Numida meleagris isolate 19003 breed g44 Domestic line chromosome 15, NumMel1.0, whole genome shotgun sequence.
type: Entry
definition: Numida meleagris isolate 19003 breed g44 Domestic line chromosome 15, NumMel1.0, whole genome shotgun sequence.
sequence version: NC_034423.1
sequence date: 2017-06-07
sequence: sequence
division: CON
label: NC_034423.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA383663
dblink: SAMN05969731
keyword: WGS
keyword: RefSeq
source: Numida meleagris (helmeted guineafowl)
organism: Numida meleagris
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM007828.1.\nAssembly name: NumMel1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the INRA on 2017/06/01. The\noriginal whole-genome shotgun project has the accession\nMTSP00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: INRA\nAssembly Date :: JUL-2013\nAssembly Method :: AllPaths v. July-2013\nAssembly Name :: NumMel1.0\nReference-guided Assembly :: Gallus_gallus-5.0 (GCF_000002315.4)\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Numida meleagris Annotation Release\n 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 252168
topology: linear
so has quality: SO_0000987
location: 1..252168
location: region:1-252168:1
RO_0002162: 8996

NC_034423
type: RefSeq
SIO_000068: refseq

PRJNA383663
type: BioProject
SIO_000068: bioproject

SAMN05969731
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252168:1
position: 252168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-252168:1:source
so part of: sequence
organism: Numida meleagris
mol type: genomic DNA
isolate: 19003
chromosome: 15
sex: male
tissue type: Blood
breed: g44 Domestic line

8996
type: Taxonomy
SIO_000068: taxonomy

TNXB
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TNXB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <4..13139
location: region:4-13139:1
so has part: feature:4-13139:1:exon
subclass of: SO_0000010

110406666
type: Gene
SIO_000068: ncbigene

position:4:1
position: 4
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:13139:1
position: 13139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4-13139:1:exon

TNXB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: TNXB
product: tenascin XB
inference: similar to RNA sequence (same species):INSD:GBYG01020289.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 273 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413458.1
SIO_010081: TNXB
subclass of: SO_0000673
so part of: TNXB
location: join(<4..190,1358..1518,4359..4512,4631..>4755,11577..11673,11890..12051,12423..12586,12993..13139)
location: region:4-13139:1
so has part: feature:4-190:1:exon
so has part: feature:1358-1518:1:exon
so has part: feature:4359-4512:1:exon
so has part: feature:4631-4755:1:exon
so has part: feature:11577-11673:1:exon
so has part: feature:11890-12051:1:exon
so has part: feature:12423-12586:1:exon
so has part: feature:12993-13139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4-190:1:exon

position:190:1
position: 190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1358-1518:1:exon

position:1358:1
position: 1358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518:1
position: 1518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4359-4512:1:exon

position:4359:1
position: 4359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4512:1
position: 4512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4631-4755:1:exon

position:4631:1
position: 4631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4755:1
position: 4755
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11577-11673:1:exon

position:11577:1
position: 11577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11673:1
position: 11673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11890-12051:1:exon

position:11890:1
position: 11890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12051:1
position: 12051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12423-12586:1:exon

position:12423:1
position: 12423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12586:1
position: 12586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12993-13139:1:exon

position:12993:1
position: 12993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNXB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: TNXB
inference: similar to RNA sequence (same species):INSD:GBYG01020289.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 273 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-X
translation: GTFDSFTVQYKDAQGQPQVVPVDGGSRTVTVPGLLPSRRYKFNLYGVWGRKRLGPISTDAITAAVRKEEEPPSKPRLGELTASHVSPNSVQLEWSVPEGTFDSFTVQYKDAQGQPQSGLMCGQCPDRVTLLTAPQCSLCVGVLWMGSLGYCGGVEPMGVFAVSGRCSGAPGTLWVGTVWPRSAQLHWAPPRVPPDGYNLIYGPPGGPVKTLQLPPEATSKELWGLEPMGRYRVQLRGQGLEPLETTFDTPPLPHPHPRDCAEEQLNGPGPSREVLIFLGGDRQRPLRVFCDMESDGGGWLVFQRRMDGSTDFWRGWEEYVHGFGNISGEFWLGNAALHTLTATGPTELRVDLRTPSDSAFARYRDFAVGGPEDNFRLHLGAYSGTAGDALSYHAGSPFSTRDHDPRGRPRPCAVAYTGAWWYRNCHYANLNGRYGVPYDHQGINWYPWKGFEYSIPFTEMKLRPQRD
SIO_010081: TNXB
subclass of: SO_0000673
so part of: TNXB
location: join(<4..190,1358..1518,4359..4512,4631..>4755,11577..11673,11890..12051,12423..12586,12993..13073)
location: region:4-13073:1
so has part: feature:4-190:1:exon
so has part: feature:1358-1518:1:exon
so has part: feature:4359-4512:1:exon
so has part: feature:4631-4755:1:exon
so has part: feature:11577-11673:1:exon
so has part: feature:11890-12051:1:exon
so has part: feature:12423-12586:1:exon
so has part: feature:12993-13073:1:exon

XP_021269133.1
type: Protein
SIO_000068: ncbiprotein

position:13073:1
position: 13073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4-190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1358-1518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4359-4512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4631-4755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11577-11673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11890-12051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12423-12586:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12993-13073:1:exon

LOC110406665
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13088..17486)
location: region:13088-17486:-1
so has part: feature:13088-17486:-1:exon
subclass of: SO_0000010

110406665
type: Gene
SIO_000068: ncbigene

position:13088:-1
position: 13088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17486:-1
position: 17486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13088-17486:-1:exon

LOC110406665
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406665
product: steroid 21-hydroxylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021413455.1
SIO_010081: LOC110406665
subclass of: SO_0000673
so part of: LOC110406665
location: complement(join(13088..13417,13512..13615,13735..13904,14059..14244,14317..14387,14761..14868,15110..15205,15335..15486,16181..16271,16785..17486))
location: region:13088-17486:-1
so has part: feature:16785-17486:-1:exon
so has part: feature:16181-16271:-1:exon
so has part: feature:15335-15486:-1:exon
so has part: feature:15110-15205:-1:exon
so has part: feature:14761-14868:-1:exon
so has part: feature:14317-14387:-1:exon
so has part: feature:14059-14244:-1:exon
so has part: feature:13735-13904:-1:exon
so has part: feature:13512-13615:-1:exon
so has part: feature:13088-13417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16785-17486:-1:exon

position:16785:-1
position: 16785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16181-16271:-1:exon

position:16181:-1
position: 16181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16271:-1
position: 16271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15335-15486:-1:exon

position:15335:-1
position: 15335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15486:-1
position: 15486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15110-15205:-1:exon

position:15110:-1
position: 15110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15205:-1
position: 15205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14761-14868:-1:exon

position:14761:-1
position: 14761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14868:-1
position: 14868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14317-14387:-1:exon

position:14317:-1
position: 14317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14387:-1
position: 14387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14059-14244:-1:exon

position:14059:-1
position: 14059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14244:-1
position: 14244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13735-13904:-1:exon

position:13735:-1
position: 13735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13904:-1
position: 13904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13512-13615:-1:exon

position:13512:-1
position: 13512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13615:-1
position: 13615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13088-13417:-1:exon

position:13417:-1
position: 13417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406665
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406665
product: steroid 21-hydroxylase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_021413456.1
SIO_010081: LOC110406665
subclass of: SO_0000673
so part of: LOC110406665
location: complement(join(13088..13417,13512..13615,13735..13904,14059..14244,14317..14403,14761..14868,15110..15205,15335..15486,16181..16271,16785..17486))
location: region:13088-17486:-1
so has part: feature:16785-17486:-1:exon
so has part: feature:16181-16271:-1:exon
so has part: feature:15335-15486:-1:exon
so has part: feature:15110-15205:-1:exon
so has part: feature:14761-14868:-1:exon
so has part: feature:14317-14403:-1:exon
so has part: feature:14059-14244:-1:exon
so has part: feature:13735-13904:-1:exon
so has part: feature:13512-13615:-1:exon
so has part: feature:13088-13417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16785-17486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16181-16271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15335-15486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15110-15205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14761-14868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14317-14403:-1:exon

position:14403:-1
position: 14403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14059-14244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13735-13904:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13512-13615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13088-13417:-1:exon

LOC110406665
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406665
product: steroid 21-hydroxylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413454.1
SIO_010081: LOC110406665
subclass of: SO_0000673
so part of: LOC110406665
location: complement(join(13088..13417,13512..13615,13735..13904,14059..14403,14761..14868,15110..15205,15335..15486,16181..16270,16784..17486))
location: region:13088-17486:-1
so has part: feature:16784-17486:-1:exon
so has part: feature:16181-16270:-1:exon
so has part: feature:15335-15486:-1:exon
so has part: feature:15110-15205:-1:exon
so has part: feature:14761-14868:-1:exon
so has part: feature:14059-14403:-1:exon
so has part: feature:13735-13904:-1:exon
so has part: feature:13512-13615:-1:exon
so has part: feature:13088-13417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16784-17486:-1:exon

position:16784:-1
position: 16784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16181-16270:-1:exon

position:16270:-1
position: 16270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15335-15486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15110-15205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14761-14868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14059-14403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13735-13904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13512-13615:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13088-13417:-1:exon

LOC110406665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110406665 isoform X2
translation: MVVVMLLLLLLLALIWGGAPWWGRPPWGGALHLLHPGGPQHLHVLTRTYGDPLCLRLGGREVVVLSSAGAIREALARRWGDFVGRPHSYLASLVSRGGQDLALGDASPEWRRQRGATRGALARAVRHLEPLLELQGWALCQELSSYGAAPVDLFEAFAFHTCSTICRLAFGDLMPPEAEVRSFTRCVVELLEVWGRASVQALDVLPPLRGCGSCCAWWSAVTPSWRPRSGATRAVPPPQGTRCWGRCWGGTPLSLWGRWGGTACTWPSWISSSVALKRRQRLCCGLWPSCCTTPRCRTRCVRSCARCWAPRGPQSRGIWGDCRCSVPPSPRPSACVPLHPSRCPTVPGATLALQESRYLQDPSLSQTSLPHTTTPRSGTALMSSCLSGSCSQGPHGEHCCPSVVGHARVWGRHWLGQSSSCFWGTSYSDSAWNRHLTGLCPTWGSPPAPCCAVPRSTCASCPAHPIAPEPNVWDAWGSAGYSQLY
SIO_010081: LOC110406665
subclass of: SO_0000673
so part of: LOC110406665
location: complement(join(13118..13417,13512..13615,13735..13904,14059..14244,14317..14387,14761..14868,15110..15205,15335..15486,16181..16271,16785..16964))
location: region:13118-16964:-1
so has part: feature:16785-16964:-1:exon
so has part: feature:16181-16271:-1:exon
so has part: feature:15335-15486:-1:exon
so has part: feature:15110-15205:-1:exon
so has part: feature:14761-14868:-1:exon
so has part: feature:14317-14387:-1:exon
so has part: feature:14059-14244:-1:exon
so has part: feature:13735-13904:-1:exon
so has part: feature:13512-13615:-1:exon
so has part: feature:13118-13417:-1:exon

XP_021269130.1
type: Protein
SIO_000068: ncbiprotein

position:13118:-1
position: 13118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16964:-1
position: 16964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16785-16964:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16181-16271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15335-15486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15110-15205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14761-14868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14317-14387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14059-14244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13735-13904:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13512-13615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13118-13417:-1:exon

LOC110406665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroid 21-hydroxylase isoform X3
translation: MVVVMLLLLLLLALIWGGAPWWGRPPWGGALHLLHPGGPQHLHVLTRTYGDPLCLRLGGREVVVLSSAGAIREALARRWGDFVGRPHSYLASLVSRGGQDLALGDASPEWRRQRGATRGALARAVRHLEPLLELQGWALCQELSSYGAAPVDLFEAFAFHTCSTICRLAFGDLMPPEAEVRSFTRCVVELLEVWGRASVQALDVLPPLRALPNPGLRELLRLVERRDAFVETQIRCHQGCASPPGDTVLGALLGGDPAVPMGPLGGDRLHMALVDLFIGGTETTAAALLWAVAFLLHHPQVQDQVRAELRQVLGPTGTPKPGDMGRLPLLRATVTETLRLRPPAPLALPHCARRYSSIAGIPVPAGSIIIPNLFAAHHDPKIWDRPDEFLPERFLQPGAPWRALLPFGCGARSCVGEALARAELFVFLGHILQRFRLEPPPHGALPHLGVTAGTVLRCAPFHVRLVPCPPYSS
SIO_010081: LOC110406665
subclass of: SO_0000673
so part of: LOC110406665
location: complement(join(13170..13417,13512..13615,13735..13904,14059..14244,14317..14403,14761..14868,15110..15205,15335..15486,16181..16271,16785..16964))
location: region:13170-16964:-1
so has part: feature:16785-16964:-1:exon
so has part: feature:16181-16271:-1:exon
so has part: feature:15335-15486:-1:exon
so has part: feature:15110-15205:-1:exon
so has part: feature:14761-14868:-1:exon
so has part: feature:14317-14403:-1:exon
so has part: feature:14059-14244:-1:exon
so has part: feature:13735-13904:-1:exon
so has part: feature:13512-13615:-1:exon
so has part: feature:13170-13417:-1:exon

XP_021269131.1
type: Protein
SIO_000068: ncbiprotein

position:13170:-1
position: 13170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16785-16964:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16181-16271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15335-15486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15110-15205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14761-14868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14317-14403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14059-14244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13735-13904:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13512-13615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13170-13417:-1:exon

LOC110406665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroid 21-hydroxylase isoform X1
translation: MVVVMLLLLLLLALIWGGAPWWGRPPWGGALHLLHPGGPQHLHVLTRTYGDPLCLRLGGREVVVLSSAGAIREALARRWGDFVGRPHSYLASLVSRGGQDLALGDASPEWRRQRGATRGALARAVRHLEPLLELQGWALCQELSSYGAAPVDLFEAFAFHTCSTICRLAFGDLMPPEAEVRSFTRCVVELLEVWGRASVQALDVLPPLRALPNPGLRELLRLVERRDAFVETQIRCHQVGTWGHGDGAGGTQPQGVTHVSLQGCASPPGDTVLGALLGGDPAVPMGPLGGDRLHMALVDLFIGGTETTAAALLWAVAFLLHHPQVQDQVRAELRQVLGPTGTPKPGDMGRLPLLRATVTETLRLRPPAPLALPHCARRYSSIAGIPVPAGSIIIPNLFAAHHDPKIWDRPDEFLPERFLQPGAPWRALLPFGCGARSCVGEALARAELFVFLGHILQRFRLEPPPHGALPHLGVTAGTVLRCAPFHVRLVPCPPYSS
SIO_010081: LOC110406665
subclass of: SO_0000673
so part of: LOC110406665
location: complement(join(13170..13417,13512..13615,13735..13904,14059..14403,14761..14868,15110..15205,15335..15486,16181..16270,16784..16964))
location: region:13170-16964:-1
so has part: feature:16784-16964:-1:exon
so has part: feature:16181-16270:-1:exon
so has part: feature:15335-15486:-1:exon
so has part: feature:15110-15205:-1:exon
so has part: feature:14761-14868:-1:exon
so has part: feature:14059-14403:-1:exon
so has part: feature:13735-13904:-1:exon
so has part: feature:13512-13615:-1:exon
so has part: feature:13170-13417:-1:exon

