..14256,14669..14794,15015..15093,15670..15759,18407..18496,19594..19750,20811..20934,21011..21109,24862..24938))
location: region:5630-24938:-1
so has part: feature:24862-24938:-1:exon
so has part: feature:21011-21109:-1:exon
so has part: feature:20811-20934:-1:exon
so has part: feature:19594-19750:-1:exon
so has part: feature:18407-18496:-1:exon
so has part: feature:15670-15759:-1:exon
so has part: feature:15015-15093:-1:exon
so has part: feature:14669-14794:-1:exon
so has part: feature:14188-14256:-1:exon
so has part: feature:13226-13434:-1:exon
so has part: feature:12974-13111:-1:exon
so has part: feature:11727-12428:-1:exon
so has part: feature:9574-9744:-1:exon
so has part: feature:9350-9425:-1:exon
so has part: feature:8744-8919:-1:exon
so has part: feature:8017-8175:-1:exon
so has part: feature:7868-7927:-1:exon
so has part: feature:7099-7260:-1:exon
so has part: feature:6917-7007:-1:exon
so has part: feature:6543-6617:-1:exon
so has part: feature:5931-6070:-1:exon
so has part: feature:5630-5713:-1:exon

XP_015153804.2
type: Protein
SIO_000068: ncbiprotein

position:5630:-1
position: 5630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24938:-1
position: 24938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24862-24938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21011-21109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20811-20934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19594-19750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18407-18496:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15670-15759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15015-15093:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14669-14794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14188-14256:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13226-13434:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12974-13111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11727-12428:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9574-9744:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9350-9425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8744-8919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8017-8175:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7868-7927:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7099-7260:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6917-7007:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6543-6617:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5931-6070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5630-5713:-1:exon

TMEM79
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 25716..28145
location: region:25716-28145:1
so has part: feature:25716-28145:1:exon
subclass of: SO_0000010

426758
type: Gene
SIO_000068: ncbigene

position:25716:1
position: 25716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28145:1
position: 28145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25716-28145:1:exon

TMEM79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: TMEM79
product: transmembrane protein 79
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652455.2
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: join(25716..25773,26386..27221,27369..27582,27765..28145)
location: region:25716-28145:1
so has part: feature:25716-25773:1:exon
so has part: feature:26386-27221:1:exon
so has part: feature:27369-27582:1:exon
so has part: feature:27765-28145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25716-25773:1:exon

position:25773:1
position: 25773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26386-27221:1:exon

position:26386:1
position: 26386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27221:1
position: 27221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27369-27582:1:exon

position:27369:1
position: 27369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27582:1
position: 27582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27765-28145:1:exon

position:27765:1
position: 27765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79
translation: MAAADPTLPPEEVALLELGKAAPPDEDPPAPDDGRGDPDATLLWDQRQHGTQGQPEPTDTKRRSRPEGAHDDPEEGTPACPPPEADGEEDPGLPVMADHVFVPIDLHCIERTPAEQRKQQPTPQPQEEGRGGCAPPRDRPNSILPKQAFLPGGPSLYRGLLGFERQAAKLPAEGPRCPCAEVCSTAALKAVASVVGALFLCPCLIYGAYVFLPFDAPLLPTISTRLVYTLRCAAFATVPIVLGMIISGISRLCSAALEPFGKLQREVEIHRTYVSQSVHLFILYFFNMAVLATYLQQELLKLIPLLTGLFAISRLTYWLSYAFGRSFRAFGFAMTFLPLVAMLLWNLYSMFVLEPENLLAVATAKPEESSQQSRARLRYWG
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: join(26495..27221,27369..27582,27765..27969)
location: region:26495-27969:1
so has part: feature:26495-27221:1:exon
so has part: feature:27369-27582:1:exon
so has part: feature:27765-27969:1:exon

XP_040508389.1
type: Protein
SIO_000068: ncbiprotein

position:26495:1
position: 26495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27969:1
position: 27969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26495-27221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27369-27582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27765-27969:1:exon

GLMP
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: GLMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28595..32771)
location: region:28595-32771:-1
so has part: feature:28595-32771:-1:exon
subclass of: SO_0000010

777136
type: Gene
SIO_000068: ncbigene

position:28595:-1
position: 28595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32771:-1
position: 32771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28595-32771:-1:exon

GLMP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: GLMP
product: glycosylated lysosomal membrane protein
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298320.4
SIO_010081: GLMP
subclass of: SO_0000673
so part of: GLMP
location: complement(join(28595..29258,29550..29827,29909..30127,30234..30416,31719..31976,32690..32771))
location: region:28595-32771:-1
so has part: feature:32690-32771:-1:exon
so has part: feature:31719-31976:-1:exon
so has part: feature:30234-30416:-1:exon
so has part: feature:29909-30127:-1:exon
so has part: feature:29550-29827:-1:exon
so has part: feature:28595-29258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32690-32771:-1:exon

position:32690:-1
position: 32690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31719-31976:-1:exon

position:31719:-1
position: 31719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31976:-1
position: 31976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30234-30416:-1:exon

position:30234:-1
position: 30234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30416:-1
position: 30416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29909-30127:-1:exon

position:29909:-1
position: 29909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30127:-1
position: 30127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:29550-29827:-1:exon

position:29550:-1
position: 29550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29827:-1
position: 29827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:28595-29258:-1:exon

position:29258:-1
position: 29258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLMP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: GLMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosylated lysosomal membrane protein
translation: MAAPALGALLLLGAAAVGGREVSMQYNPGWNGSSVNVLHVRAVGRSDALHYVWSTIGAPSVLLVATRSPDSALSIDWGRLLSPAPTGAVWIDPPGSVVYAAAVVFTKLFEYSNANASEEVFYPTYDLSDFSWDSINRTMNHTALTAELRGVPTSDSSGSFSNGSLAFRVTAYESGGRDGALPGLLHTANSSKVEFVLAGAAPRGNGSRFVLEVATVEERGAASRLRSVRSIDDEYTPTIFETLSLVAESPNDSSPLSFLQWKATAYGSQHPTRGDGIRCRAGGLRAAGGTRPPSAIVRAYFGDGAGSAYSVSAINVSFGGEDGGAYQERRYLSWSALLGFGLPPEDAFSPLIVSIVAAALGAPLLLLLLGAAALLCARRRPYSEYEPIN
SIO_010081: GLMP
subclass of: SO_0000673
so part of: GLMP
location: complement(join(29090..29258,29550..29827,29909..30127,30234..30416,31719..31976,32690..32752))
location: region:29090-32752:-1
so has part: feature:32690-32752:-1:exon
so has part: feature:31719-31976:-1:exon
so has part: feature:30234-30416:-1:exon
so has part: feature:29909-30127:-1:exon
so has part: feature:29550-29827:-1:exon
so has part: feature:29090-29258:-1:exon

XP_015153806.3
type: Protein
SIO_000068: ncbiprotein

position:29090:-1
position: 29090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32752:-1
position: 32752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32690-32752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31719-31976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30234-30416:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29909-30127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29550-29827:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:29090-29258:-1:exon

CCT3
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(33192..43644)
location: region:33192-43644:-1
so has part: feature:33192-43644:-1:exon
subclass of: SO_0000010

425644
type: Gene
SIO_000068: ncbigene

position:33192:-1
position: 33192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43644:-1
position: 43644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33192-43644:-1:exon

CCT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: CCT3
product: chaperonin containing TCP1 subunit 3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298317.4
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: complement(join(33192..33541,33828..33959,34789..35034,35737..35917,36008..36089,36207..36339,36482..36631,38182..38368,39726..39843,40157..40253,40956..41018,41109..41159,42436..42497,43527..43644))
location: region:33192-43644:-1
so has part: feature:43527-43644:-1:exon
so has part: feature:42436-42497:-1:exon
so has part: feature:41109-41159:-1:exon
so has part: feature:40956-41018:-1:exon
so has part: feature:40157-40253:-1:exon
so has part: feature:39726-39843:-1:exon
so has part: feature:38182-38368:-1:exon
so has part: feature:36482-36631:-1:exon
so has part: feature:36207-36339:-1:exon
so has part: feature:36008-36089:-1:exon
so has part: feature:35737-35917:-1:exon
so has part: feature:34789-35034:-1:exon
so has part: feature:33828-33959:-1:exon
so has part: feature:33192-33541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43527-43644:-1:exon

position:43527:-1
position: 43527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42436-42497:-1:exon

position:42436:-1
position: 42436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42497:-1
position: 42497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41109-41159:-1:exon

position:41109:-1
position: 41109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41159:-1
position: 41159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:40956-41018:-1:exon

position:40956:-1
position: 40956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41018:-1
position: 41018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40157-40253:-1:exon

position:40157:-1
position: 40157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40253:-1
position: 40253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39726-39843:-1:exon

position:39726:-1
position: 39726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39843:-1
position: 39843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:38182-38368:-1:exon

position:38182:-1
position: 38182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38368:-1
position: 38368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:36482-36631:-1:exon

position:36482:-1
position: 36482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36631:-1
position: 36631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:36207-36339:-1:exon

position:36207:-1
position: 36207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36339:-1
position: 36339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:36008-36089:-1:exon

position:36008:-1
position: 36008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36089:-1
position: 36089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:35737-35917:-1:exon

position:35737:-1
position: 35737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35917:-1
position: 35917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:34789-35034:-1:exon

position:34789:-1
position: 34789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35034:-1
position: 35034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:33828-33959:-1:exon

position:33828:-1
position: 33828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33959:-1
position: 33959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:33192-33541:-1:exon

position:33541:-1
position: 33541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma
translation: MMGPRPVLVLSQNVKRESGRKVQAGNITAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVIIGAYRKALDDMIHVLKKISTPVDVNNREMMLKIIKSAINTKAINRWSELACSIALDAVRTVELEENGRKEIDIKKYAKVEKIPGGFSEDSCVLRGIMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEITREEDFARILQMEEEYIQQICEDLLRVKPDLVITEKGISDLAQHYLMRANISAVRRVRKTDNNRIARACGARIVSRTDELREEDVGTGAGLFEVKKIGDEYFAFITDCKEPKACTIVLRGASKEILAEVERNLQDAMQVCRNVLVDPQLVPGGGAAEMAVSHALTEKSKGMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRVLTSLRAKHTQEGSQTWGVNGESGALADMKELGVWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGEEHSKAPAPTEAAQE
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: complement(join(33437..33541,33828..33959,34789..35034,35737..35917,36008..36089,36207..36339,36482..36631,38182..38368,39726..39843,40157..40253,40956..41018,41109..41159,42436..42497,43527..43557))
location: region:33437-43557:-1
so has part: feature:43527-43557:-1:exon
so has part: feature:42436-42497:-1:exon
so has part: feature:41109-41159:-1:exon
so has part: feature:40956-41018:-1:exon
so has part: feature:40157-40253:-1:exon
so has part: feature:39726-39843:-1:exon
so has part: feature:38182-38368:-1:exon
so has part: feature:36482-36631:-1:exon
so has part: feature:36207-36339:-1:exon
so has part: feature:36008-36089:-1:exon
so has part: feature:35737-35917:-1:exon
so has part: feature:34789-35034:-1:exon
so has part: feature:33828-33959:-1:exon
so has part: feature:33437-33541:-1:exon

XP_015153803.2
type: Protein
SIO_000068: ncbiprotein

position:33437:-1
position: 33437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43557:-1
position: 43557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43527-43557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42436-42497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41109-41159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40956-41018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40157-40253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39726-39843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38182-38368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:36482-36631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:36207-36339:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:36008-36089:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:35737-35917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:34789-35034:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:33828-33959:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:33437-33541:-1:exon

LOC121107548
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121107548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 38182..40625
location: region:38182-40625:1
so has part: feature:38182-40625:1:exon
subclass of: SO_0000011

121107548
type: Gene
SIO_000068: ncbigene

position:38182:1
position: 38182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40625:1
position: 40625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38182-40625:1:exon

LOC121107548
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121107548
product: uncharacterized LOC121107548, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005841802.2
SIO_010081: LOC121107548
subclass of: SO_0000673
so part of: LOC121107548
location: join(38182..39479,39567..40625)
location: region:38182-40625:1
so has part: feature:38182-39479:1:exon
so has part: feature:39567-40625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38182-39479:1:exon

position:39479:1
position: 39479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39567-40625:1:exon

position:39567:1
position: 39567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107049500
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107049500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 44736..50749
location: region:44736-50749:1
so has part: feature:44736-50749:1:exon
subclass of: SO_0000010

107049500
type: Gene
SIO_000068: ncbigene

position:44736:1
position: 44736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50749:1
position: 50749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44736-50749:1:exon

LOC107049500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107049500
product: peroxisomal biogenesis factor 19-like
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_015273162.4
SIO_010081: LOC107049500
subclass of: SO_0000673
so part of: LOC107049500
location: join(44736..44803,45826..45939,46027..46192,47774..47859,48277..48438,49239..49415,49517..49561,50333..50749)
location: region:44736-50749:1
so has part: feature:44736-44803:1:exon
so has part: feature:45826-45939:1:exon
so has part: feature:46027-46192:1:exon
so has part: feature:47774-47859:1:exon
so has part: feature:48277-48438:1:exon
so has part: feature:49239-49415:1:exon
so has part: feature:49517-49561:1:exon
so has part: feature:50333-50749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44736-44803:1:exon

position:44803:1
position: 44803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45826-45939:1:exon

position:45826:1
position: 45826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45939:1
position: 45939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46027-46192:1:exon

position:46027:1
position: 46027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46192:1
position: 46192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47774-47859:1:exon

position:47774:1
position: 47774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47859:1
position: 47859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48277-48438:1:exon

position:48277:1
position: 48277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48438:1
position: 48438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:49239-49415:1:exon

position:49239:1
position: 49239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49415:1
position: 49415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:49517-49561:1:exon

position:49517:1
position: 49517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49561:1
position: 49561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:50333-50749:1:exon

position:50333:1
position: 50333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107049500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107049500
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: peroxisomal biogenesis factor 19
translation: MAAESGPDPELEELLESALDDFEKARPGPPAPPPTTPRSRRPQAAKKSPGAAAQESLFASQERFFQELFDGELASQASAEFERAMKELAEEEPHLVEQFQKLSEAAGRVGGDAASQQEFTSCLKETLSGLARNATDLQGSAASEEELAKAMEGLGLEEGGGEGGVLPVVQSVLQHLLSREVLYPSLKEITDKYPEWLQRHRAALPEEQYERYRAQHGVMGRICRHLEAERPEDSDGDRRARFEAVLELMQQLQELGHPPKELAGEAPPGLNLDLEGLTLPEATGEQCHVM
SIO_010081: LOC107049500
subclass of: SO_0000673
so part of: LOC107049500
location: join(44755..44803,45826..45939,46027..46192,47774..47859,48277..48438,49239..49415,49517..49561,50333..50407)
location: region:44755-50407:1
so has part: feature:44755-44803:1:exon
so has part: feature:45826-45939:1:exon
so has part: feature:46027-46192:1:exon
so has part: feature:47774-47859:1:exon
so has part: feature:48277-48438:1:exon
so has part: feature:49239-49415:1:exon
so has part: feature:49517-49561:1:exon
so has part: feature:50333-50407:1:exon

XP_015128648.3
type: Protein
SIO_000068: ncbiprotein

position:44755:1
position: 44755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50407:1
position: 50407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44755-44803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45826-45939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46027-46192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47774-47859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48277-48438:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49239-49415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49517-49561:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50333-50407:1:exon

DCAF8
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: DCAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 51974..66376
location: region:51974-66376:1
so has part: feature:51974-66376:1:exon
subclass of: SO_0000010

429253
type: Gene
SIO_000068: ncbigene

position:51974:1
position: 51974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66376:1
position: 66376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51974-66376:1:exon

DCAF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: DCAF8
product: DDB1 and CUL4 associated factor 8, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652456.2
SIO_010081: DCAF8
subclass of: SO_0000673
so part of: DCAF8
location: join(51974..52087,53589..53701,57085..57157,57438..58111,58727..58867,59088..59182,60345..60455,61834..61906,62155..62212,62294..62401,63036..63166,64889..65008,65099..65215,65301..66376)
location: region:51974-66376:1
so has part: feature:51974-52087:1:exon
so has part: feature:53589-53701:1:exon
so has part: feature:57085-57157:1:exon
so has part: feature:57438-58111:1:exon
so has part: feature:58727-58867:1:exon
so has part: feature:59088-59182:1:exon
so has part: feature:60345-60455:1:exon
so has part: feature:61834-61906:1:exon
so has part: feature:62155-62212:1:exon
so has part: feature:62294-62401:1:exon
so has part: feature:63036-63166:1:exon
so has part: feature:64889-65008:1:exon
so has part: feature:65099-65215:1:exon
so has part: feature:65301-66376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51974-52087:1:exon

position:52087:1
position: 52087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53589-53701:1:exon

position:53589:1
position: 53589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53701:1
position: 53701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57085-57157:1:exon

position:57085:1
position: 57085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57157:1
position: 57157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57438-58111:1:exon

position:57438:1
position: 57438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58111:1
position: 58111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58727-58867:1:exon

position:58727:1
position: 58727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58867:1
position: 58867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:59088-59182:1:exon

position:59088:1
position: 59088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59182:1
position: 59182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:60345-60455:1:exon

position:60345:1
position: 60345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60455:1
position: 60455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61834-61906:1:exon

position:61834:1
position: 61834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61906:1
position: 61906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:62155-62212:1:exon

position:62155:1
position: 62155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62212:1
position: 62212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:62294-62401:1:exon

position:62294:1
position: 62294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62401:1
position: 62401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63036-63166:1:exon

position:63036:1
position: 63036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63166:1
position: 63166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:64889-65008:1:exon

position:64889:1
position: 64889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65008:1
position: 65008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:65099-65215:1:exon

position:65099:1
position: 65099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65215:1
position: 65215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:65301-66376:1:exon

position:65301:1
position: 65301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCAF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: DCAF8
product: DDB1 and CUL4 associated factor 8, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273161.4
SIO_010081: DCAF8
subclass of: SO_0000673
so part of: DCAF8
location: join(51974..52087,53589..53701,57085..57157,57438..58111,58727..58867,59088..59182,60345..60455,61834..61906,62155..62212,62294..62401,63036..63166,64889..65008,65099..65215,65304..66376)
location: region:51974-66376:1
so has part: feature:51974-52087:1:exon
so has part: feature:53589-53701:1:exon
so has part: feature:57085-57157:1:exon
so has part: feature:57438-58111:1:exon
so has part: feature:58727-58867:1:exon
so has part: feature:59088-59182:1:exon
so has part: feature:60345-60455:1:exon
so has part: feature:61834-61906:1:exon
so has part: feature:62155-62212:1:exon
so has part: feature:62294-62401:1:exon
so has part: feature:63036-63166:1:exon
so has part: feature:64889-65008:1:exon
so has part: feature:65099-65215:1:exon
so has part: feature:65304-66376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51974-52087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53589-53701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57085-57157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57438-58111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58727-58867:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59088-59182:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60345-60455:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61834-61906:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:62155-62212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:62294-62401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63036-63166:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64889-65008:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:65099-65215:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:65304-66376:1:exon

position:65304:1
position: 65304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCAF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: DCAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 8 isoform X1
translation: MSDKGNSMDGKTDIANGSLSSSPEEMSAEEGREISSGIEVEASDLSLSLTGDDVGPNRTSTESRDTDTESSGEEKDSDSMDDTGHYSINEETRTLDCSHSEEEEEEDEEEEQRSHRRAQRKRANHERDSSDDEQALEDWVSSETTALPQPRWQAIRALRDRELGSSPRFVYEACGARLFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRRPVLEFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCRSTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEKKVGLYTIFVNPANTYQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGSELLASYNDEDIYLFNSSHSDGAEYIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIVQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAVTPTELTGLKEVIKKNKLERDEDSLHHTDMFDSHMLWFLMHHLRQRRHHRQRRREPGAPEADSDESPSSSDSSDEEEEGPDRVQCMPS
SIO_010081: DCAF8
subclass of: SO_0000673
so part of: DCAF8
location: join(57109..57157,57438..58111,58727..58867,59088..59182,60345..60455,61834..61906,62155..62212,62294..62401,63036..63166,64889..65008,65099..65215,65301..65417)
location: region:57109-65417:1
so has part: feature:57109-57157:1:exon
so has part: feature:57438-58111:1:exon
so has part: feature:58727-58867:1:exon
so has part: feature:59088-59182:1:exon
so has part: feature:60345-60455:1:exon
so has part: feature:61834-61906:1:exon
so has part: feature:62155-62212:1:exon
so has part: feature:62294-62401:1:exon
so has part: feature:63036-63166:1:exon
so has part: feature:64889-65008:1:exon
so has part: feature:65099-65215:1:exon
so has part: feature:65301-65417:1:exon

XP_040508390.1
type: Protein
SIO_000068: ncbiprotein

position:57109:1
position: 57109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65417:1
position: 65417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57109-57157:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57438-58111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58727-58867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59088-59182:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60345-60455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61834-61906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62155-62212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62294-62401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63036-63166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64889-65008:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65099-65215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:65301-65417:1:exon

DCAF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: DCAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 8 isoform X2
translation: MSDKGNSMDGKTDIANGSLSSSPEEMSAEEGREISSGIEVEASDLSLSLTGDDVGPNRTSTESRDTDTESSGEEKDSDSMDDTGHYSINEETRTLDCSHSEEEEEEDEEEEQRSHRRAQRKRANHERDSSDDEQALEDWVSSETTALPQPRWQAIRALRDRELGSSPRFVYEACGARLFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRRPVLEFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCRSTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEKKVGLYTIFVNPANTYQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGSELLASYNDEDIYLFNSSHSDGAEYIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIVQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAVTPTELTGLKEVIKKNKLERDEDSLHHTDMFDSHMLWFLMHHLRQRRHHRRRREPGAPEADSDESPSSSDSSDEEEEGPDRVQCMPS
SIO_010081: DCAF8
subclass of: SO_0000673
so part of: DCAF8
location: join(57109..57157,57438..58111,58727..58867,59088..59182,60345..60455,61834..61906,62155..62212,62294..62401,63036..63166,64889..65008,65099..65215,65304..65417)
location: region:57109-65417:1
so has part: feature:57109-57157:1:exon
so has part: feature:57438-58111:1:exon
so has part: feature:58727-58867:1:exon
so has part: feature:59088-59182:1:exon
so has part: feature:60345-60455:1:exon
so has part: feature:61834-61906:1:exon
so has part: feature:62155-62212:1:exon
so has part: feature:62294-62401:1:exon
so has part: feature:63036-63166:1:exon
so has part: feature:64889-65008:1:exon
so has part: feature:65099-65215:1:exon
so has part: feature:65304-65417:1:exon

XP_015128647.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57109-57157:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57438-58111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58727-58867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59088-59182:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60345-60455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61834-61906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62155-62212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62294-62401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63036-63166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64889-65008:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65099-65215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:65304-65417:1:exon

F11R
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: F11R
note: F11 receptor; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<63746..89048)
location: region:63746-89048:-1
so has part: feature:63746-89048:-1:exon
subclass of: SO_0000010

100036512
type: Gene
SIO_000068: ncbigene

position:63746:-1
position: 63746
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:89048:-1
position: 89048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63746-89048:-1:exon

F11R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: F11R
product: F11 receptor
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001083366.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 20 substitutions, 1 frameshift and aligns at 71% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001083366.1
SIO_010081: F11R
subclass of: SO_0000673
so part of: F11R
location: complement(join(<63746..>63780,<70462..>70482,<82326..82528,84672..84815,84900..85013,86452..86508,88919..89048))
location: region:63746-89048:-1
so has part: feature:88919-89048:-1:exon
so has part: feature:86452-86508:-1:exon
so has part: feature:84900-85013:-1:exon
so has part: feature:84672-84815:-1:exon
so has part: feature:82326-82528:-1:exon
so has part: feature:70462-70482:-1:exon
so has part: feature:63746-63780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88919-89048:-1:exon

position:88919:-1
position: 88919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86452-86508:-1:exon

position:86452:-1
position: 86452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86508:-1
position: 86508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84900-85013:-1:exon

position:84900:-1
position: 84900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85013:-1
position: 85013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:84672-84815:-1:exon

position:84672:-1
position: 84672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84815:-1
position: 84815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:82326-82528:-1:exon

position:82326:-1
position: 82326
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:82528:-1
position: 82528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70462-70482:-1:exon

position:70462:-1
position: 70462
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:70482:-1
position: 70482
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 7
SIO_000628: feature:63746-63780:-1:exon

position:63780:-1
position: 63780
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

F11R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: F11R
inference: similar to AA sequence (same species):RefSeq:NP_001076835.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 12 substitutions, 1 frameshift and aligns at 72% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: junctional adhesion molecule A precursor
translation: MAGGVRRGGGGARPLVLLCAAAVSLGGAQVTSETKEVPENQPVDIPCSAYRSSWTDIRIEWKFQKGSSLGLFYYGGELTDPYKNRVRFSVTSIHLTAVTREDTGKYICKVVGGGSQIAKSEVNLIVQVPPSKPTAHVPSSATIGRTAVLRCSESEGSPPPTFRWYRDSMLIPADPRSSLSFRNSSYTLDSTTGELTFNPVSAFDTGDYYCEASNNVGTAQRSDTVRMEASELNVGGVVAAVVVLLTLLGLIAFGLWFAYSRGHFQRKDTASKKVIYSQPSQRSDGDFKQTSSFLV
SIO_010081: F11R
subclass of: SO_0000673
so part of: F11R
location: complement(join(<63746..>63780,<70462..>70482,<82326..82528,84672..84815,84900..85013,86452..86508,88919..88985))
location: region:63746-88985:-1
so has part: feature:88919-88985:-1:exon
so has part: feature:86452-86508:-1:exon
so has part: feature:84900-85013:-1:exon
so has part: feature:84672-84815:-1:exon
so has part: feature:82326-82528:-1:exon
so has part: feature:70462-70482:-1:exon
so has part: feature:63746-63780:-1:exon

NP_001076835.1
type: Protein
SIO_000068: ncbiprotein

position:88985:-1
position: 88985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88919-88985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86452-86508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84900-85013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84672-84815:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82326-82528:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70462-70482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63746-63780:-1:exon

F11R
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9031
gene: F11R
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: F11R
subclass of: SO_0000673
so part of: F11R
location: complement(join(86492..86508,88919..88985))
location: region:86492-88985:-1
so has part: feature:88919-88985:-1:exon
so has part: feature:86492-86508:-1:exon

position:86492:-1
position: 86492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88919-88985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86492-86508:-1:exon

LOC107049501
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107049501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66885..74857)
location: region:66885-74857:-1
so has part: feature:66885-74857:-1:exon
subclass of: SO_0000010

107049501
type: Gene
SIO_000068: ncbigene

position:66885:-1
position: 66885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74857:-1
position: 74857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66885-74857:-1:exon

LOC107049501
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107049501
product: astrocytic phosphoprotein PEA-15-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025143050.3
SIO_010081: LOC107049501
subclass of: SO_0000673
so part of: LOC107049501
location: complement(join(66885..68638,69567..69722,71122..71295,74754..74857))
location: region:66885-74857:-1
so has part: feature:74754-74857:-1:exon
so has part: feature:71122-71295:-1:exon
so has part: feature:69567-69722:-1:exon
so has part: feature:66885-68638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74754-74857:-1:exon

position:74754:-1
position: 74754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71122-71295:-1:exon

position:71122:-1
position: 71122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71295:-1
position: 71295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69567-69722:-1:exon

position:69567:-1
position: 69567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69722:-1
position: 69722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66885-68638:-1:exon

position:68638:-1
position: 68638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107049501
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107049501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: astrocytic phosphoprotein PEA-15 isoform X1
translation: MAEYRSLLEELAQNITAEDLEQLKSACKEDIPSGEGEAIATSQHWFAFLEKHSKLDKANLSYIEHIFEISRRPDLLTMVVQYRTQVLKISEEDEVDTKLTRIPSAKKYKDIIRQPSEEEIIKLAPPPKKA
SIO_010081: LOC107049501
subclass of: SO_0000673
so part of: LOC107049501
location: complement(join(68574..68638,69567..69722,71122..71293))
location: region:68574-71293:-1
so has part: feature:71122-71293:-1:exon
so has part: feature:69567-69722:-1:exon
so has part: feature:68574-68638:-1:exon

XP_024998818.1
type: Protein
SIO_000068: ncbiprotein

position:68574:-1
position: 68574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71293:-1
position: 71293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71122-71293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69567-69722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68574-68638:-1:exon

LOC107050773
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107050773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75286..79870)
location: region:75286-79870:-1
so has part: feature:75286-79870:-1:exon
subclass of: SO_0000010

107050773
type: Gene
SIO_000068: ncbigene

position:75286:-1
position: 75286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79870:-1
position: 79870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75286-79870:-1:exon

LOC107050773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107050773
product: uncharacterized LOC107050773, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_040652458.2
SIO_010081: LOC107050773
subclass of: SO_0000673
so part of: LOC107050773
location: complement(join(75286..75506,76253..76327,76393..76493,77193..77247,77337..77382,78671..78801,78885..78958,79587..79698,79772..79870))
location: region:75286-79870:-1
so has part: feature:79772-79870:-1:exon
so has part: feature:79587-79698:-1:exon
so has part: feature:78885-78958:-1:exon
so has part: feature:78671-78801:-1:exon
so has part: feature:77337-77382:-1:exon
so has part: feature:77193-77247:-1:exon
so has part: feature:76393-76493:-1:exon
so has part: feature:76253-76327:-1:exon
so has part: feature:75286-75506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79772-79870:-1:exon

position:79772:-1
position: 79772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79587-79698:-1:exon

position:79587:-1
position: 79587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79698:-1
position: 79698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78885-78958:-1:exon

position:78885:-1
position: 78885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78958:-1
position: 78958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78671-78801:-1:exon

position:78671:-1
position: 78671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78801:-1
position: 78801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77337-77382:-1:exon

position:77337:-1
position: 77337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77382:-1
position: 77382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:77193-77247:-1:exon

position:77193:-1
position: 77193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77247:-1
position: 77247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:76393-76493:-1:exon

position:76393:-1
position: 76393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76493:-1
position: 76493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:76253-76327:-1:exon

position:76253:-1
position: 76253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76327:-1
position: 76327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:75286-75506:-1:exon

position:75506:-1
position: 75506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107050773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107050773
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: calsequestrin-1 isoform X1
translation: MTEENSIYIFKGDEMIEYDGELSADTLVEFLLDVLEDPVEFIEGDHELRAFENIEEDPKVIGYFAGGESEHFKAFSAAAAEFHPYIPFFATFDPKVARKLTLKLNEIDFYEPFMEEPLTLPAPPHGKEEIAAFVGEHKRATLRKLKPESMYETWEDDIDGIHIVAFAEEDDPDGFEFLETLKEVARDNTDNPELSIIWIDPEDFPLLIPFWEKTFGIDLSRPQIGVVNVTDADSVWLRMADEDDLPDVAELEEWIEDVLEGXINTEDDDDDDDDDADDDDGADDDD
SIO_010081: LOC107050773
subclass of: SO_0000673
so part of: LOC107050773
location: complement(join(75340..75506,76253..76327,76393..76493,77193..77247,77337..77382,78671..78801,78885..78958,79587..79698,79772..79870))
location: region:75340-79870:-1
so has part: feature:79772-79870:-1:exon
so has part: feature:79587-79698:-1:exon
so has part: feature:78885-78958:-1:exon
so has part: feature:78671-78801:-1:exon
so has part: feature:77337-77382:-1:exon
so has part: feature:77193-77247:-1:exon
so has part: feature:76393-76493:-1:exon
so has part: feature:76253-76327:-1:exon
so has part: feature:75340-75506:-1:exon

XP_040508392.1
type: Protein
SIO_000068: ncbiprotein

position:75340:-1
position: 75340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79772-79870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79587-79698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78885-78958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78671-78801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77337-77382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77193-77247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76393-76493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76253-76327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75340-75506:-1:exon

LOC121107549
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121107549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77390..78769)
location: region:77390-78769:-1
so has part: feature:77390-78769:-1:exon
subclass of: SO_0000010

121107549
type: Gene
SIO_000068: ncbigene

position:77390:-1
position: 77390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78769:-1
position: 78769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77390-78769:-1:exon

LOC121107549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107549
product: uncharacterized LOC121107549
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040652457.2
SIO_010081: LOC121107549
subclass of: SO_0000673
so part of: LOC121107549
location: complement(join(77390..78510,78562..78769))
location: region:77390-78769:-1
so has part: feature:78562-78769:-1:exon
so has part: feature:77390-78510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78562-78769:-1:exon

position:78562:-1
position: 78562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77390-78510:-1:exon

position:78510:-1
position: 78510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121107549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121107549
translation: MGRWLPWGAGCHGDQIVTGIWLPWGAGCYGELVAMETRLSQGCGCHGELVAMGSWLPWGSDCHRDMVATGSWLPWGPGCHRDMVAMGSWLLWGAGCHGDQIVAGMWLPWGAGCYGDQVVTGMWLPWGSHRDGEVAVREGGCHGDQVVTGMWLSRGGGCHGDQIVTGIWLPWGAGCHGDQILIGTWLPWGSHHNGGVAVREGGCHGDQVVTGMWLPWGSGCYGDQVVTGMWLSQGCGCHGEVVAMGSWLPWGPGCHRGVVAMGRWSSREVVAMGLPWGCGCQGDGCYGRWLPWGGDGGQWYPRGWGIPGDSGGGGGEPWG
SIO_010081: LOC121107549
subclass of: SO_0000673
so part of: LOC121107549
location: complement(join(77559..78510,78562..78569))
location: region:77559-78569:-1
so has part: feature:78562-78569:-1:exon
so has part: feature:77559-78510:-1:exon

XP_040508391.1
type: Protein
SIO_000068: ncbiprotein

position:77559:-1
position: 77559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78569:-1
position: 78569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78562-78569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77559-78510:-1:exon

USF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: USF1
note: upstream transcription factor 1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(90664..99188)
location: region:90664-99188:-1
so has part: feature:90664-99188:-1:exon
subclass of: SO_0000010

425126
type: Gene
SIO_000068: ncbigene

position:90664:-1
position: 90664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99188:-1
position: 99188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90664-99188:-1:exon