XP_021269129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16784-16964:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16181-16270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15335-15486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15110-15205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14761-14868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14059-14403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13735-13904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13512-13615:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13170-13417:-1:exon

LOC110406667
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(19486..39931)
location: region:19486-39931:-1
so has part: feature:19486-39931:-1:exon
subclass of: SO_0000010

110406667
type: Gene
SIO_000068: ncbigene

position:19486:-1
position: 19486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39931:-1
position: 39931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19486-39931:-1:exon

LOC110406667
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406667
product: complement C4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413459.1
SIO_010081: LOC110406667
subclass of: SO_0000673
so part of: LOC110406667
location: complement(join(19486..19781,19923..20055,20383..20466,20795..20884,21203..21292,21397..21499,21643..21717,22009..22099,22290..22515,22617..22710,22852..22911,23126..23296,23402..23568,24047..24212,24586..24702,24831..24987,25196..25271,25610..25807,26293..26382,26458..26509,26816..27016,27389..27528,27838..27908,28035..28149,28392..28586,28931..29002,29157..29283,29607..29762,29977..30162,30500..30685,30883..31053,31584..31696,32116..32239,32371..32479,38142..38238,38307..38389,38670..38758,38856..38926,39266..39443,39698..39931))
location: region:19486-39931:-1
so has part: feature:39698-39931:-1:exon
so has part: feature:39266-39443:-1:exon
so has part: feature:38856-38926:-1:exon
so has part: feature:38670-38758:-1:exon
so has part: feature:38307-38389:-1:exon
so has part: feature:38142-38238:-1:exon
so has part: feature:32371-32479:-1:exon
so has part: feature:32116-32239:-1:exon
so has part: feature:31584-31696:-1:exon
so has part: feature:30883-31053:-1:exon
so has part: feature:30500-30685:-1:exon
so has part: feature:29977-30162:-1:exon
so has part: feature:29607-29762:-1:exon
so has part: feature:29157-29283:-1:exon
so has part: feature:28931-29002:-1:exon
so has part: feature:28392-28586:-1:exon
so has part: feature:28035-28149:-1:exon
so has part: feature:27838-27908:-1:exon
so has part: feature:27389-27528:-1:exon
so has part: feature:26816-27016:-1:exon
so has part: feature:26458-26509:-1:exon
so has part: feature:26293-26382:-1:exon
so has part: feature:25610-25807:-1:exon
so has part: feature:25196-25271:-1:exon
so has part: feature:24831-24987:-1:exon
so has part: feature:24586-24702:-1:exon
so has part: feature:24047-24212:-1:exon
so has part: feature:23402-23568:-1:exon
so has part: feature:23126-23296:-1:exon
so has part: feature:22852-22911:-1:exon
so has part: feature:22617-22710:-1:exon
so has part: feature:22290-22515:-1:exon
so has part: feature:22009-22099:-1:exon
so has part: feature:21643-21717:-1:exon
so has part: feature:21397-21499:-1:exon
so has part: feature:21203-21292:-1:exon
so has part: feature:20795-20884:-1:exon
so has part: feature:20383-20466:-1:exon
so has part: feature:19923-20055:-1:exon
so has part: feature:19486-19781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39698-39931:-1:exon

position:39698:-1
position: 39698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39266-39443:-1:exon

position:39266:-1
position: 39266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39443:-1
position: 39443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38856-38926:-1:exon

position:38856:-1
position: 38856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38926:-1
position: 38926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38670-38758:-1:exon

position:38670:-1
position: 38670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38758:-1
position: 38758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:38307-38389:-1:exon

position:38307:-1
position: 38307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38389:-1
position: 38389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:38142-38238:-1:exon

position:38142:-1
position: 38142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38238:-1
position: 38238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:32371-32479:-1:exon

position:32371:-1
position: 32371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32479:-1
position: 32479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:32116-32239:-1:exon

position:32116:-1
position: 32116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32239:-1
position: 32239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31584-31696:-1:exon

position:31584:-1
position: 31584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31696:-1
position: 31696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:30883-31053:-1:exon

position:30883:-1
position: 30883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31053:-1
position: 31053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:30500-30685:-1:exon

position:30500:-1
position: 30500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30685:-1
position: 30685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:29977-30162:-1:exon

position:29977:-1
position: 29977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30162:-1
position: 30162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:29607-29762:-1:exon

position:29607:-1
position: 29607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29762:-1
position: 29762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:29157-29283:-1:exon

position:29157:-1
position: 29157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29283:-1
position: 29283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:28931-29002:-1:exon

position:28931:-1
position: 28931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29002:-1
position: 29002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:28392-28586:-1:exon

position:28392:-1
position: 28392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28586:-1
position: 28586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:28035-28149:-1:exon

position:28035:-1
position: 28035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28149:-1
position: 28149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:27838-27908:-1:exon

position:27838:-1
position: 27838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27908:-1
position: 27908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:27389-27528:-1:exon

position:27389:-1
position: 27389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27528:-1
position: 27528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:26816-27016:-1:exon

position:26816:-1
position: 26816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27016:-1
position: 27016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:26458-26509:-1:exon

position:26458:-1
position: 26458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26509:-1
position: 26509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:26293-26382:-1:exon

position:26293:-1
position: 26293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26382:-1
position: 26382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:25610-25807:-1:exon

position:25610:-1
position: 25610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25807:-1
position: 25807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:25196-25271:-1:exon

position:25196:-1
position: 25196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25271:-1
position: 25271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:24831-24987:-1:exon

position:24831:-1
position: 24831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24987:-1
position: 24987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:24586-24702:-1:exon

position:24586:-1
position: 24586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24702:-1
position: 24702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:24047-24212:-1:exon

position:24047:-1
position: 24047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24212:-1
position: 24212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:23402-23568:-1:exon

position:23402:-1
position: 23402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23568:-1
position: 23568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:23126-23296:-1:exon

position:23126:-1
position: 23126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23296:-1
position: 23296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:22852-22911:-1:exon

position:22852:-1
position: 22852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22911:-1
position: 22911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:22617-22710:-1:exon

position:22617:-1
position: 22617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22710:-1
position: 22710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:22290-22515:-1:exon

position:22290:-1
position: 22290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22515:-1
position: 22515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:22009-22099:-1:exon

position:22009:-1
position: 22009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22099:-1
position: 22099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:21643-21717:-1:exon

position:21643:-1
position: 21643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21717:-1
position: 21717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:21397-21499:-1:exon

position:21397:-1
position: 21397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21499:-1
position: 21499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:21203-21292:-1:exon

position:21203:-1
position: 21203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21292:-1
position: 21292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:20795-20884:-1:exon

position:20795:-1
position: 20795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20884:-1
position: 20884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:20383-20466:-1:exon

position:20383:-1
position: 20383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20466:-1
position: 20466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:19923-20055:-1:exon

position:19923:-1
position: 19923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20055:-1
position: 20055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:19486-19781:-1:exon

position:19781:-1
position: 19781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406667
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C4-like
translation: MEQLWGWWLKQCPPRLVLVAPRRVALGTPMGLLVAAAGPVTGTVTAWAEGDRGAGPCALPVPFALTPQNNFNQLLRIEVTPVQAERCGALWGRGLLLEAHSPRLPPPSTRSLRVALGGPRGHLIVQTDKPLYAPRQTVRFRVFSMDPDLQPNPEPVLVTITNPLGARVREVQRVPLDTMLSDQLVLPDIALPGTWHVRAQLAASPNTNGSTAFEVRKYVLPGFEVRIRPERGFVVLSDPEPAPLRIHLHVQFPDGAPVWGRAQLRVGLRDAGGRGGRFLRGLEQQCQVTEGHASLEVSPVGVAKAAGVALTDLQGALLRLAVGVVESAGGELVEREESVPLVLSQWTLQLQQSPRFFVPGAPYTLLGRVLQAGGGAAPGVPVRVTVGVTGAPAPPLIELRADNSGDITVPINVPKGATRMELSVEAGQRGVPPARAQLLVTPVAAVSGRFLVLGGPRGPLRPGEVLRLQLHHMGPPPAPQRFHILAMARGRVVVAHTVATQVTLTEVALPVTADMAPYLHVVAFFLSGGQVVAATWGGAVRGGCDEQVRVKVPPRGTTLRPQNPLTVTVTTGTPVTVAIGAIDTTVLSLEPRHRLNAAKVEAALGSSDLGCSPGGGPDAAGIFGAAGLVLGLRGGSPTVQSAPHCPPGPTRQRRSLELLQLLEEKAGPWRDNPLMWRCCRDGATALPIRATCHQRGQRVTAAGGCRDAFLQCCTVAQNLRRKRQHGGLGRVLEAELEQQLLDDDEDIPTRSFFPESWLWRRVRVTGTARLSVLLPDSITTWEIQAVAIVPGHGLCVAEPQRVTVTQDVRVALRLPPSVRPREQLQLQPLIHSRLPRSINVTVTLSAVEGVCAALDGAPQKLELPPGRAVAAPLTLVALHPGDIPITITARGPWGLGDRITRVLHVEPEGELHLEETTYVLDTDDKQGRSLELPGDVPAEIVPDGDFSMSIRVSGRVPGWALQGALGVGDSLLRSPRGCGEQSLMAMAPTAAALRFLDESEGWGQLPPGHRQRGLRTLQRGFERVQSFRKSDGSYGAWLHRDSSTWLTALVLRVLALSRPYLPVAASGPAASLRWVLGQQRPDGAFLEHRAVVHREMQGGVADPGPEATVSLTAFVVVALHGARTLLPPDSPELPLLDKSLSRASTFLRGRVERLGTYGTAITSYALALVDTAPPGPHPAVQRLRRMARSAHGGRANFWPSGGPAATVEATGYALLALLQSRDIAGAGRAARWLRQQSNYGGGFHSTQDTLVALEALAQMWLQWGRGRTSGLNLGLSWPGGARGRAGGTRVTLKPGLEPLEQELQVPLGSPVTVQVEGHGEGTLTVLRQFRLLSPPNATCRALHLEVAITGPILYHDEDYENYEDYEEAEPKEGEEPTERAVPVEGAEPVEGEGPADGPAPLSPMSLWDARKRRRRSTDDPAHEVAFLVCFWRSPGVALTGMVVVEISLLSGFSPHRTDLDKLRDVVDHWISHYELDGNRLVLYLDEVPLERQCLSFGATQDVAVGYMQPAMAVIYDYYEPGQRCTVFYNAPLRSSSIATLCSPKICECAQGGCPHAQRRTQEVTADDRHDFACYSPRVDYALVVRVLSQSEIGAFVGFETEIKEVLLGGQDTTAAPGERRRLLVRKSCALRLQPHNIYLVMGGNGGTQDPEGRPQFLLGPQSWVEEVPSAGRCRATRLRGHCTQLQEFRTRLSQLGCQL
SIO_010081: LOC110406667
subclass of: SO_0000673
so part of: LOC110406667
location: complement(join(19640..19781,19923..20055,20383..20466,20795..20884,21203..21292,21397..21499,21643..21717,22009..22099,22290..22515,22617..22710,22852..22911,23126..23296,23402..23568,24047..24212,24586..24702,24831..24987,25196..25271,25610..25807,26293..26382,26458..26509,26816..27016,27389..27528,27838..27908,28035..28149,28392..28586,28931..29002,29157..29283,29607..29762,29977..30162,30500..30685,30883..31053,31584..31696,32116..32239,32371..32479,38142..38238,38307..38389,38670..38758,38856..38926,39266..39443,39698..39931))
location: region:19640-39931:-1
so has part: feature:39698-39931:-1:exon
so has part: feature:39266-39443:-1:exon
so has part: feature:38856-38926:-1:exon
so has part: feature:38670-38758:-1:exon
so has part: feature:38307-38389:-1:exon
so has part: feature:38142-38238:-1:exon
so has part: feature:32371-32479:-1:exon
so has part: feature:32116-32239:-1:exon
so has part: feature:31584-31696:-1:exon
so has part: feature:30883-31053:-1:exon
so has part: feature:30500-30685:-1:exon
so has part: feature:29977-30162:-1:exon
so has part: feature:29607-29762:-1:exon
so has part: feature:29157-29283:-1:exon
so has part: feature:28931-29002:-1:exon
so has part: feature:28392-28586:-1:exon
so has part: feature:28035-28149:-1:exon
so has part: feature:27838-27908:-1:exon
so has part: feature:27389-27528:-1:exon
so has part: feature:26816-27016:-1:exon
so has part: feature:26458-26509:-1:exon
so has part: feature:26293-26382:-1:exon
so has part: feature:25610-25807:-1:exon
so has part: feature:25196-25271:-1:exon
so has part: feature:24831-24987:-1:exon
so has part: feature:24586-24702:-1:exon
so has part: feature:24047-24212:-1:exon
so has part: feature:23402-23568:-1:exon
so has part: feature:23126-23296:-1:exon
so has part: feature:22852-22911:-1:exon
so has part: feature:22617-22710:-1:exon
so has part: feature:22290-22515:-1:exon
so has part: feature:22009-22099:-1:exon
so has part: feature:21643-21717:-1:exon
so has part: feature:21397-21499:-1:exon
so has part: feature:21203-21292:-1:exon
so has part: feature:20795-20884:-1:exon
so has part: feature:20383-20466:-1:exon
so has part: feature:19923-20055:-1:exon
so has part: feature:19640-19781:-1:exon

XP_021269134.1
type: Protein
SIO_000068: ncbiprotein

position:19640:-1
position: 19640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39698-39931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39266-39443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38856-38926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38670-38758:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38307-38389:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:38142-38238:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32371-32479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32116-32239:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31584-31696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30883-31053:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:30500-30685:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:29977-30162:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:29607-29762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29157-29283:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:28931-29002:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:28392-28586:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:28035-28149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:27838-27908:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:27389-27528:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26816-27016:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26458-26509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:26293-26382:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:25610-25807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:25196-25271:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:24831-24987:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:24586-24702:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:24047-24212:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:23402-23568:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:23126-23296:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:22852-22911:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:22617-22710:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:22290-22515:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:22009-22099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:21643-21717:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:21397-21499:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:21203-21292:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:20795-20884:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:20383-20466:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:19923-20055:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:19640-19781:-1:exon

LOC110406685
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <37482..45478
location: region:37482-45478:1
so has part: feature:37482-45478:1:exon
subclass of: SO_0000010

110406685
type: Gene
SIO_000068: ncbigene

position:37482:1
position: 37482
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:45478:1
position: 45478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37482-45478:1:exon

LOC110406685
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406685
product: class I histocompatibility antigen, F10 alpha chain-like
inference: similar to RNA sequence (same species):INSD:GBYG01029160.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 695 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 194 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413503.1
SIO_010081: LOC110406685
subclass of: SO_0000673
so part of: LOC110406685
location: join(<37482..37563,37657..>37929,<45087..45119,45243..45478)
location: region:37482-45478:1
so has part: feature:37482-37563:1:exon
so has part: feature:37657-37929:1:exon
so has part: feature:45087-45119:1:exon
so has part: feature:45243-45478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37482-37563:1:exon

position:37563:1
position: 37563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37657-37929:1:exon

position:37657:1
position: 37657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37929:1
position: 37929
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45087-45119:1:exon

position:45087:1
position: 45087
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:45119:1
position: 45119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45243-45478:1:exon

position:45243:1
position: 45243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406685
inference: similar to RNA sequence (same species):INSD:GBYG01029160.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 657 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like
translation: MGPFWAPGLGLLLGAVCGAAGELHSLRYFHTAVTDPGPGMPSFVTVGYVDGEIFVHYDSDTRKYVPRTEWIAANVDQQYWDGETRIAQGNEQIDRGDLVTLQGRFNQSGGSHTIQWMSGCDILEDGTTRGYRQDAYDGRDFIAFDKDTMTYTAAVPEAVPTKRKWEDGSDAEMWKQYLEGTCVEWLRRYVQYGKAELERRERPEVRVSGKEADGILTLSCRAHGFYPRPIAISWMKDGAVRDQDTHSGGTVPNGDGTYHAWASIEALPGDGDKYRCRVEHASLPQPGLYSWEPRSNLVPIVAGGAVTVVAVAIMAGVGFAVWKRRAGKNEKGYNIAPDRDGGSSSSATGSDRAT
SIO_010081: LOC110406685
subclass of: SO_0000673
so part of: LOC110406685
location: join(<37482..37563,37657..>37929,<45087..45119,45243..45262)
location: region:37482-45262:1
so has part: feature:37482-37563:1:exon
so has part: feature:37657-37929:1:exon
so has part: feature:45087-45119:1:exon
so has part: feature:45243-45262:1:exon

XP_021269178.1
type: Protein
SIO_000068: ncbiprotein

position:45262:1
position: 45262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37482-37563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37657-37929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45087-45119:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45243-45262:1:exon

TAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(45942..51171)
location: region:45942-51171:-1
so has part: feature:45942-51171:-1:exon
subclass of: SO_0000010

110406673
type: Gene
SIO_000068: ncbigene

position:45942:-1
position: 45942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51171:-1
position: 51171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45942-51171:-1:exon

TAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: TAP1
product: transporter 1, ATP binding cassette subfamily B member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_021413472.1
SIO_010081: TAP1
subclass of: SO_0000673
so part of: TAP1
location: complement(join(45942..46653,46776..46912,46984..47143,47454..47627,48052..48237,48573..48701,49165..49362,49778..49983,50060..50190,50265..50367,50988..51171))
location: region:45942-51171:-1
so has part: feature:50988-51171:-1:exon
so has part: feature:50265-50367:-1:exon
so has part: feature:50060-50190:-1:exon
so has part: feature:49778-49983:-1:exon
so has part: feature:49165-49362:-1:exon
so has part: feature:48573-48701:-1:exon
so has part: feature:48052-48237:-1:exon
so has part: feature:47454-47627:-1:exon
so has part: feature:46984-47143:-1:exon
so has part: feature:46776-46912:-1:exon
so has part: feature:45942-46653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50988-51171:-1:exon

position:50988:-1
position: 50988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50265-50367:-1:exon

position:50265:-1
position: 50265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50367:-1
position: 50367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50060-50190:-1:exon

position:50060:-1
position: 50060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50190:-1
position: 50190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49778-49983:-1:exon

position:49778:-1
position: 49778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49983:-1
position: 49983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:49165-49362:-1:exon

position:49165:-1
position: 49165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49362:-1
position: 49362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:48573-48701:-1:exon

position:48573:-1
position: 48573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48701:-1
position: 48701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:48052-48237:-1:exon

position:48052:-1
position: 48052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48237:-1
position: 48237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:47454-47627:-1:exon

position:47454:-1
position: 47454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47627:-1
position: 47627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:46984-47143:-1:exon

position:46984:-1
position: 46984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47143:-1
position: 47143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46776-46912:-1:exon

position:46776:-1
position: 46776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46912:-1
position: 46912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:45942-46653:-1:exon

position:46653:-1
position: 46653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: TAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 1
translation: MGAVGAGRRLLLSLSPERRRCAAVMGLMAASALSEMAVPYYTGRASDWVAREDELAAILPMVLLGLGSAVTELVCDVIFVGTLSRTQGRLQRRVFAAVLRQDIAELRADGAGDVATRVTRDAEDVREALGEALSLLLWYLARGACLFATMAWLSPRMALLTALALPLLLALPRAVGRFRQALAPQVQKAQAQASEVAVETFQAMATVRSFANEDGAAARYRQRLQHSHRLEKKDAALYTVSVWTSGFSALALKMGILYYGGQLVAAGTVSTGDLVTFLLYQMQFTDVVEVLLRYYPTLTKAVGSSEKIFEFLDREPEVAPSGTMAPGDLQGHLQLEDIWFSYPGRQEPVLKGVSLELRPGEVLALLGPPGAGKSTLVALVSRLRQPTAGRLLLDGHPLPAYQHSYLCRKVAVVPQEPLLFARSLHANIAYGPGRWSRAQVTAAARRVGAHNFITRLPQGYDTEVGELGGQLSGGQRQAVAIARALVRDPRVLILDEHTSALDTESQQQVEQEILAAEGTGRAVLLVTGRAALAARAQRVAVLEGGEVREQGPPHEVLHPGSRAWQLLQDRGQQGAAGDRGSGEEGQQD
SIO_010081: TAP1
subclass of: SO_0000673
so part of: TAP1
location: complement(join(46411..46653,46776..46912,46984..47143,47454..47627,48052..48237,48573..48701,49165..49362,49778..49983,50060..50190,50265..50367,50988..51087))
location: region:46411-51087:-1
so has part: feature:50988-51087:-1:exon
so has part: feature:50265-50367:-1:exon
so has part: feature:50060-50190:-1:exon
so has part: feature:49778-49983:-1:exon
so has part: feature:49165-49362:-1:exon
so has part: feature:48573-48701:-1:exon
so has part: feature:48052-48237:-1:exon
so has part: feature:47454-47627:-1:exon
so has part: feature:46984-47143:-1:exon
so has part: feature:46776-46912:-1:exon
so has part: feature:46411-46653:-1:exon

XP_021269147.1
type: Protein
SIO_000068: ncbiprotein

position:46411:-1
position: 46411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51087:-1
position: 51087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50988-51087:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50265-50367:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50060-50190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49778-49983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49165-49362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48573-48701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48052-48237:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47454-47627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46984-47143:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46776-46912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46411-46653:-1:exon

TAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 51253..55091
location: region:51253-55091:1
so has part: feature:51253-55091:1:exon
subclass of: SO_0000010

110406669
type: Gene
SIO_000068: ncbigene

position:51253:1
position: 51253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55091:1
position: 55091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51253-55091:1:exon

TAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: TAP2
product: transporter 2, ATP binding cassette subfamily B member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_021413462.1
SIO_010081: TAP2
subclass of: SO_0000673
so part of: TAP2
location: join(51253..51370,51580..52279,52672..52802,52873..53078,53290..53487,53562..53690,53899..54261,54331..54490,54569..54705,54782..55091)
location: region:51253-55091:1
so has part: feature:51253-51370:1:exon
so has part: feature:51580-52279:1:exon
so has part: feature:52672-52802:1:exon
so has part: feature:52873-53078:1:exon
so has part: feature:53290-53487:1:exon
so has part: feature:53562-53690:1:exon
so has part: feature:53899-54261:1:exon
so has part: feature:54331-54490:1:exon
so has part: feature:54569-54705:1:exon
so has part: feature:54782-55091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51253-51370:1:exon

position:51370:1
position: 51370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51580-52279:1:exon

position:51580:1
position: 51580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52279:1
position: 52279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52672-52802:1:exon

position:52672:1
position: 52672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52802:1
position: 52802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52873-53078:1:exon

position:52873:1
position: 52873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53078:1
position: 53078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53290-53487:1:exon

position:53290:1
position: 53290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53487:1
position: 53487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:53562-53690:1:exon

position:53562:1
position: 53562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53690:1
position: 53690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:53899-54261:1:exon

position:53899:1
position: 53899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54261:1
position: 54261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:54331-54490:1:exon

position:54331:1
position: 54331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54490:1
position: 54490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:54569-54705:1:exon

position:54569:1
position: 54569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54705:1
position: 54705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:54782-55091:1:exon

position:54782:1
position: 54782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: TAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 2
translation: MPMPSHIPRLACTLLLADLALMLALAHFFPALAQLGRVGSWLEAGLRLLVLGGAGRLLAPRGPHGATVLLSLTPAVFLTLRDYLGLPGAAPVLLAAATPSWLVLTHGTAVVALLTWSLLVPTVAVGSKEAEAWVPLRRLLALAWPEWPFLGCAFLFLVLAALGETSVPYCTGRALDVLRRGDGLAAFTAAVGLMCLASASSSLFAGCRGGLFIFTKFRFILRTRDQLFSSLVYRDLTFFQKTRAAELASRLTTDVTLASSVLTLNINVMLRNLGQVLGLCAFMLGLSPRLTLLALLEVPLAIAVRKVYDTRHQLLQRAVLDAAANSGAAVQESISSIETVRVFNGEEEEEHRYNQALDKTLRLRDQRDTEKAIFFLIQRALQLAVQALVLYCGHQQLREGTLTAGGLVAFVLYQNNAGNCVQALAYSYGDLLSNAAAACKVFDYLDRERAVGTGGSYVPTTLRGHVAFRQVSFSYPTRPERLVLRDVTFELRPGKVTALAGLNGSGKSTCAALLERFYEPGAGEVLLDGVPLRDYEHRYLHRQVALVGQEPVLFSGSIRDNIAYGMEDCEEEEIVAAARAAGALGFISELEQGFDTDVGERGGQLSAGQKQRIAIARALVRRPTVLILDEATSALDGDGDAVLQQWVRNGGDRTVLLITHQPRMLEKADRVVVLEQGTVAETGTPGELRTRGGPYSRLLQR
SIO_010081: TAP2
subclass of: SO_0000673
so part of: TAP2
location: join(51678..52279,52672..52802,52873..53078,53290..53487,53562..53690,53899..54261,54331..54490,54569..54705,54782..54961)
location: region:51678-54961:1
so has part: feature:51678-52279:1:exon
so has part: feature:52672-52802:1:exon
so has part: feature:52873-53078:1:exon
so has part: feature:53290-53487:1:exon
so has part: feature:53562-53690:1:exon
so has part: feature:53899-54261:1:exon
so has part: feature:54331-54490:1:exon
so has part: feature:54569-54705:1:exon
so has part: feature:54782-54961:1:exon

XP_021269137.1
type: Protein
SIO_000068: ncbiprotein

position:51678:1
position: 51678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54961:1
position: 54961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51678-52279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52672-52802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52873-53078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53290-53487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53562-53690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53899-54261:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:54331-54490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54569-54705:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54782-54961:1:exon

LOC110406700
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57209..57892)
location: region:57209-57892:-1
so has part: feature:57209-57892:-1:exon
subclass of: SO_0000011

110406700
type: Gene
SIO_000068: ncbigene

position:57209:-1
position: 57209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57892:-1
position: 57892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57209-57892:-1:exon

LOC110406700
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8996
nc RNA class: lncRNA
gene: LOC110406700
product: uncharacterized LOC110406700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XR_002443548.1
SIO_010081: LOC110406700
subclass of: SO_0000673
so part of: LOC110406700
location: complement(join(57209..57241,57382..57414,57699..57803,57876..57892))
location: region:57209-57892:-1
so has part: feature:57876-57892:-1:exon
so has part: feature:57699-57803:-1:exon
so has part: feature:57382-57414:-1:exon
so has part: feature:57209-57241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57876-57892:-1:exon

position:57876:-1
position: 57876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57699-57803:-1:exon

position:57699:-1
position: 57699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57803:-1
position: 57803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57382-57414:-1:exon

position:57382:-1
position: 57382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57414:-1
position: 57414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57209-57241:-1:exon

position:57241:-1
position: 57241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406689
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(60059..62862)
location: region:60059-62862:-1
so has part: feature:60059-62862:-1:exon
subclass of: SO_0000010

110406689
type: Gene
SIO_000068: ncbigene

position:60059:-1
position: 60059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62862:-1
position: 62862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60059-62862:-1:exon

LOC110406689
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406689
product: HLA class II histocompatibility antigen, DM beta chain-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_021413508.1
SIO_010081: LOC110406689
subclass of: SO_0000673
so part of: LOC110406689
location: complement(join(60059..60157,60235..60270,60597..60716,60791..61075,61866..62862))
location: region:60059-62862:-1
so has part: feature:61866-62862:-1:exon
so has part: feature:60791-61075:-1:exon
so has part: feature:60597-60716:-1:exon
so has part: feature:60235-60270:-1:exon
so has part: feature:60059-60157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61866-62862:-1:exon

position:61866:-1
position: 61866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60791-61075:-1:exon

position:60791:-1
position: 60791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61075:-1
position: 61075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60597-60716:-1:exon

position:60597:-1
position: 60597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60716:-1
position: 60716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60235-60270:-1:exon

position:60235:-1
position: 60235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60270:-1
position: 60270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:60059-60157:-1:exon

position:60157:-1
position: 60157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406689
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406689
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DM beta chain-like
translation: MGSLPALPSPHCPPDAGAFMVHVASSCPLAANGSLLGFDLTVTFNKNPLVCYDPDGRRFTACDWGLLHKISGQIAIALNNGTTWVQRAEARRQACSKLAARFWAHTALRRTQPQVRIVSAQTGNPSVPIRLTCHVWGFYPPEVTIIWLHNGDIMGPGDHSPVSAIPNGNWTYQTQAAISVAPEVGDTYTCSVQHASLEEPLLEDWRPGLTLEVTLMVAVATVVMVLGLSLLITGAYRWRAQPPAPGYAPLPGHSYPSGSI
SIO_010081: LOC110406689
subclass of: SO_0000673
so part of: LOC110406689
location: complement(join(60147..60157,60235..60270,60597..60716,60791..61075,61866..62197))
location: region:60147-62197:-1
so has part: feature:61866-62197:-1:exon
so has part: feature:60791-61075:-1:exon
so has part: feature:60597-60716:-1:exon
so has part: feature:60235-60270:-1:exon
so has part: feature:60147-60157:-1:exon