USF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: USF1
product: upstream transcription factor 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025143400.3
SIO_010081: USF1
subclass of: SO_0000673
so part of: USF1
location: complement(join(90664..91413,91494..91622,92784..92878,93015..93073,93199..93286,94415..94607,94680..94781,95634..95746,95997..96046,96238..96318,99092..99188))
location: region:90664-99188:-1
so has part: feature:99092-99188:-1:exon
so has part: feature:96238-96318:-1:exon
so has part: feature:95997-96046:-1:exon
so has part: feature:95634-95746:-1:exon
so has part: feature:94680-94781:-1:exon
so has part: feature:94415-94607:-1:exon
so has part: feature:93199-93286:-1:exon
so has part: feature:93015-93073:-1:exon
so has part: feature:92784-92878:-1:exon
so has part: feature:91494-91622:-1:exon
so has part: feature:90664-91413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99092-99188:-1:exon

position:99092:-1
position: 99092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96238-96318:-1:exon

position:96238:-1
position: 96238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96318:-1
position: 96318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95997-96046:-1:exon

position:95997:-1
position: 95997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96046:-1
position: 96046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95634-95746:-1:exon

position:95634:-1
position: 95634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95746:-1
position: 95746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94680-94781:-1:exon

position:94680:-1
position: 94680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94781:-1
position: 94781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94415-94607:-1:exon

position:94415:-1
position: 94415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94607:-1
position: 94607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93199-93286:-1:exon

position:93199:-1
position: 93199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93286:-1
position: 93286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:93015-93073:-1:exon

position:93015:-1
position: 93015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93073:-1
position: 93073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92784-92878:-1:exon

position:92784:-1
position: 92784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92878:-1
position: 92878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:91494-91622:-1:exon

position:91494:-1
position: 91494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91622:-1
position: 91622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:90664-91413:-1:exon

position:91413:-1
position: 91413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: USF1
product: upstream transcription factor 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001398141.1
SIO_010081: USF1
subclass of: SO_0000673
so part of: USF1
location: complement(join(91133..91413,91494..91622,92784..92878,93015..93073,93199..93286,94415..94607,94680..94781,95634..95752,95997..96046,96238..96318,99092..99188))
location: region:91133-99188:-1
so has part: feature:99092-99188:-1:exon
so has part: feature:96238-96318:-1:exon
so has part: feature:95997-96046:-1:exon
so has part: feature:95634-95752:-1:exon
so has part: feature:94680-94781:-1:exon
so has part: feature:94415-94607:-1:exon
so has part: feature:93199-93286:-1:exon
so has part: feature:93015-93073:-1:exon
so has part: feature:92784-92878:-1:exon
so has part: feature:91494-91622:-1:exon
so has part: feature:91133-91413:-1:exon

position:91133:-1
position: 91133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99092-99188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96238-96318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95997-96046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95634-95752:-1:exon

position:95752:-1
position: 95752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94680-94781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94415-94607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93199-93286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93015-93073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92784-92878:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91494-91622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:91133-91413:-1:exon

USF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: USF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: upstream stimulatory factor 1 isoform X1
translation: MKGQQKAAETEEGTVQIQEVATGEDPTSVAIASIQSAATFPDPNIKYVFRTENGGTQVMYRVIQVADGQLDGQTEGTSAISGYPAAQSMTQAVIQGAFTSDDAVETEATATETHYTYFPTAAVADSSTSAGAGTTATAVVTTQNSEALLGQPTPTGQFFVMMSPQEVLQGGTQRSIAPRAHPYSPKAEAPRATRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMENTKSGQSKGGILSKACDYIQELRQSNHRLSEELQGLDQLQMDNEVLRQQVEELKSKNLILRAQLRQHGVEIVIKNESH
SIO_010081: USF1
subclass of: SO_0000673
so part of: USF1
location: complement(join(91324..91413,91494..91622,92784..92878,93015..93073,93199..93286,94415..94607,94680..94781,95634..95746,95997..96046,96238..96245))
location: region:91324-96245:-1
so has part: feature:96238-96245:-1:exon
so has part: feature:95997-96046:-1:exon
so has part: feature:95634-95746:-1:exon
so has part: feature:94680-94781:-1:exon
so has part: feature:94415-94607:-1:exon
so has part: feature:93199-93286:-1:exon
so has part: feature:93015-93073:-1:exon
so has part: feature:92784-92878:-1:exon
so has part: feature:91494-91622:-1:exon
so has part: feature:91324-91413:-1:exon

XP_024999168.2
type: Protein
SIO_000068: ncbiprotein

position:91324:-1
position: 91324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96245:-1
position: 96245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96238-96245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95997-96046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95634-95746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94680-94781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94415-94607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93199-93286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93015-93073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92784-92878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91494-91622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91324-91413:-1:exon

USF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: USF1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: upstream stimulatory factor 1
translation: MKGQQKAAETEEGTVQIQEGAVATGEDPTSVAIASIQSAATFPDPNIKYVFRTENGGTQVMYRVIQVADGQLDGQTEGTSAISGYPAAQSMTQAVIQGAFTSDDAVETEATATETHYTYFPTAAVADSSTSAGAGTTATAVVTTQNSEALLGQPTPTGQFFVMMSPQEVLQGGTQRSIAPRAHPYSPKAEAPRATRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMENTKSGQSKGGILSKACDYIQELRQSNHRLSEELQGLDQLQMDNEVLRQQVEELKSKNLILRAQLRQHGVEIVIKNESH
SIO_010081: USF1
subclass of: SO_0000673
so part of: USF1
location: complement(join(91324..91413,91494..91622,92784..92878,93015..93073,93199..93286,94415..94607,94680..94781,95634..95752,95997..96046,96238..96245))
location: region:91324-96245:-1
so has part: feature:96238-96245:-1:exon
so has part: feature:95997-96046:-1:exon
so has part: feature:95634-95752:-1:exon
so has part: feature:94680-94781:-1:exon
so has part: feature:94415-94607:-1:exon
so has part: feature:93199-93286:-1:exon
so has part: feature:93015-93073:-1:exon
so has part: feature:92784-92878:-1:exon
so has part: feature:91494-91622:-1:exon
so has part: feature:91324-91413:-1:exon

NP_001385070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96238-96245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95997-96046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95634-95752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94680-94781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94415-94607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93199-93286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93015-93073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92784-92878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91494-91622:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91324-91413:-1:exon

LOC101749378
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101749378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99549..111499)
location: region:99549-111499:-1
so has part: feature:99549-111499:-1:exon
subclass of: SO_0000010

101749378
type: Gene
SIO_000068: ncbigene

position:99549:-1
position: 99549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111499:-1
position: 111499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99549-111499:-1:exon

LOC101749378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101749378
product: rho GTPase-activating protein 30-like, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025143619.2
SIO_010081: LOC101749378
subclass of: SO_0000673
so part of: LOC101749378
location: complement(join(99549..101205,101620..101801,101880..102311,103326..103403,103492..103586,104013..104151,104698..104825,104914..105021,105649..105731,107744..107888,109951..110053,111255..111499))
location: region:99549-111499:-1
so has part: feature:111255-111499:-1:exon
so has part: feature:109951-110053:-1:exon
so has part: feature:107744-107888:-1:exon
so has part: feature:105649-105731:-1:exon
so has part: feature:104914-105021:-1:exon
so has part: feature:104698-104825:-1:exon
so has part: feature:104013-104151:-1:exon
so has part: feature:103492-103586:-1:exon
so has part: feature:103326-103403:-1:exon
so has part: feature:101880-102311:-1:exon
so has part: feature:101620-101801:-1:exon
so has part: feature:99549-101205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111255-111499:-1:exon

position:111255:-1
position: 111255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109951-110053:-1:exon

position:109951:-1
position: 109951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110053:-1
position: 110053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107744-107888:-1:exon

position:107744:-1
position: 107744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107888:-1
position: 107888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105649-105731:-1:exon

position:105649:-1
position: 105649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105731:-1
position: 105731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:104914-105021:-1:exon

position:104914:-1
position: 104914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105021:-1
position: 105021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:104698-104825:-1:exon

position:104698:-1
position: 104698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104825:-1
position: 104825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:104013-104151:-1:exon

position:104013:-1
position: 104013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104151:-1
position: 104151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103492-103586:-1:exon

position:103492:-1
position: 103492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103586:-1
position: 103586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:103326-103403:-1:exon

position:103326:-1
position: 103326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103403:-1
position: 103403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:101880-102311:-1:exon

position:101880:-1
position: 101880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102311:-1
position: 102311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:101620-101801:-1:exon

position:101620:-1
position: 101620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101801:-1
position: 101801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:99549-101205:-1:exon

position:101205:-1
position: 101205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101749378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101749378
product: rho GTPase-activating protein 30-like, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025143618.3
SIO_010081: LOC101749378
subclass of: SO_0000673
so part of: LOC101749378
location: complement(join(99549..101205,101620..101801,101880..102314,103326..103403,103492..103586,104013..104151,104698..104825,104914..105021,105649..105731,107744..107888,109951..110053,111255..111499))
location: region:99549-111499:-1
so has part: feature:111255-111499:-1:exon
so has part: feature:109951-110053:-1:exon
so has part: feature:107744-107888:-1:exon
so has part: feature:105649-105731:-1:exon
so has part: feature:104914-105021:-1:exon
so has part: feature:104698-104825:-1:exon
so has part: feature:104013-104151:-1:exon
so has part: feature:103492-103586:-1:exon
so has part: feature:103326-103403:-1:exon
so has part: feature:101880-102314:-1:exon
so has part: feature:101620-101801:-1:exon
so has part: feature:99549-101205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111255-111499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109951-110053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107744-107888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105649-105731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104914-105021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104698-104825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104013-104151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103492-103586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103326-103403:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101880-102314:-1:exon

position:102314:-1
position: 102314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:101620-101801:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:99549-101205:-1:exon

LOC101749378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101749378
product: rho GTPase-activating protein 30-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904070.1
SIO_010081: LOC101749378
subclass of: SO_0000673
so part of: LOC101749378
location: complement(join(99549..101205,101620..101801,101880..102311,103326..103403,103492..103586,104013..104151,104698..104825,104914..105021,105649..106628))
location: region:99549-106628:-1
so has part: feature:105649-106628:-1:exon
so has part: feature:104914-105021:-1:exon
so has part: feature:104698-104825:-1:exon
so has part: feature:104013-104151:-1:exon
so has part: feature:103492-103586:-1:exon
so has part: feature:103326-103403:-1:exon
so has part: feature:101880-102311:-1:exon
so has part: feature:101620-101801:-1:exon
so has part: feature:99549-101205:-1:exon

position:106628:-1
position: 106628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105649-106628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104914-105021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104698-104825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104013-104151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103492-103586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103326-103403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101880-102311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101620-101801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99549-101205:-1:exon

LOC101749378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101749378
product: rho GTPase-activating protein 30-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046904069.1
SIO_010081: LOC101749378
subclass of: SO_0000673
so part of: LOC101749378
location: complement(join(99549..101205,101620..101801,101880..102314,103326..103403,103492..103586,104013..104151,104698..104825,104914..105021,105649..106628))
location: region:99549-106628:-1
so has part: feature:105649-106628:-1:exon
so has part: feature:104914-105021:-1:exon
so has part: feature:104698-104825:-1:exon
so has part: feature:104013-104151:-1:exon
so has part: feature:103492-103586:-1:exon
so has part: feature:103326-103403:-1:exon
so has part: feature:101880-102314:-1:exon
so has part: feature:101620-101801:-1:exon
so has part: feature:99549-101205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105649-106628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104914-105021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104698-104825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104013-104151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103492-103586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103326-103403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101880-102314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101620-101801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99549-101205:-1:exon

LOC101749378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101749378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 30 isoform X4
translation: MSLALKARQKAKRKGGGAKERVFGCDLLEHLQQSGKDVPQVLRSCTEFVEQHGVVDGIYRLSGVSSNIQRLRQEFDGERSPDLQKDVYLQDIHCVSSLCKAYFRELPNPLLTYRLYDRFADAVATQMEEVRLVKIKEVLKELPPPHYRTLEFLMRHLLRMASYSHTTNMHARNLAIVWAPNLLRSRDIEATGFNGTAAFMEVRVQSIVVEFILTHVEQLFGDAPLCGGEAARCSRLFPGDGSGPYNVPAALSQGDGPPPIRPYHTIIELSDHRRKGSLKAKKWKSIFHLGRSDAKRKLGKAEEKEEKCGKLSLRPAKSMDSLSSVPYSSDDDPRLSTMCVLKHPPQRRESFDTCSSLPPTGTFPALEESPEEKLTATEEPRGPESESESSTKSEPTTPRPGRMAVVGARSRAEKCAGVHISGPFSVTVPLHITSNLSRLTRGQQCPALAQHGAIGSPPPTRRPTKEPKPPQTNTEEDARLSLELRDSFAFLDCQDAWLEHGDGDAAARAALGHGGLGDSDGYPAIEEGMESGFMNPGESPVEQPASYLSIEECMDEEMFYMAPSGSDTEEPTGDTDSDDMFLSAHDELSPLAADPETPTASTALGECGAELRDGFPPPEPRPAEEVAPGDGGHLEDPSGDTAEVGGQIAVKEERGGGDREGNDGSSRTELGLEDKDGGTGAMLAPGGKEEKDGAPKQSGEGDPQPLEVPPSPEGPLQEPTEPPLPQESVPTVPPSRVDVPEGPPTPVAVQGAPPTPMVVPEVPPTPMVVQGVLPTPAAVPEVPPTPVVVPEVSPTPLVIQGVLPSPAAVPEVPPTPVAVQGVPPTPVVVPEVSPTPVAVQGVPPTPVVVPEVPPTPAATTEGTDPPPEAVTPPPPRGSP
SIO_010081: LOC101749378
subclass of: SO_0000673
so part of: LOC101749378
location: complement(join(100171..101205,101620..101801,101880..102311,103326..103403,103492..103586,104013..104151,104698..104825,104914..105021,105649..105731,107744..107888,109951..110053,111255..111366))
location: region:100171-111366:-1
so has part: feature:111255-111366:-1:exon
so has part: feature:109951-110053:-1:exon
so has part: feature:107744-107888:-1:exon
so has part: feature:105649-105731:-1:exon
so has part: feature:104914-105021:-1:exon
so has part: feature:104698-104825:-1:exon
so has part: feature:104013-104151:-1:exon
so has part: feature:103492-103586:-1:exon
so has part: feature:103326-103403:-1:exon
so has part: feature:101880-102311:-1:exon
so has part: feature:101620-101801:-1:exon
so has part: feature:100171-101205:-1:exon

XP_024999387.2
type: Protein
SIO_000068: ncbiprotein

position:100171:-1
position: 100171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111366:-1
position: 111366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111255-111366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109951-110053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107744-107888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105649-105731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104914-105021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104698-104825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104013-104151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103492-103586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103326-103403:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101880-102311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:101620-101801:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100171-101205:-1:exon

LOC101749378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101749378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 30 isoform X3
translation: MSLALKARQKAKRKGGGAKERVFGCDLLEHLQQSGKDVPQVLRSCTEFVEQHGVVDGIYRLSGVSSNIQRLRQEFDGERSPDLQKDVYLQDIHCVSSLCKAYFRELPNPLLTYRLYDRFADAVATQMEEVRLVKIKEVLKELPPPHYRTLEFLMRHLLRMASYSHTTNMHARNLAIVWAPNLLRSRDIEATGFNGTAAFMEVRVQSIVVEFILTHVEQLFGDAPLCGGEAARCSRLFPGDGSGPYNVPAALSQGDGPPPIRPYHTIIELSDHRRKGSLKAKKWKSIFHLGRSDAKRKLGKAEEKEEKCGKLSLRPAKSMDSLSSVPYSSDADDPRLSTMCVLKHPPQRRESFDTCSSLPPTGTFPALEESPEEKLTATEEPRGPESESESSTKSEPTTPRPGRMAVVGARSRAEKCAGVHISGPFSVTVPLHITSNLSRLTRGQQCPALAQHGAIGSPPPTRRPTKEPKPPQTNTEEDARLSLELRDSFAFLDCQDAWLEHGDGDAAARAALGHGGLGDSDGYPAIEEGMESGFMNPGESPVEQPASYLSIEECMDEEMFYMAPSGSDTEEPTGDTDSDDMFLSAHDELSPLAADPETPTASTALGECGAELRDGFPPPEPRPAEEVAPGDGGHLEDPSGDTAEVGGQIAVKEERGGGDREGNDGSSRTELGLEDKDGGTGAMLAPGGKEEKDGAPKQSGEGDPQPLEVPPSPEGPLQEPTEPPLPQESVPTVPPSRVDVPEGPPTPVAVQGAPPTPMVVPEVPPTPMVVQGVLPTPAAVPEVPPTPVVVPEVSPTPLVIQGVLPSPAAVPEVPPTPVAVQGVPPTPVVVPEVSPTPVAVQGVPPTPVVVPEVPPTPAATTEGTDPPPEAVTPPPPRGSP
SIO_010081: LOC101749378
subclass of: SO_0000673
so part of: LOC101749378
location: complement(join(100171..101205,101620..101801,101880..102314,103326..103403,103492..103586,104013..104151,104698..104825,104914..105021,105649..105731,107744..107888,109951..110053,111255..111366))
location: region:100171-111366:-1
so has part: feature:111255-111366:-1:exon
so has part: feature:109951-110053:-1:exon
so has part: feature:107744-107888:-1:exon
so has part: feature:105649-105731:-1:exon
so has part: feature:104914-105021:-1:exon
so has part: feature:104698-104825:-1:exon
so has part: feature:104013-104151:-1:exon
so has part: feature:103492-103586:-1:exon
so has part: feature:103326-103403:-1:exon
so has part: feature:101880-102314:-1:exon
so has part: feature:101620-101801:-1:exon
so has part: feature:100171-101205:-1:exon

XP_024999386.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111255-111366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109951-110053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107744-107888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105649-105731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104914-105021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104698-104825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104013-104151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103492-103586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103326-103403:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101880-102314:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:101620-101801:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100171-101205:-1:exon

LOC101749378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101749378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 30 isoform X2
translation: MRGHWGHWGCQVRPREVSPWCQCPRVTPSPCHAVPMSHCPHVTPSPCHAVPMSHRPHVTLSPCHTVPMSHRPHVTPSPCHTIPVSHRPHVTPSPCHTVPVSHCPHVTPSPCQTVPVSHRPHVTRSPCHTIPMSHCPHVTPSPCHTVPVSRRPHVTLSPCHTVPMSRRPHVTPSPCHAVPMSHCPRVTPSPCHTIPVSHRPRVTPSPCHTVPMSHRPRVTPSPCHTIPMSRRPRVTPSPCHAVPMSRRPRVTPSPCHTVPMSHRPPPQDAVATQMEEVRLVKIKEVLKELPPPHYRTLEFLMRHLLRMASYSHTTNMHARNLAIVWAPNLLRSRDIEATGFNGTAAFMEVRVQSIVVEFILTHVEQLFGDAPLCGGEAARCSRLFPGDGSGPYNVPAALSQGDGPPPIRPYHTIIELSDHRRKGSLKAKKWKSIFHLGRSDAKRKLGKAEEKEEKCGKLSLRPAKSMDSLSSVPYSSDDDPRLSTMCVLKHPPQRRESFDTCSSLPPTGTFPALEESPEEKLTATEEPRGPESESESSTKSEPTTPRPGRMAVVGARSRAEKCAGVHISGPFSVTVPLHITSNLSRLTRGQQCPALAQHGAIGSPPPTRRPTKEPKPPQTNTEEDARLSLELRDSFAFLDCQDAWLEHGDGDAAARAALGHGGLGDSDGYPAIEEGMESGFMNPGESPVEQPASYLSIEECMDEEMFYMAPSGSDTEEPTGDTDSDDMFLSAHDELSPLAADPETPTASTALGECGAELRDGFPPPEPRPAEEVAPGDGGHLEDPSGDTAEVGGQIAVKEERGGGDREGNDGSSRTELGLEDKDGGTGAMLAPGGKEEKDGAPKQSGEGDPQPLEVPPSPEGPLQEPTEPPLPQESVPTVPPSRVDVPEGPPTPVAVQGAPPTPMVVPEVPPTPMVVQGVLPTPAAVPEVPPTPVVVPEVSPTPLVIQGVLPSPAAVPEVPPTPVAVQGVPPTPVVVPEVSPTPVAVQGVPPTPVVVPEVPPTPAATTEGTDPPPEAVTPPPPRGSP
SIO_010081: LOC101749378
subclass of: SO_0000673
so part of: LOC101749378
location: complement(join(100171..101205,101620..101801,101880..102311,103326..103403,103492..103586,104013..104151,104698..104825,104914..105021,105649..106532))
location: region:100171-106532:-1
so has part: feature:105649-106532:-1:exon
so has part: feature:104914-105021:-1:exon
so has part: feature:104698-104825:-1:exon
so has part: feature:104013-104151:-1:exon
so has part: feature:103492-103586:-1:exon
so has part: feature:103326-103403:-1:exon
so has part: feature:101880-102311:-1:exon
so has part: feature:101620-101801:-1:exon
so has part: feature:100171-101205:-1:exon

XP_046760026.1
type: Protein
SIO_000068: ncbiprotein

position:106532:-1
position: 106532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105649-106532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104914-105021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104698-104825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104013-104151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103492-103586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103326-103403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101880-102311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101620-101801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100171-101205:-1:exon

LOC101749378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101749378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 30 isoform X1
translation: MRGHWGHWGCQVRPREVSPWCQCPRVTPSPCHAVPMSHCPHVTPSPCHAVPMSHRPHVTLSPCHTVPMSHRPHVTPSPCHTIPVSHRPHVTPSPCHTVPVSHCPHVTPSPCQTVPVSHRPHVTRSPCHTIPMSHCPHVTPSPCHTVPVSRRPHVTLSPCHTVPMSRRPHVTPSPCHAVPMSHCPRVTPSPCHTIPVSHRPRVTPSPCHTVPMSHRPRVTPSPCHTIPMSRRPRVTPSPCHAVPMSRRPRVTPSPCHTVPMSHRPPPQDAVATQMEEVRLVKIKEVLKELPPPHYRTLEFLMRHLLRMASYSHTTNMHARNLAIVWAPNLLRSRDIEATGFNGTAAFMEVRVQSIVVEFILTHVEQLFGDAPLCGGEAARCSRLFPGDGSGPYNVPAALSQGDGPPPIRPYHTIIELSDHRRKGSLKAKKWKSIFHLGRSDAKRKLGKAEEKEEKCGKLSLRPAKSMDSLSSVPYSSDADDPRLSTMCVLKHPPQRRESFDTCSSLPPTGTFPALEESPEEKLTATEEPRGPESESESSTKSEPTTPRPGRMAVVGARSRAEKCAGVHISGPFSVTVPLHITSNLSRLTRGQQCPALAQHGAIGSPPPTRRPTKEPKPPQTNTEEDARLSLELRDSFAFLDCQDAWLEHGDGDAAARAALGHGGLGDSDGYPAIEEGMESGFMNPGESPVEQPASYLSIEECMDEEMFYMAPSGSDTEEPTGDTDSDDMFLSAHDELSPLAADPETPTASTALGECGAELRDGFPPPEPRPAEEVAPGDGGHLEDPSGDTAEVGGQIAVKEERGGGDREGNDGSSRTELGLEDKDGGTGAMLAPGGKEEKDGAPKQSGEGDPQPLEVPPSPEGPLQEPTEPPLPQESVPTVPPSRVDVPEGPPTPVAVQGAPPTPMVVPEVPPTPMVVQGVLPTPAAVPEVPPTPVVVPEVSPTPLVIQGVLPSPAAVPEVPPTPVAVQGVPPTPVVVPEVSPTPVAVQGVPPTPVVVPEVPPTPAATTEGTDPPPEAVTPPPPRGSP
SIO_010081: LOC101749378
subclass of: SO_0000673
so part of: LOC101749378
location: complement(join(100171..101205,101620..101801,101880..102314,103326..103403,103492..103586,104013..104151,104698..104825,104914..105021,105649..106532))
location: region:100171-106532:-1
so has part: feature:105649-106532:-1:exon
so has part: feature:104914-105021:-1:exon
so has part: feature:104698-104825:-1:exon
so has part: feature:104013-104151:-1:exon
so has part: feature:103492-103586:-1:exon
so has part: feature:103326-103403:-1:exon
so has part: feature:101880-102314:-1:exon
so has part: feature:101620-101801:-1:exon
so has part: feature:100171-101205:-1:exon

XP_046760025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105649-106532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104914-105021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104698-104825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104013-104151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103492-103586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103326-103403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101880-102314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101620-101801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100171-101205:-1:exon

LOC101750739
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: nectin-4
gene: LOC101750739
gene synonym: nectin-4
note: poliovirus receptor-related protein 4-like; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(113719..138017)
location: region:113719-138017:-1
so has part: feature:113719-138017:-1:exon
subclass of: SO_0000010

101750739
type: Gene
SIO_000068: ncbigene

position:113719:-1
position: 113719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138017:-1
position: 138017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113719-138017:-1:exon

LOC101750739
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: nectin-4
gene: LOC101750739
gene synonym: nectin-4
product: poliovirus receptor-related protein 4-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903867.1
SIO_010081: LOC101750739
subclass of: SO_0000673
so part of: LOC101750739
location: complement(join(113719..115392,116026..116160,117135..117213,118391..118538,119589..119752,120315..120429,121532..121822,123445..123798,129952..130160))
location: region:113719-130160:-1
so has part: feature:129952-130160:-1:exon
so has part: feature:123445-123798:-1:exon
so has part: feature:121532-121822:-1:exon
so has part: feature:120315-120429:-1:exon
so has part: feature:119589-119752:-1:exon
so has part: feature:118391-118538:-1:exon
so has part: feature:117135-117213:-1:exon
so has part: feature:116026-116160:-1:exon
so has part: feature:113719-115392:-1:exon

position:130160:-1
position: 130160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129952-130160:-1:exon

position:129952:-1
position: 129952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123445-123798:-1:exon

position:123445:-1
position: 123445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123798:-1
position: 123798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121532-121822:-1:exon

position:121532:-1
position: 121532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121822:-1
position: 121822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:120315-120429:-1:exon

position:120315:-1
position: 120315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120429:-1
position: 120429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119589-119752:-1:exon

position:119589:-1
position: 119589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119752:-1
position: 119752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:118391-118538:-1:exon

position:118391:-1
position: 118391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118538:-1
position: 118538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:117135-117213:-1:exon

position:117135:-1
position: 117135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117213:-1
position: 117213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:116026-116160:-1:exon

position:116026:-1
position: 116026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116160:-1
position: 116160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:113719-115392:-1:exon

position:115392:-1
position: 115392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101750739
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: nectin-4
gene: LOC101750739
gene synonym: nectin-4
product: poliovirus receptor-related protein 4-like
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001397241.2
SIO_010081: LOC101750739
subclass of: SO_0000673
so part of: LOC101750739
location: complement(join(113955..115392,116026..116160,117135..117213,118391..118538,119589..119752,120315..120429,121532..121822,123445..123798,137938..138017))
location: region:113955-138017:-1
so has part: feature:137938-138017:-1:exon
so has part: feature:123445-123798:-1:exon
so has part: feature:121532-121822:-1:exon
so has part: feature:120315-120429:-1:exon
so has part: feature:119589-119752:-1:exon
so has part: feature:118391-118538:-1:exon
so has part: feature:117135-117213:-1:exon
so has part: feature:116026-116160:-1:exon
so has part: feature:113955-115392:-1:exon

position:113955:-1
position: 113955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137938-138017:-1:exon

position:137938:-1
position: 137938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123445-123798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121532-121822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120315-120429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119589-119752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118391-118538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117135-117213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116026-116160:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113955-115392:-1:exon

LOC101750739
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: nectin-4
gene: LOC101750739
gene synonym: nectin-4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: nectin-4 precursor
translation: MWALLLLPLGLSLTPQPPGCDGGVVEVQRSVTAVLGQDAVLPCRYRAQEGEQVVQVTWLKRSASGRSTEVAVLDLRHGEHVQDAYVGRVRRRGDGALEDGGIVLRNAVQGDEGDYECHLITFPLGSFEGRVALRVLVPPLPILNPGPPLEEGQGRTLAASCTAEGNPVPTVRWETEVRGANATRQSQHDHSASVTSEFFVVPGRSMNGKSLTCVVAHPGLVQEKRIIHQLSVAYLSDASVLGHTEEWAEGMEGAALTCLGDGNPPPTYNWTRLDAPLPAGVRVKGDTLLFQRPLAAADAGDYVCRVANRVAAKEARANVSIKSRAAEDEVRRVDLVSASVVVVGVIAAVLLCVLVVVVVVMTLYHKRKTKRISEKYEEELTLTRENSIRRLHSSHSTDTRTQMEETLQLRTESRQGSLRGDSLRGDSLRGDSLRGDSLRGTSICSAMSEEAEGRSYSTLSTVREIETQTEVPVSPLLSPSLEGKEVKEEEEDGGDNPIKQAMTHFVQENGMLQARPSTNGIYINGRGHLV
SIO_010081: LOC101750739
subclass of: SO_0000673
so part of: LOC101750739
location: complement(join(115141..115392,116026..116160,117135..117213,118391..118538,119589..119752,120315..120429,121532..121822,123445..123798,137938..137992))
location: region:115141-137992:-1
so has part: feature:137938-137992:-1:exon
so has part: feature:123445-123798:-1:exon
so has part: feature:121532-121822:-1:exon
so has part: feature:120315-120429:-1:exon
so has part: feature:119589-119752:-1:exon
so has part: feature:118391-118538:-1:exon
so has part: feature:117135-117213:-1:exon
so has part: feature:116026-116160:-1:exon
so has part: feature:115141-115392:-1:exon

NP_001384170.2
type: Protein
SIO_000068: ncbiprotein

position:115141:-1
position: 115141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137992:-1
position: 137992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137938-137992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123445-123798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121532-121822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120315-120429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119589-119752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118391-118538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117135-117213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116026-116160:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115141-115392:-1:exon

LOC101750739
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9031
alternative label: nectin-4
gene: LOC101750739
gene synonym: nectin-4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: LOC101750739
subclass of: SO_0000673
so part of: LOC101750739
location: complement(join(123788..123798,137938..137992))
location: region:123788-137992:-1
so has part: feature:137938-137992:-1:exon
so has part: feature:123788-123798:-1:exon

position:123788:-1
position: 123788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137938-137992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123788-123798:-1:exon

LOC101750739
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: nectin-4
gene: LOC101750739
gene synonym: nectin-4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nectin-4 isoform X1
translation: MAPRGTRPGAAAFSLLLLLLLTGCDGGVVEVQRSVTAVLGQDAVLPCRYRAQEGEQVVQVTWLKRSASGRSTEVAVLDLRHGEHVQDAYVGRVRRRGDGALEDGGIVLRNAVQGDEGDYECHLITFPLGSFEGRVALRVLVPPLPILNPGPPLEEGQGRTLAASCTAEGNPVPTVRWETEVRGANATRQSQHDHSASVTSEFFVVPGRSMNGKSLTCVVAHPGLVQEKRIIHQLSVAYLSDASVLGHTEEWAEGMEGAALTCLGDGNPPPTYNWTRLDAPLPAGVRVKGDTLLFQRPLAAADAGDYVCRVANRVAAKEARANVSIKSRAAEDEVRRVDLVSASVVVVGVIAAVLLCVLVVVVVVMTLYHKRKTKRISEKYEEELTLTRENSIRRLHSSHSTDTRTQMEETLQLRTESRQGSLRGDSLRGDSLRGDSLRGDSLRGTSICSAMSEEAEGRSYSTLSTVREIETQTEVPVSPLLSPSLEGKEVKEEEEDGGDNPIKQAMTHFVQENGMLQARPSTNGIYINGRGHLV
SIO_010081: LOC101750739
subclass of: SO_0000673
so part of: LOC101750739
location: complement(join(115141..115392,116026..116160,117135..117213,118391..118538,119589..119752,120315..120429,121532..121822,123445..123798,129952..130018))
location: region:115141-130018:-1
so has part: feature:129952-130018:-1:exon
so has part: feature:123445-123798:-1:exon
so has part: feature:121532-121822:-1:exon
so has part: feature:120315-120429:-1:exon
so has part: feature:119589-119752:-1:exon
so has part: feature:118391-118538:-1:exon
so has part: feature:117135-117213:-1:exon
so has part: feature:116026-116160:-1:exon
so has part: feature:115141-115392:-1:exon

XP_046759823.1
type: Protein
SIO_000068: ncbiprotein

position:130018:-1
position: 130018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129952-130018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123445-123798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121532-121822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120315-120429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119589-119752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118391-118538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117135-117213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116026-116160:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115141-115392:-1:exon

LIM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(130588..138536)
location: region:130588-138536:-1
so has part: feature:130588-138536:-1:exon
subclass of: SO_0000010

101749931
type: Gene
SIO_000068: ncbigene

position:130588:-1
position: 130588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138536:-1
position: 138536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130588-138536:-1:exon

LIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIM2
product: lens intrinsic membrane protein 2, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025143635.3
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130588..130915,131350..131466,132113..132253,135184..135834,137026..137379,138499..138536))
location: region:130588-138536:-1
so has part: feature:138499-138536:-1:exon
so has part: feature:137026-137379:-1:exon
so has part: feature:135184-135834:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:131350-131466:-1:exon
so has part: feature:130588-130915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138499-138536:-1:exon

position:138499:-1
position: 138499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137026-137379:-1:exon

position:137026:-1
position: 137026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137379:-1
position: 137379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135184-135834:-1:exon

position:135184:-1
position: 135184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135834:-1
position: 135834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:132113-132253:-1:exon

position:132113:-1
position: 132113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132253:-1
position: 132253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131350-131466:-1:exon

position:131350:-1
position: 131350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131466:-1
position: 131466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:130588-130915:-1:exon

position:130915:-1
position: 130915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIM2
product: lens intrinsic membrane protein 2, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040652461.2
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130588..130915,131350..131466,132113..132253,135184..135834,137026..137379,137938..138017))
location: region:130588-138017:-1
so has part: feature:137938-138017:-1:exon
so has part: feature:137026-137379:-1:exon
so has part: feature:135184-135834:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:131350-131466:-1:exon
so has part: feature:130588-130915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137938-138017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137026-137379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135184-135834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131350-131466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:130588-130915:-1:exon

LIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIM2
product: lens intrinsic membrane protein 2, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040652463.2
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130592..130915,131350..131466,132113..132253,134306..134474,135184..135834,137026..137379,137938..138017))
location: region:130592-138017:-1
so has part: feature:137938-138017:-1:exon
so has part: feature:137026-137379:-1:exon
so has part: feature:135184-135834:-1:exon
so has part: feature:134306-134474:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:131350-131466:-1:exon
so has part: feature:130592-130915:-1:exon

position:130592:-1
position: 130592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137938-138017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137026-137379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135184-135834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134306-134474:-1:exon

position:134306:-1
position: 134306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134474:-1
position: 134474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131350-131466:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130592-130915:-1:exon

LIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIM2
product: lens intrinsic membrane protein 2, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_046903961.1
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130594..130915,132113..132253,135184..135834,137026..137379,137938..138017))
location: region:130594-138017:-1
so has part: feature:137938-138017:-1:exon
so has part: feature:137026-137379:-1:exon
so has part: feature:135184-135834:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:130594-130915:-1:exon

position:130594:-1
position: 130594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137938-138017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137026-137379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135184-135834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130594-130915:-1:exon

LIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LIM2
product: lens intrinsic membrane protein 2, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_046903962.1
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130595..130915,132113..132253,134306..134474,135184..135834,137026..137379,137938..138017))
location: region:130595-138017:-1
so has part: feature:137938-138017:-1:exon
so has part: feature:137026-137379:-1:exon
so has part: feature:135184-135834:-1:exon
so has part: feature:134306-134474:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:130595-130915:-1:exon

position:130595:-1
position: 130595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137938-138017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137026-137379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135184-135834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134306-134474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:130595-130915:-1:exon

LIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber membrane intrinsic protein isoform X4
translation: MSPPTRPRAPTCATPPPPWQRCPRVVEGAPQCHPLLSAPTVPIVPIVPIVPIVPTVPIVPSVGGGFWRCQRPDPSRLCAPHNGSATCADPMSPPRHPAGRTDGQRDAVPAGAEAIWDATRALMLLAVLAAAVGFAVGLSAAGGAAWRARARVAGMAMLLAGLFHLCAAAKDLSPESSETGGG
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130848..130915,132113..132253,135184..135523))
location: region:130848-135523:-1
so has part: feature:135184-135523:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:130848-130915:-1:exon

XP_046759917.1
type: Protein
SIO_000068: ncbiprotein

position:130848:-1
position: 130848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135523:-1
position: 135523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135184-135523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130848-130915:-1:exon

LIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber membrane intrinsic protein isoform X3
translation: MSPPTRPRAPTCATPPPPWQRCPRVVEGAPQCHPLLSAPTVPIVPIVPIVPIVPTVPIVPSVGGGFWRCQRPDPSRLCAPHNGSATCADPMSPPRHPAGRTDGQRDAVPAGAEAIWDATRALMLLAVLAAAVGFAVGLSAAGGAAWRARARVAGMAMLLAGALALLGLAVCTAGARGTAWHFSWSYILGWVGVVLIGSAGLFHLCAAAKDLSPESSETGGG
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130848..130915,131350..131466,132113..132253,135184..135523))
location: region:130848-135523:-1
so has part: feature:135184-135523:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:131350-131466:-1:exon
so has part: feature:130848-130915:-1:exon

XP_040508395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135184-135523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131350-131466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130848-130915:-1:exon

LIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber membrane intrinsic protein isoform X3
translation: MSPPTRPRAPTCATPPPPWQRCPRVVEGAPQCHPLLSAPTVPIVPIVPIVPIVPTVPIVPSVGGGFWRCQRPDPSRLCAPHNGSATCADPMSPPRHPAGRTDGQRDAVPAGAEAIWDATRALMLLAVLAAAVGFAVGLSAAGGAAWRARARVAGMAMLLAGALALLGLAVCTAGARGTAWHFSWSYILGWVGVVLIGSAGLFHLCAAAKDLSPESSETGGG
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130848..130915,131350..131466,132113..132253,135184..135523))
location: region:130848-135523:-1
so has part: feature:135184-135523:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:131350-131466:-1:exon
so has part: feature:130848-130915:-1:exon

XP_024999403.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135184-135523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131350-131466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130848-130915:-1:exon

LIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber membrane intrinsic protein isoform X2
translation: MAAPRAPTRCPLRVTRRDGQTDRGTLCRRGLKGRMAAGGLLCAASGLCALLGATATDFWLSPRGRGDAVGLWRFCTAGGHCRTPPGQPAIWDATRALMLLAVLAAAVGFAVGLSAAGGAAWRARARVAGMAMLLAGLFHLCAAAKDLSPESSETGGG
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130848..130915,132113..132253,134306..134474,135184..135279))
location: region:130848-135279:-1
so has part: feature:135184-135279:-1:exon
so has part: feature:134306-134474:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:130848-130915:-1:exon

XP_046759918.1
type: Protein
SIO_000068: ncbiprotein

position:135279:-1
position: 135279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135184-135279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134306-134474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130848-130915:-1:exon

LIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber membrane intrinsic protein isoform X1
translation: MAAPRAPTRCPLRVTRRDGQTDRGTLCRRGLKGRMAAGGLLCAASGLCALLGATATDFWLSPRGRGDAVGLWRFCTAGGHCRTPPGQPAIWDATRALMLLAVLAAAVGFAVGLSAAGGAAWRARARVAGMAMLLAGALALLGLAVCTAGARGTAWHFSWSYILGWVGVVLIGSAGLFHLCAAAKDLSPESSETGGG
SIO_010081: LIM2
subclass of: SO_0000673
so part of: LIM2
location: complement(join(130848..130915,131350..131466,132113..132253,134306..134474,135184..135279))
location: region:130848-135279:-1
so has part: feature:135184-135279:-1:exon
so has part: feature:134306-134474:-1:exon
so has part: feature:132113-132253:-1:exon
so has part: feature:131350-131466:-1:exon
so has part: feature:130848-130915:-1:exon

XP_040508397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135184-135279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134306-134474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132113-132253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131350-131466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130848-130915:-1:exon

LOC112530311
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC112530311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 138649..148768
location: region:138649-148768:1
so has part: feature:138649-148768:1:exon
subclass of: SO_0000011

112530311
type: Gene
SIO_000068: ncbigene

position:138649:1
position: 138649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148768:1
position: 148768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138649-148768:1:exon

LOC112530311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC112530311
product: uncharacterized LOC112530311, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_006932117.1
SIO_010081: LOC112530311
subclass of: SO_0000673
so part of: LOC112530311
location: join(138649..138723,140728..141448,142993..148768)
location: region:138649-148768:1
so has part: feature:138649-138723:1:exon
so has part: feature:140728-141448:1:exon
so has part: feature:142993-148768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138649-138723:1:exon

position:138723:1
position: 138723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140728-141448:1:exon

position:140728:1
position: 140728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141448:1
position: 141448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142993-148768:1:exon

position:142993:1
position: 142993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112530311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC112530311
product: uncharacterized LOC112530311, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_006932118.1
SIO_010081: LOC112530311
subclass of: SO_0000673
so part of: LOC112530311
location: join(138649..138681,140728..141448,142993..148768)
location: region:138649-148768:1
so has part: feature:138649-138681:1:exon
so has part: feature:140728-141448:1:exon
so has part: feature:142993-148768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138649-138681:1:exon

position:138681:1
position: 138681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140728-141448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142993-148768:1:exon

LOC112530311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC112530311
product: uncharacterized LOC112530311, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005841803.2
SIO_010081: LOC112530311
subclass of: SO_0000673
so part of: LOC112530311
location: join(141137..141448,142993..143884,144175..148768)
location: region:141137-148768:1
so has part: feature:141137-141448:1:exon
so has part: feature:142993-143884:1:exon
so has part: feature:144175-148768:1:exon

position:141137:1
position: 141137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141137-141448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142993-143884:1:exon

position:143884:1
position: 143884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144175-148768:1:exon

position:144175:1
position: 144175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107055082
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107055082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(152548..154094)
location: region:152548-154094:-1
so has part: feature:152548-154094:-1:exon
subclass of: SO_0000010

107055082
type: Gene
SIO_000068: ncbigene

position:152548:-1
position: 152548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154094:-1
position: 154094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152548-154094:-1:exon

LOC107055082
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107055082
product: cytochrome b5 domain-containing protein 1-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298329.4
SIO_010081: LOC107055082
subclass of: SO_0000673
so part of: LOC107055082
location: complement(join(152548..152662,152908..153142,153282..153500,153799..153875,153943..154094))
location: region:152548-154094:-1
so has part: feature:153943-154094:-1:exon
so has part: feature:153799-153875:-1:exon
so has part: feature:153282-153500:-1:exon
so has part: feature:152908-153142:-1:exon
so has part: feature:152548-152662:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153943-154094:-1:exon

position:153943:-1
position: 153943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153799-153875:-1:exon

position:153799:-1
position: 153799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153875:-1
position: 153875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153282-153500:-1:exon

position:153282:-1
position: 153282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153500:-1
position: 153500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152908-153142:-1:exon

position:152908:-1
position: 152908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153142:-1
position: 153142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152548-152662:-1:exon

position:152662:-1
position: 152662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107055082
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107055082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5 domain-containing protein 1 isoform X1
translation: MAAGGAERRPRYFMAREVAEAGRFRLSALGRVYDLGPLLRERRGDVTLAPLLGAVGTDVSHCFDPESGDPLPRVEPRTGQTGSRYPLGTPGSSQSLTPRSDGAPPLDAAWWRDPRLQVGRLTAAPRLLRLCNTLTGQNCVVEVCGEEPVGEALWRAKAWKEQLERYTACYGGVPLRLHLSLEQNGIPDSTSELRSLRLDPKDFIPTVLLYFNDDAGNATEAPTVTSSPP
SIO_010081: LOC107055082
subclass of: SO_0000673
so part of: LOC107055082
location: complement(join(152634..152662,152908..153142,153282..153500,153799..153875,153943..154072))
location: region:152634-154072:-1
so has part: feature:153943-154072:-1:exon
so has part: feature:153799-153875:-1:exon
so has part: feature:153282-153500:-1:exon
so has part: feature:152908-153142:-1:exon
so has part: feature:152634-152662:-1:exon

XP_015153815.2
type: Protein
SIO_000068: ncbiprotein

position:152634:-1
position: 152634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154072:-1
position: 154072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153943-154072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153799-153875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153282-153500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152908-153142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152634-152662:-1:exon

LOC107055083
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107055083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 153863..160531
location: region:153863-160531:1
so has part: feature:153863-160531:1:exon
subclass of: SO_0000011

107055083
type: Gene
SIO_000068: ncbigene

position:153863:1
position: 153863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160531:1
position: 160531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153863-160531:1:exon

LOC107055083
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC107055083
product: uncharacterized LOC107055083
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_001470075.4
SIO_010081: LOC107055083
subclass of: SO_0000673
so part of: LOC107055083
location: join(153863..154944,156962..159250,159766..160531)
location: region:153863-160531:1
so has part: feature:153863-154944:1:exon
so has part: feature:156962-159250:1:exon
so has part: feature:159766-160531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153863-154944:1:exon

position:154944:1
position: 154944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156962-159250:1:exon

position:156962:1
position: 156962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159250:1
position: 159250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:159766-160531:1:exon

position:159766:1
position: 159766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121107550
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121107550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(156992..163830)
location: region:156992-163830:-1
so has part: feature:156992-163830:-1:exon
subclass of: SO_0000011

121107550
type: Gene
SIO_000068: ncbigene

position:156992:-1
position: 156992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163830:-1
position: 163830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156992-163830:-1:exon

LOC121107550
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121107550
product: uncharacterized LOC121107550
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005841804.2
SIO_010081: LOC121107550
subclass of: SO_0000673
so part of: LOC121107550
location: complement(join(156992..157183,163513..163830))
location: region:156992-163830:-1
so has part: feature:163513-163830:-1:exon
so has part: feature:156992-157183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163513-163830:-1:exon

position:163513:-1
position: 163513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156992-157183:-1:exon

position:157183:-1
position: 157183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS45
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: VPS45A
gene: VPS45
gene synonym: VPS45A
note: vacuolar protein sorting 45 homolog; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 164020..191147
location: region:164020-191147:1
so has part: feature:164020-191147:1:exon
subclass of: SO_0000010

430741
type: Gene
SIO_000068: ncbigene

position:164020:1
position: 164020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191147:1
position: 191147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164020-191147:1:exon

VPS45
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
alternative label: VPS45A
gene: VPS45
gene synonym: VPS45A
product: vacuolar protein sorting 45 homolog, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005841796.2
SIO_010081: VPS45
so part of: VPS45
location: join(164020..164181,164270..164404,164482..164542,167315..167394,167845..167913,168214..168351,168741..168851,170122..170256,170524..170637,171303..171470,174963..175121,175868..175975,176785..176906,183259..183390,184420..184525,190572..191147)
location: region:164020-191147:1
so has part: feature:164020-164181:1:exon
so has part: feature:164270-164404:1:exon
so has part: feature:164482-164542:1:exon
so has part: feature:167315-167394:1:exon
so has part: feature:167845-167913:1:exon
so has part: feature:168214-168351:1:exon
so has part: feature:168741-168851:1:exon
so has part: feature:170122-170256:1:exon
so has part: feature:170524-170637:1:exon
so has part: feature:171303-171470:1:exon
so has part: feature:174963-175121:1:exon
so has part: feature:175868-175975:1:exon
so has part: feature:176785-176906:1:exon
so has part: feature:183259-183390:1:exon
so has part: feature:184420-184525:1:exon
so has part: feature:190572-191147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164020-164181:1:exon

position:164181:1
position: 164181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164270-164404:1:exon

position:164270:1
position: 164270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164404:1
position: 164404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164482-164542:1:exon

position:164482:1
position: 164482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164542:1
position: 164542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167315-167394:1:exon

position:167315:1
position: 167315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167394:1
position: 167394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167845-167913:1:exon

position:167845:1
position: 167845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167913:1
position: 167913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168214-168351:1:exon

position:168214:1
position: 168214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168351:1
position: 168351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:168741-168851:1:exon

position:168741:1
position: 168741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168851:1
position: 168851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:170122-170256:1:exon

position:170122:1
position: 170122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170256:1
position: 170256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:170524-170637:1:exon

position:170524:1
position: 170524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170637:1
position: 170637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:171303-171470:1:exon

position:171303:1
position: 171303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171470:1
position: 171470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:174963-175121:1:exon

position:174963:1
position: 174963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175121:1
position: 175121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:175868-175975:1:exon

position:175868:1
position: 175868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175975:1
position: 175975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:176785-176906:1:exon

position:176785:1
position: 176785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176906:1
position: 176906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:183259-183390:1:exon

position:183259:1
position: 183259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183390:1
position: 183390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:184420-184525:1:exon

position:184420:1
position: 184420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184525:1
position: 184525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:190572-191147:1:exon

position:190572:1
position: 190572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: VPS45A
gene: VPS45
gene synonym: VPS45A
product: vacuolar protein sorting 45 homolog, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652368.2
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: join(164020..164181,164270..164404,164482..164542,167315..167394,167845..167913,168214..168351,168741..168851,170122..170256,170524..170637,171303..171470,174963..175121,175868..175975,176785..176906,183259..183390,190572..191147)
location: region:164020-191147:1
so has part: feature:164020-164181:1:exon
so has part: feature:164270-164404:1:exon
so has part: feature:164482-164542:1:exon
so has part: feature:167315-167394:1:exon
so has part: feature:167845-167913:1:exon
so has part: feature:168214-168351:1:exon
so has part: feature:168741-168851:1:exon
so has part: feature:170122-170256:1:exon
so has part: feature:170524-170637:1:exon
so has part: feature:171303-171470:1:exon
so has part: feature:174963-175121:1:exon
so has part: feature:175868-175975:1:exon
so has part: feature:176785-176906:1:exon
so has part: feature:183259-183390:1:exon
so has part: feature:190572-191147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164020-164181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164270-164404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164482-164542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167315-167394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167845-167913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168214-168351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168741-168851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170122-170256:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170524-170637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171303-171470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174963-175121:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:175868-175975:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:176785-176906:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:183259-183390:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190572-191147:1:exon

VPS45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: VPS45A
gene: VPS45
gene synonym: VPS45A
product: vacuolar protein sorting 45 homolog, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652369.2
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: join(164020..164181,164270..164404,164482..164542,167315..167394,167845..167913,168214..168351,168741..168851,170122..170256,170524..170637,171303..171470,174963..175121,175868..175975,176785..176906,176984..179219)
location: region:164020-179219:1
so has part: feature:164020-164181:1:exon
so has part: feature:164270-164404:1:exon
so has part: feature:164482-164542:1:exon
so has part: feature:167315-167394:1:exon
so has part: feature:167845-167913:1:exon
so has part: feature:168214-168351:1:exon
so has part: feature:168741-168851:1:exon
so has part: feature:170122-170256:1:exon
so has part: feature:170524-170637:1:exon
so has part: feature:171303-171470:1:exon
so has part: feature:174963-175121:1:exon
so has part: feature:175868-175975:1:exon
so has part: feature:176785-176906:1:exon
so has part: feature:176984-179219:1:exon

position:179219:1
position: 179219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164020-164181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164270-164404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164482-164542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167315-167394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167845-167913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168214-168351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168741-168851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170122-170256:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170524-170637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171303-171470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174963-175121:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:175868-175975:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:176785-176906:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:176984-179219:1:exon

position:176984:1
position: 176984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: VPS45A
gene: VPS45
gene synonym: VPS45A
product: vacuolar protein sorting 45 homolog
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001031593.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001031593.1
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: join(164044..164181,164270..164404,164482..164542,167082..167149,167315..167394,167845..167913,168214..168351,168741..168851,170122..170256,170524..170637,171303..171470,174963..175121,175868..175975,176785..176906,183259..183390,184420..186033)
location: region:164044-186033:1
so has part: feature:164044-164181:1:exon
so has part: feature:164270-164404:1:exon
so has part: feature:164482-164542:1:exon
so has part: feature:167082-167149:1:exon
so has part: feature:167315-167394:1:exon
so has part: feature:167845-167913:1:exon
so has part: feature:168214-168351:1:exon
so has part: feature:168741-168851:1:exon
so has part: feature:170122-170256:1:exon
so has part: feature:170524-170637:1:exon
so has part: feature:171303-171470:1:exon
so has part: feature:174963-175121:1:exon
so has part: feature:175868-175975:1:exon
so has part: feature:176785-176906:1:exon
so has part: feature:183259-183390:1:exon
so has part: feature:184420-186033:1:exon

position:164044:1
position: 164044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186033:1
position: 186033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164044-164181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164270-164404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164482-164542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167082-167149:1:exon

position:167082:1
position: 167082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167149:1
position: 167149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167315-167394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167845-167913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168214-168351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:168741-168851:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170122-170256:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:170524-170637:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:171303-171470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:174963-175121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:175868-175975:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:176785-176906:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183259-183390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:184420-186033:1:exon

VPS45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: VPS45A
gene: VPS45
gene synonym: VPS45A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 45 isoform X1
translation: MNAVLAVKQYVSKMIEDSGPGMKVLLMDRETPGAVSMVYTQSEILQKEVYLFERIDSPGREPMKHLKAVCFLRPTKENVDYLIQELRRPKYSIYYIYFSNVISKSDIKALAEADEQEVVAEIQEFYGDYIAVNPHVFSLNLLGCCQGRSWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELLGINNNRVDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVGERNLLEVSEVEQELACHNDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLMADLKNRGVSERYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKGKLKDSQYPYLGPNTLRDRPQDIIVFIIGGATYEEALTVYNLNRTNPGVRVVLGGTTIHNTRSFLEEVTASGFRGRSTESSHAAPRPSSRR
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: join(164089..164181,164270..164404,164482..164542,167315..167394,167845..167913,168214..168351,168741..168851,170122..170256,170524..170637,171303..171470,174963..175121,175868..175975,176785..176906,183259..183390,190572..190659)
location: region:164089-190659:1
so has part: feature:164089-164181:1:exon
so has part: feature:164270-164404:1:exon
so has part: feature:164482-164542:1:exon
so has part: feature:167315-167394:1:exon
so has part: feature:167845-167913:1:exon
so has part: feature:168214-168351:1:exon
so has part: feature:168741-168851:1:exon
so has part: feature:170122-170256:1:exon
so has part: feature:170524-170637:1:exon
so has part: feature:171303-171470:1:exon
so has part: feature:174963-175121:1:exon
so has part: feature:175868-175975:1:exon
so has part: feature:176785-176906:1:exon
so has part: feature:183259-183390:1:exon
so has part: feature:190572-190659:1:exon

XP_040508302.1
type: Protein
SIO_000068: ncbiprotein

position:164089:1
position: 164089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190659:1
position: 190659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164089-164181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164270-164404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164482-164542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167315-167394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167845-167913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168214-168351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168741-168851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170122-170256:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170524-170637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171303-171470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174963-175121:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:175868-175975:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:176785-176906:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:183259-183390:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190572-190659:1:exon

VPS45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: VPS45A
gene: VPS45
gene synonym: VPS45A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 45 isoform X2
translation: MNAVLAVKQYVSKMIEDSGPGMKVLLMDRETPGAVSMVYTQSEILQKEVYLFERIDSPGREPMKHLKAVCFLRPTKENVDYLIQELRRPKYSIYYIYFSNVISKSDIKALAEADEQEVVAEIQEFYGDYIAVNPHVFSLNLLGCCQGRSWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELLGINNNRVDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVGERNLLEVSEVEQELACHNDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLMADLKNRGVSERYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKGKLKDSQYPYLGPNTLRDR
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: join(164089..164181,164270..164404,164482..164542,167315..167394,167845..167913,168214..168351,168741..168851,170122..170256,170524..170637,171303..171470,174963..175121,175868..175975,176785..176906,176984..176987)
location: region:164089-176987:1
so has part: feature:164089-164181:1:exon
so has part: feature:164270-164404:1:exon
so has part: feature:164482-164542:1:exon
so has part: feature:167315-167394:1:exon
so has part: feature:167845-167913:1:exon
so has part: feature:168214-168351:1:exon
so has part: feature:168741-168851:1:exon
so has part: feature:170122-170256:1:exon
so has part: feature:170524-170637:1:exon
so has part: feature:171303-171470:1:exon
so has part: feature:174963-175121:1:exon
so has part: feature:175868-175975:1:exon
so has part: feature:176785-176906:1:exon
so has part: feature:176984-176987:1:exon

XP_040508303.1
type: Protein
SIO_000068: ncbiprotein

position:176987:1
position: 176987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164089-164181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164270-164404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164482-164542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167315-167394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167845-167913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168214-168351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168741-168851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170122-170256:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170524-170637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171303-171470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174963-175121:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:175868-175975:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:176785-176906:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:176984-176987:1:exon

VPS45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: VPS45A
gene: VPS45
gene synonym: VPS45A
inference: similar to AA sequence (same species):RefSeq:NP_001026764.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: vacuolar protein sorting-associated protein 45
translation: MIQYQLSSEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELLGINNNRVDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVGERNLLEVSEVEQELACHNDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLMADLKNRGVSERYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKGKLKDSQYPYLGPNTLRDRPQDIIVFIIGGATYEEALTVYNLNRTNPGVRVVLGGTTIHNTRRKQSCAVSV
SIO_010081: VPS45
subclass of: SO_0000673
so part of: VPS45
location: join(168295..168351,168741..168851,170122..170256,170524..170637,171303..171470,174963..175121,175868..175975,176785..176906,183259..183390,184420..184447)
location: region:168295-184447:1
so has part: feature:168295-168351:1:exon
so has part: feature:168741-168851:1:exon
so has part: feature:170122-170256:1:exon
so has part: feature:170524-170637:1:exon
so has part: feature:171303-171470:1:exon
so has part: feature:174963-175121:1:exon
so has part: feature:175868-175975:1:exon
so has part: feature:176785-176906:1:exon
so has part: feature:183259-183390:1:exon
so has part: feature:184420-184447:1:exon

NP_001026764.1
type: Protein
SIO_000068: ncbiprotein

position:168295:1
position: 168295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184447:1
position: 184447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168295-168351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168741-168851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170122-170256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170524-170637:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171303-171470:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174963-175121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175868-175975:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176785-176906:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183259-183390:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184420-184447:1:exon

PLEKHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: PLEKHO1
note: pleckstrin homology domain containing O1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 196073..211604
location: region:196073-211604:1
so has part: feature:196073-211604:1:exon
subclass of: SO_0000010

426108
type: Gene
SIO_000068: ncbigene

position:196073:1
position: 196073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211604:1
position: 211604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196073-211604:1:exon

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001397383.1
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196073..196314,197001..197147,203010..203150,204117..204221,205263..205364,205958..211604)
location: region:196073-211604:1
so has part: feature:196073-196314:1:exon
so has part: feature:197001-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-211604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196073-196314:1:exon

position:196314:1
position: 196314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197001-197147:1:exon

position:197001:1
position: 197001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197147:1
position: 197147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

position:203010:1
position: 203010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203150:1
position: 203150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

position:204117:1
position: 204117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204221:1
position: 204221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

position:205263:1
position: 205263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205364:1
position: 205364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:205958-211604:1:exon

position:205958:1
position: 205958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001031356.2
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196073..196314,197001..197147,203010..203150,204117..204221,205263..205364,205958..206709,209146..211604)
location: region:196073-211604:1
so has part: feature:196073-196314:1:exon
so has part: feature:197001-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206709:1:exon
so has part: feature:209146-211604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196073-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197001-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206709:1:exon

position:206709:1
position: 206709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:209146-211604:1:exon

position:209146:1
position: 209146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001397385.1
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196073..196314,197010..197147,203010..203150,204117..204221,205263..205364,205958..211604)
location: region:196073-211604:1
so has part: feature:196073-196314:1:exon
so has part: feature:197010-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-211604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196073-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197010-197147:1:exon

position:197010:1
position: 197010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-211604:1:exon

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001397384.1
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196073..196314,197010..197147,203010..203150,204117..204221,205263..205364,205958..206709,206824..211604)
location: region:196073-211604:1
so has part: feature:196073-196314:1:exon
so has part: feature:197010-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206709:1:exon
so has part: feature:206824-211604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196073-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197010-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206824-211604:1:exon

position:206824:1
position: 206824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant 5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001397386.1
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196073..196314,197010..197147,203010..203150,204117..204221,205263..205364,205958..206709,209146..211604)
location: region:196073-211604:1
so has part: feature:196073-196314:1:exon
so has part: feature:197010-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206709:1:exon
so has part: feature:209146-211604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196073-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197010-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209146-211604:1:exon

PLEKHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PLEKHO1
product: pleckstrin homology domain containing O1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652357.2
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196073..196314,197001..197147,203010..203150,204117..204221,205263..205364,205958..206709,206824..209286)
location: region:196073-209286:1
so has part: feature:196073-196314:1:exon
so has part: feature:197001-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206709:1:exon
so has part: feature:206824-209286:1:exon

position:209286:1
position: 209286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196073-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197001-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206824-209286:1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PLEKHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform X1
translation: MKKNNSAKRGQQDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEAFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNMAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEEHSTCEESFRVDLDKSVAQLAAGRRRSDSENVKLSEKGRSGTLPRHEVTSWDKPTQRKDSLDKGTVYTPQVPKKLSHSEKNKCASMEEILSRRDSAHRAVLRRGLEAHCTAAEPEQLSRLQELVALKLEKTQELLTEVKGYGEGKRKVKDCATSTTTSSSSSSSRSDCERILQESERLLGEASSTWSQARRVLQEVRELRDLYRQIELQQVDCNPKQSSQYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196288..196314,197001..197147,203010..203150,204117..204221,205263..205364,205958..206707)
location: region:196288-206707:1
so has part: feature:196288-196314:1:exon
so has part: feature:197001-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206707:1:exon

XP_040508291.1
type: Protein
SIO_000068: ncbiprotein

position:196288:1
position: 196288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206707:1
position: 206707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196288-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197001-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206707:1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PLEKHO1
note: isoform 1 is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform 1
translation: MKKNNSAKRGQQDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEAFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNMAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEEHSTCEESFRVDLDKSVAQLAAGRRRSDSENVKLSEKGRSGTLPRHEVTSWDKPTQRKDSLDKGTVYTPQVPKKLSHSEKNKCASMEEILSRRDSAHRAVLRRGLEAHCTAAEPEQLSRLQELVALKLEKTQELLTEVKGYGEGKRKVKDCATSTTTSSSSSSSRSDCERILQESERLLGEASSTWSQARRVLQEVRELRDLYRQIELQQVDCNPKQSSQYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196288..196314,197001..197147,203010..203150,204117..204221,205263..205364,205958..206707)
location: region:196288-206707:1
so has part: feature:196288-196314:1:exon
so has part: feature:197001-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206707:1:exon

NP_001026527.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196288-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197001-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206707:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196288..196314,197001..197036)
location: region:196288-197036:1
so has part: feature:196288-196314:1:exon
so has part: feature:197001-197036:1:exon

position:197036:1
position: 197036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196288-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197001-197036:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 203076..203135
location: region:203076-203135:1
so has part: feature:203076-203135:1:exon

position:203076:1
position: 203076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203135:1
position: 203135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203076-203135:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 206084..206266
location: region:206084-206266:1
so has part: feature:206084-206266:1:exon

position:206084:1
position: 206084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206266:1
position: 206266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206084-206266:1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PLEKHO1
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform 1
translation: MKKNNSAKRGQQDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEAFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNMAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEEHSTCEESFRVDLDKSVAQLAAGRRRSDSENVKLSEKGRSGTLPRHEVTSWDKPTQRKDSLDKGTVYTPQVPKKLSHSEKNKCASMEEILSRRDSAHRAVLRRGLEAHCTAAEPEQLSRLQELVALKLEKTQELLTEVKGYGEGKRKVKDCATSTTTSSSSSSSRSDCERILQESERLLGEASSTWSQARRVLQEVRELRDLYRQIELQQVDCNPKQSSQYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196288..196314,197001..197147,203010..203150,204117..204221,205263..205364,205958..206707)
location: region:196288-206707:1
so has part: feature:196288-196314:1:exon
so has part: feature:197001-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206707:1:exon

NP_001384312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196288-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197001-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206707:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196288..196314,197001..197036)
location: region:196288-197036:1
so has part: feature:196288-196314:1:exon
so has part: feature:197001-197036:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196288-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197001-197036:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 203076..203135
location: region:203076-203135:1
so has part: feature:203076-203135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203076-203135:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 206084..206266
location: region:206084-206266:1
so has part: feature:206084-206266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206084-206266:1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PLEKHO1
note: isoform 2 is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform 2
translation: MKKNNSAKRDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEAFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNMAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEEHSTCEESFRVDLDKSVAQLAAGRRRSDSENVKLSEKGRSGTLPRHEVTSWDKPTQRKDSLDKGTVYTPQVPKKLSHSEKNKCASMEEILSRRDSAHRAVLRRGLEAHCTAAEPEQLSRLQELVALKLEKTQELLTEVKGYGEGKRKVKDCATSTTTSSSSSSSRSDCERILQESERLLGEASSTWSQARRVLQEVRELRDLYRQIELQQVDCNPKQSSQYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196288..196314,197010..197147,203010..203150,204117..204221,205263..205364,205958..206707)
location: region:196288-206707:1
so has part: feature:196288-196314:1:exon
so has part: feature:197010-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206707:1:exon

NP_001384314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196288-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197010-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206707:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 203076..203135
location: region:203076-203135:1
so has part: feature:203076-203135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203076-203135:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 206084..206266
location: region:206084-206266:1
so has part: feature:206084-206266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206084-206266:1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PLEKHO1
note: isoform 2 is encoded by transcript variant 5; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform 2
translation: MKKNNSAKRDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEAFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNMAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEEHSTCEESFRVDLDKSVAQLAAGRRRSDSENVKLSEKGRSGTLPRHEVTSWDKPTQRKDSLDKGTVYTPQVPKKLSHSEKNKCASMEEILSRRDSAHRAVLRRGLEAHCTAAEPEQLSRLQELVALKLEKTQELLTEVKGYGEGKRKVKDCATSTTTSSSSSSSRSDCERILQESERLLGEASSTWSQARRVLQEVRELRDLYRQIELQQVDCNPKQSSQYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196288..196314,197010..197147,203010..203150,204117..204221,205263..205364,205958..206707)
location: region:196288-206707:1
so has part: feature:196288-196314:1:exon
so has part: feature:197010-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206707:1:exon

NP_001384315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196288-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197010-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206707:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 203076..203135
location: region:203076-203135:1
so has part: feature:203076-203135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203076-203135:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 206084..206266
location: region:206084-206266:1
so has part: feature:206084-206266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206084-206266:1:exon

PLEKHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PLEKHO1
note: isoform 2 is encoded by transcript variant 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: pleckstrin homology domain-containing family O member 1 isoform 2
translation: MKKNNSAKRDGNQQSAQPEKVGWVRKFCGKGIFREIWKNRYVVLKGDQLYISEKEVKDEKNVQEAFDLSDYEKCEELRKSKSRSKKNHSKFTLAHSRQPGNMAPNLIFLAVSPEEKESWINALNSAITRAKNRILDEVTVEEDSYLAHPTRDRAKIQHSRRPPTRGHLMAVASTSTSDGMLTLDLIQEEDASPEEHSTCEESFRVDLDKSVAQLAAGRRRSDSENVKLSEKGRSGTLPRHEVTSWDKPTQRKDSLDKGTVYTPQVPKKLSHSEKNKCASMEEILSRRDSAHRAVLRRGLEAHCTAAEPEQLSRLQELVALKLEKTQELLTEVKGYGEGKRKVKDCATSTTTSSSSSSSRSDCERILQESERLLGEASSTWSQARRVLQEVRELRDLYRQIELQQVDCNPKQSSQYRKSMM
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: join(196288..196314,197010..197147,203010..203150,204117..204221,205263..205364,205958..206707)
location: region:196288-206707:1
so has part: feature:196288-196314:1:exon
so has part: feature:197010-197147:1:exon
so has part: feature:203010-203150:1:exon
so has part: feature:204117-204221:1:exon
so has part: feature:205263-205364:1:exon
so has part: feature:205958-206707:1:exon

NP_001384313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196288-196314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197010-197147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203010-203150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204117-204221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205263-205364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206707:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 203076..203135
location: region:203076-203135:1
so has part: feature:203076-203135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203076-203135:1:exon

PLEKHO1
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: PLEKHO1
note: propagated from UniProtKB/Swiss-Prot (Q5F3C8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PLEKHO1
subclass of: SO_0000673
so part of: PLEKHO1
location: 206084..206266
location: region:206084-206266:1
so has part: feature:206084-206266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206084-206266:1:exon

ANP32E
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ANP32E
note: acidic nuclear phosphoprotein 32 family member E; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(224227..246003)
location: region:224227-246003:-1
so has part: feature:224227-246003:-1:exon
subclass of: SO_0000010

426109
type: Gene
SIO_000068: ncbigene

position:224227:-1
position: 224227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246003:-1
position: 246003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224227-246003:-1:exon