XP_021269183.1
type: Protein
SIO_000068: ncbiprotein

position:60147:-1
position: 60147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62197:-1
position: 62197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61866-62197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60791-61075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60597-60716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60235-60270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60147-60157:-1:exon

LOC110406684
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62065..65391)
location: region:62065-65391:-1
so has part: feature:62065-65391:-1:exon
subclass of: SO_0000010

110406684
type: Gene
SIO_000068: ncbigene

position:62065:-1
position: 62065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65391:-1
position: 65391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62065-65391:-1:exon

LOC110406684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406684
product: HLA class II histocompatibility antigen, DM beta chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_021413502.1
SIO_010081: LOC110406684
subclass of: SO_0000673
so part of: LOC110406684
location: complement(join(62065..62147,62925..63765,63843..64118,65293..65391))
location: region:62065-65391:-1
so has part: feature:65293-65391:-1:exon
so has part: feature:63843-64118:-1:exon
so has part: feature:62925-63765:-1:exon
so has part: feature:62065-62147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65293-65391:-1:exon

position:65293:-1
position: 65293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63843-64118:-1:exon

position:63843:-1
position: 63843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64118:-1
position: 64118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62925-63765:-1:exon

position:62925:-1
position: 62925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63765:-1
position: 63765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:62065-62147:-1:exon

position:62147:-1
position: 62147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406684
product: HLA class II histocompatibility antigen, DM beta chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_021413501.1
SIO_010081: LOC110406684
subclass of: SO_0000673
so part of: LOC110406684
location: complement(join(62065..62147,62925..63546,63646..63765,63843..64118,64496..64777,65293..65391))
location: region:62065-65391:-1
so has part: feature:65293-65391:-1:exon
so has part: feature:64496-64777:-1:exon
so has part: feature:63843-64118:-1:exon
so has part: feature:63646-63765:-1:exon
so has part: feature:62925-63546:-1:exon
so has part: feature:62065-62147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65293-65391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64496-64777:-1:exon

position:64496:-1
position: 64496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64777:-1
position: 64777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63843-64118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63646-63765:-1:exon

position:63646:-1
position: 63646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62925-63546:-1:exon

position:63546:-1
position: 63546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62065-62147:-1:exon

LOC110406684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406684
product: HLA class II histocompatibility antigen, DM beta chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_021413500.1
SIO_010081: LOC110406684
subclass of: SO_0000673
so part of: LOC110406684
location: complement(join(62065..62147,62925..63765,63843..64118,64496..64777,65293..65391))
location: region:62065-65391:-1
so has part: feature:65293-65391:-1:exon
so has part: feature:64496-64777:-1:exon
so has part: feature:63843-64118:-1:exon
so has part: feature:62925-63765:-1:exon
so has part: feature:62065-62147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65293-65391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64496-64777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63843-64118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62925-63765:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62065-62147:-1:exon

LOC110406684
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 8-like isoform X3
translation: MEGTKAAMLPMGPTGLRVLGAVGLVLSCKAAAPPQVRIVPIPVPNDPDTVRLTCHVWGFYPPTVTIQWLHNGLVVASGDTKLLPSGDWTYQTQVALRASTAAGNTYTCSVGHASLEQPLQEHWSPSLSPGMTVKVAVAAMALTLGLVALSAGIFSFCHRPRARGEGWGRFGGDACDTEDLVSSVGCPSSFIIFCVAGPGAGPGPHPDAGSDSSPGPQTDPGPSSGPHPSPSPHPSPGPHSGPGPGSASGSHP
SIO_010081: LOC110406684
subclass of: SO_0000673
so part of: LOC110406684
location: complement(join(63377..63765,63843..64118,65293..65386))
location: region:63377-65386:-1
so has part: feature:65293-65386:-1:exon
so has part: feature:63843-64118:-1:exon
so has part: feature:63377-63765:-1:exon

XP_021269177.1
type: Protein
SIO_000068: ncbiprotein

position:63377:-1
position: 63377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65386:-1
position: 65386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65293-65386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63843-64118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63377-63765:-1:exon

LOC110406684
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain-like isoform X2
translation: MEGTKAAMLPMGPTGLRVLGAVGLVLSCKAAGAFVMHVASSCPLVANGSLGGFDLTVAFNKNPLLCYDPDGRRFTACDWGLLHNIATWLAAILNNEIIWVQRAEARRRVCSELAAQFWAHTALRRTPPQVRIVPIPVPNDPDTVRLTCHVWGFYPPTVTIQWLHNGLVVASGDTKLLPSGDWTYQTQVALRASTAAGNTYTCSVGHASLEQPLQEHWSPSLSPGMTVKVAVAAMALTLGLVALSAGIFSFCHRPRARGPGAGPGPHPDAGSDSSPGPQTDPGPSSGPHPSPSPHPSPGPHSGPGPGSASGSHP
SIO_010081: LOC110406684
subclass of: SO_0000673
so part of: LOC110406684
location: complement(join(63377..63546,63646..63765,63843..64118,64496..64777,65293..65386))
location: region:63377-65386:-1
so has part: feature:65293-65386:-1:exon
so has part: feature:64496-64777:-1:exon
so has part: feature:63843-64118:-1:exon
so has part: feature:63646-63765:-1:exon
so has part: feature:63377-63546:-1:exon

XP_021269176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65293-65386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64496-64777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63843-64118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63646-63765:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63377-63546:-1:exon

LOC110406684
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain-like isoform X1
translation: MEGTKAAMLPMGPTGLRVLGAVGLVLSCKAAGAFVMHVASSCPLVANGSLGGFDLTVAFNKNPLLCYDPDGRRFTACDWGLLHNIATWLAAILNNEIIWVQRAEARRRVCSELAAQFWAHTALRRTPPQVRIVPIPVPNDPDTVRLTCHVWGFYPPTVTIQWLHNGLVVASGDTKLLPSGDWTYQTQVALRASTAAGNTYTCSVGHASLEQPLQEHWSPSLSPGMTVKVAVAAMALTLGLVALSAGIFSFCHRPRARGEGWGRFGGDACDTEDLVSSVGCPSSFIIFCVAGPGAGPGPHPDAGSDSSPGPQTDPGPSSGPHPSPSPHPSPGPHSGPGPGSASGSHP
SIO_010081: LOC110406684
subclass of: SO_0000673
so part of: LOC110406684
location: complement(join(63377..63765,63843..64118,64496..64777,65293..65386))
location: region:63377-65386:-1
so has part: feature:65293-65386:-1:exon
so has part: feature:64496-64777:-1:exon
so has part: feature:63843-64118:-1:exon
so has part: feature:63377-63765:-1:exon

XP_021269175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65293-65386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64496-64777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63843-64118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63377-63765:-1:exon

LOC110406691
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(65527..68077)
location: region:65527-68077:-1
so has part: feature:65527-68077:-1:exon
subclass of: SO_0000010

110406691
type: Gene
SIO_000068: ncbigene

position:65527:-1
position: 65527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68077:-1
position: 68077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65527-68077:-1:exon

LOC110406691
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406691
product: class II histocompatibility antigen, M alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_021413510.1
SIO_010081: LOC110406691
subclass of: SO_0000673
so part of: LOC110406691
location: complement(join(65527..65584,65656..65775,65897..66178,66557..66823,67522..68077))
location: region:65527-68077:-1
so has part: feature:67522-68077:-1:exon
so has part: feature:66557-66823:-1:exon
so has part: feature:65897-66178:-1:exon
so has part: feature:65656-65775:-1:exon
so has part: feature:65527-65584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67522-68077:-1:exon

position:67522:-1
position: 67522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66557-66823:-1:exon

position:66557:-1
position: 66557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66823:-1
position: 66823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65897-66178:-1:exon

position:65897:-1
position: 65897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66178:-1
position: 66178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65656-65775:-1:exon

position:65656:-1
position: 65656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65775:-1
position: 65775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:65527-65584:-1:exon

position:65584:-1
position: 65584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406691
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, M alpha chain-like
translation: MGAASGRGALVAALLGAALGSVRAEPSPHTLAEVLFCQPDTPSQGLAVAFDAEQLFSFDFPSSQWLPRLPDGPAWPADTEQPHELQHDAALCRDLRDLLTKIATGPLPMPEAKGIPVADVFLQQPLQLGHPNTLICMVGNIFPPAITISWQRNSIPVTDGVTHVTYTPTEDLAFMRFSYLAVTPRSGDIYACIVTRERDNISVVAYWVPQDPVPTDTLATAVCGAVTALGILLALLGLGLLVSSCRRG
SIO_010081: LOC110406691
subclass of: SO_0000673
so part of: LOC110406691
location: complement(join(65580..65584,65656..65775,65897..66178,66557..66823,67522..67594))
location: region:65580-67594:-1
so has part: feature:67522-67594:-1:exon
so has part: feature:66557-66823:-1:exon
so has part: feature:65897-66178:-1:exon
so has part: feature:65656-65775:-1:exon
so has part: feature:65580-65584:-1:exon

XP_021269185.1
type: Protein
SIO_000068: ncbiprotein

position:65580:-1
position: 65580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67594:-1
position: 67594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67522-67594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66557-66823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65897-66178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65656-65775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65580-65584:-1:exon

BRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 71388..77544
location: region:71388-77544:1
so has part: feature:71388-77544:1:exon
subclass of: SO_0000010

110406668
type: Gene
SIO_000068: ncbigene

position:71388:1
position: 71388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77544:1
position: 77544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71388-77544:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: BRD2
product: bromodomain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_021413460.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(71388..71519,73579..73879,74716..74853,74930..75071,75154..75362,75451..75822,75924..76052,76126..76380,76459..76661,76753..77063,77143..77265,77336..77544)
location: region:71388-77544:1
so has part: feature:71388-71519:1:exon
so has part: feature:73579-73879:1:exon
so has part: feature:74716-74853:1:exon
so has part: feature:74930-75071:1:exon
so has part: feature:75154-75362:1:exon
so has part: feature:75451-75822:1:exon
so has part: feature:75924-76052:1:exon
so has part: feature:76126-76380:1:exon
so has part: feature:76459-76661:1:exon
so has part: feature:76753-77063:1:exon
so has part: feature:77143-77265:1:exon
so has part: feature:77336-77544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71388-71519:1:exon

position:71519:1
position: 71519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73579-73879:1:exon

position:73579:1
position: 73579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73879:1
position: 73879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74716-74853:1:exon

position:74716:1
position: 74716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74853:1
position: 74853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74930-75071:1:exon

position:74930:1
position: 74930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75071:1
position: 75071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:75154-75362:1:exon

position:75154:1
position: 75154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75362:1
position: 75362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75451-75822:1:exon

position:75451:1
position: 75451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75822:1
position: 75822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:75924-76052:1:exon

position:75924:1
position: 75924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76052:1
position: 76052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:76126-76380:1:exon

position:76126:1
position: 76126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76380:1
position: 76380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:76459-76661:1:exon

position:76459:1
position: 76459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76661:1
position: 76661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:76753-77063:1:exon

position:76753:1
position: 76753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77063:1
position: 77063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:77143-77265:1:exon

position:77143:1
position: 77143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77265:1
position: 77265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:77336-77544:1:exon

position:77336:1
position: 77336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: BRD2
product: bromodomain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_021413461.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(71388..71519,73579..73879,74716..74853,74930..75071,75154..75362,75451..75822,75924..76052,76126..76380,76498..76661,76753..77063,77143..77265,77336..77544)
location: region:71388-77544:1
so has part: feature:71388-71519:1:exon
so has part: feature:73579-73879:1:exon
so has part: feature:74716-74853:1:exon
so has part: feature:74930-75071:1:exon
so has part: feature:75154-75362:1:exon
so has part: feature:75451-75822:1:exon
so has part: feature:75924-76052:1:exon
so has part: feature:76126-76380:1:exon
so has part: feature:76498-76661:1:exon
so has part: feature:76753-77063:1:exon
so has part: feature:77143-77265:1:exon
so has part: feature:77336-77544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71388-71519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73579-73879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74716-74853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74930-75071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75154-75362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75451-75822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75924-76052:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76126-76380:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76498-76661:1:exon

position:76498:1
position: 76498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:76753-77063:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77143-77265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77336-77544:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X1
translation: MLQNVNPQNKILGEGNAGLMGLATESTPGKRIRKPSLLYEGFESPTMASVPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHTAVYTPSPDIATTIVNIPHPSVISAPLLKSLHSAAPAVLAAPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLLGALSKSSSEESSSDEDDEDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQLRAVHEQLAALSQGPVSKPKKKREKKKKKKSEKHKGRGGDEESRARQAQLRKAKKGGGGGAGGGGSSKNSKKAAKAALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSAKKPPKKANEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(71491..71519,73579..73879,74716..74853,74930..75071,75154..75362,75451..75822,75924..76052,76126..76380,76459..76661,76753..77063,77143..77265,77336..77466)
location: region:71491-77466:1
so has part: feature:71491-71519:1:exon
so has part: feature:73579-73879:1:exon
so has part: feature:74716-74853:1:exon
so has part: feature:74930-75071:1:exon
so has part: feature:75154-75362:1:exon
so has part: feature:75451-75822:1:exon
so has part: feature:75924-76052:1:exon
so has part: feature:76126-76380:1:exon
so has part: feature:76459-76661:1:exon
so has part: feature:76753-77063:1:exon
so has part: feature:77143-77265:1:exon
so has part: feature:77336-77466:1:exon