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652361.2
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(224227..225264,233250..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..246003))
location: region:224227-246003:-1
so has part: feature:245743-246003:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:233250-233295:-1:exon
so has part: feature:224227-225264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245743-246003:-1:exon

position:245743:-1
position: 245743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

position:243472:-1
position: 243472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243621:-1
position: 243621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

position:242703:-1
position: 242703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242825:-1
position: 242825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

position:241165:-1
position: 241165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241330:-1
position: 241330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

position:239331:-1
position: 239331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239485:-1
position: 239485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

position:238175:-1
position: 238175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238229:-1
position: 238229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

position:233722:-1
position: 233722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233770:-1
position: 233770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:233250-233295:-1:exon

position:233250:-1
position: 233250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233295:-1
position: 233295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:224227-225264:-1:exon

position:225264:-1
position: 225264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1
translation: MEMKKRINLELRNQAPEEVTELVLDNCKSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFNCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDDDDEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEVCYICEEKAVFGNAVQRWASHCLYLGISPAFLVAGVLSVNTISYHTWELLGTFFFSFQPGNKWVIQKCVSQYLKSILLNVVT
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(225112..225264,233250..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..245796))
location: region:225112-245796:-1
so has part: feature:245743-245796:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:233250-233295:-1:exon
so has part: feature:225112-225264:-1:exon

XP_040508295.1
type: Protein
SIO_000068: ncbiprotein

position:225112:-1
position: 225112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245796:-1
position: 245796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-245796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233250-233295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225112-225264:-1:exon

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652363.2
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(227002..227310,233250..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..246003))
location: region:227002-246003:-1
so has part: feature:245743-246003:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:233250-233295:-1:exon
so has part: feature:227002-227310:-1:exon

position:227002:-1
position: 227002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-246003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233250-233295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227002-227310:-1:exon

position:227310:-1
position: 227310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANP32E
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_005841795.2
SIO_010081: ANP32E
so part of: ANP32E
location: complement(join(227002..227310,230993..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..246003))
location: region:227002-246003:-1
so has part: feature:245743-246003:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:230993-233295:-1:exon
so has part: feature:227002-227310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245743-246003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:230993-233295:-1:exon

position:230993:-1
position: 230993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:227002-227310:-1:exon

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X3
translation: MEMKKRINLELRNQAPEEVTELVLDNCKSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFNCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDDDDEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEVCYICEEKAVFGNAVQRWASHCLYLGISPAFLEHGRSAGLAGRTWPLE
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(227260..227310,233250..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..245796))
location: region:227260-245796:-1
so has part: feature:245743-245796:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:233250-233295:-1:exon
so has part: feature:227260-227310:-1:exon

XP_040508297.1
type: Protein
SIO_000068: ncbiprotein

position:227260:-1
position: 227260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-245796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233250-233295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227260-227310:-1:exon

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040652362.2
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(228336..228710,233250..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..246003))
location: region:228336-246003:-1
so has part: feature:245743-246003:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:233250-233295:-1:exon
so has part: feature:228336-228710:-1:exon

position:228336:-1
position: 228336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-246003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233250-233295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228336-228710:-1:exon

position:228710:-1
position: 228710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X2
translation: MEMKKRINLELRNQAPEEVTELVLDNCKSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFNCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDDDDEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEVCYICEEKAVFGNAVQRWASHCLYLGISPAFLLFMTISSSRSTGDKLFGCDGSRAQSQSLLF
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(228618..228710,233250..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..245796))
location: region:228618-245796:-1
so has part: feature:245743-245796:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:233250-233295:-1:exon
so has part: feature:228618-228710:-1:exon

XP_040508296.1
type: Protein
SIO_000068: ncbiprotein

position:228618:-1
position: 228618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-245796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233250-233295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228618-228710:-1:exon

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040652364.2
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(228759..228797,233250..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..246003))
location: region:228759-246003:-1
so has part: feature:245743-246003:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:233250-233295:-1:exon
so has part: feature:228759-228797:-1:exon

position:228759:-1
position: 228759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-246003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233250-233295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228759-228797:-1:exon

position:228797:-1
position: 228797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X4
translation: MEMKKRINLELRNQAPEEVTELVLDNCKSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFNCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDDDDEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEVCYICEEKAVFGNAVQRWASHCLYLGISPAFLMFPVWHD
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(228774..228797,233250..233295,233722..233770,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..245796))
location: region:228774-245796:-1
so has part: feature:245743-245796:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233722-233770:-1:exon
so has part: feature:233250-233295:-1:exon
so has part: feature:228774-228797:-1:exon

XP_040508298.1
type: Protein
SIO_000068: ncbiprotein

position:228774:-1
position: 228774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-245796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233722-233770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233250-233295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228774-228797:-1:exon

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298326.4
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(233784..236602,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..246003))
location: region:233784-246003:-1
so has part: feature:245743-246003:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233784-236602:-1:exon

position:233784:-1
position: 233784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-246003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233784-236602:-1:exon

position:236602:-1
position: 236602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANP32E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ANP32E
product: acidic nuclear phosphoprotein 32 family member E
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001006564.3
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(233784..236605,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..246003))
location: region:233784-246003:-1
so has part: feature:245743-246003:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:233784-236605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245743-246003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233784-236605:-1:exon

position:236605:-1
position: 236605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X5
translation: MEMKKRINLELRNQAPEEVTELVLDNCKSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFNCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDDDDEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEEGIRGEKRKRDPEDEGEEEDD
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(236538..236602,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..245796))
location: region:236538-245796:-1
so has part: feature:245743-245796:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:236538-236602:-1:exon

XP_015153812.1
type: Protein
SIO_000068: ncbiprotein

position:236538:-1
position: 236538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245743-245796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236538-236602:-1:exon

ANP32E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ANP32E
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E
translation: MEMKKRINLELRNQAPEEVTELVLDNCKSSNGEIEGLNDSFKELEFLSMANVQLTSLAKLPTLSKLRKLELSDNIISGGLEVLAERCPNLTYLNLSGNKIKDLGTVEALQNLKNLKSLDLFNCEITNLEDYRDSIFDLLQQITYLDGFDQEDNEAPDSEDDDDEGDEDDNDEDEDEAGPPGEYEEEDDEDDGGSDLGEGEEEEEVGLSYLMKEEIQDEDDDDDYVEEGGDEEEEAEGIRGEKRKRDPEDEGEEEDD
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(236538..236605,238175..238229,239331..239485,241165..241330,242703..242825,243472..243621,245743..245796))
location: region:236538-245796:-1
so has part: feature:245743-245796:-1:exon
so has part: feature:243472-243621:-1:exon
so has part: feature:242703-242825:-1:exon
so has part: feature:241165-241330:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:236538-236605:-1:exon

NP_001006564.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245743-245796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243472-243621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242703-242825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241165-241330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236538-236605:-1:exon

ANP32E
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ANP32E
note: propagated from UniProtKB/Swiss-Prot (Q5F4A3.1); Region: LRR 1
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(243484..243549)
location: region:243484-243549:-1
so has part: feature:243484-243549:-1:exon

position:243484:-1
position: 243484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243549:-1
position: 243549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243484-243549:-1:exon

ANP32E
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ANP32E
note: propagated from UniProtKB/Swiss-Prot (Q5F4A3.1); Region: LRR 2
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(242769..242825,243472..243483))
location: region:242769-243483:-1
so has part: feature:243472-243483:-1:exon
so has part: feature:242769-242825:-1:exon

position:242769:-1
position: 242769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243483:-1
position: 243483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243472-243483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242769-242825:-1:exon

ANP32E
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ANP32E
note: propagated from UniProtKB/Swiss-Prot (Q5F4A3.1); Region: LRR 3
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(241328..241330,242703..242765))
location: region:241328-242765:-1
so has part: feature:242703-242765:-1:exon
so has part: feature:241328-241330:-1:exon

position:241328:-1
position: 241328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242765:-1
position: 242765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242703-242765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241328-241330:-1:exon

ANP32E
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ANP32E
note: propagated from UniProtKB/Swiss-Prot (Q5F4A3.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(236541..236605,238175..238229,239331..239485,241165..241219))
location: region:236541-241219:-1
so has part: feature:241165-241219:-1:exon
so has part: feature:239331-239485:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:236541-236605:-1:exon

position:236541:-1
position: 236541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241219:-1
position: 241219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241165-241219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239331-239485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236541-236605:-1:exon

ANP32E
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
gene: ANP32E
note: propagated from UniProtKB/Swiss-Prot (Q5F4A3.1); Region: ZID domain. /evidence=ECO:0000250
SIO_010081: ANP32E
subclass of: SO_0000673
so part of: ANP32E
location: complement(join(236541..236605,238175..238229,239331..239369))
location: region:236541-239369:-1
so has part: feature:239331-239369:-1:exon
so has part: feature:238175-238229:-1:exon
so has part: feature:236541-236605:-1:exon

position:239369:-1
position: 239369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239331-239369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238175-238229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236541-236605:-1:exon

LMNA
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
note: lamin A/C; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<319313..338690)
location: region:319313-338690:-1
so has part: feature:319313-338690:-1:exon
subclass of: SO_0000010

396224
type: Gene
SIO_000068: ncbigene

position:319313:-1
position: 319313
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:338690:-1
position: 338690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319313-338690:-1:exon

LMNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
product: lamin A/C
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_205287.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel and aligns at 29% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_205287.1
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(<319313..319472,338153..338690))
location: region:319313-338690:-1
so has part: feature:338153-338690:-1:exon
so has part: feature:319313-319472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338153-338690:-1:exon

position:338153:-1
position: 338153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319313-319472:-1:exon

position:319472:-1
position: 319472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
inference: similar to AA sequence (same species):RefSeq:NP_990618.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution and aligns at 25% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: lamin-A
translation: MSTPSQRRSGRGGGPSGTPLSPTRITRLQEKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVVSREVSGIKAAYEAELADARKTLDSVAKERARLQLELSKVREEHKELKARNAKKEADLLAAQARLKDLEALLNSKEAALSTALGEKRNLENEVRDLRAQVAKLEGALSEAKKQLQDEMLRRVDAENRLQTLKEELEFQKNIYSEELRETKRRHETRLVEIDNGRQQEFESKLAEALQDLRRQHEDQIRHYRDELEKTYGAKLENAKQSAERNSSMAGAAHEELQQTHIRIDSLSAELSQLQKQLAAKEAKLREVEEALSREREGGRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPSSQRGARSSGLQHSGAGSAKKRRLEDGEGREGREGRTSFSHHARTSGRVGVEEVDLEGRFVRLRNKSNEDQALGNWQVKRQNGDDPPLTYRFPPKFTLKAGQAVTIWASGAGATHSPPSDVVWKAQSSWGSGDSLRTALINSNGEEVAMRKLVRTVIINDDDEDEEDDEVSIHHRHHHSGCSGSADPAEYNLRSRTVLCGTCGQPADKGSAAAASSASSASTVTVSRGYRSSGGGIGEGLLGRSYVLGGAGPRRQAPAPQGCSIM
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(<319313..319472,338153..338505))
location: region:319313-338505:-1
so has part: feature:338153-338505:-1:exon
so has part: feature:319313-319472:-1:exon

NP_990618.1
type: Protein
SIO_000068: ncbiprotein

position:338505:-1
position: 338505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338153-338505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319313-319472:-1:exon

LMNA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
note: propagated from UniProtKB/Swiss-Prot (P13648.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(338434..338505)
location: region:338434-338505:-1
so has part: feature:338434-338505:-1:exon

position:338434:-1
position: 338434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338434-338505:-1:exon

LMNA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
note: propagated from UniProtKB/Swiss-Prot (P13648.1); Region: Head
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(338410..338502)
location: region:338410-338502:-1
so has part: feature:338410-338502:-1:exon

position:338410:-1
position: 338410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338502:-1
position: 338502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338410-338502:-1:exon

LMNA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
note: N-acetylserine. /evidence=ECO:0000250; propagated from UniProtKB/Swiss-Prot (P13648.1); acetylation site
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(338500..338502)
location: region:338500-338502:-1
so has part: feature:338500-338502:-1:exon

position:338500:-1
position: 338500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338500-338502:-1:exon

LMNA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
note: propagated from UniProtKB/Swiss-Prot (P13648.1); Region: Coil 1A
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(338299..338409)
location: region:338299-338409:-1
so has part: feature:338299-338409:-1:exon

position:338299:-1
position: 338299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338409:-1
position: 338409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338299-338409:-1:exon

LMNA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
note: propagated from UniProtKB/Swiss-Prot (P13648.1); Region: Linker 1
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(338269..338298)
location: region:338269-338298:-1
so has part: feature:338269-338298:-1:exon

position:338269:-1
position: 338269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338298:-1
position: 338298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338269-338298:-1:exon

LMNA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9031
alternative label: lamin-A
gene: LMNA
gene synonym: lamin-A
note: propagated from UniProtKB/Swiss-Prot (P13648.1); Region: Coil 1B
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(319313..319472,338153..338268))
location: region:319313-338268:-1
so has part: feature:338153-338268:-1:exon
so has part: feature:319313-319472:-1:exon

position:338268:-1
position: 338268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338153-338268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319313-319472:-1:exon

MEX3A
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 363955..385550
location: region:363955-385550:1
so has part: feature:363955-385550:1:exon
subclass of: SO_0000010

101747646
type: Gene
SIO_000068: ncbigene

position:363955:1
position: 363955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385550:1
position: 385550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363955-385550:1:exon

MEX3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: MEX3A
product: mex-3 RNA binding family member A, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298339.4
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: join(363955..364439,375797..385550)
location: region:363955-385550:1
so has part: feature:363955-364439:1:exon
so has part: feature:375797-385550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363955-364439:1:exon

position:364439:1
position: 364439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:375797-385550:1:exon

position:375797:1
position: 375797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEX3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3A
translation: MPSLLVPGIMERNGGFGDLGCFGGSGKDRALLEDDRALQLALDQLCLLGLGEPSSSSSSSAAVLVEDSNNNNNNPPPPPPPQQPPPPNPPPPPQPQPPPPPPPPPPAPKGPSAAGGGAAEPKLCALYKEAELRLKSSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVAMARREIISAAEHFSMIRASRNKAGTTFGSAPTLPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNNENDFLSSSPDSSMENRYSEAWRVHTPAPGCKPLSTFRQNSLGCIGDCSVDPVYETPRLNDQNDFNYGYLFPNYGVNKQDLYYGVPESGAPMWAGQENTNPVSVLFSKQQRSSSTGAIHPNSHRSPSSSIQEPNLSALPRRSQGEPLQGFSKLGSTAAARTSVSSSRECMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHAAATQAIRIFS
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: join(363962..364439,375797..376902)
location: region:363962-376902:1
so has part: feature:363962-364439:1:exon
so has part: feature:375797-376902:1:exon

XP_015153825.3
type: Protein
SIO_000068: ncbiprotein

position:363962:1
position: 363962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376902:1
position: 376902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363962-364439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:375797-376902:1:exon

RAB2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: RAB2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(385506..390546)
location: region:385506-390546:-1
so has part: feature:385506-390546:-1:exon
subclass of: SO_0000010

100858328
type: Gene
SIO_000068: ncbigene

position:385506:-1
position: 385506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390546:-1
position: 390546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385506-390546:-1:exon

RAB2B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: RAB2B
product: RAB2B, member RAS oncogene family, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XR_006932116.1
SIO_010081: RAB2B
so part of: RAB2B
location: complement(join(385506..386046,386159..387577,388655..388735,388936..389129,389208..389403,390494..390546))
location: region:385506-390546:-1
so has part: feature:390494-390546:-1:exon
so has part: feature:389208-389403:-1:exon
so has part: feature:388936-389129:-1:exon
so has part: feature:388655-388735:-1:exon
so has part: feature:386159-387577:-1:exon
so has part: feature:385506-386046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:390494-390546:-1:exon

position:390494:-1
position: 390494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:389208-389403:-1:exon

position:389208:-1
position: 389208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389403:-1
position: 389403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:388936-389129:-1:exon

position:388936:-1
position: 388936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389129:-1
position: 389129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:388655-388735:-1:exon

position:388655:-1
position: 388655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388735:-1
position: 388735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:386159-387577:-1:exon

position:386159:-1
position: 386159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387577:-1
position: 387577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:385506-386046:-1:exon

position:386046:-1
position: 386046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RAB2B
product: RAB2B, member RAS oncogene family, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298341.4
SIO_010081: RAB2B
subclass of: SO_0000673
so part of: RAB2B
location: complement(join(385506..387577,388655..388735,388936..389129,389208..389403,390494..390546))
location: region:385506-390546:-1
so has part: feature:390494-390546:-1:exon
so has part: feature:389208-389403:-1:exon
so has part: feature:388936-389129:-1:exon
so has part: feature:388655-388735:-1:exon
so has part: feature:385506-387577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:390494-390546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389208-389403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388936-389129:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388655-388735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385506-387577:-1:exon

RAB2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: RAB2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-11A
translation: MRGKDEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAVPTDEARSFAERNGLSFLETSALDSTNVETAFHNILSEIYRSAAQRQIAAQPEAQFGPSSAVEPIRVLPTQDGRQAQCCQSI
SIO_010081: RAB2B
subclass of: SO_0000673
so part of: RAB2B
location: complement(join(387441..387577,388655..388735,388936..389129,389208..389403,390494..390533))
location: region:387441-390533:-1
so has part: feature:390494-390533:-1:exon
so has part: feature:389208-389403:-1:exon
so has part: feature:388936-389129:-1:exon
so has part: feature:388655-388735:-1:exon
so has part: feature:387441-387577:-1:exon

XP_015153827.3
type: Protein
SIO_000068: ncbiprotein

position:387441:-1
position: 387441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390533:-1
position: 390533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390494-390533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389208-389403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388936-389129:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388655-388735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387441-387577:-1:exon

RAB25
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(391268..397592)
location: region:391268-397592:-1
so has part: feature:391268-397592:-1:exon
subclass of: SO_0000010

100858582
type: Gene
SIO_000068: ncbigene

position:391268:-1
position: 391268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397592:-1
position: 397592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391268-397592:-1:exon

RAB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RAB25
product: RAB25, member RAS oncogene family
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298342.4
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(391268..391913,394417..394497,394583..394776,395778..395973,397258..397592))
location: region:391268-397592:-1
so has part: feature:397258-397592:-1:exon
so has part: feature:395778-395973:-1:exon
so has part: feature:394583-394776:-1:exon
so has part: feature:394417-394497:-1:exon
so has part: feature:391268-391913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397258-397592:-1:exon

position:397258:-1
position: 397258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:395778-395973:-1:exon

position:395778:-1
position: 395778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395973:-1
position: 395973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394583-394776:-1:exon

position:394583:-1
position: 394583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394776:-1
position: 394776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:394417-394497:-1:exon

position:394417:-1
position: 394417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394497:-1
position: 394497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:391268-391913:-1:exon

position:391913:-1
position: 391913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-25
translation: MSSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREVPTEEAKMFAENKGLLFIETSALDSTNVEEAFETVLKEIFGKVQKQKQRSSQSSTVSLGSESPDSAAAAQAEKRPCCVAI
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(391783..391913,394417..394497,394583..394776,395778..395973,397258..397297))
location: region:391783-397297:-1
so has part: feature:397258-397297:-1:exon
so has part: feature:395778-395973:-1:exon
so has part: feature:394583-394776:-1:exon
so has part: feature:394417-394497:-1:exon
so has part: feature:391783-391913:-1:exon

XP_015153828.1
type: Protein
SIO_000068: ncbiprotein

position:391783:-1
position: 391783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397297:-1
position: 397297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397258-397297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395778-395973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394583-394776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:394417-394497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391783-391913:-1:exon

LAMTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(397884..401231)
location: region:397884-401231:-1
so has part: feature:397884-401231:-1:exon
subclass of: SO_0000010

100859842
type: Gene
SIO_000068: ncbigene

position:397884:-1
position: 397884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401231:-1
position: 401231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397884-401231:-1:exon

LAMTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LAMTOR2
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298343.4
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(join(397884..398098,398397..398486,400691..400853,400968..401231))
location: region:397884-401231:-1
so has part: feature:400968-401231:-1:exon
so has part: feature:400691-400853:-1:exon
so has part: feature:398397-398486:-1:exon
so has part: feature:397884-398098:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400968-401231:-1:exon

position:400968:-1
position: 400968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400691-400853:-1:exon

position:400691:-1
position: 400691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400853:-1
position: 400853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398397-398486:-1:exon

position:398397:-1
position: 398397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398486:-1
position: 398486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:397884-398098:-1:exon

position:398098:-1
position: 398098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR2
translation: MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWVAYDKNGHHAFNEDNLRFILMDCMEGRVAITRVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQVAAS
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(join(398042..398098,398397..398486,400691..400853,400968..401035))
location: region:398042-401035:-1
so has part: feature:400968-401035:-1:exon
so has part: feature:400691-400853:-1:exon
so has part: feature:398397-398486:-1:exon
so has part: feature:398042-398098:-1:exon

XP_015153829.1
type: Protein
SIO_000068: ncbiprotein

position:398042:-1
position: 398042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401035:-1
position: 401035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400968-401035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400691-400853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398397-398486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398042-398098:-1:exon

UBQLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
alternative label: ubiquilin-4
gene: UBQLN4
gene synonym: ubiquilin-4
note: ubiquilin 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 401312..412628
location: region:401312-412628:1
so has part: feature:401312-412628:1:exon
subclass of: SO_0000010

426353
type: Gene
SIO_000068: ncbigene

position:401312:1
position: 401312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412628:1
position: 412628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401312-412628:1:exon

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
alternative label: ubiquilin-4
gene: UBQLN4
gene synonym: ubiquilin-4
product: ubiquilin 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001031373.2
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(401312..401479,403512..403663,405306..405511,405831..406093,407324..407482,408117..408342,408667..408806,409264..409347,409875..409990,410586..410763,411461..412628)
location: region:401312-412628:1
so has part: feature:401312-401479:1:exon
so has part: feature:403512-403663:1:exon
so has part: feature:405306-405511:1:exon
so has part: feature:405831-406093:1:exon
so has part: feature:407324-407482:1:exon
so has part: feature:408117-408342:1:exon
so has part: feature:408667-408806:1:exon
so has part: feature:409264-409347:1:exon
so has part: feature:409875-409990:1:exon
so has part: feature:410586-410763:1:exon
so has part: feature:411461-412628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401312-401479:1:exon

position:401479:1
position: 401479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403512-403663:1:exon

position:403512:1
position: 403512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403663:1
position: 403663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405306-405511:1:exon

position:405306:1
position: 405306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405511:1
position: 405511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405831-406093:1:exon

position:405831:1
position: 405831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406093:1
position: 406093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:407324-407482:1:exon

position:407324:1
position: 407324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407482:1
position: 407482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:408117-408342:1:exon

position:408117:1
position: 408117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408342:1
position: 408342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:408667-408806:1:exon

position:408667:1
position: 408667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408806:1
position: 408806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:409264-409347:1:exon

position:409264:1
position: 409264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409347:1
position: 409347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:409875-409990:1:exon

position:409875:1
position: 409875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409990:1
position: 409990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:410586-410763:1:exon

position:410586:1
position: 410586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410763:1
position: 410763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:411461-412628:1:exon

position:411461:1
position: 411461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
alternative label: ubiquilin-4
gene: UBQLN4
gene synonym: ubiquilin-4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ubiquilin-4
translation: MAEPSGGGGPGPGGPELGGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDPTSAASAPGAASAPTATSPSPAAPSQPSTSSSAAPDAGSGSRRSSGSGTLGGPGDGGPNSATSILSGFGGITGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLTGNSESSSSQPLRTENREPLPNPWSPSPPASQSQAPSSEGSTGSGSTQSTPTVSNPFGLNAASFGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPAGGGNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(401336..401479,403512..403663,405306..405511,405831..406093,407324..407482,408117..408342,408667..408806,409264..409347,409875..409990,410586..410763,411461..411613)
location: region:401336-411613:1
so has part: feature:401336-401479:1:exon
so has part: feature:403512-403663:1:exon
so has part: feature:405306-405511:1:exon
so has part: feature:405831-406093:1:exon
so has part: feature:407324-407482:1:exon
so has part: feature:408117-408342:1:exon
so has part: feature:408667-408806:1:exon
so has part: feature:409264-409347:1:exon
so has part: feature:409875-409990:1:exon
so has part: feature:410586-410763:1:exon
so has part: feature:411461-411613:1:exon

NP_001026544.2
type: Protein
SIO_000068: ncbiprotein

position:401336:1
position: 401336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411613:1
position: 411613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401336-401479:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403512-403663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405306-405511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405831-406093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:407324-407482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408117-408342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:408667-408806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409264-409347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409875-409990:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410586-410763:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:411461-411613:1:exon

LOC112530295
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC112530295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 420115..423308
location: region:420115-423308:1
so has part: feature:420115-423308:1:exon
subclass of: SO_0000010

112530295
type: Gene
SIO_000068: ncbigene

position:420115:1
position: 420115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423308:1
position: 423308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420115-423308:1:exon

LOC112530295
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC112530295
product: uncharacterized LOC112530295, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025143589.3
SIO_010081: LOC112530295
subclass of: SO_0000673
so part of: LOC112530295
location: join(420115..420361,420541..420644,420715..420821,420899..420985,422106..423308)
location: region:420115-423308:1
so has part: feature:420115-420361:1:exon
so has part: feature:420541-420644:1:exon
so has part: feature:420715-420821:1:exon
so has part: feature:420899-420985:1:exon
so has part: feature:422106-423308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420115-420361:1:exon

position:420361:1
position: 420361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:420541-420644:1:exon

position:420541:1
position: 420541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420644:1
position: 420644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420715-420821:1:exon

position:420715:1
position: 420715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420821:1
position: 420821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420899-420985:1:exon

position:420899:1
position: 420899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420985:1
position: 420985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:422106-423308:1:exon

position:422106:1
position: 422106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112530295
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC112530295
product: uncharacterized LOC112530295, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025143590.3
SIO_010081: LOC112530295
subclass of: SO_0000673
so part of: LOC112530295
location: join(420115..420361,420541..420644,420715..420821,422106..423308)
location: region:420115-423308:1
so has part: feature:420115-420361:1:exon
so has part: feature:420541-420644:1:exon
so has part: feature:420715-420821:1:exon
so has part: feature:422106-423308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420115-420361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420541-420644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420715-420821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422106-423308:1:exon

LOC112530295
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC112530295
product: uncharacterized LOC112530295, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025143592.3
SIO_010081: LOC112530295
subclass of: SO_0000673
so part of: LOC112530295
location: join(420115..420361,420541..420644,420715..420821,422127..423308)
location: region:420115-423308:1
so has part: feature:420115-420361:1:exon
so has part: feature:420541-420644:1:exon
so has part: feature:420715-420821:1:exon
so has part: feature:422127-423308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420115-420361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420541-420644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420715-420821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422127-423308:1:exon

position:422127:1
position: 422127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112530295
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC112530295
product: uncharacterized LOC112530295, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025143591.3
SIO_010081: LOC112530295
subclass of: SO_0000673
so part of: LOC112530295
location: join(420115..420361,420715..420821,420899..420985,422106..423308)
location: region:420115-423308:1
so has part: feature:420115-420361:1:exon
so has part: feature:420715-420821:1:exon
so has part: feature:420899-420985:1:exon
so has part: feature:422106-423308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420115-420361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420715-420821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420899-420985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422106-423308:1:exon

LOC112530295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC112530295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112530295 isoform X2
translation: MDQWRVGSRAAPIKARGRSAALPFGGWRFVALMVVRRPVLICPGRALRAAASVPEQHHCCGLLQQDLAELCTPIGIASVPTVTVRPFSVELRVQSPADWQSCIHVLLLNDGVSAGSSCEGPLLTLQDAFLLLWFGAPQDGPSSSAPPPTPGGLCLCFHLCRFPSSRPCRPLRRGWPHPFGSHRDGWTPSRSPLSLPFSGLNSPGSLSLSSQGDAPGPASPLSPPLGSLQEIAVCFVLGARN
SIO_010081: LOC112530295
subclass of: SO_0000673
so part of: LOC112530295
location: join(420199..420361,420715..420821,420899..420985,422106..422474)
location: region:420199-422474:1
so has part: feature:420199-420361:1:exon
so has part: feature:420715-420821:1:exon
so has part: feature:420899-420985:1:exon
so has part: feature:422106-422474:1:exon

XP_024999359.2
type: Protein
SIO_000068: ncbiprotein

position:420199:1
position: 420199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422474:1
position: 422474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420199-420361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420715-420821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420899-420985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422106-422474:1:exon

LOC112530295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC112530295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112530295 isoform X1
translation: MARRQPRSAYKSARTQRGAPFRGLAVRGADGRSSSRPHLPGPRFASGCVRSGCELPALGGGGASPWLESPAGSVEMESEQRAEQGAEQHHCCGLLQQDLAELCTPIGIASVPTVTVRPFSVELRVQSPADWQSCIHVLLLNDGVSAGSSCEGPLLTLQDAFLLLWFGAPQDGPSSSAPPPTPGGLCLCFHLCRFPSSRPCRPLRRGWPHPFGSHRDGWTPSRSPLSLPFSGLNSPGSLSLSSQGDAPGPASPLSPPLGSLQEIAVCFVLGARN
SIO_010081: LOC112530295
subclass of: SO_0000673
so part of: LOC112530295
location: join(420207..420361,420541..420644,420715..420821,420899..420985,422106..422474)
location: region:420207-422474:1
so has part: feature:420207-420361:1:exon
so has part: feature:420541-420644:1:exon
so has part: feature:420715-420821:1:exon
so has part: feature:420899-420985:1:exon
so has part: feature:422106-422474:1:exon

XP_024999357.2
type: Protein
SIO_000068: ncbiprotein

position:420207:1
position: 420207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420207-420361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420541-420644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420715-420821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420899-420985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422106-422474:1:exon

LOC112530295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC112530295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112530295 isoform X4
translation: MARRQPRSAYKSARTQRGAPFRGLAVRGADGRSSSRPHLPGPRFASGCVRSGCELPALGGGGASPWLESPAGSVEMESEQRAEQGAEQHHCCGLLQQDLAELCTPIGIASVPTVTVRPFSVEGPLLTLQDAFLLLWFGAPQDGPSSSAPPPTPGGLCLCFHLCRFPSSRPCRPLRRGWPHPFGSHRDGWTPSRSPLSLPFSGLNSPGSLSLSSQGDAPGPASPLSPPLGSLQEIAVCFVLGARN
SIO_010081: LOC112530295
subclass of: SO_0000673
so part of: LOC112530295
location: join(420207..420361,420541..420644,420715..420821,422106..422474)
location: region:420207-422474:1
so has part: feature:420207-420361:1:exon
so has part: feature:420541-420644:1:exon
so has part: feature:420715-420821:1:exon
so has part: feature:422106-422474:1:exon

XP_024999358.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420207-420361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420541-420644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420715-420821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422106-422474:1:exon

LOC112530295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC112530295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112530295 isoform X3
translation: MARRQPRSAYKSARTQRGAPFRGLAVRGADGRSSSRPHLPGPRFASGCVRSGCELPALGGGGASPWLESPAGSVEMESEQRAEQGAEQHHCCGLLQQDLAELCTPIGIASVPTVTVRPFSVEDAFLLLWFGAPQDGPSSSAPPPTPGGLCLCFHLCRFPSSRPCRPLRRGWPHPFGSHRDGWTPSRSPLSLPFSGLNSPGSLSLSSQGDAPGPASPLSPPLGSLQEIAVCFVLGARN
SIO_010081: LOC112530295
subclass of: SO_0000673
so part of: LOC112530295
location: join(420207..420361,420541..420644,420715..420821,422127..422474)
location: region:420207-422474:1
so has part: feature:420207-420361:1:exon
so has part: feature:420541-420644:1:exon
so has part: feature:420715-420821:1:exon
so has part: feature:422127-422474:1:exon

XP_024999360.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420207-420361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420541-420644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420715-420821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422127-422474:1:exon

GPATCH4
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 424187..428622
location: region:424187-428622:1
so has part: feature:424187-428622:1:exon
subclass of: SO_0000010

100859444
type: Gene
SIO_000068: ncbigene

position:424187:1
position: 424187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428622:1
position: 428622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424187-428622:1:exon

GPATCH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: GPATCH4
product: G-patch domain containing 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_015298336.3
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: join(424187..424740,424808..424881,425317..425409,426465..426572,427593..427699,427789..427839,427932..428622)
location: region:424187-428622:1
so has part: feature:424187-424740:1:exon
so has part: feature:424808-424881:1:exon
so has part: feature:425317-425409:1:exon
so has part: feature:426465-426572:1:exon
so has part: feature:427593-427699:1:exon
so has part: feature:427789-427839:1:exon
so has part: feature:427932-428622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424187-424740:1:exon

position:424740:1
position: 424740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424808-424881:1:exon

position:424808:1
position: 424808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424881:1
position: 424881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425317-425409:1:exon

position:425317:1
position: 425317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425409:1
position: 425409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426465-426572:1:exon

position:426465:1
position: 426465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426572:1
position: 426572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427593-427699:1:exon

position:427593:1
position: 427593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427699:1
position: 427699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:427789-427839:1:exon

position:427789:1
position: 427789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427839:1
position: 427839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:427932-428622:1:exon

position:427932:1
position: 427932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4
translation: MRTPARKDPRACAAPAPPPSLRASVGHAHRGAAPRSVRGACADSGREGSGAAMSAAEPSGAGMRFAERQLRRHGWTRGRGLGKREDGIARPIRPSVKCGTAGVGHNAAEQFSFHWWDHVFNEAAANIAVRDEQDGVCVEARSEQRFGVSTKKPHKVPPPGSTLYGHFVKAATLTAHGEEPTKQRGGSESSEEEEEDKLDRSSARRLTDEELMRVCGGRTAHKGARHGLTMSAKLARLEQQERAFLAAKQHGGGGQPMPTQSSPPAELQDSRKKKKKKKKKREQSVDGADAEGLQSPEESGGEEEEKAERRKKKKKKKGKEKVEEVVEVMEMEAPPEDSGGAAEAEHSPGVGRKKKKKRRREAE
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: join(424509..424740,424808..424881,425317..425409,426465..426572,427593..427699,427789..427839,427932..428358)
location: region:424509-428358:1
so has part: feature:424509-424740:1:exon
so has part: feature:424808-424881:1:exon
so has part: feature:425317-425409:1:exon
so has part: feature:426465-426572:1:exon
so has part: feature:427593-427699:1:exon
so has part: feature:427789-427839:1:exon
so has part: feature:427932-428358:1:exon