XP_021269135.1
type: Protein
SIO_000068: ncbiprotein

position:71491:1
position: 71491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77466:1
position: 77466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71491-71519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73579-73879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74716-74853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74930-75071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75154-75362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75451-75822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75924-76052:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76126-76380:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76459-76661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76753-77063:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77143-77265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77336-77466:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X2
translation: MLQNVNPQNKILGEGNAGLMGLATESTPGKRIRKPSLLYEGFESPTMASVPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQEIVVPVAKNSHKKGASRAAALLAGLTAAQQVPAVSSVSHTAVYTPSPDIATTIVNIPHPSVISAPLLKSLHSAAPAVLAAPAPTQPVAKKKGVKRKADTTTPTTTAIIATSGESSPSATLLEAKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQDASPPSVSAPLLGALSKSSSEESSSDEDDEDEDDEDDDEDESSSESSSESEESSDSEEERANRLAELQEQGPVSKPKKKREKKKKKKSEKHKGRGGDEESRARQAQLRKAKKGGGGGAGGGGSSKNSKKAAKAALPPPPALYDSEEEEESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKKPVGKTKEELALEKKRELEKRLQDVSGQLNSAKKPPKKANEKPESAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(71491..71519,73579..73879,74716..74853,74930..75071,75154..75362,75451..75822,75924..76052,76126..76380,76498..76661,76753..77063,77143..77265,77336..77466)
location: region:71491-77466:1
so has part: feature:71491-71519:1:exon
so has part: feature:73579-73879:1:exon
so has part: feature:74716-74853:1:exon
so has part: feature:74930-75071:1:exon
so has part: feature:75154-75362:1:exon
so has part: feature:75451-75822:1:exon
so has part: feature:75924-76052:1:exon
so has part: feature:76126-76380:1:exon
so has part: feature:76498-76661:1:exon
so has part: feature:76753-77063:1:exon
so has part: feature:77143-77265:1:exon
so has part: feature:77336-77466:1:exon

XP_021269136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71491-71519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73579-73879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74716-74853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74930-75071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75154-75362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75451-75822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75924-76052:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76126-76380:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76498-76661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76753-77063:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77143-77265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77336-77466:1:exon

LOC110406660
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77812..80316)
location: region:77812-80316:-1
so has part: feature:77812-80316:-1:exon
subclass of: SO_0000010

110406660
type: Gene
SIO_000068: ncbigene

position:77812:-1
position: 77812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80316:-1
position: 80316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77812-80316:-1:exon

LOC110406660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406660
product: class II histocompatibility antigen, B-L beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 113 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021413450.1
SIO_010081: LOC110406660
subclass of: SO_0000673
so part of: LOC110406660
location: complement(join(77812..77856,79541..79611,79697..79966,80156..80316))
location: region:77812-80316:-1
so has part: feature:80156-80316:-1:exon
so has part: feature:79697-79966:-1:exon
so has part: feature:79541-79611:-1:exon
so has part: feature:77812-77856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80156-80316:-1:exon

position:80156:-1
position: 80156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79697-79966:-1:exon

position:79697:-1
position: 79697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79966:-1
position: 79966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79541-79611:-1:exon

position:79541:-1
position: 79541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79611:-1
position: 79611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77812-77856:-1:exon

position:77856:-1
position: 77856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, B-L beta chain-like
translation: MGSGRVPAAGAVLVALVALGARAAAGTRPSAFFLQASIGDCHFLNGSERVRLVQRYIYNRQQYTHYDSDVGKFVADTALGERQAEHYNSNTEYMEYLQGAVDTFCRHNYGVLESFTVQRRVEPKVRVSALQSGSAPQADRLACYGTGRGAPRWVVFLL
SIO_010081: LOC110406660
subclass of: SO_0000673
so part of: LOC110406660
location: complement(join(77812..77856,79541..79611,79697..79966,80156..80246))
location: region:77812-80246:-1
so has part: feature:80156-80246:-1:exon
so has part: feature:79697-79966:-1:exon
so has part: feature:79541-79611:-1:exon
so has part: feature:77812-77856:-1:exon

XP_021269125.1
type: Protein
SIO_000068: ncbiprotein

position:80246:-1
position: 80246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80156-80246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79697-79966:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79541-79611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77812-77856:-1:exon

TAPBP
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TAPBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 86020..89499
location: region:86020-89499:1
so has part: feature:86020-89499:1:exon
subclass of: SO_0000010

110406683
type: Gene
SIO_000068: ncbigene

position:86020:1
position: 86020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89499:1
position: 89499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86020-89499:1:exon

TAPBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: TAPBP
product: TAP binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_021413498.1
SIO_010081: TAPBP
subclass of: SO_0000673
so part of: TAPBP
location: join(86020..86127,86221..86430,87036..87275,87761..88105,88371..88709,89008..89097,89307..89332,89431..89499)
location: region:86020-89499:1
so has part: feature:86020-86127:1:exon
so has part: feature:86221-86430:1:exon
so has part: feature:87036-87275:1:exon
so has part: feature:87761-88105:1:exon
so has part: feature:88371-88709:1:exon
so has part: feature:89008-89097:1:exon
so has part: feature:89307-89332:1:exon
so has part: feature:89431-89499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86020-86127:1:exon

position:86127:1
position: 86127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86221-86430:1:exon

position:86221:1
position: 86221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86430:1
position: 86430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87036-87275:1:exon

position:87036:1
position: 87036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87275:1
position: 87275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87761-88105:1:exon

position:87761:1
position: 87761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88105:1
position: 88105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88371-88709:1:exon

position:88371:1
position: 88371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88709:1
position: 88709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:89008-89097:1:exon

position:89008:1
position: 89008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89097:1
position: 89097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:89307-89332:1:exon

position:89307:1
position: 89307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89332:1
position: 89332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89431-89499:1:exon

position:89431:1
position: 89431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAPBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: TAPBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tapasin
translation: MAAGLRLLLAGLCWSQFRVEDAAPSPSPPAPVRCELLEGGGRGGTLPGGGKARPALLRFGGDTGTPPEPGPEPEVTFNVSDPWGALTPLGVPPRAPPRCELNPTKPQTGSAPWSRPLHPDARSPTTAGGQWWLAAVGTPQYSVTALLQGEMGTEGATAAAVSLAVLTHTPTLRGRVGSPIHLHCAFAAPPSPFVLEWRHQSRGAGRVLLAYDSATARAPRATPGAELLLGTRDGDGVTAVTLRLAEPAPGDEGTYICSVFLPHGHAQTVLQLHVFEPPKVTLSPKNLVVAPGTSAELRCHVSGFYPLDVAVTWQRRSGGSRTSRSAGDTVVDTWTSGHRRAADGTYSRTAEARLVPARPQHHGDVYTCVVTHTALTKPMRVSVQLLLAGTEGPRLEDITGLFLVAFVLCGLICWLSPTAARPKEDTKKLQ
SIO_010081: TAPBP
subclass of: SO_0000673
so part of: TAPBP
location: join(86097..86127,86221..86430,87036..87275,87761..88105,88371..88709,89008..89097,89307..89332,89431..89442)
location: region:86097-89442:1
so has part: feature:86097-86127:1:exon
so has part: feature:86221-86430:1:exon
so has part: feature:87036-87275:1:exon
so has part: feature:87761-88105:1:exon
so has part: feature:88371-88709:1:exon
so has part: feature:89008-89097:1:exon
so has part: feature:89307-89332:1:exon
so has part: feature:89431-89442:1:exon

XP_021269173.1
type: Protein
SIO_000068: ncbiprotein

position:86097:1
position: 86097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89442:1
position: 89442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86097-86127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86221-86430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87036-87275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87761-88105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88371-88709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89008-89097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89307-89332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89431-89442:1:exon

LOC110406690
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <91184..91820
location: region:91184-91820:1
so has part: feature:91184-91820:1:exon
subclass of: SO_0000010

110406690
type: Gene
SIO_000068: ncbigene

position:91184:1
position: 91184
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:91820:1
position: 91820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91184-91820:1:exon

LOC110406690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406690
product: class II histocompatibility antigen, B-L beta chain-like
inference: similar to RNA sequence (same species):INSD:GBYG01019120.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 597 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_021413509.1
SIO_010081: LOC110406690
subclass of: SO_0000673
so part of: LOC110406690
location: join(<91184..91271,91366..91476,91569..91595,91669..91820)
location: region:91184-91820:1
so has part: feature:91184-91271:1:exon
so has part: feature:91366-91476:1:exon
so has part: feature:91569-91595:1:exon
so has part: feature:91669-91820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91184-91271:1:exon

position:91271:1
position: 91271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91366-91476:1:exon

position:91366:1
position: 91366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91476:1
position: 91476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91569-91595:1:exon

position:91569:1
position: 91569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91595:1
position: 91595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91669-91820:1:exon

position:91669:1
position: 91669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406690
inference: similar to RNA sequence (same species):INSD:GBYG01019120.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 555 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, B-L beta chain-like
translation: MGSGRVPAAGAVLVALVVLGARAAAGTRPSAFFLHSVISECHFMNDTERVRFVERHFYNRQHWLHFDSDVGKFVADTPLGESWAEYWNSNTEYLEYKRGQVDAYCRHNYGVLESFTVQRRVEPKVRVSALQSGSAPQADRLACYVTGFYPAEIEVKWFQNGREETERVVSTDVIQNGDWTYQVLVVLEGGPRRGDSYACQVEHASLRQPLVQRWEPPADAGRSKMLTGVGGFVLGLVFLALGLFLFLRSQKGRPVVAAAPGMLN
SIO_010081: LOC110406690
subclass of: SO_0000673
so part of: LOC110406690
location: join(<91184..91271,91366..91476,91569..91595,91669..91682)
location: region:91184-91682:1
so has part: feature:91184-91271:1:exon
so has part: feature:91366-91476:1:exon
so has part: feature:91569-91595:1:exon
so has part: feature:91669-91682:1:exon

XP_021269184.1
type: Protein
SIO_000068: ncbiprotein

position:91682:1
position: 91682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91184-91271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91366-91476:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91569-91595:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91669-91682:1:exon

LOC110406696
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(91849..94969)
location: region:91849-94969:-1
so has part: feature:91849-94969:-1:exon
subclass of: SO_0000010

110406696
type: Gene
SIO_000068: ncbigene

position:91849:-1
position: 91849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94969:-1
position: 94969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91849-94969:-1:exon

LOC110406696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406696
product: C-type lectin domain family 2 member B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021413518.1
SIO_010081: LOC110406696
subclass of: SO_0000673
so part of: LOC110406696
location: complement(join(91849..92307,92580..92686,93044..93216,93659..93757,94141..94217,94628..94969))
location: region:91849-94969:-1
so has part: feature:94628-94969:-1:exon
so has part: feature:94141-94217:-1:exon
so has part: feature:93659-93757:-1:exon
so has part: feature:93044-93216:-1:exon
so has part: feature:92580-92686:-1:exon
so has part: feature:91849-92307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94628-94969:-1:exon

position:94628:-1
position: 94628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94141-94217:-1:exon

position:94141:-1
position: 94141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94217:-1
position: 94217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93659-93757:-1:exon

position:93659:-1
position: 93659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93757:-1
position: 93757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93044-93216:-1:exon

position:93044:-1
position: 93044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93216:-1
position: 93216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92580-92686:-1:exon

position:92580:-1
position: 92580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92686:-1
position: 92686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91849-92307:-1:exon

position:92307:-1
position: 92307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like
translation: MKETREYPDFLGTEWSRRAGSSLEVKRGACITGQLAMAAVFLVLLVTAVAFAVQAFQPRPQPCAQCPFDWIGFRGKCYYFSEDESNWTSSQNNCSALGASLAVFDSAEDLSFAMRHKGSSPHWVGLSREGEEHPWEWENRSPSPHLFQVQGSGLCAYLGDAGLSSSCCSTQRNWVCTKPAAKSPRKNFCIRT
SIO_010081: LOC110406696
subclass of: SO_0000673
so part of: LOC110406696
location: complement(join(92166..92307,92580..92686,93044..93216,93659..93757,94141..94198))
location: region:92166-94198:-1
so has part: feature:94141-94198:-1:exon
so has part: feature:93659-93757:-1:exon
so has part: feature:93044-93216:-1:exon
so has part: feature:92580-92686:-1:exon
so has part: feature:92166-92307:-1:exon

XP_021269193.1
type: Protein
SIO_000068: ncbiprotein

position:92166:-1
position: 92166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94198:-1
position: 94198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94141-94198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93659-93757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93044-93216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92580-92686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92166-92307:-1:exon

LOC110406694
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95144..99224
location: region:95144-99224:1
so has part: feature:95144-99224:1:exon
subclass of: SO_0000010

110406694
type: Gene
SIO_000068: ncbigene

position:95144:1
position: 95144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99224:1
position: 99224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95144-99224:1:exon

LOC110406694
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406694
product: killer cell lectin-like receptor subfamily B member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021413516.1
SIO_010081: LOC110406694
subclass of: SO_0000673
so part of: LOC110406694
location: join(95144..95277,95906..96279,97417..97551,97627..97781,98319..98428,98502..99224)
location: region:95144-99224:1
so has part: feature:95144-95277:1:exon
so has part: feature:95906-96279:1:exon
so has part: feature:97417-97551:1:exon
so has part: feature:97627-97781:1:exon
so has part: feature:98319-98428:1:exon
so has part: feature:98502-99224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95144-95277:1:exon

position:95277:1
position: 95277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95906-96279:1:exon

position:95906:1
position: 95906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96279:1
position: 96279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97417-97551:1:exon

position:97417:1
position: 97417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97551:1
position: 97551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97627-97781:1:exon

position:97627:1
position: 97627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97781:1
position: 97781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98319-98428:1:exon

position:98319:1
position: 98319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98428:1
position: 98428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:98502-99224:1:exon

position:98502:1
position: 98502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406694
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406694
product: killer cell lectin-like receptor subfamily B member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021413515.1
SIO_010081: LOC110406694
subclass of: SO_0000673
so part of: LOC110406694
location: join(95144..95277,95906..96279,96989..97072,97417..97551,97627..97781,98319..98428,98502..99222)
location: region:95144-99222:1
so has part: feature:95144-95277:1:exon
so has part: feature:95906-96279:1:exon
so has part: feature:96989-97072:1:exon
so has part: feature:97417-97551:1:exon
so has part: feature:97627-97781:1:exon
so has part: feature:98319-98428:1:exon
so has part: feature:98502-99222:1:exon

position:99222:1
position: 99222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95144-95277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95906-96279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96989-97072:1:exon

position:96989:1
position: 96989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97072:1
position: 97072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97417-97551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97627-97781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98319-98428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98502-99222:1:exon