XP_015153822.2
type: Protein
SIO_000068: ncbiprotein

position:424509:1
position: 424509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428358:1
position: 428358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424509-424740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424808-424881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425317-425409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426465-426572:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427593-427699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427789-427839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427932-428358:1:exon

APOA1BP
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: APOA1BP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(428586..431832)
location: region:428586-431832:-1
so has part: feature:428586-431832:-1:exon
subclass of: SO_0000010

426569
type: Gene
SIO_000068: ncbigene

position:428586:-1
position: 428586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431832:-1
position: 431832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428586-431832:-1:exon

APOA1BP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: APOA1BP
product: apolipoprotein A-I binding protein
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298337.4
SIO_010081: APOA1BP
subclass of: SO_0000673
so part of: APOA1BP
location: complement(join(428586..428914,428989..429136,430202..430315,430400..430510,430595..430703,431617..431832))
location: region:428586-431832:-1
so has part: feature:431617-431832:-1:exon
so has part: feature:430595-430703:-1:exon
so has part: feature:430400-430510:-1:exon
so has part: feature:430202-430315:-1:exon
so has part: feature:428989-429136:-1:exon
so has part: feature:428586-428914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431617-431832:-1:exon

position:431617:-1
position: 431617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430595-430703:-1:exon

position:430595:-1
position: 430595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430703:-1
position: 430703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:430400-430510:-1:exon

position:430400:-1
position: 430400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430510:-1
position: 430510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430202-430315:-1:exon

position:430202:-1
position: 430202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430315:-1
position: 430315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:428989-429136:-1:exon

position:428989:-1
position: 428989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429136:-1
position: 429136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:428586-428914:-1:exon

position:428914:-1
position: 428914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA1BP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: APOA1BP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase
translation: MRARRALGWGLGWGLGWRLGWGLGLLVAAGGRCPRRVWGPEWGSGRSPQRNMHGHSAGGPRYLGQEEAQAIDQELFTEYKFSVDQLMELAGLSCATAIAKAYPPGSFPTSPPAVLVVCGPGNNGGDGLVCARHLKMFGYHPTVHYPKRPNKPLFEGLTTQCQKMDIPFLSEFPTEAALIDGLYGLVVDAIFGFSFKGAVREPFGSILSTLQRITVPIASIDIPSGWDVEKGRADGLRPDMLISLTAPKKAAAHFSGRYHFLGGRFVPAALEEKYGLNLPPYPGTECVLQLP
SIO_010081: APOA1BP
subclass of: SO_0000673
so part of: APOA1BP
location: complement(join(428712..428914,428989..429136,430202..430315,430400..430510,430595..430703,431617..431807))
location: region:428712-431807:-1
so has part: feature:431617-431807:-1:exon
so has part: feature:430595-430703:-1:exon
so has part: feature:430400-430510:-1:exon
so has part: feature:430202-430315:-1:exon
so has part: feature:428989-429136:-1:exon
so has part: feature:428712-428914:-1:exon

XP_015153823.3
type: Protein
SIO_000068: ncbiprotein

position:428712:-1
position: 428712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431807:-1
position: 431807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431617-431807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430595-430703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430400-430510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430202-430315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:428989-429136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428712-428914:-1:exon

TTC24
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(435057..438818)
location: region:435057-438818:-1
so has part: feature:435057-438818:-1:exon
subclass of: SO_0000010

101747902
type: Gene
SIO_000068: ncbigene

position:435057:-1
position: 435057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438818:-1
position: 438818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435057-438818:-1:exon

TTC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: TTC24
product: tetratricopeptide repeat domain 24, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025143532.2
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(435057..435321,435581..435645,435728..435798,435982..436071,436160..436281,436411..436539,436609..436821,437615..438369,438684..438818))
location: region:435057-438818:-1
so has part: feature:438684-438818:-1:exon
so has part: feature:437615-438369:-1:exon
so has part: feature:436609-436821:-1:exon
so has part: feature:436411-436539:-1:exon
so has part: feature:436160-436281:-1:exon
so has part: feature:435982-436071:-1:exon
so has part: feature:435728-435798:-1:exon
so has part: feature:435581-435645:-1:exon
so has part: feature:435057-435321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438684-438818:-1:exon

position:438684:-1
position: 438684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437615-438369:-1:exon

position:437615:-1
position: 437615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438369:-1
position: 438369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436609-436821:-1:exon

position:436609:-1
position: 436609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436821:-1
position: 436821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436411-436539:-1:exon

position:436411:-1
position: 436411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436539:-1
position: 436539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:436160-436281:-1:exon

position:436160:-1
position: 436160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436281:-1
position: 436281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435982-436071:-1:exon

position:435982:-1
position: 435982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436071:-1
position: 436071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:435728-435798:-1:exon

position:435728:-1
position: 435728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435798:-1
position: 435798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:435581-435645:-1:exon

position:435581:-1
position: 435581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435645:-1
position: 435645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:435057-435321:-1:exon

position:435321:-1
position: 435321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24
translation: MGHTGTWRTPRCSPHSRWLSSPLPMASEEPTTPPAPAAPGRKRRRKGKEKPILGEGDNAEDGDDGAGRVAEIEGLTRAGCRALGLGDTRGALGCFRRAVGLSLRTPTPRLRRDCAFRLGAAYVEAGKPRKGLKFLLKSQPSDGERPEGLRFDVAAAHEGLRDFPEDLRGSGGAAPRAGSSAVMGCCYLGMREPDRAARCFLEAARGYAGIHRPEAAAVALSRASGSMLQSGRFGAAEVAGTLAQCRALCDSIPDPTLQGKLYNDIGLGYSQLRIFPLAAESFERALTACRGAPGCSGEAAVLQNLGAARNALRRFNAALAPHRRAAALHGAAGNRRAQGQCFGNLAYAFSQLGEHEAAAENYLHALQAFRDSGDVHGQCKACEGLGAARFHLGDPQRAVGHYQEALRLLSRCQGTPRADGERIVTELTRTLQLQLCLRPTPALDLVPLQFCSPLPHISGTQLRGRTVSFRDTARGGGEAAQGDPPRGSAPKLRHPPALPPSIPAVIALRAAPEPPRSTRAGPGGRGGCTVLSQLCSLL
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(435170..435321,435581..435645,435728..435798,435982..436071,436160..436281,436411..436539,436609..436821,437615..438369,438684..438703))
location: region:435170-438703:-1
so has part: feature:438684-438703:-1:exon
so has part: feature:437615-438369:-1:exon
so has part: feature:436609-436821:-1:exon
so has part: feature:436411-436539:-1:exon
so has part: feature:436160-436281:-1:exon
so has part: feature:435982-436071:-1:exon
so has part: feature:435728-435798:-1:exon
so has part: feature:435581-435645:-1:exon
so has part: feature:435170-435321:-1:exon

XP_024999300.2
type: Protein
SIO_000068: ncbiprotein

position:435170:-1
position: 435170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438703:-1
position: 438703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438684-438703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437615-438369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436609-436821:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436411-436539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436160-436281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435982-436071:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:435728-435798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435581-435645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:435170-435321:-1:exon

LOC101749531
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101749531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 442278..475654
location: region:442278-475654:1
so has part: feature:442278-475654:1:exon
subclass of: SO_0000010

101749531
type: Gene
SIO_000068: ncbigene

position:442278:1
position: 442278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475654:1
position: 475654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442278-475654:1:exon

LOC101749531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101749531
product: ras GTPase-activating-like protein IQGAP3-like
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_040652464.2
SIO_010081: LOC101749531
subclass of: SO_0000673
so part of: LOC101749531
location: join(442278..442336,442806..442893,443117..443273,443512..443589,444262..444338,444495..444562,444678..444791,444907..445082,445254..445332,445461..445624,445707..445794,446358..446521,446619..446779,447460..447584,447701..447864,448091..448181,448827..448994,449077..449219,454651..454809,455775..455858,456967..457038,458628..458697,459967..460176,460606..460758,460853..461016,462889..463113,465540..465680,466111..466195,467112..467344,468775..468907,469886..469988,470292..470433,470570..470657,471147..471359,472305..472471,472590..472691,474573..474681,474789..475654)
location: region:442278-475654:1
so has part: feature:442278-442336:1:exon
so has part: feature:442806-442893:1:exon
so has part: feature:443117-443273:1:exon
so has part: feature:443512-443589:1:exon
so has part: feature:444262-444338:1:exon
so has part: feature:444495-444562:1:exon
so has part: feature:444678-444791:1:exon
so has part: feature:444907-445082:1:exon
so has part: feature:445254-445332:1:exon
so has part: feature:445461-445624:1:exon
so has part: feature:445707-445794:1:exon
so has part: feature:446358-446521:1:exon
so has part: feature:446619-446779:1:exon
so has part: feature:447460-447584:1:exon
so has part: feature:447701-447864:1:exon
so has part: feature:448091-448181:1:exon
so has part: feature:448827-448994:1:exon
so has part: feature:449077-449219:1:exon
so has part: feature:454651-454809:1:exon
so has part: feature:455775-455858:1:exon
so has part: feature:456967-457038:1:exon
so has part: feature:458628-458697:1:exon
so has part: feature:459967-460176:1:exon
so has part: feature:460606-460758:1:exon
so has part: feature:460853-461016:1:exon
so has part: feature:462889-463113:1:exon
so has part: feature:465540-465680:1:exon
so has part: feature:466111-466195:1:exon
so has part: feature:467112-467344:1:exon
so has part: feature:468775-468907:1:exon
so has part: feature:469886-469988:1:exon
so has part: feature:470292-470433:1:exon
so has part: feature:470570-470657:1:exon
so has part: feature:471147-471359:1:exon
so has part: feature:472305-472471:1:exon
so has part: feature:472590-472691:1:exon
so has part: feature:474573-474681:1:exon
so has part: feature:474789-475654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442278-442336:1:exon

position:442336:1
position: 442336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442806-442893:1:exon

position:442806:1
position: 442806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442893:1
position: 442893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443117-443273:1:exon

position:443117:1
position: 443117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443273:1
position: 443273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:443512-443589:1:exon

position:443512:1
position: 443512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443589:1
position: 443589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:444262-444338:1:exon

position:444262:1
position: 444262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444338:1
position: 444338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444495-444562:1:exon

position:444495:1
position: 444495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444562:1
position: 444562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:444678-444791:1:exon

position:444678:1
position: 444678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444791:1
position: 444791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:444907-445082:1:exon

position:444907:1
position: 444907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445082:1
position: 445082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:445254-445332:1:exon

position:445254:1
position: 445254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445332:1
position: 445332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:445461-445624:1:exon

position:445461:1
position: 445461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445624:1
position: 445624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:445707-445794:1:exon

position:445707:1
position: 445707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445794:1
position: 445794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:446358-446521:1:exon

position:446358:1
position: 446358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446521:1
position: 446521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:446619-446779:1:exon

position:446619:1
position: 446619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446779:1
position: 446779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:447460-447584:1:exon

position:447460:1
position: 447460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447584:1
position: 447584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:447701-447864:1:exon

position:447701:1
position: 447701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447864:1
position: 447864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:448091-448181:1:exon

position:448091:1
position: 448091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448181:1
position: 448181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:448827-448994:1:exon

position:448827:1
position: 448827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448994:1
position: 448994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:449077-449219:1:exon

position:449077:1
position: 449077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449219:1
position: 449219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:454651-454809:1:exon

position:454651:1
position: 454651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454809:1
position: 454809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:455775-455858:1:exon

position:455775:1
position: 455775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455858:1
position: 455858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:456967-457038:1:exon

position:456967:1
position: 456967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457038:1
position: 457038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:458628-458697:1:exon

position:458628:1
position: 458628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458697:1
position: 458697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:459967-460176:1:exon

position:459967:1
position: 459967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460176:1
position: 460176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:460606-460758:1:exon

position:460606:1
position: 460606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460758:1
position: 460758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:460853-461016:1:exon

position:460853:1
position: 460853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461016:1
position: 461016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:462889-463113:1:exon

position:462889:1
position: 462889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463113:1
position: 463113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:465540-465680:1:exon

position:465540:1
position: 465540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465680:1
position: 465680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:466111-466195:1:exon

position:466111:1
position: 466111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466195:1
position: 466195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:467112-467344:1:exon

position:467112:1
position: 467112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467344:1
position: 467344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:468775-468907:1:exon

position:468775:1
position: 468775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468907:1
position: 468907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:469886-469988:1:exon

position:469886:1
position: 469886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469988:1
position: 469988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:470292-470433:1:exon

position:470292:1
position: 470292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470433:1
position: 470433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:470570-470657:1:exon

position:470570:1
position: 470570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470657:1
position: 470657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:471147-471359:1:exon

position:471147:1
position: 471147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471359:1
position: 471359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:472305-472471:1:exon

position:472305:1
position: 472305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472471:1
position: 472471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:472590-472691:1:exon

position:472590:1
position: 472590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472691:1
position: 472691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:474573-474681:1:exon

position:474573:1
position: 474573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474681:1
position: 474681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:474789-475654:1:exon

position:474789:1
position: 474789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101749531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101749531
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ras GTPase-activating-like protein IQGAP3
translation: MDGAERPQWERPSAEQMDEQRRQNVAYQYLCRLEEAKRWMEACLGEELPPPTELEENLRNGVLLARLGHRFAPDAVPPARIYDPQQTRYRTSGLHFRHTDNINHWRCAMSRLGLPSIFHPETTDIYDKKNMPRAVYCLHALSLYLFKLGLAPQIQDLSGKVDFTEEEISDAGRELEKLGLQLPAFGRIGGILADELSLDEAAVHAAVLAINVAVERGDVGRTMEALLHPGAMLRGLRTALAAAYQDVLRGAQREKGGGREWVPAEGGDIYTHCLTQAEIQENISRVNVHAALEEVDDAVQRGDALLLHRALQDPALSLPHLQRDNLQLCLEQLRAQRQQKALELGYVELLDEEEVAVGIQVANERGEEERAMLRAVSAINAAIRRGIPAATLQALLEPSAQLPAAFPHAAALYQHQLALLQRQHPRGELLQEELFVAVEMLSAVALVNRAVDAGNPEELWGGLLSPALGLSGVEEENAQRYFDALLQLKEQLRKEGAEFLSWTDIQDSVNATNASVQDETDRLLAVQRINAALRHADPQRTLAALLLPAAALPDVALPNAGRYHRVLSRARAAKAQASGDDGAELWWEEIERGVRAANEETAAVRRMALGTAAINQAIREGRAAQTLRVLRNPDVALRGVVDACAALYQEELQALAATKKPRGSTKPRWVRHRLRDGSEFYLSLQSFEGSWERPCDGELCATHLSREEIQSVITRVTAAHDRQRLWASNMAAVVGLQALLRGFLARRRFVALRRRHTAAVRIQASWRGYRQRKAYLQRLHYLRAHGDAVVKIQAAVRMWRARKRYQERLRYFRRNIGAVVKIQAFVRANKARGDYRMLVHERSPPLGAVRRFIHVLEQNQSDFVEEAEVLRLREEVAKRIRASQQLEGDLSLMDIQIGLLVRNRVTLQEVVSQCRKLTRKNREQLSELMCLDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPTYLARLLFQVPQNKSTAFLQPVVFTLYSYASHPREGYLLLQLFKAALQEEIRCRVERIHDVLTGNAAVIRMVVGFYRSARGRSALRHILGRPVREVLRDATLSIRTDPVDIYKAWVNQAESQSGQRSGLPYEVSPEQALCHPEVRRRLDASVRALLAVTEKFVSAITSSVDQIPYGMRYVAKTLRASLAEKFPEASEEELDKVVGNLLYYRFMNPAVVAPDGFDVVDVSAGAALRPEQRRSLGSIAKVLQHAAARKAFEGENGHLCGANRYLEETHCKFRRFIAAACRVPEPKERFNVDEYSEMVAVAKPVIYITAGELIATHRLLLEHRDSIAPDPGDPLHELLEDLGELPTLQALVGEGAPSPAGGSEPALPQLSSVEISLTLSGKPQPEAGAEQSDGRSLLLSTKQMLVDVIQCQPGGSLAEILRTPASELEEASHHHLMRRRALWDSQTPTKLNRHRSLVANSQLSVEEKKQRIVRNLRRLEVLGLVDAAQHYQGLINELAKDIRNQRRYRQHRREELLKLRQTLRALDAKTLFYEEQIDYYNQYIRSCLHGLAASNKANGKGKKLQPLRYTAARLLEMGVLLEIQDLPASQFRNVIFDIVPCREPGRFQVKAQFMGIDMERFQLHYQDLLQLQYEGVAVMKMFGKAKVNVNLLLFLLNKKFFKK
SIO_010081: LOC101749531
subclass of: SO_0000673
so part of: LOC101749531
location: join(442312..442336,442806..442893,443117..443273,443512..443589,444262..444338,444495..444562,444678..444791,444907..445082,445254..445332,445461..445624,445707..445794,446358..446521,446619..446779,447460..447584,447701..447864,448091..448181,448827..448994,449077..449219,454651..454809,455775..455858,456967..457038,458628..458697,459967..460176,460606..460758,460853..461016,462889..463113,465540..465680,466111..466195,467112..467344,468775..468907,469886..469988,470292..470433,470570..470657,471147..471359,472305..472471,472590..472691,474573..474681,474789..474902)
location: region:442312-474902:1
so has part: feature:442312-442336:1:exon
so has part: feature:442806-442893:1:exon
so has part: feature:443117-443273:1:exon
so has part: feature:443512-443589:1:exon
so has part: feature:444262-444338:1:exon
so has part: feature:444495-444562:1:exon
so has part: feature:444678-444791:1:exon
so has part: feature:444907-445082:1:exon
so has part: feature:445254-445332:1:exon
so has part: feature:445461-445624:1:exon
so has part: feature:445707-445794:1:exon
so has part: feature:446358-446521:1:exon
so has part: feature:446619-446779:1:exon
so has part: feature:447460-447584:1:exon
so has part: feature:447701-447864:1:exon
so has part: feature:448091-448181:1:exon
so has part: feature:448827-448994:1:exon
so has part: feature:449077-449219:1:exon
so has part: feature:454651-454809:1:exon
so has part: feature:455775-455858:1:exon
so has part: feature:456967-457038:1:exon
so has part: feature:458628-458697:1:exon
so has part: feature:459967-460176:1:exon
so has part: feature:460606-460758:1:exon
so has part: feature:460853-461016:1:exon
so has part: feature:462889-463113:1:exon
so has part: feature:465540-465680:1:exon
so has part: feature:466111-466195:1:exon
so has part: feature:467112-467344:1:exon
so has part: feature:468775-468907:1:exon
so has part: feature:469886-469988:1:exon
so has part: feature:470292-470433:1:exon
so has part: feature:470570-470657:1:exon
so has part: feature:471147-471359:1:exon
so has part: feature:472305-472471:1:exon
so has part: feature:472590-472691:1:exon
so has part: feature:474573-474681:1:exon
so has part: feature:474789-474902:1:exon

XP_040508398.1
type: Protein
SIO_000068: ncbiprotein

position:442312:1
position: 442312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474902:1
position: 474902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442312-442336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442806-442893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443117-443273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443512-443589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444262-444338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444495-444562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444678-444791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:444907-445082:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:445254-445332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445461-445624:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445707-445794:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:446358-446521:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446619-446779:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:447460-447584:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:447701-447864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448091-448181:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:448827-448994:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:449077-449219:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:454651-454809:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:455775-455858:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:456967-457038:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458628-458697:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:459967-460176:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:460606-460758:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460853-461016:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:462889-463113:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:465540-465680:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:466111-466195:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:467112-467344:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:468775-468907:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:469886-469988:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:470292-470433:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:470570-470657:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:471147-471359:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:472305-472471:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:472590-472691:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:474573-474681:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:474789-474902:1:exon

ARHGEF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ARHGEF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(481033..516749)
location: region:481033-516749:-1
so has part: feature:481033-516749:-1:exon
subclass of: SO_0000010

112532089
type: Gene
SIO_000068: ncbigene

position:481033:-1
position: 481033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516749:-1
position: 516749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481033-516749:-1:exon

ARHGEF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: ARHGEF2
product: Rho/Rac guanine nucleotide exchange factor 2
experiment: COORDINATES: cap analysis [ECO:0007248]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_040652465.2
SIO_010081: ARHGEF2
subclass of: SO_0000673
so part of: ARHGEF2
location: complement(join(481033..481124,481355..481422,483338..483507,484799..484875,486084..486382,488513..488630,491858..491983,493907..494157,496062..496208,498776..498885,498982..499111,501583..501646,501807..501874,506369..506513,516707..516749))
location: region:481033-516749:-1
so has part: feature:516707-516749:-1:exon
so has part: feature:506369-506513:-1:exon
so has part: feature:501807-501874:-1:exon
so has part: feature:501583-501646:-1:exon
so has part: feature:498982-499111:-1:exon
so has part: feature:498776-498885:-1:exon
so has part: feature:496062-496208:-1:exon
so has part: feature:493907-494157:-1:exon
so has part: feature:491858-491983:-1:exon
so has part: feature:488513-488630:-1:exon
so has part: feature:486084-486382:-1:exon
so has part: feature:484799-484875:-1:exon
so has part: feature:483338-483507:-1:exon
so has part: feature:481355-481422:-1:exon
so has part: feature:481033-481124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516707-516749:-1:exon

position:516707:-1
position: 516707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506369-506513:-1:exon

position:506369:-1
position: 506369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506513:-1
position: 506513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:501807-501874:-1:exon

position:501807:-1
position: 501807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501874:-1
position: 501874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501583-501646:-1:exon

position:501583:-1
position: 501583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501646:-1
position: 501646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:498982-499111:-1:exon

position:498982:-1
position: 498982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499111:-1
position: 499111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:498776-498885:-1:exon

position:498776:-1
position: 498776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498885:-1
position: 498885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:496062-496208:-1:exon

position:496062:-1
position: 496062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496208:-1
position: 496208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:493907-494157:-1:exon

position:493907:-1
position: 493907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494157:-1
position: 494157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:491858-491983:-1:exon

position:491858:-1
position: 491858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491983:-1
position: 491983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:488513-488630:-1:exon

position:488513:-1
position: 488513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488630:-1
position: 488630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:486084-486382:-1:exon

position:486084:-1
position: 486084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486382:-1
position: 486382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:484799-484875:-1:exon

position:484799:-1
position: 484799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484875:-1
position: 484875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:483338-483507:-1:exon

position:483338:-1
position: 483338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483507:-1
position: 483507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:481355-481422:-1:exon

position:481355:-1
position: 481355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481422:-1
position: 481422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:481033-481124:-1:exon

position:481124:-1
position: 481124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ARHGEF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 2
translation: MSRIAARGDRNGKSKERMKEGKEKDARYTNGHLFTTITVSGMTMCFACNKSITAKEALICPTCNVTIHNRCKDTLPNCTKVKQKQQKAALLKNSTALQSVSLRNKGAPRERPNSAVYPSESFRQSLLGPRRGRPSLSLSKSVSTTNIAGTFNEESALGIRRILSQSTDSLNVRNRTVSVESLIEEGPDAVLQQLLAELEADERDFAADSWSLAVDGAFLQLQRADVMRRQDVIYELMQTELHHVRTLKIMGGVLRRAMLEELQLQPGAVNAVFPCVDELSALHQRFLAQLLQRRRLSLVGGSSKNFVIQRLGDLLVSQFSGQSAEQLRKCYAEFCSKHSAALREYKELLARDKRLQAFVRRTARSPLLRRHGVPECILLVTQRITKYPVLIERILRHSREDEAEAAELSRALLLVKDLISAINAEVREHELRMRLYDVYRRVDGRAKLQLRGDGRPGSGNGNGNGAGSGCATFGRDELLRRKLLHSGCVLWXTAAGRFKDVLLLLMTDVIVFLQEKDQKLSFPTMDKPAVISLHELIVRDVANQEKGLFLLSAAPPEMYELHAASRDERTLWMRLIQQAVSQCPSRQDFPLIETEVEASLRKLRERLQQRDPTALGPHCSPSDPMTYDP
SIO_010081: ARHGEF2
subclass of: SO_0000673
so part of: ARHGEF2
location: complement(join(481048..481124,481355..481422,483338..483507,484799..484875,486084..486382,488513..488630,491858..491983,493907..494157,496062..496208,498776..498885,498982..499111,501583..501646,501807..501874,506369..506513,516707..516745))
location: region:481048-516745:-1
so has part: feature:516707-516745:-1:exon
so has part: feature:506369-506513:-1:exon
so has part: feature:501807-501874:-1:exon
so has part: feature:501583-501646:-1:exon
so has part: feature:498982-499111:-1:exon
so has part: feature:498776-498885:-1:exon
so has part: feature:496062-496208:-1:exon
so has part: feature:493907-494157:-1:exon
so has part: feature:491858-491983:-1:exon
so has part: feature:488513-488630:-1:exon
so has part: feature:486084-486382:-1:exon
so has part: feature:484799-484875:-1:exon
so has part: feature:483338-483507:-1:exon
so has part: feature:481355-481422:-1:exon
so has part: feature:481048-481124:-1:exon

XP_040508399.1
type: Protein
SIO_000068: ncbiprotein

position:481048:-1
position: 481048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516745:-1
position: 516745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516707-516745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506369-506513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501807-501874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501583-501646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498982-499111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498776-498885:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:496062-496208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493907-494157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:491858-491983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:488513-488630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:486084-486382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484799-484875:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:483338-483507:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:481355-481422:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:481048-481124:-1:exon

LOC121107551
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121107551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(538369..541725)
location: region:538369-541725:-1
so has part: feature:538369-541725:-1:exon
subclass of: SO_0000010

121107551
type: Gene
SIO_000068: ncbigene

position:538369:-1
position: 538369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541725:-1
position: 541725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538369-541725:-1:exon

LOC121107551
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107551
product: sperm-associated antigen 4 protein-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652473.2
SIO_010081: LOC121107551
subclass of: SO_0000673
so part of: LOC121107551
location: complement(join(538369..538635,538858..538947,539320..539487,539999..540105,540193..540280,540460..540530,540934..541115,541542..541725))
location: region:538369-541725:-1
so has part: feature:541542-541725:-1:exon
so has part: feature:540934-541115:-1:exon
so has part: feature:540460-540530:-1:exon
so has part: feature:540193-540280:-1:exon
so has part: feature:539999-540105:-1:exon
so has part: feature:539320-539487:-1:exon
so has part: feature:538858-538947:-1:exon
so has part: feature:538369-538635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541542-541725:-1:exon

position:541542:-1
position: 541542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:540934-541115:-1:exon

position:540934:-1
position: 540934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541115:-1
position: 541115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540460-540530:-1:exon

position:540460:-1
position: 540460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540530:-1
position: 540530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:540193-540280:-1:exon

position:540193:-1
position: 540193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540280:-1
position: 540280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:539999-540105:-1:exon

position:539999:-1
position: 539999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540105:-1
position: 540105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539320-539487:-1:exon

position:539320:-1
position: 539320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539487:-1
position: 539487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:538858-538947:-1:exon

position:538858:-1
position: 538858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538947:-1
position: 538947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:538369-538635:-1:exon

position:538635:-1
position: 538635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121107551
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107551
product: sperm-associated antigen 4 protein-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652472.2
SIO_010081: LOC121107551
subclass of: SO_0000673
so part of: LOC121107551
location: complement(join(538369..538635,538858..538947,539320..539487,539999..540280,540460..540530,540934..541115,541542..541725))
location: region:538369-541725:-1
so has part: feature:541542-541725:-1:exon
so has part: feature:540934-541115:-1:exon
so has part: feature:540460-540530:-1:exon
so has part: feature:539999-540280:-1:exon
so has part: feature:539320-539487:-1:exon
so has part: feature:538858-538947:-1:exon
so has part: feature:538369-538635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541542-541725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540934-541115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540460-540530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:539999-540280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:539320-539487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538858-538947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538369-538635:-1:exon

LOC121107551
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X2
translation: MARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAAAGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC121107551
subclass of: SO_0000673
so part of: LOC121107551
location: complement(join(538486..538635,538858..538947,539320..539487,539999..540105,540193..540280,540460..540530,540934..541115,541542..541663))
location: region:538486-541663:-1
so has part: feature:541542-541663:-1:exon
so has part: feature:540934-541115:-1:exon
so has part: feature:540460-540530:-1:exon
so has part: feature:540193-540280:-1:exon
so has part: feature:539999-540105:-1:exon
so has part: feature:539320-539487:-1:exon
so has part: feature:538858-538947:-1:exon
so has part: feature:538486-538635:-1:exon

XP_040508407.1
type: Protein
SIO_000068: ncbiprotein

position:538486:-1
position: 538486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541663:-1
position: 541663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541542-541663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540934-541115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540460-540530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:540193-540280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:539999-540105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539320-539487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538858-538947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:538486-538635:-1:exon

LOC121107551
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X1
translation: MARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAAAGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC121107551
subclass of: SO_0000673
so part of: LOC121107551
location: complement(join(538486..538635,538858..538947,539320..539487,539999..540280,540460..540530,540934..541115,541542..541663))
location: region:538486-541663:-1
so has part: feature:541542-541663:-1:exon
so has part: feature:540934-541115:-1:exon
so has part: feature:540460-540530:-1:exon
so has part: feature:539999-540280:-1:exon
so has part: feature:539320-539487:-1:exon
so has part: feature:538858-538947:-1:exon
so has part: feature:538486-538635:-1:exon

XP_040508406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541542-541663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540934-541115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540460-540530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:539999-540280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:539320-539487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538858-538947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:538486-538635:-1:exon

LOC101747704
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101747704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(549328..583342)
location: region:549328-583342:-1
so has part: feature:549328-583342:-1:exon
subclass of: SO_0000010

101747704
type: Gene
SIO_000068: ncbigene

position:549328:-1
position: 549328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583342:-1
position: 583342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549328-583342:-1:exon

LOC101747704
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: LOC101747704
product: uncharacterized LOC101747704, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005841806.1
SIO_010081: LOC101747704
so part of: LOC101747704
location: complement(join(549328..549635,549819..550197,550323..550543,550766..550855,551228..551395,551912..552193,552373..552443,552849..553030,553458..553664,553791..553841,563716..564340))
location: region:549328-564340:-1
so has part: feature:563716-564340:-1:exon
so has part: feature:553791-553841:-1:exon
so has part: feature:553458-553664:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:551912-552193:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550323-550543:-1:exon
so has part: feature:549819-550197:-1:exon
so has part: feature:549328-549635:-1:exon

position:564340:-1
position: 564340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563716-564340:-1:exon

position:563716:-1
position: 563716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553791-553841:-1:exon

position:553791:-1
position: 553791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553841:-1
position: 553841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553458-553664:-1:exon

position:553458:-1
position: 553458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553664:-1
position: 553664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552849-553030:-1:exon

position:552849:-1
position: 552849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553030:-1
position: 553030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552373-552443:-1:exon

position:552373:-1
position: 552373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552443:-1
position: 552443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551912-552193:-1:exon

position:551912:-1
position: 551912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552193:-1
position: 552193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:551228-551395:-1:exon

position:551228:-1
position: 551228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551395:-1
position: 551395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:550766-550855:-1:exon

position:550766:-1
position: 550766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550855:-1
position: 550855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:550323-550543:-1:exon

position:550323:-1
position: 550323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550543:-1
position: 550543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:549819-550197:-1:exon

position:549819:-1
position: 549819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550197:-1
position: 550197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:549328-549635:-1:exon

position:549635:-1
position: 549635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101747704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101747704
product: uncharacterized LOC101747704, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903956.1
SIO_010081: LOC101747704
subclass of: SO_0000673
so part of: LOC101747704
location: complement(join(550277..550543,550766..550855,551228..551395,551912..552193,552373..552443,552849..553030,553458..553664,553791..553959,582652..583342))
location: region:550277-583342:-1
so has part: feature:582652-583342:-1:exon
so has part: feature:553791-553959:-1:exon
so has part: feature:553458-553664:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:551912-552193:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550277-550543:-1:exon

position:550277:-1
position: 550277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582652-583342:-1:exon

position:582652:-1
position: 582652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553791-553959:-1:exon

position:553959:-1
position: 553959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553458-553664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552849-553030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552373-552443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551912-552193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551228-551395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550766-550855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550277-550543:-1:exon

LOC101747704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101747704
product: uncharacterized LOC101747704, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025143572.3
SIO_010081: LOC101747704
subclass of: SO_0000673
so part of: LOC101747704
location: complement(join(550277..550543,550766..550855,551228..551395,551912..552193,552373..552443,552849..553030,553458..553683,553791..553959,582652..583342))
location: region:550277-583342:-1
so has part: feature:582652-583342:-1:exon
so has part: feature:553791-553959:-1:exon
so has part: feature:553458-553683:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:551912-552193:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550277-550543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582652-583342:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553791-553959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553458-553683:-1:exon

position:553683:-1
position: 553683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552849-553030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552373-552443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551912-552193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551228-551395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550766-550855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550277-550543:-1:exon

LOC101747704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101747704
product: uncharacterized LOC101747704, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040652470.1
SIO_010081: LOC101747704
subclass of: SO_0000673
so part of: LOC101747704
location: complement(join(550277..550543,550766..550855,551228..551395,551912..552193,552373..552443,552849..553030,553458..553664,553791..553841,563716..564340))
location: region:550277-564340:-1
so has part: feature:563716-564340:-1:exon
so has part: feature:553791-553841:-1:exon
so has part: feature:553458-553664:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:551912-552193:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550277-550543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:563716-564340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553791-553841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553458-553664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552849-553030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552373-552443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551912-552193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551228-551395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550766-550855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550277-550543:-1:exon

LOC101747704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101747704
product: uncharacterized LOC101747704, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040652471.2
SIO_010081: LOC101747704
subclass of: SO_0000673
so part of: LOC101747704
location: complement(join(550277..550543,550766..550855,551228..551395,551912..552018,552106..552193,552373..552443,552849..553030,553458..553664,553791..553841,563716..564337))
location: region:550277-564337:-1
so has part: feature:563716-564337:-1:exon
so has part: feature:553791-553841:-1:exon
so has part: feature:553458-553664:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:552106-552193:-1:exon
so has part: feature:551912-552018:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550277-550543:-1:exon

position:564337:-1
position: 564337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563716-564337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553791-553841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553458-553664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552849-553030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552373-552443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552106-552193:-1:exon

position:552106:-1
position: 552106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:551912-552018:-1:exon

position:552018:-1
position: 552018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:551228-551395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550766-550855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:550277-550543:-1:exon

LOC101747704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101747704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101747704 isoform X2
translation: MGDLVGNPGTDPPRSLAGGKRERVSCGQEVGSERGWSLENVWELPQQFLSVGRPSSRRCQPVPNPSITSLNVQLWPTVSEHHGGAGRPFPPTVLRFCVLMKKSLCASKGDLRLKRGRPSSQVQHDESIPLSRVSAKMQRRPLSVPLVAFLLQRRMMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARAKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC101747704
subclass of: SO_0000673
so part of: LOC101747704
location: complement(join(550394..550543,550766..550855,551228..551395,551912..552018,552106..552193,552373..552443,552849..553030,553458..553664,553791..553841,563716..564173))
location: region:550394-564173:-1
so has part: feature:563716-564173:-1:exon
so has part: feature:553791-553841:-1:exon
so has part: feature:553458-553664:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:552106-552193:-1:exon
so has part: feature:551912-552018:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550394-550543:-1:exon

XP_040508405.1
type: Protein
SIO_000068: ncbiprotein

position:550394:-1
position: 550394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564173:-1
position: 564173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563716-564173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553791-553841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553458-553664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552849-553030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552373-552443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552106-552193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551912-552018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551228-551395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550766-550855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:550394-550543:-1:exon

LOC101747704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101747704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101747704 isoform X1
translation: MGDLVGNPGTDPPRSLAGGKRERVSCGQEVGSERGWSLENVWELPQQFLSVGRPSSRRCQPVPNPSITSLNVQLWPTVSEHHGGAGRPFPPTVLRFCVLMKKSLCASKGDLRLKRGRPSSQVQHDESIPLSRVSAKMQRRPLSVPLVAFLLQRRMMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARAKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC101747704
subclass of: SO_0000673
so part of: LOC101747704
location: complement(join(550394..550543,550766..550855,551228..551395,551912..552193,552373..552443,552849..553030,553458..553664,553791..553841,563716..564173))
location: region:550394-564173:-1
so has part: feature:563716-564173:-1:exon
so has part: feature:553791-553841:-1:exon
so has part: feature:553458-553664:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:551912-552193:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550394-550543:-1:exon

XP_040508404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563716-564173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553791-553841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553458-553664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552849-553030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552373-552443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551912-552193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551228-551395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550766-550855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550394-550543:-1:exon

LOC101747704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101747704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X3
translation: MMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARAKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC101747704
subclass of: SO_0000673
so part of: LOC101747704
location: complement(join(550394..550543,550766..550855,551228..551395,551912..552193,552373..552443,552849..553030,553458..553664,553791..553837))
location: region:550394-553837:-1
so has part: feature:553791-553837:-1:exon
so has part: feature:553458-553664:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:551912-552193:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550394-550543:-1:exon

XP_046759912.1
type: Protein
SIO_000068: ncbiprotein

position:553837:-1
position: 553837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553791-553837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553458-553664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552849-553030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552373-552443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551912-552193:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551228-551395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550766-550855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550394-550543:-1:exon

LOC101747704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101747704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X4
translation: MARAKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC101747704
subclass of: SO_0000673
so part of: LOC101747704
location: complement(join(550394..550543,550766..550855,551228..551395,551912..552193,552373..552443,552849..553030,553458..553579))
location: region:550394-553579:-1
so has part: feature:553458-553579:-1:exon
so has part: feature:552849-553030:-1:exon
so has part: feature:552373-552443:-1:exon
so has part: feature:551912-552193:-1:exon
so has part: feature:551228-551395:-1:exon
so has part: feature:550766-550855:-1:exon
so has part: feature:550394-550543:-1:exon

XP_024999340.2
type: Protein
SIO_000068: ncbiprotein

position:553579:-1
position: 553579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553458-553579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552849-553030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552373-552443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551912-552193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551228-551395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550766-550855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550394-550543:-1:exon

LOC121107552
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121107552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(557712..560495)
location: region:557712-560495:-1
so has part: feature:557712-560495:-1:exon
subclass of: SO_0000011

121107552
type: Gene
SIO_000068: ncbigene

position:557712:-1
position: 557712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560495:-1
position: 560495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557712-560495:-1:exon

LOC121107552
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9031
nc RNA class: lncRNA
gene: LOC121107552
product: uncharacterized LOC121107552
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_005841807.1
SIO_010081: LOC121107552
subclass of: SO_0000673
so part of: LOC121107552
location: complement(join(557712..560071,560254..560495))
location: region:557712-560495:-1
so has part: feature:560254-560495:-1:exon
so has part: feature:557712-560071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560254-560495:-1:exon

position:560254:-1
position: 560254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557712-560071:-1:exon

position:560071:-1
position: 560071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107057474
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107057474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(576427..585349)
location: region:576427-585349:-1
so has part: feature:576427-585349:-1:exon
subclass of: SO_0000010

107057474
type: Gene
SIO_000068: ncbigene

position:576427:-1
position: 576427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585349:-1
position: 585349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576427-585349:-1:exon

LOC107057474
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: LOC107057474
product: sperm-associated antigen 4 protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005841805.1
SIO_010081: LOC107057474
so part of: LOC107057474
location: complement(join(576427..576567,576693..576913,577133..577222,577595..577762,578274..578555,578735..578805,579211..579392,579820..580026,580153..580203,584152..585349))
location: region:576427-585349:-1
so has part: feature:584152-585349:-1:exon
so has part: feature:580153-580203:-1:exon
so has part: feature:579820-580026:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578274-578555:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576693-576913:-1:exon
so has part: feature:576427-576567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584152-585349:-1:exon

position:584152:-1
position: 584152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580153-580203:-1:exon

position:580153:-1
position: 580153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580203:-1
position: 580203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579820-580026:-1:exon

position:579820:-1
position: 579820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580026:-1
position: 580026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579211-579392:-1:exon

position:579211:-1
position: 579211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579392:-1
position: 579392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:578735-578805:-1:exon

position:578735:-1
position: 578735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578805:-1
position: 578805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:578274-578555:-1:exon

position:578274:-1
position: 578274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578555:-1
position: 578555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:577595-577762:-1:exon

position:577595:-1
position: 577595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577762:-1
position: 577762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:577133-577222:-1:exon

position:577133:-1
position: 577133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577222:-1
position: 577222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:576693-576913:-1:exon

position:576693:-1
position: 576693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576913:-1
position: 576913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:576427-576567:-1:exon

position:576567:-1
position: 576567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107057474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107057474
product: sperm-associated antigen 4 protein-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040652468.1
SIO_010081: LOC107057474
subclass of: SO_0000673
so part of: LOC107057474
location: complement(join(576647..576913,577133..577222,577595..577762,578274..578555,578735..578805,579211..579392,579820..580026,580153..580235,584637..585349))
location: region:576647-585349:-1
so has part: feature:584637-585349:-1:exon
so has part: feature:580153-580235:-1:exon
so has part: feature:579820-580026:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578274-578555:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576647-576913:-1:exon

position:576647:-1
position: 576647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584637-585349:-1:exon

position:584637:-1
position: 584637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580153-580235:-1:exon

position:580235:-1
position: 580235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579820-580026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579211-579392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578735-578805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578274-578555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577595-577762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577133-577222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576647-576913:-1:exon

LOC107057474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107057474
product: sperm-associated antigen 4 protein-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040652466.1
SIO_010081: LOC107057474
subclass of: SO_0000673
so part of: LOC107057474
location: complement(join(576647..576913,577133..577222,577595..577762,578274..578555,578735..578805,579211..579392,579820..580026,580153..580203,584152..585349))
location: region:576647-585349:-1
so has part: feature:584152-585349:-1:exon
so has part: feature:580153-580203:-1:exon
so has part: feature:579820-580026:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578274-578555:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576647-576913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584152-585349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580153-580203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579820-580026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579211-579392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578735-578805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578274-578555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577595-577762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577133-577222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576647-576913:-1:exon

LOC107057474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107057474
product: sperm-associated antigen 4 protein-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_040652467.2
SIO_010081: LOC107057474
subclass of: SO_0000673
so part of: LOC107057474
location: complement(join(576647..576913,577133..577222,577595..577762,578274..578380,578468..578555,578735..578805,579211..579392,579820..580026,580153..580203,584152..585344))
location: region:576647-585344:-1
so has part: feature:584152-585344:-1:exon
so has part: feature:580153-580203:-1:exon
so has part: feature:579820-580026:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578468-578555:-1:exon
so has part: feature:578274-578380:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576647-576913:-1:exon

position:585344:-1
position: 585344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584152-585344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580153-580203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579820-580026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579211-579392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578735-578805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578468-578555:-1:exon

position:578468:-1
position: 578468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:578274-578380:-1:exon

position:578380:-1
position: 578380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:577595-577762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577133-577222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576647-576913:-1:exon

LOC107057474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107057474
product: sperm-associated antigen 4 protein-like, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652469.2
SIO_010081: LOC107057474
subclass of: SO_0000673
so part of: LOC107057474
location: complement(join(576647..576913,577133..577222,577595..577762,578274..578555,578735..578805,579211..579392,579820..580045,580153..581053))
location: region:576647-581053:-1
so has part: feature:580153-581053:-1:exon
so has part: feature:579820-580045:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578274-578555:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576647-576913:-1:exon

position:581053:-1
position: 581053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580153-581053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579820-580045:-1:exon

position:580045:-1
position: 580045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579211-579392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578735-578805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578274-578555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577595-577762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577133-577222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576647-576913:-1:exon

LOC107057474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107057474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107057474 isoform X2
translation: MGDLVGNPGTDPPRSLAGGKRERVSCGQEVGSERGWSLENVWELPQQFLSVGRPSSRRCQPVPNPSITSLNVQLWPTVSEHHGGAGRPFPPTVLRFCVLMKKSLCASKGDLRLKRGRPSSQVQHDESIPLSRVSAKMQRRPLSVPLVAFLLQRRMMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARAKARHARSPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLMALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAAAGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC107057474
subclass of: SO_0000673
so part of: LOC107057474
location: complement(join(576764..576913,577133..577222,577595..577762,578274..578380,578468..578555,578735..578805,579211..579392,579820..580026,580153..580203,584152..584609))
location: region:576764-584609:-1
so has part: feature:584152-584609:-1:exon
so has part: feature:580153-580203:-1:exon
so has part: feature:579820-580026:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578468-578555:-1:exon
so has part: feature:578274-578380:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576764-576913:-1:exon

XP_040508401.1
type: Protein
SIO_000068: ncbiprotein

position:576764:-1
position: 576764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584609:-1
position: 584609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584152-584609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580153-580203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579820-580026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579211-579392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578735-578805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578468-578555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578274-578380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577595-577762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577133-577222:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576764-576913:-1:exon

LOC107057474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107057474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107057474 isoform X1
translation: MGDLVGNPGTDPPRSLAGGKRERVSCGQEVGSERGWSLENVWELPQQFLSVGRPSSRRCQPVPNPSITSLNVQLWPTVSEHHGGAGRPFPPTVLRFCVLMKKSLCASKGDLRLKRGRPSSQVQHDESIPLSRVSAKMQRRPLSVPLVAFLLQRRMMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARAKARHARSPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLMALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAAAGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC107057474
subclass of: SO_0000673
so part of: LOC107057474
location: complement(join(576764..576913,577133..577222,577595..577762,578274..578555,578735..578805,579211..579392,579820..580026,580153..580203,584152..584609))
location: region:576764-584609:-1
so has part: feature:584152-584609:-1:exon
so has part: feature:580153-580203:-1:exon
so has part: feature:579820-580026:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578274-578555:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576764-576913:-1:exon

XP_040508400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584152-584609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580153-580203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579820-580026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579211-579392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578735-578805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578274-578555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577595-577762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577133-577222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576764-576913:-1:exon

LOC107057474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107057474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X3
translation: MMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARAKARHARSPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLMALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAAAGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC107057474
subclass of: SO_0000673
so part of: LOC107057474
location: complement(join(576764..576913,577133..577222,577595..577762,578274..578555,578735..578805,579211..579392,579820..580026,580153..580199))
location: region:576764-580199:-1
so has part: feature:580153-580199:-1:exon
so has part: feature:579820-580026:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578274-578555:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576764-576913:-1:exon

XP_040508402.1
type: Protein
SIO_000068: ncbiprotein

position:580199:-1
position: 580199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580153-580199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579820-580026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579211-579392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578735-578805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578274-578555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577595-577762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577133-577222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576764-576913:-1:exon

LOC107057474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107057474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X4
translation: MARAKARHARSPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLMALWMAFSVQALASAGQLCRTWRDKATGMAGKLAAAAAGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC107057474
subclass of: SO_0000673
so part of: LOC107057474
location: complement(join(576764..576913,577133..577222,577595..577762,578274..578555,578735..578805,579211..579392,579820..579941))
location: region:576764-579941:-1
so has part: feature:579820-579941:-1:exon
so has part: feature:579211-579392:-1:exon
so has part: feature:578735-578805:-1:exon
so has part: feature:578274-578555:-1:exon
so has part: feature:577595-577762:-1:exon
so has part: feature:577133-577222:-1:exon
so has part: feature:576764-576913:-1:exon

XP_040508403.1
type: Protein
SIO_000068: ncbiprotein

position:579941:-1
position: 579941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579820-579941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579211-579392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578735-578805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578274-578555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577595-577762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577133-577222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576764-576913:-1:exon

LOC107057457
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107057457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(590435..594011)
location: region:590435-594011:-1
so has part: feature:590435-594011:-1:exon
subclass of: SO_0000010

107057457
type: Gene
SIO_000068: ncbigene

position:590435:-1
position: 590435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594011:-1
position: 594011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590435-594011:-1:exon

LOC107057457
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: LOC107057457
product: sperm-associated antigen 4 protein-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_006932115.1
SIO_010081: LOC107057457
so part of: LOC107057457
location: complement(join(590435..590575,590701..590921,591144..591233,591606..591773,592285..592391,592479..592566,592746..592816,593220..593401,593828..594011))
location: region:590435-594011:-1
so has part: feature:593828-594011:-1:exon
so has part: feature:593220-593401:-1:exon
so has part: feature:592746-592816:-1:exon
so has part: feature:592479-592566:-1:exon
so has part: feature:592285-592391:-1:exon
so has part: feature:591606-591773:-1:exon
so has part: feature:591144-591233:-1:exon
so has part: feature:590701-590921:-1:exon
so has part: feature:590435-590575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593828-594011:-1:exon

position:593828:-1
position: 593828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:593220-593401:-1:exon

position:593220:-1
position: 593220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593401:-1
position: 593401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592746-592816:-1:exon

position:592746:-1
position: 592746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592816:-1
position: 592816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:592479-592566:-1:exon

position:592479:-1
position: 592479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592566:-1
position: 592566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592285-592391:-1:exon

position:592285:-1
position: 592285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592391:-1
position: 592391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:591606-591773:-1:exon

position:591606:-1
position: 591606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591773:-1
position: 591773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:591144-591233:-1:exon

position:591144:-1
position: 591144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591233:-1
position: 591233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:590701-590921:-1:exon

position:590701:-1
position: 590701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590921:-1
position: 590921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:590435-590575:-1:exon

position:590575:-1
position: 590575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107057457
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107057457
product: sperm-associated antigen 4 protein-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025143576.3
SIO_010081: LOC107057457
subclass of: SO_0000673
so part of: LOC107057457
location: complement(join(590655..590921,591144..591233,591606..591773,592285..592391,592479..592566,592746..592816,593220..593401,593828..594011))
location: region:590655-594011:-1
so has part: feature:593828-594011:-1:exon
so has part: feature:593220-593401:-1:exon
so has part: feature:592746-592816:-1:exon
so has part: feature:592479-592566:-1:exon
so has part: feature:592285-592391:-1:exon
so has part: feature:591606-591773:-1:exon
so has part: feature:591144-591233:-1:exon
so has part: feature:590655-590921:-1:exon

position:590655:-1
position: 590655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593828-594011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593220-593401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592746-592816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592479-592566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592285-592391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591606-591773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591144-591233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590655-590921:-1:exon

LOC107057457
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107057457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like
translation: MARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMARKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQRDCYQTPDWALQSFGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC107057457
subclass of: SO_0000673
so part of: LOC107057457
location: complement(join(590772..590921,591144..591233,591606..591773,592285..592391,592479..592566,592746..592816,593220..593401,593828..593949))
location: region:590772-593949:-1
so has part: feature:593828-593949:-1:exon
so has part: feature:593220-593401:-1:exon
so has part: feature:592746-592816:-1:exon
so has part: feature:592479-592566:-1:exon
so has part: feature:592285-592391:-1:exon
so has part: feature:591606-591773:-1:exon
so has part: feature:591144-591233:-1:exon
so has part: feature:590772-590921:-1:exon

XP_024999344.2
type: Protein
SIO_000068: ncbiprotein

position:590772:-1
position: 590772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593949:-1
position: 593949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593828-593949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593220-593401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592746-592816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592479-592566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592285-592391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591606-591773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591144-591233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590772-590921:-1:exon

LOC121107553
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121107553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(599114..615839)
location: region:599114-615839:-1
so has part: feature:599114-615839:-1:exon
subclass of: SO_0000010

121107553
type: Gene
SIO_000068: ncbigene

position:599114:-1
position: 599114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615839:-1
position: 615839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599114-615839:-1:exon

LOC121107553
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_005841808.2
SIO_010081: LOC121107553
so part of: LOC121107553
location: complement(join(599114..600010,600136..600356,600579..600668,601041..601208,601720..602001,602181..602251,602655..602836,603263..603469,603596..604686,610604..610702))
location: region:599114-610702:-1
so has part: feature:610604-610702:-1:exon
so has part: feature:603596-604686:-1:exon
so has part: feature:603263-603469:-1:exon
so has part: feature:602655-602836:-1:exon
so has part: feature:602181-602251:-1:exon
so has part: feature:601720-602001:-1:exon
so has part: feature:601041-601208:-1:exon
so has part: feature:600579-600668:-1:exon
so has part: feature:600136-600356:-1:exon
so has part: feature:599114-600010:-1:exon

position:610702:-1
position: 610702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610604-610702:-1:exon

position:610604:-1
position: 610604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603596-604686:-1:exon

position:603596:-1
position: 603596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604686:-1
position: 604686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603263-603469:-1:exon

position:603263:-1
position: 603263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603469:-1
position: 603469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602655-602836:-1:exon

position:602655:-1
position: 602655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602836:-1
position: 602836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:602181-602251:-1:exon

position:602181:-1
position: 602181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602251:-1
position: 602251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:601720-602001:-1:exon

position:601720:-1
position: 601720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602001:-1
position: 602001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:601041-601208:-1:exon

position:601041:-1
position: 601041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601208:-1
position: 601208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600579-600668:-1:exon

position:600579:-1
position: 600579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600668:-1
position: 600668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:600136-600356:-1:exon

position:600136:-1
position: 600136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600356:-1
position: 600356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:599114-600010:-1:exon

position:600010:-1
position: 600010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121107553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652475.2
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(600090..600356,600579..600668,601041..601208,601720..601826,601914..602001,602181..602251,602655..602836,603263..603469,603596..604686,610604..610702))
location: region:600090-610702:-1
so has part: feature:610604-610702:-1:exon
so has part: feature:603596-604686:-1:exon
so has part: feature:603263-603469:-1:exon
so has part: feature:602655-602836:-1:exon
so has part: feature:602181-602251:-1:exon
so has part: feature:601914-602001:-1:exon
so has part: feature:601720-601826:-1:exon
so has part: feature:601041-601208:-1:exon
so has part: feature:600579-600668:-1:exon
so has part: feature:600090-600356:-1:exon

position:600090:-1
position: 600090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610604-610702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603596-604686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603263-603469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602655-602836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602181-602251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601914-602001:-1:exon

position:601914:-1
position: 601914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:601720-601826:-1:exon

position:601826:-1
position: 601826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:601041-601208:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:600579-600668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:600090-600356:-1:exon

LOC121107553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652474.2
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(600090..600356,600579..600668,601041..601208,601720..602001,602181..602251,602655..602836,603263..603469,603596..604686,610604..610702))
location: region:600090-610702:-1
so has part: feature:610604-610702:-1:exon
so has part: feature:603596-604686:-1:exon
so has part: feature:603263-603469:-1:exon
so has part: feature:602655-602836:-1:exon
so has part: feature:602181-602251:-1:exon
so has part: feature:601720-602001:-1:exon
so has part: feature:601041-601208:-1:exon
so has part: feature:600579-600668:-1:exon
so has part: feature:600090-600356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610604-610702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603596-604686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603263-603469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602655-602836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602181-602251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601720-602001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:601041-601208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600579-600668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:600090-600356:-1:exon

LOC121107553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X8
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025143597.3
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(600090..600356,600579..600668,601041..601208,601720..602001,602181..602251,602655..602836,603263..603488,603596..604686,610604..610702))
location: region:600090-610702:-1
so has part: feature:610604-610702:-1:exon
so has part: feature:603596-604686:-1:exon
so has part: feature:603263-603488:-1:exon
so has part: feature:602655-602836:-1:exon
so has part: feature:602181-602251:-1:exon
so has part: feature:601720-602001:-1:exon
so has part: feature:601041-601208:-1:exon
so has part: feature:600579-600668:-1:exon
so has part: feature:600090-600356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610604-610702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603596-604686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603263-603488:-1:exon

position:603488:-1
position: 603488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602655-602836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602181-602251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601720-602001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:601041-601208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600579-600668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:600090-600356:-1:exon

LOC121107553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X3
translation: MMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMARKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(600207..600356,600579..600668,601041..601208,601720..601826,601914..602001,602181..602251,602655..602836,603263..603469,603596..603642))
location: region:600207-603642:-1
so has part: feature:603596-603642:-1:exon
so has part: feature:603263-603469:-1:exon
so has part: feature:602655-602836:-1:exon
so has part: feature:602181-602251:-1:exon
so has part: feature:601914-602001:-1:exon
so has part: feature:601720-601826:-1:exon
so has part: feature:601041-601208:-1:exon
so has part: feature:600579-600668:-1:exon
so has part: feature:600207-600356:-1:exon

XP_040508409.1
type: Protein
SIO_000068: ncbiprotein

position:600207:-1
position: 600207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603642:-1
position: 603642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603596-603642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603263-603469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602655-602836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602181-602251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601914-602001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601720-601826:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:601041-601208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600579-600668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:600207-600356:-1:exon

LOC121107553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X1
translation: MMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMARKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(600207..600356,600579..600668,601041..601208,601720..602001,602181..602251,602655..602836,603263..603469,603596..603642))
location: region:600207-603642:-1
so has part: feature:603596-603642:-1:exon
so has part: feature:603263-603469:-1:exon
so has part: feature:602655-602836:-1:exon
so has part: feature:602181-602251:-1:exon
so has part: feature:601720-602001:-1:exon
so has part: feature:601041-601208:-1:exon
so has part: feature:600579-600668:-1:exon
so has part: feature:600207-600356:-1:exon

XP_040508408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603596-603642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603263-603469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602655-602836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602181-602251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601720-602001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601041-601208:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600579-600668:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600207-600356:-1:exon

LOC121107553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X5
translation: MARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMARKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(600207..600356,600579..600668,601041..601208,601720..602001,602181..602251,602655..602836,603263..603384))
location: region:600207-603384:-1
so has part: feature:603263-603384:-1:exon
so has part: feature:602655-602836:-1:exon
so has part: feature:602181-602251:-1:exon
so has part: feature:601720-602001:-1:exon
so has part: feature:601041-601208:-1:exon
so has part: feature:600579-600668:-1:exon
so has part: feature:600207-600356:-1:exon

XP_024999365.2
type: Protein
SIO_000068: ncbiprotein

position:603384:-1
position: 603384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603263-603384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602655-602836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602181-602251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601720-602001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601041-601208:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600579-600668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600207-600356:-1:exon

LOC121107553
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_005841809.2
SIO_010081: LOC121107553
so part of: LOC121107553
location: complement(join(607740..608700,608826..609046,609269..609358,609731..609898,610410..610691,610871..610941,611345..611526,611953..612159,612286..615839))
location: region:607740-615839:-1
so has part: feature:612286-615839:-1:exon
so has part: feature:611953-612159:-1:exon
so has part: feature:611345-611526:-1:exon
so has part: feature:610871-610941:-1:exon
so has part: feature:610410-610691:-1:exon
so has part: feature:609731-609898:-1:exon
so has part: feature:609269-609358:-1:exon
so has part: feature:608826-609046:-1:exon
so has part: feature:607740-608700:-1:exon

position:607740:-1
position: 607740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612286-615839:-1:exon

position:612286:-1
position: 612286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:611953-612159:-1:exon

position:611953:-1
position: 611953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612159:-1
position: 612159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611345-611526:-1:exon

position:611345:-1
position: 611345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611526:-1
position: 611526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:610871-610941:-1:exon

position:610871:-1
position: 610871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610941:-1
position: 610941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:610410-610691:-1:exon

position:610410:-1
position: 610410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610691:-1
position: 610691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:609731-609898:-1:exon

position:609731:-1
position: 609731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609898:-1
position: 609898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:609269-609358:-1:exon

position:609269:-1
position: 609269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609358:-1
position: 609358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:608826-609046:-1:exon

position:608826:-1
position: 608826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609046:-1
position: 609046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:607740-608700:-1:exon

position:608700:-1
position: 608700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121107553
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_006932114.1
SIO_010081: LOC121107553
so part of: LOC121107553
location: complement(join(607743..608139,608322..608700,608826..609046,609269..609358,609731..609898,610410..610691,610871..610941,611345..611526,611953..612159,612286..615839))
location: region:607743-615839:-1
so has part: feature:612286-615839:-1:exon
so has part: feature:611953-612159:-1:exon
so has part: feature:611345-611526:-1:exon
so has part: feature:610871-610941:-1:exon
so has part: feature:610410-610691:-1:exon
so has part: feature:609731-609898:-1:exon
so has part: feature:609269-609358:-1:exon
so has part: feature:608826-609046:-1:exon
so has part: feature:608322-608700:-1:exon
so has part: feature:607743-608139:-1:exon

position:607743:-1
position: 607743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612286-615839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611953-612159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611345-611526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610871-610941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610410-610691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609731-609898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609269-609358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608826-609046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608322-608700:-1:exon

position:608322:-1
position: 608322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:607743-608139:-1:exon

position:608139:-1
position: 608139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121107553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X7
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652477.2
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(608780..609046,609269..609358,609731..609898,610410..610516,610604..610691,610871..610941,611345..611526,611953..612159,612286..615839))
location: region:608780-615839:-1
so has part: feature:612286-615839:-1:exon
so has part: feature:611953-612159:-1:exon
so has part: feature:611345-611526:-1:exon
so has part: feature:610871-610941:-1:exon
so has part: feature:610604-610691:-1:exon
so has part: feature:610410-610516:-1:exon
so has part: feature:609731-609898:-1:exon
so has part: feature:609269-609358:-1:exon
so has part: feature:608780-609046:-1:exon

position:608780:-1
position: 608780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612286-615839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611953-612159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611345-611526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610871-610941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610604-610691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610410-610516:-1:exon

position:610516:-1
position: 610516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:609731-609898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609269-609358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608780-609046:-1:exon

LOC121107553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652476.2
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(608780..609046,609269..609358,609731..609898,610410..610691,610871..610941,611345..611526,611953..612159,612286..615839))
location: region:608780-615839:-1
so has part: feature:612286-615839:-1:exon
so has part: feature:611953-612159:-1:exon
so has part: feature:611345-611526:-1:exon
so has part: feature:610871-610941:-1:exon
so has part: feature:610410-610691:-1:exon
so has part: feature:609731-609898:-1:exon
so has part: feature:609269-609358:-1:exon
so has part: feature:608780-609046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:612286-615839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611953-612159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611345-611526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610871-610941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610410-610691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609731-609898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609269-609358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608780-609046:-1:exon

LOC121107553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107553
product: sperm-associated antigen 4 protein-like, transcript variant X9
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652478.2
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(608780..609046,609269..609358,609731..609898,610410..610691,610871..610941,611345..611526,611953..612178,612286..615839))
location: region:608780-615839:-1
so has part: feature:612286-615839:-1:exon
so has part: feature:611953-612178:-1:exon
so has part: feature:611345-611526:-1:exon
so has part: feature:610871-610941:-1:exon
so has part: feature:610410-610691:-1:exon
so has part: feature:609731-609898:-1:exon
so has part: feature:609269-609358:-1:exon
so has part: feature:608780-609046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:612286-615839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611953-612178:-1:exon

position:612178:-1
position: 612178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611345-611526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610871-610941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610410-610691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609731-609898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609269-609358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608780-609046:-1:exon

LOC121107553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X4
translation: MMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMARKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(608897..609046,609269..609358,609731..609898,610410..610516,610604..610691,610871..610941,611345..611526,611953..612159,612286..612332))
location: region:608897-612332:-1
so has part: feature:612286-612332:-1:exon
so has part: feature:611953-612159:-1:exon
so has part: feature:611345-611526:-1:exon
so has part: feature:610871-610941:-1:exon
so has part: feature:610604-610691:-1:exon
so has part: feature:610410-610516:-1:exon
so has part: feature:609731-609898:-1:exon
so has part: feature:609269-609358:-1:exon
so has part: feature:608897-609046:-1:exon

XP_040508411.1
type: Protein
SIO_000068: ncbiprotein

position:608897:-1
position: 608897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612332:-1
position: 612332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612286-612332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611953-612159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611345-611526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610871-610941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610604-610691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610410-610516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609731-609898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609269-609358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608897-609046:-1:exon

LOC121107553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X2
translation: MMSGESVFWRRRQTEDVAEPQWAQSFWDGSAERTCCFQRSSVANMARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMARKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(608897..609046,609269..609358,609731..609898,610410..610691,610871..610941,611345..611526,611953..612159,612286..612332))
location: region:608897-612332:-1
so has part: feature:612286-612332:-1:exon
so has part: feature:611953-612159:-1:exon
so has part: feature:611345-611526:-1:exon
so has part: feature:610871-610941:-1:exon
so has part: feature:610410-610691:-1:exon
so has part: feature:609731-609898:-1:exon
so has part: feature:609269-609358:-1:exon
so has part: feature:608897-609046:-1:exon

XP_040508410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:612286-612332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611953-612159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611345-611526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610871-610941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610410-610691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609731-609898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609269-609358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608897-609046:-1:exon

LOC121107553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 4 protein-like isoform X6
translation: MARGKARRARRPKASERSAASEAVGEARQRRVEEAAAMSQRLRVLLALWMAFSVQALASAGQLCRTWRDKATGMARKLAAAASGHKKMLFRLSIIVLLVTLAMVNVCVFKTCWAARRIWEDSTAQEIERLQQAASELRAQLDCYQTPDWALQSFGEDTGRQALLPCASPRLRPLALISSPIITGATIDTRRTSPIYELRSWFSRHCFWCSVNPPDTILQPGVSLGECWPMEGQQGQVVIRLRAKIRPSCVTLEHITPEMTPSGTASSAPRDVAVFGLDADSEEEVPLVSFTFDVGEGPTQTFLLKNNHSRAFRYIKVLVKSNWGHPRYTCLYRVQVHGKVVKTEDHRTAESLNG
SIO_010081: LOC121107553
subclass of: SO_0000673
so part of: LOC121107553
location: complement(join(608897..609046,609269..609358,609731..609898,610410..610691,610871..610941,611345..611526,611953..612074))
location: region:608897-612074:-1
so has part: feature:611953-612074:-1:exon
so has part: feature:611345-611526:-1:exon
so has part: feature:610871-610941:-1:exon
so has part: feature:610410-610691:-1:exon
so has part: feature:609731-609898:-1:exon
so has part: feature:609269-609358:-1:exon
so has part: feature:608897-609046:-1:exon

XP_040508412.1
type: Protein
SIO_000068: ncbiprotein

position:612074:-1
position: 612074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611953-612074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611345-611526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:610871-610941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610410-610691:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:609731-609898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609269-609358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608897-609046:-1:exon

OTUD7B
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 631390..664793
location: region:631390-664793:1
so has part: feature:631390-664793:1:exon
subclass of: SO_0000010

426041
type: Gene
SIO_000068: ncbigene

position:631390:1
position: 631390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664793:1
position: 664793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631390-664793:1:exon

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: OTUD7B
product: OTU deubiquitinase 7B, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903954.1
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(631390..632083,645130..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..664793)
location: region:631390-664793:1
so has part: feature:631390-632083:1:exon
so has part: feature:645130-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-664793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631390-632083:1:exon

position:632083:1
position: 632083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645130-645272:1:exon

position:645130:1
position: 645130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645272:1
position: 645272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:648647-648817:1:exon

position:648647:1
position: 648647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648817:1
position: 648817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:649555-649770:1:exon

position:649555:1
position: 649555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649770:1
position: 649770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:655130-655231:1:exon

position:655130:1
position: 655130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655231:1
position: 655231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:656131-656258:1:exon

position:656131:1
position: 656131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656258:1
position: 656258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:658499-658611:1:exon

position:658499:1
position: 658499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658611:1
position: 658611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:659014-659141:1:exon

position:659014:1
position: 659014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659141:1
position: 659141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:659756-659905:1:exon

position:659756:1
position: 659756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659905:1
position: 659905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:660257-660371:1:exon

position:660257:1
position: 660257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660371:1
position: 660371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:661363-661447:1:exon

position:661363:1
position: 661363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661447:1
position: 661447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:662251-664793:1:exon

position:662251:1
position: 662251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: OTUD7B
product: OTU deubiquitinase 7B, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652480.2
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(631390..631508,636953..639501,645130..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..664793)
location: region:631390-664793:1
so has part: feature:631390-631508:1:exon
so has part: feature:636953-639501:1:exon
so has part: feature:645130-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-664793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631390-631508:1:exon

position:631508:1
position: 631508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636953-639501:1:exon

position:636953:1
position: 636953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639501:1
position: 639501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645130-645272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:662251-664793:1:exon

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: OTUD7B
product: OTU deubiquitinase 7B, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903952.1
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(631390..631508,637330..639501,645130..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..664793)
location: region:631390-664793:1
so has part: feature:631390-631508:1:exon
so has part: feature:637330-639501:1:exon
so has part: feature:645130-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-664793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631390-631508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637330-639501:1:exon

position:637330:1
position: 637330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645130-645272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:662251-664793:1:exon

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: OTUD7B
product: OTU deubiquitinase 7B, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652479.2
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(631390..631508,645130..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..664793)
location: region:631390-664793:1
so has part: feature:631390-631508:1:exon
so has part: feature:645130-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-664793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631390-631508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645130-645272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:662251-664793:1:exon