LOC110406694
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily B member 1 isoform X1
translation: MDGEITYADLRHPRGGLSPAKRQHVPSVFLKASVLGVMVVVVVLLLVGLSICVFQKTARPACAPQLCPETRGRKGTELSDSTSIEEYFCQSTRNSSAAPAACLLCPLFWKLLGDRCYRLSKEKGNWTRAREECENEQSQLVVLRDKAEQDYLQEVAGAEVQPVWIGLKASEKEWQWVDGSSFNTTVFGQLRVKHNHCGTFKNPKVEDDACTGEHQWICQKEPLPLHP
SIO_010081: LOC110406694
subclass of: SO_0000673
so part of: LOC110406694
location: join(96207..96279,96989..97072,97417..97551,97627..97781,98319..98428,98502..98628)
location: region:96207-98628:1
so has part: feature:96207-96279:1:exon
so has part: feature:96989-97072:1:exon
so has part: feature:97417-97551:1:exon
so has part: feature:97627-97781:1:exon
so has part: feature:98319-98428:1:exon
so has part: feature:98502-98628:1:exon

XP_021269190.1
type: Protein
SIO_000068: ncbiprotein

position:96207:1
position: 96207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98628:1
position: 98628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96207-96279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96989-97072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97417-97551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97627-97781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98319-98428:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98502-98628:1:exon

LOC110406694
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily B member 1 isoform X2
translation: MDGEITYADLRHPRGGLSPAKRQHVFQKTARPACAPQLCPETRGRKGTELSDSTSIEEYFCQSTRNSSAAPAACLLCPLFWKLLGDRCYRLSKEKGNWTRAREECENEQSQLVVLRDKAEQDYLQEVAGAEVQPVWIGLKASEKEWQWVDGSSFNTTVFGQLRVKHNHCGTFKNPKVEDDACTGEHQWICQKEPLPLHP
SIO_010081: LOC110406694
subclass of: SO_0000673
so part of: LOC110406694
location: join(96207..96279,97417..97551,97627..97781,98319..98428,98502..98628)
location: region:96207-98628:1
so has part: feature:96207-96279:1:exon
so has part: feature:97417-97551:1:exon
so has part: feature:97627-97781:1:exon
so has part: feature:98319-98428:1:exon
so has part: feature:98502-98628:1:exon

XP_021269191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96207-96279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97417-97551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97627-97781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98319-98428:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98502-98628:1:exon

LOC110406693
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99969..104161)
location: region:99969-104161:-1
so has part: feature:99969-104161:-1:exon
subclass of: SO_0000010

110406693
type: Gene
SIO_000068: ncbigene

position:99969:-1
position: 99969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104161:-1
position: 104161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99969-104161:-1:exon

LOC110406693
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406693
product: killer cell lectin-like receptor subfamily B member 1F, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021413514.1
SIO_010081: LOC110406693
subclass of: SO_0000673
so part of: LOC110406693
location: complement(join(99969..100317,100391..100500,101038..101192,101269..101403,101748..101846,102650..104161))
location: region:99969-104161:-1
so has part: feature:102650-104161:-1:exon
so has part: feature:101748-101846:-1:exon
so has part: feature:101269-101403:-1:exon
so has part: feature:101038-101192:-1:exon
so has part: feature:100391-100500:-1:exon
so has part: feature:99969-100317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102650-104161:-1:exon

position:102650:-1
position: 102650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101748-101846:-1:exon

position:101748:-1
position: 101748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101846:-1
position: 101846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101269-101403:-1:exon

position:101269:-1
position: 101269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101403:-1
position: 101403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101038-101192:-1:exon

position:101038:-1
position: 101038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101192:-1
position: 101192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100391-100500:-1:exon

position:100391:-1
position: 100391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100500:-1
position: 100500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:99969-100317:-1:exon

position:100317:-1
position: 100317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406693
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406693
product: killer cell lectin-like receptor subfamily B member 1F, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021413513.1
SIO_010081: LOC110406693
subclass of: SO_0000673
so part of: LOC110406693
location: complement(join(99969..100317,100391..100500,101038..101192,101269..101403,101748..101861,102650..104158))
location: region:99969-104158:-1
so has part: feature:102650-104158:-1:exon
so has part: feature:101748-101861:-1:exon
so has part: feature:101269-101403:-1:exon
so has part: feature:101038-101192:-1:exon
so has part: feature:100391-100500:-1:exon
so has part: feature:99969-100317:-1:exon

position:104158:-1
position: 104158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102650-104158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101748-101861:-1:exon

position:101861:-1
position: 101861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101269-101403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101038-101192:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100391-100500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99969-100317:-1:exon

LOC110406693
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily B member 1F isoform X2
translation: MDGEIINADLRHPTGSLSPAKRQHAAVVCPHWHQILLKASVLELLLLLLLLVGFSVCVFQKTARPASAPQLCPETRGRKGTELSDSTSIEEYFCQSTRNSSAAPAACLLCPLFWKLLGDRCYRLSTEKGIWTRAREECENEQSQLVVLRDKAEQDYLQEIAGPEVQPVWLGLKASKKEWQWVDGSSFSTAVFGQLPAMHNHCGTFKNTRLEEDICTGEHQWICQKEPLRLHP
SIO_010081: LOC110406693
subclass of: SO_0000673
so part of: LOC110406693
location: complement(join(100191..100317,100391..100500,101038..101192,101269..101403,101748..101846,102650..102722))
location: region:100191-102722:-1
so has part: feature:102650-102722:-1:exon
so has part: feature:101748-101846:-1:exon
so has part: feature:101269-101403:-1:exon
so has part: feature:101038-101192:-1:exon
so has part: feature:100391-100500:-1:exon
so has part: feature:100191-100317:-1:exon

XP_021269189.1
type: Protein
SIO_000068: ncbiprotein

position:100191:-1
position: 100191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102722:-1
position: 102722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102650-102722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101748-101846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101269-101403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101038-101192:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100391-100500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100191-100317:-1:exon

LOC110406693
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily B member 1F isoform X1
translation: MDGEIINADLRHPTGSLSPAKRQHVWTPPAAVVCPHWHQILLKASVLELLLLLLLLVGFSVCVFQKTARPASAPQLCPETRGRKGTELSDSTSIEEYFCQSTRNSSAAPAACLLCPLFWKLLGDRCYRLSTEKGIWTRAREECENEQSQLVVLRDKAEQDYLQEIAGPEVQPVWLGLKASKKEWQWVDGSSFSTAVFGQLPAMHNHCGTFKNTRLEEDICTGEHQWICQKEPLRLHP
SIO_010081: LOC110406693
subclass of: SO_0000673
so part of: LOC110406693
location: complement(join(100191..100317,100391..100500,101038..101192,101269..101403,101748..101861,102650..102722))
location: region:100191-102722:-1
so has part: feature:102650-102722:-1:exon
so has part: feature:101748-101861:-1:exon
so has part: feature:101269-101403:-1:exon
so has part: feature:101038-101192:-1:exon
so has part: feature:100391-100500:-1:exon
so has part: feature:100191-100317:-1:exon

XP_021269188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102650-102722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101748-101861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101269-101403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101038-101192:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100391-100500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100191-100317:-1:exon

LOC110406661
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 104745..117079
location: region:104745-117079:1
so has part: feature:104745-117079:1:exon
subclass of: SO_0000010

110406661
type: Gene
SIO_000068: ncbigene

position:104745:1
position: 104745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117079:1
position: 117079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104745-117079:1:exon

LOC110406661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406661
product: butyrophilin subfamily 3 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413451.1
SIO_010081: LOC110406661
subclass of: SO_0000673
so part of: LOC110406661
location: join(104745..105423,105851..105955,106272..106292,106781..106801,107058..107074,107305..107325,107684..107704,107807..107827,107937..107957,108062..108082,108180..108200,108545..108565,108909..108929,109155..109298,109408..109428,109543..109563,109789..109809,110158..110178,110346..110436,114772..114792,115127..115147,115637..115657,115753..115773,115876..115896,115995..116015,116113..116133,116265..116297,116378..117079)
location: region:104745-117079:1
so has part: feature:104745-105423:1:exon
so has part: feature:105851-105955:1:exon
so has part: feature:106272-106292:1:exon
so has part: feature:106781-106801:1:exon
so has part: feature:107058-107074:1:exon
so has part: feature:107305-107325:1:exon
so has part: feature:107684-107704:1:exon
so has part: feature:107807-107827:1:exon
so has part: feature:107937-107957:1:exon
so has part: feature:108062-108082:1:exon
so has part: feature:108180-108200:1:exon
so has part: feature:108545-108565:1:exon
so has part: feature:108909-108929:1:exon
so has part: feature:109155-109298:1:exon
so has part: feature:109408-109428:1:exon
so has part: feature:109543-109563:1:exon
so has part: feature:109789-109809:1:exon
so has part: feature:110158-110178:1:exon
so has part: feature:110346-110436:1:exon
so has part: feature:114772-114792:1:exon
so has part: feature:115127-115147:1:exon
so has part: feature:115637-115657:1:exon
so has part: feature:115753-115773:1:exon
so has part: feature:115876-115896:1:exon
so has part: feature:115995-116015:1:exon
so has part: feature:116113-116133:1:exon
so has part: feature:116265-116297:1:exon
so has part: feature:116378-117079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104745-105423:1:exon

position:105423:1
position: 105423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105851-105955:1:exon

position:105851:1
position: 105851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105955:1
position: 105955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106272-106292:1:exon

position:106272:1
position: 106272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106292:1
position: 106292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106781-106801:1:exon

position:106781:1
position: 106781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106801:1
position: 106801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107058-107074:1:exon

position:107058:1
position: 107058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107074:1
position: 107074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107305-107325:1:exon

position:107305:1
position: 107305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107325:1
position: 107325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:107684-107704:1:exon

position:107684:1
position: 107684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107704:1
position: 107704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107807-107827:1:exon

position:107807:1
position: 107807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107827:1
position: 107827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:107937-107957:1:exon

position:107937:1
position: 107937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107957:1
position: 107957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:108062-108082:1:exon

position:108062:1
position: 108062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108082:1
position: 108082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:108180-108200:1:exon

position:108180:1
position: 108180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108200:1
position: 108200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:108545-108565:1:exon

position:108545:1
position: 108545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108565:1
position: 108565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:108909-108929:1:exon

position:108909:1
position: 108909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108929:1
position: 108929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:109155-109298:1:exon

position:109155:1
position: 109155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109298:1
position: 109298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:109408-109428:1:exon

position:109408:1
position: 109408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109428:1
position: 109428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:109543-109563:1:exon

position:109543:1
position: 109543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109563:1
position: 109563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:109789-109809:1:exon

position:109789:1
position: 109789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109809:1
position: 109809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:110158-110178:1:exon

position:110158:1
position: 110158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110178:1
position: 110178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:110346-110436:1:exon

position:110346:1
position: 110346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110436:1
position: 110436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:114772-114792:1:exon

position:114772:1
position: 114772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114792:1
position: 114792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:115127-115147:1:exon

position:115127:1
position: 115127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115147:1
position: 115147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:115637-115657:1:exon

position:115637:1
position: 115637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115657:1
position: 115657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:115753-115773:1:exon

position:115753:1
position: 115753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115773:1
position: 115773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:115876-115896:1:exon

position:115876:1
position: 115876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115896:1
position: 115896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:115995-116015:1:exon

position:115995:1
position: 115995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116015:1
position: 116015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:116113-116133:1:exon

position:116113:1
position: 116113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116133:1
position: 116133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:116265-116297:1:exon

position:116265:1
position: 116265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116297:1
position: 116297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:116378-117079:1:exon

position:116378:1
position: 116378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A1-like
translation: MKCVVLGKISVSSSPPPHVVSGFPHPRILPHSLLLPLQLLHMGCSAHHLPLCHPMPPHEHRHHFTISLCPSHCTAQLTVVAPSLPVTANVGQDVVLRCHLSPCKDARSSDIRWSQHRTAELVHHYQKGVDLEQMEEYKGRTELLRNGLSDGNLELRITAVSSSDSGLYSCAVQDFDGYAEAVVKLEVSDPFSPITHSWAAALAVVVTLLLGSFVIIVFLHRKQVAQSRELSLSAADLMEQTEARNTMKIRGYTVYGWVDGMQSWRHYLQNWWIKLKHWRSELKYWRNAVKRWRNKLKNWRYGIKIGVSLLSEIDNVGVFLWELWDEMFLSSRIVSAFPWQREGMRSWKKKLQNRWNKLKTRTNTMKRWWNKLKNWELIALDTNTAITGSQQGNPQREQEEAEFALMEQVAEMEKKDEMLERKNAMMKEQAAEIMTKDTKLVEQAGKLVEQGAQLAWRKFLLPQNTVKVTLDPRTANPLLFISEDLRSVRWERNWQHLPNLQERFDTMCCVLGREEFREGRHCWEVEVIRQQGKYSWCALGVARASVKRKGEMVLSPEEGIWALQYDEGKLKALTAPPTPLTLSPVPTRVWVFLDCAQGQVTFINALNGVEIFAFPSASFNGEKVHAWFWLGTSAQLRLRDSTP
SIO_010081: LOC110406661
subclass of: SO_0000673
so part of: LOC110406661
location: join(104859..105423,105851..105955,106272..106292,106781..106801,107058..107074,107305..107325,107684..107704,107807..107827,107937..107957,108062..108082,108180..108200,108545..108565,108909..108929,109155..109298,109408..109428,109543..109563,109789..109809,110158..110178,110346..110436,114772..114792,115127..115147,115637..115657,115753..115773,115876..115896,115995..116015,116113..116133,116265..116297,116378..116913)
location: region:104859-116913:1
so has part: feature:104859-105423:1:exon
so has part: feature:105851-105955:1:exon
so has part: feature:106272-106292:1:exon
so has part: feature:106781-106801:1:exon
so has part: feature:107058-107074:1:exon
so has part: feature:107305-107325:1:exon
so has part: feature:107684-107704:1:exon
so has part: feature:107807-107827:1:exon
so has part: feature:107937-107957:1:exon
so has part: feature:108062-108082:1:exon
so has part: feature:108180-108200:1:exon
so has part: feature:108545-108565:1:exon
so has part: feature:108909-108929:1:exon
so has part: feature:109155-109298:1:exon
so has part: feature:109408-109428:1:exon
so has part: feature:109543-109563:1:exon
so has part: feature:109789-109809:1:exon
so has part: feature:110158-110178:1:exon
so has part: feature:110346-110436:1:exon
so has part: feature:114772-114792:1:exon
so has part: feature:115127-115147:1:exon
so has part: feature:115637-115657:1:exon
so has part: feature:115753-115773:1:exon
so has part: feature:115876-115896:1:exon
so has part: feature:115995-116015:1:exon
so has part: feature:116113-116133:1:exon
so has part: feature:116265-116297:1:exon
so has part: feature:116378-116913:1:exon