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: OTUD7B
product: OTU deubiquitinase 7B, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652481.2
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(639617..641695,645130..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..664793)
location: region:639617-664793:1
so has part: feature:639617-641695:1:exon
so has part: feature:645130-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-664793:1:exon

position:639617:1
position: 639617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639617-641695:1:exon

position:641695:1
position: 641695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645130-645272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:662251-664793:1:exon

OTUD7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: OTUD7B
product: OTU deubiquitinase 7B, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903953.1
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(639617..640414,641544..641695,643348..643613,645130..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..664793)
location: region:639617-664793:1
so has part: feature:639617-640414:1:exon
so has part: feature:641544-641695:1:exon
so has part: feature:643348-643613:1:exon
so has part: feature:645130-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-664793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639617-640414:1:exon

position:640414:1
position: 640414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641544-641695:1:exon

position:641544:1
position: 641544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:643348-643613:1:exon

position:643348:1
position: 643348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643613:1
position: 643613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:645130-645272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662251-664793:1:exon

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B
translation: MDIVLSDFVRSTGAEPGLARDLLEGKNWDVSAALSDFEQLRQVHAGNLPHSFNEGRSYKPPEKEAARPGRPPLQRQDDIVQEKRLSRGISHASSTIVSLARSHVSSNGSSEHLLEMPISTFQLPDLTVYTEEFRSFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKSLYTLMDKGVEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRVHYGTNGGGCGGVESSEEPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPANKCHRSPLVLAYDQAHFSALVSMEQKEPTKDQAVIPLTDSEHKLLPVHFAVDPGKDWQWGKDDSDNVKLASVTLSLEAKLHLLHSYMNVKWITLPCDMQAPLAQPESPTASAGDDARSAAESGESDKESVCSSSASNGGSRGCKDKEKPKKDREKDKEKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKTMKGGVSNGQGDTLEKKKKGSLKTRKGSKEESSQGDLSVPGEKSCTGKAASEKPSDPYKYSNDVRLSLSILRAAMQGERKFIFAGHLKTGHRHQYQEEMIQQYLLDAEERFLAEQKQKEAEKKALGSAAPAKKLEVEVRGEEALHGPVYPQPPPAYTIHTPDLAIGAKMAAFPSSYSGVFTFPRPSVVSSSTEGSHPPGYHEGRRQVAGGSCGSLPPYATLPRHCAQARPQPSHVGRFSPTDMDVHPSFPTECEAPSCIPPQHSNGYREYLEQDGPHKGAPADKTRGRVLYSVQQTKCKQPNCSFYGHPETGNFCSCCYKEELKRKEREALVHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(645200..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..663540)
location: region:645200-663540:1
so has part: feature:645200-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-663540:1:exon

XP_040508413.1
type: Protein
SIO_000068: ncbiprotein

position:645200:1
position: 645200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663540:1
position: 663540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645200-645272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662251-663540:1:exon

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B
translation: MDIVLSDFVRSTGAEPGLARDLLEGKNWDVSAALSDFEQLRQVHAGNLPHSFNEGRSYKPPEKEAARPGRPPLQRQDDIVQEKRLSRGISHASSTIVSLARSHVSSNGSSEHLLEMPISTFQLPDLTVYTEEFRSFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKSLYTLMDKGVEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRVHYGTNGGGCGGVESSEEPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPANKCHRSPLVLAYDQAHFSALVSMEQKEPTKDQAVIPLTDSEHKLLPVHFAVDPGKDWQWGKDDSDNVKLASVTLSLEAKLHLLHSYMNVKWITLPCDMQAPLAQPESPTASAGDDARSAAESGESDKESVCSSSASNGGSRGCKDKEKPKKDREKDKEKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKTMKGGVSNGQGDTLEKKKKGSLKTRKGSKEESSQGDLSVPGEKSCTGKAASEKPSDPYKYSNDVRLSLSILRAAMQGERKFIFAGHLKTGHRHQYQEEMIQQYLLDAEERFLAEQKQKEAEKKALGSAAPAKKLEVEVRGEEALHGPVYPQPPPAYTIHTPDLAIGAKMAAFPSSYSGVFTFPRPSVVSSSTEGSHPPGYHEGRRQVAGGSCGSLPPYATLPRHCAQARPQPSHVGRFSPTDMDVHPSFPTECEAPSCIPPQHSNGYREYLEQDGPHKGAPADKTRGRVLYSVQQTKCKQPNCSFYGHPETGNFCSCCYKEELKRKEREALVHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(645200..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..663540)
location: region:645200-663540:1
so has part: feature:645200-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-663540:1:exon

XP_040508414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645200-645272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662251-663540:1:exon

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B
translation: MDIVLSDFVRSTGAEPGLARDLLEGKNWDVSAALSDFEQLRQVHAGNLPHSFNEGRSYKPPEKEAARPGRPPLQRQDDIVQEKRLSRGISHASSTIVSLARSHVSSNGSSEHLLEMPISTFQLPDLTVYTEEFRSFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKSLYTLMDKGVEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRVHYGTNGGGCGGVESSEEPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPANKCHRSPLVLAYDQAHFSALVSMEQKEPTKDQAVIPLTDSEHKLLPVHFAVDPGKDWQWGKDDSDNVKLASVTLSLEAKLHLLHSYMNVKWITLPCDMQAPLAQPESPTASAGDDARSAAESGESDKESVCSSSASNGGSRGCKDKEKPKKDREKDKEKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKTMKGGVSNGQGDTLEKKKKGSLKTRKGSKEESSQGDLSVPGEKSCTGKAASEKPSDPYKYSNDVRLSLSILRAAMQGERKFIFAGHLKTGHRHQYQEEMIQQYLLDAEERFLAEQKQKEAEKKALGSAAPAKKLEVEVRGEEALHGPVYPQPPPAYTIHTPDLAIGAKMAAFPSSYSGVFTFPRPSVVSSSTEGSHPPGYHEGRRQVAGGSCGSLPPYATLPRHCAQARPQPSHVGRFSPTDMDVHPSFPTECEAPSCIPPQHSNGYREYLEQDGPHKGAPADKTRGRVLYSVQQTKCKQPNCSFYGHPETGNFCSCCYKEELKRKEREALVHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(645200..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..663540)
location: region:645200-663540:1
so has part: feature:645200-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-663540:1:exon

XP_040508415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645200-645272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662251-663540:1:exon

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B
translation: MDIVLSDFVRSTGAEPGLARDLLEGKNWDVSAALSDFEQLRQVHAGNLPHSFNEGRSYKPPEKEAARPGRPPLQRQDDIVQEKRLSRGISHASSTIVSLARSHVSSNGSSEHLLEMPISTFQLPDLTVYTEEFRSFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKSLYTLMDKGVEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRVHYGTNGGGCGGVESSEEPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPANKCHRSPLVLAYDQAHFSALVSMEQKEPTKDQAVIPLTDSEHKLLPVHFAVDPGKDWQWGKDDSDNVKLASVTLSLEAKLHLLHSYMNVKWITLPCDMQAPLAQPESPTASAGDDARSAAESGESDKESVCSSSASNGGSRGCKDKEKPKKDREKDKEKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKTMKGGVSNGQGDTLEKKKKGSLKTRKGSKEESSQGDLSVPGEKSCTGKAASEKPSDPYKYSNDVRLSLSILRAAMQGERKFIFAGHLKTGHRHQYQEEMIQQYLLDAEERFLAEQKQKEAEKKALGSAAPAKKLEVEVRGEEALHGPVYPQPPPAYTIHTPDLAIGAKMAAFPSSYSGVFTFPRPSVVSSSTEGSHPPGYHEGRRQVAGGSCGSLPPYATLPRHCAQARPQPSHVGRFSPTDMDVHPSFPTECEAPSCIPPQHSNGYREYLEQDGPHKGAPADKTRGRVLYSVQQTKCKQPNCSFYGHPETGNFCSCCYKEELKRKEREALVHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(645200..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..663540)
location: region:645200-663540:1
so has part: feature:645200-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-663540:1:exon

XP_046759908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645200-645272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662251-663540:1:exon

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B
translation: MDIVLSDFVRSTGAEPGLARDLLEGKNWDVSAALSDFEQLRQVHAGNLPHSFNEGRSYKPPEKEAARPGRPPLQRQDDIVQEKRLSRGISHASSTIVSLARSHVSSNGSSEHLLEMPISTFQLPDLTVYTEEFRSFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKSLYTLMDKGVEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRVHYGTNGGGCGGVESSEEPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPANKCHRSPLVLAYDQAHFSALVSMEQKEPTKDQAVIPLTDSEHKLLPVHFAVDPGKDWQWGKDDSDNVKLASVTLSLEAKLHLLHSYMNVKWITLPCDMQAPLAQPESPTASAGDDARSAAESGESDKESVCSSSASNGGSRGCKDKEKPKKDREKDKEKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKTMKGGVSNGQGDTLEKKKKGSLKTRKGSKEESSQGDLSVPGEKSCTGKAASEKPSDPYKYSNDVRLSLSILRAAMQGERKFIFAGHLKTGHRHQYQEEMIQQYLLDAEERFLAEQKQKEAEKKALGSAAPAKKLEVEVRGEEALHGPVYPQPPPAYTIHTPDLAIGAKMAAFPSSYSGVFTFPRPSVVSSSTEGSHPPGYHEGRRQVAGGSCGSLPPYATLPRHCAQARPQPSHVGRFSPTDMDVHPSFPTECEAPSCIPPQHSNGYREYLEQDGPHKGAPADKTRGRVLYSVQQTKCKQPNCSFYGHPETGNFCSCCYKEELKRKEREALVHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(645200..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..663540)
location: region:645200-663540:1
so has part: feature:645200-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-663540:1:exon

XP_046759909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645200-645272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662251-663540:1:exon

OTUD7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: OTUD7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7B
translation: MDIVLSDFVRSTGAEPGLARDLLEGKNWDVSAALSDFEQLRQVHAGNLPHSFNEGRSYKPPEKEAARPGRPPLQRQDDIVQEKRLSRGISHASSTIVSLARSHVSSNGSSEHLLEMPISTFQLPDLTVYTEEFRSFIERDLIEQSMLVALEQAGRLNWWANVDPSCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKSLYTLMDKGVEREALKRRWRWQQTQQNKESGLVYTEEEWQKEWNELIKLASSEPRVHYGTNGGGCGGVESSEEPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPANKCHRSPLVLAYDQAHFSALVSMEQKEPTKDQAVIPLTDSEHKLLPVHFAVDPGKDWQWGKDDSDNVKLASVTLSLEAKLHLLHSYMNVKWITLPCDMQAPLAQPESPTASAGDDARSAAESGESDKESVCSSSASNGGSRGCKDKEKPKKDREKDKEKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKTMKGGVSNGQGDTLEKKKKGSLKTRKGSKEESSQGDLSVPGEKSCTGKAASEKPSDPYKYSNDVRLSLSILRAAMQGERKFIFAGHLKTGHRHQYQEEMIQQYLLDAEERFLAEQKQKEAEKKALGSAAPAKKLEVEVRGEEALHGPVYPQPPPAYTIHTPDLAIGAKMAAFPSSYSGVFTFPRPSVVSSSTEGSHPPGYHEGRRQVAGGSCGSLPPYATLPRHCAQARPQPSHVGRFSPTDMDVHPSFPTECEAPSCIPPQHSNGYREYLEQDGPHKGAPADKTRGRVLYSVQQTKCKQPNCSFYGHPETGNFCSCCYKEELKRKEREALVHRF
SIO_010081: OTUD7B
subclass of: SO_0000673
so part of: OTUD7B
location: join(645200..645272,648647..648817,649555..649770,655130..655231,656131..656258,658499..658611,659014..659141,659756..659905,660257..660371,661363..661447,662251..663540)
location: region:645200-663540:1
so has part: feature:645200-645272:1:exon
so has part: feature:648647-648817:1:exon
so has part: feature:649555-649770:1:exon
so has part: feature:655130-655231:1:exon
so has part: feature:656131-656258:1:exon
so has part: feature:658499-658611:1:exon
so has part: feature:659014-659141:1:exon
so has part: feature:659756-659905:1:exon
so has part: feature:660257-660371:1:exon
so has part: feature:661363-661447:1:exon
so has part: feature:662251-663540:1:exon

XP_046759910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645200-645272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648647-648817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649555-649770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655130-655231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656131-656258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658499-658611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659014-659141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659756-659905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660257-660371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661363-661447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662251-663540:1:exon

MTMR11
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 668520..676249
location: region:668520-676249:1
so has part: feature:668520-676249:1:exon
subclass of: SO_0000010

100857251
type: Gene
SIO_000068: ncbigene

position:668520:1
position: 668520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676249:1
position: 676249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668520-676249:1:exon

MTMR11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: MTMR11
product: myotubularin related protein 11
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652483.2
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(668520..668592,668679..668791,670214..670286,670377..670519,671536..671756,671838..671925,671999..672087,672175..672296,672384..672447,672692..672762,673065..673237,673338..673508,674065..674262,674494..674754,675427..676249)
location: region:668520-676249:1
so has part: feature:668520-668592:1:exon
so has part: feature:668679-668791:1:exon
so has part: feature:670214-670286:1:exon
so has part: feature:670377-670519:1:exon
so has part: feature:671536-671756:1:exon
so has part: feature:671838-671925:1:exon
so has part: feature:671999-672087:1:exon
so has part: feature:672175-672296:1:exon
so has part: feature:672384-672447:1:exon
so has part: feature:672692-672762:1:exon
so has part: feature:673065-673237:1:exon
so has part: feature:673338-673508:1:exon
so has part: feature:674065-674262:1:exon
so has part: feature:674494-674754:1:exon
so has part: feature:675427-676249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668520-668592:1:exon

position:668592:1
position: 668592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668679-668791:1:exon

position:668679:1
position: 668679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668791:1
position: 668791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670214-670286:1:exon

position:670214:1
position: 670214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670286:1
position: 670286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:670377-670519:1:exon

position:670377:1
position: 670377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670519:1
position: 670519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:671536-671756:1:exon

position:671536:1
position: 671536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671756:1
position: 671756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:671838-671925:1:exon

position:671838:1
position: 671838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671925:1
position: 671925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:671999-672087:1:exon

position:671999:1
position: 671999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672087:1
position: 672087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:672175-672296:1:exon

position:672175:1
position: 672175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672296:1
position: 672296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:672384-672447:1:exon

position:672384:1
position: 672384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672447:1
position: 672447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:672692-672762:1:exon

position:672692:1
position: 672692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672762:1
position: 672762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:673065-673237:1:exon

position:673065:1
position: 673065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673237:1
position: 673237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:673338-673508:1:exon

position:673338:1
position: 673338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673508:1
position: 673508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:674065-674262:1:exon

position:674065:1
position: 674065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674262:1
position: 674262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:674494-674754:1:exon

position:674494:1
position: 674494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674754:1
position: 674754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:675427-676249:1:exon

position:675427:1
position: 675427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTMR11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: MTMR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 11
translation: MSAARGGLSALPVLPGEVVLEAARGVRHRGAGGSVRGTLLCTNVRVAFVPGAQPPSFSPFLQSDYSVALRCIRTLVAASSFTKPTVLTATSTLSFIPEELAVFCRDFRLLRFHFPENGLGLQAFRVANAIAQAWETATWPGDSGSHVDATMGDDEDEEEGSPPTLLFESLQDWERELQRLGAVGWRVSAVNERFDMAPSLPRYLWVPSALLDHDLKRTFAHFQERRVARLCWHHPNGSDLLRAAGFHAASEPGSEDIRCLEVLLGAGCRPCVLADTAELPSPPDIQLAHLRLRALCLPGAAADEKWLSALEGTRWLEHIRACLRKAVEVASLLAGRRCSVVLQEPSDRDLSCLLASLVQLLADPHARSLRGFQSLVQREWVAAGHPFPQRLGLRRDSPREESPVFLLFLDCTWQLLRQFPAAFGFTEAYLLALHDSAFLPYCSTFLFSCQRQRGRGGVQQPRTQTYTPVSSRWDPPGSTVCRLPPVWAWGLRYSRQQRARFRNPAWDPGPVGTPDAVDPQNTGTPSSTWSGSSSGAVLALSKGSLTPQPFPWRSGRPPPRLLRWAPSLETLSDRGGDPIPPPPRGLLLPCAAGPSVRLWRRCYLRGLPEAQHGRLAPCPALLLEELALLQERLRAWQQDGAHAEPASSPLAPSR
SIO_010081: MTMR11
subclass of: SO_0000673
so part of: MTMR11
location: join(668547..668592,668679..668791,670214..670286,670377..670519,671536..671756,671838..671925,671999..672087,672175..672296,672384..672447,672692..672762,673065..673237,673338..673508,674065..674262,674494..674754,675427..675558)
location: region:668547-675558:1
so has part: feature:668547-668592:1:exon
so has part: feature:668679-668791:1:exon
so has part: feature:670214-670286:1:exon
so has part: feature:670377-670519:1:exon
so has part: feature:671536-671756:1:exon
so has part: feature:671838-671925:1:exon
so has part: feature:671999-672087:1:exon
so has part: feature:672175-672296:1:exon
so has part: feature:672384-672447:1:exon
so has part: feature:672692-672762:1:exon
so has part: feature:673065-673237:1:exon
so has part: feature:673338-673508:1:exon
so has part: feature:674065-674262:1:exon
so has part: feature:674494-674754:1:exon
so has part: feature:675427-675558:1:exon

XP_040508417.1
type: Protein
SIO_000068: ncbiprotein

position:668547:1
position: 668547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675558:1
position: 675558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668547-668592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668679-668791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670214-670286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670377-670519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671536-671756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671838-671925:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671999-672087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:672175-672296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:672384-672447:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672692-672762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:673065-673237:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:673338-673508:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674065-674262:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:674494-674754:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:675427-675558:1:exon

SF3B4
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: SF3B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 676512..681742
location: region:676512-681742:1
so has part: feature:676512-681742:1:exon
subclass of: SO_0000010

426042
type: Gene
SIO_000068: ncbigene

position:676512:1
position: 676512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681742:1
position: 681742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676512-681742:1:exon

SF3B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SF3B4
product: splicing factor 3b subunit 4, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903957.1
SIO_010081: SF3B4
subclass of: SO_0000673
so part of: SF3B4
location: join(676512..676575,676843..676925,677046..677174,677451..677993,678498..678692,680306..680476,681250..681742)
location: region:676512-681742:1
so has part: feature:676512-676575:1:exon
so has part: feature:676843-676925:1:exon
so has part: feature:677046-677174:1:exon
so has part: feature:677451-677993:1:exon
so has part: feature:678498-678692:1:exon
so has part: feature:680306-680476:1:exon
so has part: feature:681250-681742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676512-676575:1:exon

position:676575:1
position: 676575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676843-676925:1:exon

position:676843:1
position: 676843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676925:1
position: 676925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:677046-677174:1:exon

position:677046:1
position: 677046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677174:1
position: 677174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:677451-677993:1:exon

position:677451:1
position: 677451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677993:1
position: 677993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:678498-678692:1:exon

position:678498:1
position: 678498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678692:1
position: 678692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:680306-680476:1:exon

position:680306:1
position: 680306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680476:1
position: 680476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681250-681742:1:exon

position:681250:1
position: 681250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SF3B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: SF3B4
product: splicing factor 3b subunit 4, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_423721.8
SIO_010081: SF3B4
subclass of: SO_0000673
so part of: SF3B4
location: join(676512..676575,677046..677174,677451..677993,678498..678692,680306..680476,681250..681742)
location: region:676512-681742:1
so has part: feature:676512-676575:1:exon
so has part: feature:677046-677174:1:exon
so has part: feature:677451-677993:1:exon
so has part: feature:678498-678692:1:exon
so has part: feature:680306-680476:1:exon
so has part: feature:681250-681742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676512-676575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677046-677174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677451-677993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678498-678692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680306-680476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681250-681742:1:exon

SF3B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SF3B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor 3B subunit 4 isoform X1
translation: MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTALGPGVTPPGLPPPGSFPPPVPPPGAMPPGMPPAMPPPPMPPGAGAPGPPTGAAPTGGHPPHPHAFPPGGMHHPGMPPMQVHHGPPGMGQHHPGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPHFGSPMGHPGPMPHHGMRGPPPLMPPHGYNGPPRPPPYGYQRVPLPPRPAQRPPGVPPRGPLRGPLP
SIO_010081: SF3B4
subclass of: SO_0000673
so part of: SF3B4
location: join(676542..676575,677046..677174,677451..677993,678498..678692,680306..680476,681250..681434)
location: region:676542-681434:1
so has part: feature:676542-676575:1:exon
so has part: feature:677046-677174:1:exon
so has part: feature:677451-677993:1:exon
so has part: feature:678498-678692:1:exon
so has part: feature:680306-680476:1:exon
so has part: feature:681250-681434:1:exon

XP_423721.2
type: Protein
SIO_000068: ncbiprotein

position:676542:1
position: 676542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681434:1
position: 681434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676542-676575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677046-677174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677451-677993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678498-678692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680306-680476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681250-681434:1:exon

SF3B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: SF3B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor 3B subunit 4 isoform X2
translation: MPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTALGPGVTPPGLPPPGSFPPPVPPPGAMPPGMPPAMPPPPMPPGAGAPGPPTGAAPTGGHPPHPHAFPPGGMHHPGMPPMQVHHGPPGMGQHHPGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPHFGSPMGHPGPMPHHGMRGPPPLMPPHGYNGPPRPPPYGYQRVPLPPRPAQRPPGVPPRGPLRGPLP
SIO_010081: SF3B4
subclass of: SO_0000673
so part of: SF3B4
location: join(677141..677174,677451..677993,678498..678692,680306..680476,681250..681434)
location: region:677141-681434:1
so has part: feature:677141-677174:1:exon
so has part: feature:677451-677993:1:exon
so has part: feature:678498-678692:1:exon
so has part: feature:680306-680476:1:exon
so has part: feature:681250-681434:1:exon

XP_046759913.1
type: Protein
SIO_000068: ncbiprotein

position:677141:1
position: 677141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677141-677174:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677451-677993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678498-678692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:680306-680476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681250-681434:1:exon

LOC101748017
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101748017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 685370..712278
location: region:685370-712278:1
so has part: feature:685370-712278:1:exon
subclass of: SO_0000010

101748017
type: Gene
SIO_000068: ncbigene

position:685370:1
position: 685370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712278:1
position: 712278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685370-712278:1:exon

LOC101748017
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101748017
product: synaptic vesicle glycoprotein 2A-like
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_025143528.3
SIO_010081: LOC101748017
subclass of: SO_0000673
so part of: LOC101748017
location: join(685370..685536,688317..689030,694572..694752,694838..694989,697658..697791,698234..698323,700457..700567,700666..700754,702295..702459,704354..704487,704586..704789,706345..706504,712074..712278)
location: region:685370-712278:1
so has part: feature:685370-685536:1:exon
so has part: feature:688317-689030:1:exon
so has part: feature:694572-694752:1:exon
so has part: feature:694838-694989:1:exon
so has part: feature:697658-697791:1:exon
so has part: feature:698234-698323:1:exon
so has part: feature:700457-700567:1:exon
so has part: feature:700666-700754:1:exon
so has part: feature:702295-702459:1:exon
so has part: feature:704354-704487:1:exon
so has part: feature:704586-704789:1:exon
so has part: feature:706345-706504:1:exon
so has part: feature:712074-712278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685370-685536:1:exon

position:685536:1
position: 685536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688317-689030:1:exon

position:688317:1
position: 688317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689030:1
position: 689030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:694572-694752:1:exon

position:694572:1
position: 694572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694752:1
position: 694752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:694838-694989:1:exon

position:694838:1
position: 694838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694989:1
position: 694989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:697658-697791:1:exon

position:697658:1
position: 697658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697791:1
position: 697791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:698234-698323:1:exon

position:698234:1
position: 698234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698323:1
position: 698323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:700457-700567:1:exon

position:700457:1
position: 700457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700567:1
position: 700567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:700666-700754:1:exon

position:700666:1
position: 700666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700754:1
position: 700754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:702295-702459:1:exon

position:702295:1
position: 702295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702459:1
position: 702459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:704354-704487:1:exon

position:704354:1
position: 704354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704487:1
position: 704487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:704586-704789:1:exon

position:704586:1
position: 704586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704789:1
position: 704789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:706345-706504:1:exon

position:706345:1
position: 706345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706504:1
position: 706504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:712074-712278:1:exon

position:712074:1
position: 712074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101748017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101748017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptic vesicle glycoprotein 2A
translation: MDESFRDRTAFIRGAKDIAKEVKKHAAKKVSKGMDRVQDEYTKRSYSRFEEEDDDEDYAPQDGYYRGGEGAAEEEGASSDATEGHDEEDEIYEGEYQGIPRQDSLKGGERLGGEVTPGAFDDSEGQRRKDKEELAQQYELILQECGHGRFQWSLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTMPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIKREDELIEIQADTGAWHRRWLVRCLSLSQQVWSNFQQCFAPEYRRITLMMMAVWFTMSFSYYGLTVWFPDMIKHLQNIDYASRTKLFTREKVRHFTFNFTLENQIHQGGEYFNDKFIGLKMKSVTFEDSLFEDCYFEDITSSNTFFKNCTFISTMFYNTDLFEYKFINSRVLNSTFMHNKEGCQLDFSDDNNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGITKAVPILLASAALALGSSLALKLPETRGQVLQ
SIO_010081: LOC101748017
subclass of: SO_0000673
so part of: LOC101748017
location: join(688451..689030,694572..694752,694838..694989,697658..697791,698234..698323,700457..700567,700666..700754,702295..702459,704354..704487,704586..704789,706345..706504,712074..712257)
location: region:688451-712257:1
so has part: feature:688451-689030:1:exon
so has part: feature:694572-694752:1:exon
so has part: feature:694838-694989:1:exon
so has part: feature:697658-697791:1:exon
so has part: feature:698234-698323:1:exon
so has part: feature:700457-700567:1:exon
so has part: feature:700666-700754:1:exon
so has part: feature:702295-702459:1:exon
so has part: feature:704354-704487:1:exon
so has part: feature:704586-704789:1:exon
so has part: feature:706345-706504:1:exon
so has part: feature:712074-712257:1:exon

XP_024999296.1
type: Protein
SIO_000068: ncbiprotein

position:688451:1
position: 688451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712257:1
position: 712257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688451-689030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694572-694752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694838-694989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697658-697791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698234-698323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:700457-700567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:700666-700754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702295-702459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704354-704487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704586-704789:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706345-706504:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:712074-712257:1:exon

LOC107049580
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107049580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(716363..719964)
location: region:716363-719964:-1
so has part: feature:716363-719964:-1:exon
subclass of: SO_0000010

107049580
type: Gene
SIO_000068: ncbigene

position:716363:-1
position: 716363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719964:-1
position: 719964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716363-719964:-1:exon

LOC107049580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107049580
product: bolA-like protein 1, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273309.4
SIO_010081: LOC107049580
subclass of: SO_0000673
so part of: LOC107049580
location: complement(join(716363..718140,719911..719964))
location: region:716363-719964:-1
so has part: feature:719911-719964:-1:exon
so has part: feature:716363-718140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719911-719964:-1:exon

position:719911:-1
position: 719911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:716363-718140:-1:exon

position:718140:-1
position: 718140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107049580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107049580
product: bolA-like protein 1, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015273310.4
SIO_010081: LOC107049580
subclass of: SO_0000673
so part of: LOC107049580
location: complement(join(716363..718140,719874..719964))
location: region:716363-719964:-1
so has part: feature:719874-719964:-1:exon
so has part: feature:716363-718140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719874-719964:-1:exon

position:719874:-1
position: 719874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:716363-718140:-1:exon

LOC107049580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107049580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bolA-like protein 1 isoform X1
translation: MPPPTLSALPSGPVARSILSKLTAALQPTHLHLEDHSPRHGAPPGSETHFGLLVVSGRFEGLSPIERHRLVHAVLGAELRGPLHALSIVARTPQQWERDPNIPQPPPCMGGSKRDKRQAEGDAAASQ
SIO_010081: LOC107049580
subclass of: SO_0000673
so part of: LOC107049580
location: complement(717752..718135)
location: region:717752-718135:-1
so has part: feature:717752-718135:-1:exon

XP_015128795.2
type: Protein
SIO_000068: ncbiprotein

position:717752:-1
position: 717752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718135:-1
position: 718135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717752-718135:-1:exon

LOC107049580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107049580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bolA-like protein 1 isoform X1
translation: MPPPTLSALPSGPVARSILSKLTAALQPTHLHLEDHSPRHGAPPGSETHFGLLVVSGRFEGLSPIERHRLVHAVLGAELRGPLHALSIVARTPQQWERDPNIPQPPPCMGGSKRDKRQAEGDAAASQ
SIO_010081: LOC107049580
subclass of: SO_0000673
so part of: LOC107049580
location: complement(717752..718135)
location: region:717752-718135:-1
so has part: feature:717752-718135:-1:exon

XP_015128796.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717752-718135:-1:exon

LOC777082
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC777082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 723801..733088
location: region:723801-733088:1
so has part: feature:723801-733088:1:exon
subclass of: SO_0000010

777082
type: Gene
SIO_000068: ncbigene

position:723801:1
position: 723801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733088:1
position: 733088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723801-733088:1:exon

LOC777082
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC777082
product: steroid receptor seven-up
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025143600.2
SIO_010081: LOC777082
subclass of: SO_0000673
so part of: LOC777082
location: join(723801..724104,729994..730521,732814..733088)
location: region:723801-733088:1
so has part: feature:723801-724104:1:exon
so has part: feature:729994-730521:1:exon
so has part: feature:732814-733088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723801-724104:1:exon

position:724104:1
position: 724104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729994-730521:1:exon

position:729994:1
position: 729994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730521:1
position: 730521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:732814-733088:1:exon

position:732814:1
position: 732814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC777082
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC777082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group F member 1-A-like
translation: MALTAAPWPDPTQPPPDVPKTSDKGAPGGSGECVVCGDRASGRHYGQRTCEGCKSFFKRSVRRNLRYSCRGGRDCPVDQPHRNQCQYCRLRKCLRVGMRREAVQRGRTAPTPSSAAQYPPTPGDPSGSPGSLSTFISLLLRAEPYPPTRCGTQCLQPGGVLGIESVCELAARLLFSAIEWAKGIPFFPDLQLSDQVALLRVAWSELFVLNAAQCSMPLHAAPLLAAAGLHAAPMAAERVVAFMDHIRVLQEQVERLRVLHVDAAEYACLKAVALFSPDAAGLSEPGRVEGVQERSQCALEEYERGRHPAQPGRFGRLLLRLPALRRVSAAAIEQLFFVRLVGKTPIETLIRDMLLSGAAFCWPYGPMQ
SIO_010081: LOC777082
subclass of: SO_0000673
so part of: LOC777082
location: join(723801..724104,729994..730521,732814..733088)
location: region:723801-733088:1
so has part: feature:723801-724104:1:exon
so has part: feature:729994-730521:1:exon
so has part: feature:732814-733088:1:exon

XP_024999368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723801-724104:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729994-730521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:732814-733088:1:exon

LOC101751669
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC101751669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 749235..761143
location: region:749235-761143:1
so has part: feature:749235-761143:1:exon
subclass of: SO_0000010

101751669
type: Gene
SIO_000068: ncbigene

position:749235:1
position: 749235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761143:1
position: 761143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749235-761143:1:exon

LOC101751669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101751669
product: hemojuvelin-like, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903959.1
SIO_010081: LOC101751669
subclass of: SO_0000673
so part of: LOC101751669
location: join(749235..749359,754619..754781,756285..756787,760368..761143)
location: region:749235-761143:1
so has part: feature:749235-749359:1:exon
so has part: feature:754619-754781:1:exon
so has part: feature:756285-756787:1:exon
so has part: feature:760368-761143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749235-749359:1:exon

position:749359:1
position: 749359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754619-754781:1:exon

position:754619:1
position: 754619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754781:1
position: 754781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756285-756787:1:exon

position:756285:1
position: 756285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756787:1
position: 756787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:760368-761143:1:exon

position:760368:1
position: 760368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101751669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101751669
product: hemojuvelin-like, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903958.1
SIO_010081: LOC101751669
subclass of: SO_0000673
so part of: LOC101751669
location: join(749235..749277,754619..754781,756285..756787,760368..761143)
location: region:749235-761143:1
so has part: feature:749235-749277:1:exon
so has part: feature:754619-754781:1:exon
so has part: feature:756285-756787:1:exon
so has part: feature:760368-761143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749235-749277:1:exon

position:749277:1
position: 749277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754619-754781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756285-756787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760368-761143:1:exon

LOC101751669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101751669
product: hemojuvelin-like, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_046903960.1
SIO_010081: LOC101751669
subclass of: SO_0000673
so part of: LOC101751669
location: join(750897..751565,754619..754781,756285..756787,760368..761143)
location: region:750897-761143:1
so has part: feature:750897-751565:1:exon
so has part: feature:754619-754781:1:exon
so has part: feature:756285-756787:1:exon
so has part: feature:760368-761143:1:exon

position:750897:1
position: 750897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750897-751565:1:exon

position:751565:1
position: 751565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754619-754781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756285-756787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760368-761143:1:exon

LOC101751669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC101751669
product: hemojuvelin-like, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652484.2
SIO_010081: LOC101751669
subclass of: SO_0000673
so part of: LOC101751669
location: join(751649..751718,754619..754781,756285..756787,760368..761143)
location: region:751649-761143:1
so has part: feature:751649-751718:1:exon
so has part: feature:754619-754781:1:exon
so has part: feature:756285-756787:1:exon
so has part: feature:760368-761143:1:exon

position:751649:1
position: 751649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751649-751718:1:exon

position:751718:1
position: 751718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754619-754781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756285-756787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760368-761143:1:exon

LOC101751669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101751669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hemojuvelin
translation: MGKASCSKSPAQLEHGLFLQALLLLLLLCCRHVSSQCKILRCNSDFVAATLNLRGAARASAYCTALRSYSHCTRRTARTCRGDLAFHSAVHGIEDLMIQHNCSKDGPTSPPRPRPPAPDHQSFPASEMCDYEKTFRSKHGRPPRYRHCAAFGDPHVRTFHDDFHTCRVEGAWPLLDNEYLFVQATSAPVAEGSNATVTSKLTIIFKHMKECTEQKVYRAELDNVPAAFEDGSVTGGDRPGGGALHIRERSPGRHVEIRAPYIGTTIAVRQAARQLSFSIRAAEEVTRAFTAEQDLQLCVAGCPRGQRISRSVRSRAAAQAARALCKATLPVEDVYFQSCVFDVATSGDANFTMAARGALEDARDFLPDVEKLHIFQAGQGCPRAPPSFPVLLLLLLCGLCALWLQL
SIO_010081: LOC101751669
subclass of: SO_0000673
so part of: LOC101751669
location: join(754685..754781,756285..756787,760368..760988)
location: region:754685-760988:1
so has part: feature:754685-754781:1:exon
so has part: feature:756285-756787:1:exon
so has part: feature:760368-760988:1:exon

XP_040508418.1
type: Protein
SIO_000068: ncbiprotein

position:754685:1
position: 754685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760988:1
position: 760988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754685-754781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:756285-756787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760368-760988:1:exon

LOC101751669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101751669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hemojuvelin
translation: MGKASCSKSPAQLEHGLFLQALLLLLLLCCRHVSSQCKILRCNSDFVAATLNLRGAARASAYCTALRSYSHCTRRTARTCRGDLAFHSAVHGIEDLMIQHNCSKDGPTSPPRPRPPAPDHQSFPASEMCDYEKTFRSKHGRPPRYRHCAAFGDPHVRTFHDDFHTCRVEGAWPLLDNEYLFVQATSAPVAEGSNATVTSKLTIIFKHMKECTEQKVYRAELDNVPAAFEDGSVTGGDRPGGGALHIRERSPGRHVEIRAPYIGTTIAVRQAARQLSFSIRAAEEVTRAFTAEQDLQLCVAGCPRGQRISRSVRSRAAAQAARALCKATLPVEDVYFQSCVFDVATSGDANFTMAARGALEDARDFLPDVEKLHIFQAGQGCPRAPPSFPVLLLLLLCGLCALWLQL
SIO_010081: LOC101751669
subclass of: SO_0000673
so part of: LOC101751669
location: join(754685..754781,756285..756787,760368..760988)
location: region:754685-760988:1
so has part: feature:754685-754781:1:exon
so has part: feature:756285-756787:1:exon
so has part: feature:760368-760988:1:exon

XP_046759914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:754685-754781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:756285-756787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760368-760988:1:exon

LOC101751669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101751669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hemojuvelin
translation: MGKASCSKSPAQLEHGLFLQALLLLLLLCCRHVSSQCKILRCNSDFVAATLNLRGAARASAYCTALRSYSHCTRRTARTCRGDLAFHSAVHGIEDLMIQHNCSKDGPTSPPRPRPPAPDHQSFPASEMCDYEKTFRSKHGRPPRYRHCAAFGDPHVRTFHDDFHTCRVEGAWPLLDNEYLFVQATSAPVAEGSNATVTSKLTIIFKHMKECTEQKVYRAELDNVPAAFEDGSVTGGDRPGGGALHIRERSPGRHVEIRAPYIGTTIAVRQAARQLSFSIRAAEEVTRAFTAEQDLQLCVAGCPRGQRISRSVRSRAAAQAARALCKATLPVEDVYFQSCVFDVATSGDANFTMAARGALEDARDFLPDVEKLHIFQAGQGCPRAPPSFPVLLLLLLCGLCALWLQL
SIO_010081: LOC101751669
subclass of: SO_0000673
so part of: LOC101751669
location: join(754685..754781,756285..756787,760368..760988)
location: region:754685-760988:1
so has part: feature:754685-754781:1:exon
so has part: feature:756285-756787:1:exon
so has part: feature:760368-760988:1:exon

XP_046759915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:754685-754781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:756285-756787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760368-760988:1:exon

LOC101751669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC101751669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hemojuvelin
translation: MGKASCSKSPAQLEHGLFLQALLLLLLLCCRHVSSQCKILRCNSDFVAATLNLRGAARASAYCTALRSYSHCTRRTARTCRGDLAFHSAVHGIEDLMIQHNCSKDGPTSPPRPRPPAPDHQSFPASEMCDYEKTFRSKHGRPPRYRHCAAFGDPHVRTFHDDFHTCRVEGAWPLLDNEYLFVQATSAPVAEGSNATVTSKLTIIFKHMKECTEQKVYRAELDNVPAAFEDGSVTGGDRPGGGALHIRERSPGRHVEIRAPYIGTTIAVRQAARQLSFSIRAAEEVTRAFTAEQDLQLCVAGCPRGQRISRSVRSRAAAQAARALCKATLPVEDVYFQSCVFDVATSGDANFTMAARGALEDARDFLPDVEKLHIFQAGQGCPRAPPSFPVLLLLLLCGLCALWLQL
SIO_010081: LOC101751669
subclass of: SO_0000673
so part of: LOC101751669
location: join(754685..754781,756285..756787,760368..760988)
location: region:754685-760988:1
so has part: feature:754685-754781:1:exon
so has part: feature:756285-756787:1:exon
so has part: feature:760368-760988:1:exon

XP_046759916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:754685-754781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:756285-756787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760368-760988:1:exon

LOC121107554
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC121107554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(761385..762726)
location: region:761385-762726:-1
so has part: feature:761385-762726:-1:exon
subclass of: SO_0000010

121107554
type: Gene
SIO_000068: ncbigene

position:761385:-1
position: 761385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762726:-1
position: 762726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761385-762726:-1:exon

LOC121107554
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC121107554
product: uncharacterized LOC121107554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040652485.2
SIO_010081: LOC121107554
subclass of: SO_0000673
so part of: LOC121107554
location: complement(join(761385..762565,762657..762726))
location: region:761385-762726:-1
so has part: feature:762657-762726:-1:exon
so has part: feature:761385-762565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762657-762726:-1:exon

position:762657:-1
position: 762657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761385-762565:-1:exon

position:762565:-1
position: 762565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121107554
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC121107554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121107554
translation: MPTKGSPVPMRVTERSPMPTKGSPVPMRVTNANQRVTSANEGHKKVISANEGHQCQPKGLQCQQRSPVPMWDTKRSAKGSPMPMRVINANQAVSSANEGHKKVTSGNQRVTNANQGVISANEGHKKVTSGNQRVTSANEGHKKVTSANEGHQCQPKGLQCRQWSPVPMRVTSANQRVSSANNGHQCQCGTQKGLPKGSPMPTKGSPLPTRGSPVPLRVTSANEGHKKAHQCQPKGDVCQQWSPVLIWVTKRSDKRVTNANQRVTNANQRVTDANQRVTDAN
SIO_010081: LOC121107554
subclass of: SO_0000673
so part of: LOC121107554
location: complement(join(761790..762565,762657..762726))
location: region:761790-762726:-1
so has part: feature:762657-762726:-1:exon
so has part: feature:761790-762565:-1:exon

XP_040508419.1
type: Protein
SIO_000068: ncbiprotein

position:761790:-1
position: 761790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762657-762726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761790-762565:-1:exon

POLR3GL
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: POLR3GL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(779583..789750)
location: region:779583-789750:-1
so has part: feature:779583-789750:-1:exon
subclass of: SO_0000010

121107555
type: Gene
SIO_000068: ncbigene

position:779583:-1
position: 779583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789750:-1
position: 789750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779583-789750:-1:exon

POLR3GL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: POLR3GL
product: RNA polymerase III subunit GL
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_040652487.2
SIO_010081: POLR3GL
subclass of: SO_0000673
so part of: POLR3GL
location: complement(join(779583..779903,781642..781733,783911..784027,785532..785608,786897..786953,788310..788378,788469..788598,788735..788873,789723..789750))
location: region:779583-789750:-1
so has part: feature:789723-789750:-1:exon
so has part: feature:788735-788873:-1:exon
so has part: feature:788469-788598:-1:exon
so has part: feature:788310-788378:-1:exon
so has part: feature:786897-786953:-1:exon
so has part: feature:785532-785608:-1:exon
so has part: feature:783911-784027:-1:exon
so has part: feature:781642-781733:-1:exon
so has part: feature:779583-779903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789723-789750:-1:exon

position:789723:-1
position: 789723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:788735-788873:-1:exon

position:788735:-1
position: 788735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788873:-1
position: 788873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788469-788598:-1:exon

position:788469:-1
position: 788469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788598:-1
position: 788598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:788310-788378:-1:exon

position:788310:-1
position: 788310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788378:-1
position: 788378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786897-786953:-1:exon

position:786897:-1
position: 786897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786953:-1
position: 786953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:785532-785608:-1:exon

position:785532:-1
position: 785532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785608:-1
position: 785608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:783911-784027:-1:exon

position:783911:-1
position: 783911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784027:-1
position: 784027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:781642-781733:-1:exon

position:781642:-1
position: 781642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781733:-1
position: 781733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:779583-779903:-1:exon

position:779903:-1
position: 779903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLR3GL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: POLR3GL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC7-like
translation: MASRGRARGRGALTFSTEAVGIGKGDALPPPTLQPSPLFPAVECRAVPLPGGEEVEYMLALKQELRGAMKGLPYFVRPGAPHRDIERYSDKYQLSSPIDGAIEWNPDWRRFPRELKIRVRRLRKGRSCAPPPRTAPRPPPPDKEETIKKLEHLEKKEEEVTSEEEEKEEEEEGEGRDEEGEEYDEEEHEEETDYIMSYFDNGEDFGADSDDNGDEAVY
SIO_010081: POLR3GL
subclass of: SO_0000673
so part of: POLR3GL
location: complement(join(781647..781733,783911..784027,785532..785608,786897..786953,788310..788378,788469..788598,788735..788854))
location: region:781647-788854:-1
so has part: feature:788735-788854:-1:exon
so has part: feature:788469-788598:-1:exon
so has part: feature:788310-788378:-1:exon
so has part: feature:786897-786953:-1:exon
so has part: feature:785532-785608:-1:exon
so has part: feature:783911-784027:-1:exon
so has part: feature:781647-781733:-1:exon

XP_040508421.1
type: Protein
SIO_000068: ncbiprotein

position:781647:-1
position: 781647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788854:-1
position: 788854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788735-788854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788469-788598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788310-788378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786897-786953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785532-785608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783911-784027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781647-781733:-1:exon

LOC107051453
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107051453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 798540..801404
location: region:798540-801404:1
so has part: feature:798540-801404:1:exon
subclass of: SO_0000010

107051453
type: Gene
SIO_000068: ncbigene

position:798540:1
position: 798540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801404:1
position: 801404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798540-801404:1:exon

LOC107051453
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107051453
product: ankyrin repeat domain-containing protein 34A-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040652486.2
SIO_010081: LOC107051453
subclass of: SO_0000673
so part of: LOC107051453
location: 798540..801404
location: region:798540-801404:1
so has part: feature:798540-801404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798540-801404:1:exon

LOC107051453
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107051453
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 34A
translation: MVPTEGPTVAAEGPTVPAEGPALQRAVTAGRLRLTRLLLEGGAYINEGDARGRTALMAACRARYADPGERARMVRYLLRCGADPNIADAAGMTALMHACAERAGAAVAALLLEHGADPGARDYGGSSALLYAAQRGDRPTLQALLDACEARGREVIIITTATSPSGTKTTRQYLHAAPPSPASSASSSPAPCASPSDVELRAAGGETEREERVFRFPPPPPPPPPPPVAPPPPPRAPRRPLQRLNSEPGGLRAAGGAGGRTTTEGLRPCARPRRHSAEGRDADGPESPPPRRPPAAPAAAPRAPTCGRRAAPPHLPRVPPRSPPPRSRFAAAPRVGAAAPGAPRAGQSPPAAAPPARRSPPGSAVAQRAPSTAAPPLRAERADVAQRRRRGETLRDPTGTPTKPHGDPVENTQRHHGTPKRHHGDPEVTPWRTPQRPRGEPTETPRDPKVTPRDPTETPRDPKVAPWGP
SIO_010081: LOC107051453
subclass of: SO_0000673
so part of: LOC107051453
location: 798889..800299
location: region:798889-800299:1
so has part: feature:798889-800299:1:exon

XP_040508420.1
type: Protein
SIO_000068: ncbiprotein

position:798889:1
position: 798889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800299:1
position: 800299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798889-800299:1:exon

RBM8A
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: RBM8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(803741..806049)
location: region:803741-806049:-1
so has part: feature:803741-806049:-1:exon
subclass of: SO_0000010

107050968
type: Gene
SIO_000068: ncbigene

position:803741:-1
position: 803741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806049:-1
position: 806049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803741-806049:-1:exon

RBM8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: RBM8A
product: RNA binding motif protein 8A
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XM_015274638.4
SIO_010081: RBM8A
subclass of: SO_0000673
so part of: RBM8A
location: complement(join(803741..803850,804011..804147,804228..804364,805555..805632,805782..805841,805948..806049))
location: region:803741-806049:-1
so has part: feature:805948-806049:-1:exon
so has part: feature:805782-805841:-1:exon
so has part: feature:805555-805632:-1:exon
so has part: feature:804228-804364:-1:exon
so has part: feature:804011-804147:-1:exon
so has part: feature:803741-803850:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805948-806049:-1:exon

position:805948:-1
position: 805948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:805782-805841:-1:exon

position:805782:-1
position: 805782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805841:-1
position: 805841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:805555-805632:-1:exon

position:805555:-1
position: 805555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805632:-1
position: 805632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:804228-804364:-1:exon

position:804228:-1
position: 804228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804364:-1
position: 804364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:804011-804147:-1:exon

position:804011:-1
position: 804011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804147:-1
position: 804147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:803741-803850:-1:exon

position:803850:-1
position: 803850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: RBM8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 8A
translation: MADVLDLHEPSGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARVREDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQELMGQPVSVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
SIO_010081: RBM8A
subclass of: SO_0000673
so part of: RBM8A
location: complement(join(803805..803850,804011..804147,804228..804364,805555..805632,805782..805841,805948..806014))
location: region:803805-806014:-1
so has part: feature:805948-806014:-1:exon
so has part: feature:805782-805841:-1:exon
so has part: feature:805555-805632:-1:exon
so has part: feature:804228-804364:-1:exon
so has part: feature:804011-804147:-1:exon
so has part: feature:803805-803850:-1:exon

XP_015130124.1
type: Protein
SIO_000068: ncbiprotein

position:803805:-1
position: 803805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806014:-1
position: 806014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805948-806014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805782-805841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805555-805632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804228-804364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:804011-804147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803805-803850:-1:exon

LOC107051565
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: LOC107051565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(806464..825307)
location: region:806464-825307:-1
so has part: feature:806464-825307:-1:exon
subclass of: SO_0000010

107051565
type: Gene
SIO_000068: ncbigene

position:806464:-1
position: 806464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825307:-1
position: 825307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806464-825307:-1:exon

LOC107051565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: LOC107051565
product: LIX1-like protein
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_025143574.3
SIO_010081: LOC107051565
subclass of: SO_0000673
so part of: LOC107051565
location: complement(join(806464..809502,814362..814439,816365..816460,816685..816825,819887..820050,825004..825307))
location: region:806464-825307:-1
so has part: feature:825004-825307:-1:exon
so has part: feature:819887-820050:-1:exon
so has part: feature:816685-816825:-1:exon
so has part: feature:816365-816460:-1:exon
so has part: feature:814362-814439:-1:exon
so has part: feature:806464-809502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825004-825307:-1:exon

position:825004:-1
position: 825004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819887-820050:-1:exon

position:819887:-1
position: 819887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820050:-1
position: 820050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:816685-816825:-1:exon

position:816685:-1
position: 816685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816825:-1
position: 816825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:816365-816460:-1:exon

position:816365:-1
position: 816365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816460:-1
position: 816460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:814362-814439:-1:exon

position:814362:-1
position: 814362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814439:-1
position: 814439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:806464-809502:-1:exon

position:809502:-1
position: 809502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107051565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: LOC107051565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIX1-like protein
translation: MESVRAQRLQPGVGGTLRSLRPGVTGAPAAPPPAAAPPPPAVLGPGLGLPPPPPPLGLQGSAASAPPPPPGSGPPAVLREAVEAVVRSFAKHTQGYGRVNVVEALQEFWQMKQSRGADLKNGALVVYEMVPANSPPYVCYVTLPGGSCFGSFQFCPTKAEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNQEEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRQQMAMDWVSREQSSPGALSRELAATERELDEARLAGKELRFHKERKDILLLAAGQLGSLHSSGC
SIO_010081: LOC107051565
subclass of: SO_0000673
so part of: LOC107051565
location: complement(join(809260..809502,814362..814439,816365..816460,816685..816825,819887..820050,825004..825298))
location: region:809260-825298:-1
so has part: feature:825004-825298:-1:exon
so has part: feature:819887-820050:-1:exon
so has part: feature:816685-816825:-1:exon
so has part: feature:816365-816460:-1:exon
so has part: feature:814362-814439:-1:exon
so has part: feature:809260-809502:-1:exon

XP_024999342.2
type: Protein
SIO_000068: ncbiprotein

position:809260:-1
position: 809260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825298:-1
position: 825298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825004-825298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819887-820050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816685-816825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:816365-816460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:814362-814439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:809260-809502:-1:exon

PEX11B
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: PEX11B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 825942..831318
location: region:825942-831318:1
so has part: feature:825942-831318:1:exon
subclass of: SO_0000010

112530296
type: Gene
SIO_000068: ncbigene

position:825942:1
position: 825942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831318:1
position: 831318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825942-831318:1:exon

PEX11B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PEX11B
product: peroxisomal biogenesis factor 11 beta
experiment: COORDINATES: cap analysis [ECO:0007248]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_040652488.2
SIO_010081: PEX11B
subclass of: SO_0000673
so part of: PEX11B
location: join(825942..826030,826190..826305,826419..826621,830583..831318)
location: region:825942-831318:1
so has part: feature:825942-826030:1:exon
so has part: feature:826190-826305:1:exon
so has part: feature:826419-826621:1:exon
so has part: feature:830583-831318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825942-826030:1:exon

position:826030:1
position: 826030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:826190-826305:1:exon

position:826190:1
position: 826190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826305:1
position: 826305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:826419-826621:1:exon

position:826419:1
position: 826419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826621:1
position: 826621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:830583-831318:1:exon

position:830583:1
position: 830583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PEX11B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PEX11B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: peroxisomal membrane protein 11B
translation: METWVRFSAQSQAKERLFRAAQYACTLAGDALRRNGANPALLSSVKQLEAHLSLGRKLLRLGSSADALEAAKRAIHLSDMVLRFCVTLSHLNRAMYFACDNVLWAGKVGLAPSVDQEKWGQRSFRYYLFALIVNLSRDAYEIRLLMEREASGRRSKGAEEGQRGDVGLQPLGLRLQVQLRLLLHVLRGNPPLLLDVLRNACDLFIPLDKLGLYRSGPAFVGLCGLTSSVLSILTILHPWLKLKP
SIO_010081: PEX11B
subclass of: SO_0000673
so part of: PEX11B
location: join(825975..826030,826190..826305,826419..826621,830583..830943)
location: region:825975-830943:1
so has part: feature:825975-826030:1:exon
so has part: feature:826190-826305:1:exon
so has part: feature:826419-826621:1:exon
so has part: feature:830583-830943:1:exon

XP_040508422.1
type: Protein
SIO_000068: ncbiprotein

position:825975:1
position: 825975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830943:1
position: 830943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825975-826030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826190-826305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:826419-826621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:830583-830943:1:exon

POLR3C
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: POLR3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833022..837816
location: region:833022-837816:1
so has part: feature:833022-837816:1:exon
subclass of: SO_0000010

112530289
type: Gene
SIO_000068: ncbigene

position:833022:1
position: 833022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837816:1
position: 837816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833022-837816:1:exon

POLR3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: POLR3C
product: RNA polymerase III subunit C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 103 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_040652489.2
SIO_010081: POLR3C
subclass of: SO_0000673
so part of: POLR3C
location: join(833022..833199,833349..833450,834361..834410,835941..836090,837589..837816)
location: region:833022-837816:1
so has part: feature:833022-833199:1:exon
so has part: feature:833349-833450:1:exon
so has part: feature:834361-834410:1:exon
so has part: feature:835941-836090:1:exon
so has part: feature:837589-837816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833022-833199:1:exon

position:833199:1
position: 833199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:833349-833450:1:exon

position:833349:1
position: 833349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833450:1
position: 833450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:834361-834410:1:exon

position:834361:1
position: 834361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834410:1
position: 834410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835941-836090:1:exon

position:835941:1
position: 835941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836090:1
position: 836090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:837589-837816:1:exon

position:837589:1
position: 837589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLR3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: POLR3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC3
translation: MIPAKEAKEMLYRMLSENFVSLQEIPRTPDHAPSRTFYLYAVNVPSCARMLLQRCYKSVANLMERRQHETRENKRLLEKSQRVEAILGSMLATGAERAQLQEVEEMITAPERLQLDGLKRSVNKIDASENQVDETIFVLESFIESTVRRP
SIO_010081: POLR3C
subclass of: SO_0000673
so part of: POLR3C
location: join(833131..833199,833349..833450,834361..834410,835941..836090,837589..837670)
location: region:833131-837670:1
so has part: feature:833131-833199:1:exon
so has part: feature:833349-833450:1:exon
so has part: feature:834361-834410:1:exon
so has part: feature:835941-836090:1:exon
so has part: feature:837589-837670:1:exon

XP_040508423.1
type: Protein
SIO_000068: ncbiprotein

position:833131:1
position: 833131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837670:1
position: 837670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833131-833199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833349-833450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:834361-834410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835941-836090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837589-837670:1:exon

PIAS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: PIAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(838635..854493)
location: region:838635-854493:-1
so has part: feature:838635-854493:-1:exon
subclass of: SO_0000010

107055114
type: Gene
SIO_000068: ncbigene

position:838635:-1
position: 838635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854493:-1
position: 854493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838635-854493:-1:exon

PIAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PIAS3
product: protein inhibitor of activated STAT 3, transcript variant X2
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652490.2
SIO_010081: PIAS3
subclass of: SO_0000673
so part of: PIAS3
location: complement(join(838635..839394,841093..841130,841213..841337,842423..842585,844108..844232,844334..844494,846206..846279,847001..847106,848532..848645,848752..848893,850504..850588,853092..853515,854344..854493))
location: region:838635-854493:-1
so has part: feature:854344-854493:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848645:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:846206-846279:-1:exon
so has part: feature:844334-844494:-1:exon
so has part: feature:844108-844232:-1:exon
so has part: feature:842423-842585:-1:exon
so has part: feature:841213-841337:-1:exon
so has part: feature:841093-841130:-1:exon
so has part: feature:838635-839394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854493:-1:exon

position:854344:-1
position: 854344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

position:853092:-1
position: 853092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853515:-1
position: 853515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

position:850504:-1
position: 850504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850588:-1
position: 850588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

position:848752:-1
position: 848752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848893:-1
position: 848893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848645:-1:exon

position:848532:-1
position: 848532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848645:-1
position: 848645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

position:847001:-1
position: 847001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847106:-1
position: 847106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:846206-846279:-1:exon

position:846206:-1
position: 846206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846279:-1
position: 846279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:844334-844494:-1:exon

position:844334:-1
position: 844334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844494:-1
position: 844494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:844108-844232:-1:exon

position:844108:-1
position: 844108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844232:-1
position: 844232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:842423-842585:-1:exon

position:842423:-1
position: 842423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842585:-1
position: 842585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:841213-841337:-1:exon

position:841213:-1
position: 841213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841337:-1
position: 841337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:841093-841130:-1:exon

position:841093:-1
position: 841093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841130:-1
position: 841130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:838635-839394:-1:exon

position:839394:-1
position: 839394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PIAS3
product: protein inhibitor of activated STAT 3, transcript variant X3
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_040652491.2
SIO_010081: PIAS3
subclass of: SO_0000673
so part of: PIAS3
location: complement(join(838635..839394,841093..841130,841213..841337,842423..842585,844108..844232,844334..844410,846206..846279,847001..847106,848532..848666,848752..848893,850504..850588,853092..853515,854344..854493))
location: region:838635-854493:-1
so has part: feature:854344-854493:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848666:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:846206-846279:-1:exon
so has part: feature:844334-844410:-1:exon
so has part: feature:844108-844232:-1:exon
so has part: feature:842423-842585:-1:exon
so has part: feature:841213-841337:-1:exon
so has part: feature:841093-841130:-1:exon
so has part: feature:838635-839394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848666:-1:exon

position:848666:-1
position: 848666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846206-846279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844334-844410:-1:exon

position:844410:-1
position: 844410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:844108-844232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842423-842585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841213-841337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841093-841130:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838635-839394:-1:exon

PIAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9031
gene: PIAS3
product: protein inhibitor of activated STAT 3, transcript variant X1
experiment: COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]
transcript id: XM_015298477.4
SIO_010081: PIAS3
subclass of: SO_0000673
so part of: PIAS3
location: complement(join(838635..839394,841093..841130,841213..841337,842423..842585,844108..844232,844334..844494,846206..846279,847001..847106,848532..848666,848752..848893,850504..850588,853092..853515,854344..854493))
location: region:838635-854493:-1
so has part: feature:854344-854493:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848666:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:846206-846279:-1:exon
so has part: feature:844334-844494:-1:exon
so has part: feature:844108-844232:-1:exon
so has part: feature:842423-842585:-1:exon
so has part: feature:841213-841337:-1:exon
so has part: feature:841093-841130:-1:exon
so has part: feature:838635-839394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846206-846279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844334-844494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844108-844232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842423-842585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841213-841337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841093-841130:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838635-839394:-1:exon

PIAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PIAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase PIAS3 isoform X2
translation: MAEGAELEHMVMSFRVSELQVLLAFSGRNRSGRKHELLAKALQLLRSGCSAAVQMKIAELYRRRFPRRALSPSELPVLHGPVGPLPPLPAPCRLPYEPGAGGPLLVLESRREAEGAQLAPPVQPVHPDVKMQRLPFYDVYDELIKPTTLASASSQRFEEAHFTFALTPQQVQQILSSRDAVLGARCDHAVQVQLRFCLCETSCPQEDHFPPNLFVKVNGKLCPLPNGVEPKRPSRPVNITPLALLSAALPNTIVVNWSAECGRNYSLSVYLVKQLTAVALLQKLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLAVPCRATTCSHLQCFDAALYLQMNEKKPTWMCPVCDRGAPYDRLIIDGLFMEILNSCTDCDEIEFMEDGSWCPMRHRKEKRELCGAADLAPSLYAGSPEAAPPPPPEVEVIDLTLDSSSDEEGPPPRKHCGTPGAAHPTAGPRGALSAAPRPSSVLRCPTAALCSEFPPTIPDFTPSYTAAPELRGLDLLSFLQDDSQRCGRSVITSLRAADPLGRFLPPAGGAALRDGRRVGSAAPPPRRSNVISLD
SIO_010081: PIAS3
subclass of: SO_0000673
so part of: PIAS3
location: complement(join(839242..839394,841093..841130,841213..841337,842423..842585,844108..844232,844334..844494,846206..846279,847001..847106,848532..848645,848752..848893,850504..850588,853092..853515,854344..854367))
location: region:839242-854367:-1
so has part: feature:854344-854367:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848645:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:846206-846279:-1:exon
so has part: feature:844334-844494:-1:exon
so has part: feature:844108-844232:-1:exon
so has part: feature:842423-842585:-1:exon
so has part: feature:841213-841337:-1:exon
so has part: feature:841093-841130:-1:exon
so has part: feature:839242-839394:-1:exon

XP_040508424.1
type: Protein
SIO_000068: ncbiprotein

position:839242:-1
position: 839242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854367:-1
position: 854367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848645:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846206-846279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844334-844494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844108-844232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842423-842585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841213-841337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841093-841130:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:839242-839394:-1:exon

PIAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PIAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase PIAS3 isoform X3
translation: MAEGAELEHMVMSFRVSELQVLLAFSGRNRSGRKHELLAKALQLLRSGCSAAVQMKIAELYRRRFPRRALSPSELPVLHGPVGPLPPLPAPCRLPYEPGAGGPLLVLESRREAEGAQLAPPVQPVHPDVKMQRLPFYDVYDELIKPTTLASASSQRFEEAHFTFALTPQQVQQILSSRDAVLGARCDHAVQVQLRFCLCETSCPQEDHFPPNLFVKVNGKLCPLPGYLPPTKNGVEPKRPSRPVNITPLALLSAALPNTIVVNWSAECGRNYSLSVYLVKQLTAVALLQKLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPMNEKKPTWMCPVCDRGAPYDRLIIDGLFMEILNSCTDCDEIEFMEDGSWCPMRHRKEKRELCGAADLAPSLYAGSPEAAPPPPPEVEVIDLTLDSSSDEEGPPPRKHCGTPGAAHPTAGPRGALSAAPRPSSVLRCPTAALCSEFPPTIPDFTPSYTAAPELRGLDLLSFLQDDSQRCGRSVITSLRAADPLGRFLPPAGGAALRDGRRVGSAAPPPRRSNVISLD
SIO_010081: PIAS3
subclass of: SO_0000673
so part of: PIAS3
location: complement(join(839242..839394,841093..841130,841213..841337,842423..842585,844108..844232,844334..844410,846206..846279,847001..847106,848532..848666,848752..848893,850504..850588,853092..853515,854344..854367))
location: region:839242-854367:-1
so has part: feature:854344-854367:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848666:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:846206-846279:-1:exon
so has part: feature:844334-844410:-1:exon
so has part: feature:844108-844232:-1:exon
so has part: feature:842423-842585:-1:exon
so has part: feature:841213-841337:-1:exon
so has part: feature:841093-841130:-1:exon
so has part: feature:839242-839394:-1:exon

XP_040508425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846206-846279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844334-844410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844108-844232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842423-842585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841213-841337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841093-841130:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:839242-839394:-1:exon

PIAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: PIAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase PIAS3 isoform X1
translation: MAEGAELEHMVMSFRVSELQVLLAFSGRNRSGRKHELLAKALQLLRSGCSAAVQMKIAELYRRRFPRRALSPSELPVLHGPVGPLPPLPAPCRLPYEPGAGGPLLVLESRREAEGAQLAPPVQPVHPDVKMQRLPFYDVYDELIKPTTLASASSQRFEEAHFTFALTPQQVQQILSSRDAVLGARCDHAVQVQLRFCLCETSCPQEDHFPPNLFVKVNGKLCPLPGYLPPTKNGVEPKRPSRPVNITPLALLSAALPNTIVVNWSAECGRNYSLSVYLVKQLTAVALLQKLRAKGIRNPDHSRALIKEKLTADPDSEVATTSLRVSLMCPLGKMRLAVPCRATTCSHLQCFDAALYLQMNEKKPTWMCPVCDRGAPYDRLIIDGLFMEILNSCTDCDEIEFMEDGSWCPMRHRKEKRELCGAADLAPSLYAGSPEAAPPPPPEVEVIDLTLDSSSDEEGPPPRKHCGTPGAAHPTAGPRGALSAAPRPSSVLRCPTAALCSEFPPTIPDFTPSYTAAPELRGLDLLSFLQDDSQRCGRSVITSLRAADPLGRFLPPAGGAALRDGRRVGSAAPPPRRSNVISLD
SIO_010081: PIAS3
subclass of: SO_0000673
so part of: PIAS3
location: complement(join(839242..839394,841093..841130,841213..841337,842423..842585,844108..844232,844334..844494,846206..846279,847001..847106,848532..848666,848752..848893,850504..850588,853092..853515,854344..854367))
location: region:839242-854367:-1
so has part: feature:854344-854367:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848666:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:846206-846279:-1:exon
so has part: feature:844334-844494:-1:exon
so has part: feature:844108-844232:-1:exon
so has part: feature:842423-842585:-1:exon
so has part: feature:841213-841337:-1:exon
so has part: feature:841093-841130:-1:exon
so has part: feature:839242-839394:-1:exon

XP_015153963.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846206-846279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844334-844494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844108-844232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842423-842585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841213-841337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841093-841130:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:839242-839394:-1:exon

PIAS3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: PIAS3
product: protein inhibitor of activated STAT 3, transcript variant X5
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_003071816.3
SIO_010081: PIAS3
so part of: PIAS3
location: complement(join(841213..841337,842423..842563,844108..844200,844334..844494,847001..847106,848532..848666,848752..848893,850504..850588,853092..853515,854344..854493))
location: region:841213-854493:-1
so has part: feature:854344-854493:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848666:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:844334-844494:-1:exon
so has part: feature:844108-844200:-1:exon
so has part: feature:842423-842563:-1:exon
so has part: feature:841213-841337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844334-844494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844108-844200:-1:exon

position:844200:-1
position: 844200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:842423-842563:-1:exon

position:842563:-1
position: 842563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:841213-841337:-1:exon

PIAS3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: PIAS3
product: protein inhibitor of activated STAT 3, transcript variant X6
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_003071817.3
SIO_010081: PIAS3
so part of: PIAS3
location: complement(join(841213..841337,842423..842585,844108..844200,844334..844494,847001..847106,848532..848666,848752..848893,850504..850588,853092..853515,854344..854493))
location: region:841213-854493:-1
so has part: feature:854344-854493:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848666:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:844334-844494:-1:exon
so has part: feature:844108-844200:-1:exon
so has part: feature:842423-842585:-1:exon
so has part: feature:841213-841337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844334-844494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844108-844200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842423-842585:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:841213-841337:-1:exon

PIAS3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: PIAS3
product: protein inhibitor of activated STAT 3, transcript variant X4
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_003071815.3
SIO_010081: PIAS3
so part of: PIAS3
location: complement(join(841213..841337,842423..842563,844108..844232,844334..844494,846206..846279,847001..847106,848532..848666,848752..848893,850504..850588,853092..853515,854344..854493))
location: region:841213-854493:-1
so has part: feature:854344-854493:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848666:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:846206-846279:-1:exon
so has part: feature:844334-844494:-1:exon
so has part: feature:844108-844232:-1:exon
so has part: feature:842423-842563:-1:exon
so has part: feature:841213-841337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850504-850588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:848752-848893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848532-848666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847001-847106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846206-846279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844334-844494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844108-844232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842423-842563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841213-841337:-1:exon

PIAS3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9031
gene: PIAS3
product: protein inhibitor of activated STAT 3, transcript variant X9
experiment: COORDINATES: cap analysis [ECO:0007248]
transcript id: XR_003071818.3
SIO_010081: PIAS3
so part of: PIAS3
location: complement(join(842529..842585,844108..844232,844334..844494,847001..847106,848532..848666,848752..848893,850504..850588,853092..853515,854344..854493))
location: region:842529-854493:-1
so has part: feature:854344-854493:-1:exon
so has part: feature:853092-853515:-1:exon
so has part: feature:850504-850588:-1:exon
so has part: feature:848752-848893:-1:exon
so has part: feature:848532-848666:-1:exon
so has part: feature:847001-847106:-1:exon
so has part: feature:844334-844494:-1:exon
so has part: feature:844108-844232:-1:exon
so has part: feature:842529-842585:-1:exon

position:842529:-1
position: 842529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854344-854493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853092-853515:-1:exon