XP_021269126.1
type: Protein
SIO_000068: ncbiprotein

position:104859:1
position: 104859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116913:1
position: 116913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104859-105423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105851-105955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106272-106292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106781-106801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107058-107074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107305-107325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107684-107704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107807-107827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107937-107957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108062-108082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:108180-108200:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:108545-108565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:108909-108929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109155-109298:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:109408-109428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:109543-109563:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109789-109809:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:110158-110178:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:110346-110436:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:114772-114792:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:115127-115147:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:115637-115657:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:115753-115773:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:115876-115896:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:115995-116015:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:116113-116133:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:116265-116297:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:116378-116913:1:exon

LOC110406695
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 105963..110760
location: region:105963-110760:1
so has part: feature:105963-110760:1:exon
subclass of: SO_0000010

110406695
type: Gene
SIO_000068: ncbigene

position:105963:1
position: 105963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110760:1
position: 110760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105963-110760:1:exon

LOC110406695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406695
product: uncharacterized LOC110406695
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021413517.1
SIO_010081: LOC110406695
subclass of: SO_0000673
so part of: LOC110406695
location: join(105963..106680,106781..106801,106933..106953,107058..107078,107177..107197,107305..107325,107428..107448,107559..107579,107684..107704,107807..107827,107937..107957,108062..108082,108180..108200,108296..108316,108417..108437,108545..108565,108653..108673,108784..108804,108909..108929,109029..109049,109155..109175,109278..109298,109408..109428,109543..109563,109661..109681,109789..109809,109912..109929,110040..110060,110158..110178,110272..110760)
location: region:105963-110760:1
so has part: feature:105963-106680:1:exon
so has part: feature:106781-106801:1:exon
so has part: feature:106933-106953:1:exon
so has part: feature:107058-107078:1:exon
so has part: feature:107177-107197:1:exon
so has part: feature:107305-107325:1:exon
so has part: feature:107428-107448:1:exon
so has part: feature:107559-107579:1:exon
so has part: feature:107684-107704:1:exon
so has part: feature:107807-107827:1:exon
so has part: feature:107937-107957:1:exon
so has part: feature:108062-108082:1:exon
so has part: feature:108180-108200:1:exon
so has part: feature:108296-108316:1:exon
so has part: feature:108417-108437:1:exon
so has part: feature:108545-108565:1:exon
so has part: feature:108653-108673:1:exon
so has part: feature:108784-108804:1:exon
so has part: feature:108909-108929:1:exon
so has part: feature:109029-109049:1:exon
so has part: feature:109155-109175:1:exon
so has part: feature:109278-109298:1:exon
so has part: feature:109408-109428:1:exon
so has part: feature:109543-109563:1:exon
so has part: feature:109661-109681:1:exon
so has part: feature:109789-109809:1:exon
so has part: feature:109912-109929:1:exon
so has part: feature:110040-110060:1:exon
so has part: feature:110158-110178:1:exon
so has part: feature:110272-110760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105963-106680:1:exon

position:106680:1
position: 106680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106781-106801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106933-106953:1:exon

position:106933:1
position: 106933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106953:1
position: 106953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107058-107078:1:exon

position:107078:1
position: 107078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107177-107197:1:exon

position:107177:1
position: 107177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107197:1
position: 107197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107305-107325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107428-107448:1:exon

position:107428:1
position: 107428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107448:1
position: 107448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107559-107579:1:exon

position:107559:1
position: 107559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107579:1
position: 107579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:107684-107704:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:107807-107827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107937-107957:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:108062-108082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:108180-108200:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:108296-108316:1:exon

position:108296:1
position: 108296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108316:1
position: 108316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:108417-108437:1:exon

position:108417:1
position: 108417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108437:1
position: 108437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:108545-108565:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108653-108673:1:exon

position:108653:1
position: 108653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108673:1
position: 108673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:108784-108804:1:exon

position:108784:1
position: 108784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108804:1
position: 108804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:108909-108929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:109029-109049:1:exon

position:109029:1
position: 109029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109049:1
position: 109049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:109155-109175:1:exon

position:109175:1
position: 109175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:109278-109298:1:exon

position:109278:1
position: 109278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:109408-109428:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:109543-109563:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109661-109681:1:exon

position:109661:1
position: 109661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109681:1
position: 109681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:109789-109809:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109912-109929:1:exon

position:109912:1
position: 109912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109929:1
position: 109929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:110040-110060:1:exon

position:110040:1
position: 110040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110060:1
position: 110060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:110158-110178:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:110272-110760:1:exon

position:110272:1
position: 110272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110406695
translation: MHCSCLSFPAELTARLGLSAADLMKQVAKLVEQTEAVEKCNSALKKHHENTGLNAADLKKLAAKLRIHCIWMGRWDAKLETLSAKLVDQTEALEERTKILGEDIEELEKGNTTLKERCEKMDISVAKLKILSAKLKKQTEELEKGNSLLKIRHKNRERRDAKLEEKVAEPVEQTEDEKKENLLLDKHYEEMGFAADLKEKVAEQMEQTEELEETSAE
SIO_010081: LOC110406695
subclass of: SO_0000673
so part of: LOC110406695
location: join(106632..106680,106781..106801,106933..106953,107058..107078,107177..107197,107305..107325,107428..107448,107559..107579,107684..107704,107807..107827,107937..107957,108062..108082,108180..108200,108296..108316,108417..108437,108545..108565,108653..108673,108784..108804,108909..108929,109029..109049,109155..109175,109278..109298,109408..109428,109543..109563,109661..109681,109789..109809,109912..109929,110040..110060,110158..110178,110272..110291)
location: region:106632-110291:1
so has part: feature:106632-106680:1:exon
so has part: feature:106781-106801:1:exon
so has part: feature:106933-106953:1:exon
so has part: feature:107058-107078:1:exon
so has part: feature:107177-107197:1:exon
so has part: feature:107305-107325:1:exon
so has part: feature:107428-107448:1:exon
so has part: feature:107559-107579:1:exon
so has part: feature:107684-107704:1:exon
so has part: feature:107807-107827:1:exon
so has part: feature:107937-107957:1:exon
so has part: feature:108062-108082:1:exon
so has part: feature:108180-108200:1:exon
so has part: feature:108296-108316:1:exon
so has part: feature:108417-108437:1:exon
so has part: feature:108545-108565:1:exon
so has part: feature:108653-108673:1:exon
so has part: feature:108784-108804:1:exon
so has part: feature:108909-108929:1:exon
so has part: feature:109029-109049:1:exon
so has part: feature:109155-109175:1:exon
so has part: feature:109278-109298:1:exon
so has part: feature:109408-109428:1:exon
so has part: feature:109543-109563:1:exon
so has part: feature:109661-109681:1:exon
so has part: feature:109789-109809:1:exon
so has part: feature:109912-109929:1:exon
so has part: feature:110040-110060:1:exon
so has part: feature:110158-110178:1:exon
so has part: feature:110272-110291:1:exon

XP_021269192.1
type: Protein
SIO_000068: ncbiprotein

position:106632:1
position: 106632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110291:1
position: 110291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106632-106680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106781-106801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106933-106953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107058-107078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107177-107197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107305-107325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107428-107448:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107559-107579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107684-107704:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:107807-107827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107937-107957:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:108062-108082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:108180-108200:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:108296-108316:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:108417-108437:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108545-108565:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108653-108673:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:108784-108804:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:108909-108929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:109029-109049:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:109155-109175:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:109278-109298:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:109408-109428:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:109543-109563:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109661-109681:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:109789-109809:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109912-109929:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:110040-110060:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:110158-110178:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:110272-110291:1:exon

LOC110406677
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(117521..121949)
location: region:117521-121949:-1
so has part: feature:117521-121949:-1:exon
subclass of: SO_0000010

110406677
type: Gene
SIO_000068: ncbigene

position:117521:-1
position: 117521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121949:-1
position: 121949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117521-121949:-1:exon

LOC110406677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406677
product: tripartite motif-containing protein 7-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021413481.1
SIO_010081: LOC110406677
subclass of: SO_0000673
so part of: LOC110406677
location: complement(join(117521..118252,118478..118537,118820..118935,119291..119313,119423..119653,119732..119827,119952..120386,121823..121949))
location: region:117521-121949:-1
so has part: feature:121823-121949:-1:exon
so has part: feature:119952-120386:-1:exon
so has part: feature:119732-119827:-1:exon
so has part: feature:119423-119653:-1:exon
so has part: feature:119291-119313:-1:exon
so has part: feature:118820-118935:-1:exon
so has part: feature:118478-118537:-1:exon
so has part: feature:117521-118252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121823-121949:-1:exon

position:121823:-1
position: 121823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119952-120386:-1:exon

position:119952:-1
position: 119952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120386:-1
position: 120386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119732-119827:-1:exon

position:119732:-1
position: 119732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119827:-1
position: 119827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119423-119653:-1:exon

position:119423:-1
position: 119423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119653:-1
position: 119653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119291-119313:-1:exon

position:119291:-1
position: 119291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119313:-1
position: 119313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:118820-118935:-1:exon

position:118820:-1
position: 118820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118935:-1
position: 118935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:118478-118537:-1:exon

position:118478:-1
position: 118478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118537:-1
position: 118537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:117521-118252:-1:exon

position:118252:-1
position: 118252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406677
product: tripartite motif-containing protein 7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021413478.1
SIO_010081: LOC110406677
subclass of: SO_0000673
so part of: LOC110406677
location: complement(join(117521..118252,118478..118537,118820..118935,119291..119313,119423..119653,119732..119827,119952..121176,121823..121949))
location: region:117521-121949:-1
so has part: feature:121823-121949:-1:exon
so has part: feature:119952-121176:-1:exon
so has part: feature:119732-119827:-1:exon
so has part: feature:119423-119653:-1:exon
so has part: feature:119291-119313:-1:exon
so has part: feature:118820-118935:-1:exon
so has part: feature:118478-118537:-1:exon
so has part: feature:117521-118252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121823-121949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119952-121176:-1:exon

position:121176:-1
position: 121176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119732-119827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119423-119653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119291-119313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118820-118935:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118478-118537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117521-118252:-1:exon

LOC110406677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406677
product: tripartite motif-containing protein 7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021413479.1
SIO_010081: LOC110406677
subclass of: SO_0000673
so part of: LOC110406677
location: complement(join(117521..118252,118478..118537,118820..118935,119291..119313,119423..119653,119732..119827,119952..121176,121819..121931))
location: region:117521-121931:-1
so has part: feature:121819-121931:-1:exon
so has part: feature:119952-121176:-1:exon
so has part: feature:119732-119827:-1:exon
so has part: feature:119423-119653:-1:exon
so has part: feature:119291-119313:-1:exon
so has part: feature:118820-118935:-1:exon
so has part: feature:118478-118537:-1:exon
so has part: feature:117521-118252:-1:exon

position:121931:-1
position: 121931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121819-121931:-1:exon

position:121819:-1
position: 121819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119952-121176:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119732-119827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119423-119653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119291-119313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118820-118935:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118478-118537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117521-118252:-1:exon

LOC110406677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406677
product: tripartite motif-containing protein 7-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021413480.1
SIO_010081: LOC110406677
subclass of: SO_0000673
so part of: LOC110406677
location: complement(join(117521..118252,118478..118537,118820..118935,119291..119313,119423..119653,119732..119827,119952..120386,121086..121829))
location: region:117521-121829:-1
so has part: feature:121086-121829:-1:exon
so has part: feature:119952-120386:-1:exon
so has part: feature:119732-119827:-1:exon
so has part: feature:119423-119653:-1:exon
so has part: feature:119291-119313:-1:exon
so has part: feature:118820-118935:-1:exon
so has part: feature:118478-118537:-1:exon
so has part: feature:117521-118252:-1:exon

position:121829:-1
position: 121829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121086-121829:-1:exon

position:121086:-1
position: 121086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119952-120386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119732-119827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119423-119653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119291-119313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118820-118935:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118478-118537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117521-118252:-1:exon

LOC110406677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7-like isoform X1
translation: MLNPSVFSPQGRERGSQEVGDRTTMASAASRAKEKGEEGSHRPVLEHQMDDGCGGSVGRGGGTWPERGRLGDAEVVSHRNHLRKGNFHTKLHLAHLAEKLKLLGLDGDREEEEKLCSWRKRTFLSNGPRGDESSPGAPIKESAQEDRVSPVLFPKEQIRSDLESLKKQKEELLELKMSGERRCQDLLARMEAERQKIVSEFRQLRRFLKEQEVVLLARLGELDRAVLRRQEEEEAKVEGDISLLSILICEMEEKLKQPSCGFLQDARSTLGRWEMGRTQRMTENFKDVEQRLCAISQQNKILRETLGRFQDLLPSELEKEEGASIGEEGKAFVTLDPTTATAGLVLSRDRRGVRWMDTGHDVSPCPQRFDVSCCVLGCRGFTSGRHFWDVEVTSGGTWALGVARGSVPRKGWLTFHPDYGIWAMGCCRNRFRAFTSPPSTLPMSGNPNRIRVVLDYGGGRVAFYLTAQKNPIFAFQNASFCGESVFPFFWVGRGSHLRLCP
SIO_010081: LOC110406677
subclass of: SO_0000673
so part of: LOC110406677
location: complement(join(117738..118252,118478..118537,118820..118935,119291..119313,119423..119653,119732..119827,119952..120416))
location: region:117738-120416:-1
so has part: feature:119952-120416:-1:exon
so has part: feature:119732-119827:-1:exon
so has part: feature:119423-119653:-1:exon
so has part: feature:119291-119313:-1:exon
so has part: feature:118820-118935:-1:exon
so has part: feature:118478-118537:-1:exon
so has part: feature:117738-118252:-1:exon

XP_021269153.1
type: Protein
SIO_000068: ncbiprotein

position:117738:-1
position: 117738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120416:-1
position: 120416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119952-120416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119732-119827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119423-119653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119291-119313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118820-118935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118478-118537:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117738-118252:-1:exon

LOC110406677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7-like isoform X1
translation: MLNPSVFSPQGRERGSQEVGDRTTMASAASRAKEKGEEGSHRPVLEHQMDDGCGGSVGRGGGTWPERGRLGDAEVVSHRNHLRKGNFHTKLHLAHLAEKLKLLGLDGDREEEEKLCSWRKRTFLSNGPRGDESSPGAPIKESAQEDRVSPVLFPKEQIRSDLESLKKQKEELLELKMSGERRCQDLLARMEAERQKIVSEFRQLRRFLKEQEVVLLARLGELDRAVLRRQEEEEAKVEGDISLLSILICEMEEKLKQPSCGFLQDARSTLGRWEMGRTQRMTENFKDVEQRLCAISQQNKILRETLGRFQDLLPSELEKEEGASIGEEGKAFVTLDPTTATAGLVLSRDRRGVRWMDTGHDVSPCPQRFDVSCCVLGCRGFTSGRHFWDVEVTSGGTWALGVARGSVPRKGWLTFHPDYGIWAMGCCRNRFRAFTSPPSTLPMSGNPNRIRVVLDYGGGRVAFYLTAQKNPIFAFQNASFCGESVFPFFWVGRGSHLRLCP
SIO_010081: LOC110406677
subclass of: SO_0000673
so part of: LOC110406677
location: complement(join(117738..118252,118478..118537,118820..118935,119291..119313,119423..119653,119732..119827,119952..120416))
location: region:117738-120416:-1
so has part: feature:119952-120416:-1:exon
so has part: feature:119732-119827:-1:exon
so has part: feature:119423-119653:-1:exon
so has part: feature:119291-119313:-1:exon
so has part: feature:118820-118935:-1:exon
so has part: feature:118478-118537:-1:exon
so has part: feature:117738-118252:-1:exon

XP_021269154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119952-120416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119732-119827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119423-119653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119291-119313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118820-118935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118478-118537:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117738-118252:-1:exon

LOC110406677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7-like isoform X2
translation: MASAASRAKEKGEEGSHRPVLEHQMDDGCGGSVGRGGGTWPERGRLGDAEVVSHRNHLRKGNFHTKLHLAHLAEKLKLLGLDGDREEEEKLCSWRKRTFLSNGPRGDESSPGAPIKESAQEDRVSPVLFPKEQIRSDLESLKKQKEELLELKMSGERRCQDLLARMEAERQKIVSEFRQLRRFLKEQEVVLLARLGELDRAVLRRQEEEEAKVEGDISLLSILICEMEEKLKQPSCGFLQDARSTLGRWEMGRTQRMTENFKDVEQRLCAISQQNKILRETLGRFQDLLPSELEKEEGASIGEEGKAFVTLDPTTATAGLVLSRDRRGVRWMDTGHDVSPCPQRFDVSCCVLGCRGFTSGRHFWDVEVTSGGTWALGVARGSVPRKGWLTFHPDYGIWAMGCCRNRFRAFTSPPSTLPMSGNPNRIRVVLDYGGGRVAFYLTAQKNPIFAFQNASFCGESVFPFFWVGRGSHLRLCP
SIO_010081: LOC110406677
subclass of: SO_0000673
so part of: LOC110406677
location: complement(join(117738..118252,118478..118537,118820..118935,119291..119313,119423..119653,119732..119827,119952..120344))
location: region:117738-120344:-1
so has part: feature:119952-120344:-1:exon
so has part: feature:119732-119827:-1:exon
so has part: feature:119423-119653:-1:exon
so has part: feature:119291-119313:-1:exon
so has part: feature:118820-118935:-1:exon
so has part: feature:118478-118537:-1:exon
so has part: feature:117738-118252:-1:exon

XP_021269155.1
type: Protein
SIO_000068: ncbiprotein

position:120344:-1
position: 120344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119952-120344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119732-119827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119423-119653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119291-119313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118820-118935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118478-118537:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117738-118252:-1:exon

LOC110406677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7-like isoform X2
translation: MASAASRAKEKGEEGSHRPVLEHQMDDGCGGSVGRGGGTWPERGRLGDAEVVSHRNHLRKGNFHTKLHLAHLAEKLKLLGLDGDREEEEKLCSWRKRTFLSNGPRGDESSPGAPIKESAQEDRVSPVLFPKEQIRSDLESLKKQKEELLELKMSGERRCQDLLARMEAERQKIVSEFRQLRRFLKEQEVVLLARLGELDRAVLRRQEEEEAKVEGDISLLSILICEMEEKLKQPSCGFLQDARSTLGRWEMGRTQRMTENFKDVEQRLCAISQQNKILRETLGRFQDLLPSELEKEEGASIGEEGKAFVTLDPTTATAGLVLSRDRRGVRWMDTGHDVSPCPQRFDVSCCVLGCRGFTSGRHFWDVEVTSGGTWALGVARGSVPRKGWLTFHPDYGIWAMGCCRNRFRAFTSPPSTLPMSGNPNRIRVVLDYGGGRVAFYLTAQKNPIFAFQNASFCGESVFPFFWVGRGSHLRLCP
SIO_010081: LOC110406677
subclass of: SO_0000673
so part of: LOC110406677
location: complement(join(117738..118252,118478..118537,118820..118935,119291..119313,119423..119653,119732..119827,119952..120344))
location: region:117738-120344:-1
so has part: feature:119952-120344:-1:exon
so has part: feature:119732-119827:-1:exon
so has part: feature:119423-119653:-1:exon
so has part: feature:119291-119313:-1:exon
so has part: feature:118820-118935:-1:exon
so has part: feature:118478-118537:-1:exon
so has part: feature:117738-118252:-1:exon

XP_021269156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119952-120344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119732-119827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119423-119653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119291-119313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118820-118935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118478-118537:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117738-118252:-1:exon

LOC110406679
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121970..137622)
location: region:121970-137622:-1
so has part: feature:121970-137622:-1:exon
subclass of: SO_0000010

110406679
type: Gene
SIO_000068: ncbigene

position:121970:-1
position: 121970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137622:-1
position: 137622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121970-137622:-1:exon

LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021413487.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121970..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134412,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121970-137622:-1
so has part: feature:137533-137622:-1:exon
so has part: feature:135748-135852:-1:exon
so has part: feature:134817-134869:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134412:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:133135-133155:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:121970-123635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137533-137622:-1:exon

position:137533:-1
position: 137533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135748-135852:-1:exon

position:135748:-1
position: 135748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135852:-1
position: 135852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134817-134869:-1:exon

position:134817:-1
position: 134817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134869:-1
position: 134869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:134707-134727:-1:exon

position:134707:-1
position: 134707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134727:-1
position: 134727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134395-134412:-1:exon

position:134395:-1
position: 134395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134412:-1
position: 134412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134292-134312:-1:exon

position:134292:-1
position: 134292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134312:-1
position: 134312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134175-134195:-1:exon

position:134175:-1
position: 134175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134195:-1
position: 134195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133931-133951:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:133810-133830:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:133526-133546:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:133281-133301:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:133135-133155:-1:exon

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position:133155:-1
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urn:…
SIO_000300: 13
SIO_000628: feature:132669-132689:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:132514-132534:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:132397-132417:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:132259-132279:-1:exon

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position:132279:-1
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urn:…
SIO_000300: 17
SIO_000628: feature:131999-132019:-1:exon

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position:132019:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:131732-131752:-1:exon

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position:131752:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:131563-131583:-1:exon

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position:131583:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:131317-131337:-1:exon

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position:131337:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:130553-130573:-1:exon

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position:130573:-1
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urn:…
SIO_000300: 22
SIO_000628: feature:130360-130380:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:130261-130281:-1:exon

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position:130281:-1
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urn:…
SIO_000300: 24
SIO_000628: feature:129766-129786:-1:exon

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position:129786:-1
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urn:…
SIO_000300: 25
SIO_000628: feature:129094-129114:-1:exon

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position:129114:-1
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urn:…
SIO_000300: 26
SIO_000628: feature:128813-128833:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:128295-128315:-1:exon

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position:128315:-1
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urn:…
SIO_000300: 28
SIO_000628: feature:128111-128131:-1:exon

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position: 128111
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position:128131:-1
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urn:…
SIO_000300: 29
SIO_000628: feature:127837-127857:-1:exon

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position:127857:-1
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urn:…
SIO_000300: 30
SIO_000628: feature:127326-127346:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:127055-127078:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:126947-126967:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:126680-126700:-1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:126224-126244:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:125958-125978:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:125729-125749:-1:exon

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urn:…
SIO_000300: 37
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urn:…
SIO_000300: 38
SIO_000628: feature:124962-124982:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:124827-124847:-1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:124709-124729:-1:exon

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urn:…
SIO_000300: 41
SIO_000628: feature:124485-124505:-1:exon

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urn:…
SIO_000300: 42
SIO_000628: feature:124010-124030:-1:exon

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urn:…
SIO_000300: 43
SIO_000628: feature:123897-123917:-1:exon

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urn:…
SIO_000300: 44
SIO_000628: feature:121970-123635:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021413488.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121970..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121970-137622:-1
so has part: feature:137533-137622:-1:exon
so has part: feature:135748-135852:-1:exon
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so has part: feature:134707-134727:-1:exon
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so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
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so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
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so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:121970-123635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137533-137622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135748-135852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134817-134869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134395-134415:-1:exon

position:134415:-1
position: 134415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133135-133155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:121970-123635:-1:exon

LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021413493.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121970..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121970-137622:-1
so has part: feature:137533-137622:-1:exon
so has part: feature:135748-135852:-1:exon
so has part: feature:134817-134869:-1:exon
so has part: feature:134707-134727:-1:exon
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so has part: feature:131999-132019:-1:exon
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so has part: feature:130360-130380:-1:exon
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so has part: feature:129766-129786:-1:exon
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so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
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so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
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so has part: feature:125958-125978:-1:exon
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so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:121970-123635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137533-137622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135748-135852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134817-134869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134707-134727:-1:exon

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urn:…
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LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021413489.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121970..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121970-137622:-1
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urn:…
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urn:…
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SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:121970-123635:-1:exon

LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021413491.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121973..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133810..133830,133931..133951,134175..134195,134292..134312,134395..134412,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121973-137622:-1
so has part: feature:137533-137622:-1:exon
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so has part: feature:121973-123635:-1:exon

position:121973:-1
position: 121973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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SIO_000628: feature:121973-123635:-1:exon

LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021413492.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121973..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133281..133301,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121973-137622:-1
so has part: feature:137533-137622:-1:exon
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urn:…
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LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021413490.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121973..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121973-137622:-1
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urn:…
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SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:121973-123635:-1:exon

LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_021413494.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121973..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125464,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121973-137622:-1
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urn:…
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position:125464:-1
position: 125464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021413484.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121973..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134869,135748..135852,137533..137622))
location: region:121973-137622:-1
so has part: feature:137533-137622:-1:exon
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so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:133135-133155:-1:exon
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so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
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so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
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so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
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so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:121973-123635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137533-137622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135748-135852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134817-134869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133281-133301:-1:exon

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urn:…
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urn:…
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SIO_000628: feature:132259-132279:-1:exon

urn:…
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SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:131732-131752:-1:exon

urn:…
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SIO_000628: feature:131563-131583:-1:exon

urn:…
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SIO_000628: feature:131317-131337:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:121973-123635:-1:exon

LOC110406679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406679
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021413486.1
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(121973..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134869,135748..135905,137533..137606))
location: region:121973-137606:-1
so has part: feature:137533-137606:-1:exon
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so has part: feature:134817-134869:-1:exon
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so has part: feature:131999-132019:-1:exon
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so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
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so has part: feature:127326-127346:-1:exon
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so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:121973-123635:-1:exon

position:137606:-1
position: 137606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137533-137606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135748-135905:-1:exon

position:135905:-1
position: 135905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134817-134869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134395-134415:-1:exon

urn:…
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SIO_000628: feature:134292-134312:-1:exon

urn:…
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SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:133135-133155:-1:exon

urn:…
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SIO_000628: feature:132669-132689:-1:exon

urn:…
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SIO_000628: feature:132514-132534:-1:exon

urn:…
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SIO_000628: feature:132397-132417:-1:exon

urn:…
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SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131999-132019:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:127837-127857:-1:exon

urn:…
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SIO_000628: feature:127326-127346:-1:exon

urn:…
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SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:126947-126967:-1:exon

urn:…
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SIO_000628: feature:126680-126700:-1:exon

urn:…
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SIO_000628: feature:126224-126244:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:125444-125566:-1:exon

urn:…
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SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:121973-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X6
translation: MMASGKRNADLEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133810..133830,133931..133951,134175..134195,134292..134312,134395..134412,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
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so has part: feature:134395-134412:-1:exon
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so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
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so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
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so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269166.1
type: Protein
SIO_000068: ncbiprotein

position:123124:-1
position: 123124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134829:-1
position: 134829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
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SIO_000628: feature:134395-134412:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:133281-133301:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:125958-125978:-1:exon

urn:…
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urn:…
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SIO_000628: feature:125444-125566:-1:exon

urn:…
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SIO_000628: feature:124962-124982:-1:exon

urn:…
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urn:…
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SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X2
translation: MMASGKRNADLEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIERLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134412,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134412:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:133135-133155:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X7
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIEERDRKIRDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133281..133301,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134415:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X3
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134415:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:133135-133155:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133135-133155:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X8
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIERLTAELEERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134415:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X4
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIERLTAELEERDRKIRDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134415:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X5
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIERLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIKNRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134415:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:133135-133155:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X9
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIERLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125464,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134415:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:133135-133155:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125464:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:125444-125464:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X1
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIERLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134415:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:133135-133155:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:123124-123635:-1:exon

LOC110406679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X1
translation: MMASGKRNADLEEWDAKIRKLTEDFEESDTELEECDTEDGELAAEIERLTAELEERDRKIRKLTSDLGDVDTKLKERDRKITKLSAEIRRLTALLGDRDSKLRKLTAELAKCDATIRLFTVELGERHTKIGELTAEVGDYDRKLRKHAAELEERDLKIREHKAEIRHLTELLENRDSEVREQDILIRKLSEELEELKGREAEESDLERDELTEELDEVTEELGERDKKIGELTAELEWKIEGLSPDDEHRKKRGCLGMTFFLSFLFFPFLEERNAKIGELSAEVEKRERRIDELTAELEHYKAKARKCFEEHRRGEEKLVKVTLDPETAHPRLVLSEDQKSVRWEYTLQESPDGPERFDADPCVLGCEAFTSGRHCWVVDLAEGQYCAVGVSRESLPRKRAVSFNPDEGIWAVQQWGFKNRALTSPPTPLNLPRVPKKIRISLDYDWGEVAFFDAENQVPIFTFPPAFFGGERLRPWFWVELGSLSLPR
SIO_010081: LOC110406679
subclass of: SO_0000673
so part of: LOC110406679
location: complement(join(123124..123635,123897..123917,124010..124030,124485..124505,124709..124729,124827..124847,124962..124982,125444..125566,125729..125749,125958..125978,126224..126244,126680..126700,126947..126967,127055..127078,127326..127346,127837..127857,128111..128131,128295..128315,128813..128833,129094..129114,129766..129786,130261..130281,130360..130380,130553..130573,131317..131337,131563..131583,131732..131752,131999..132019,132259..132279,132397..132417,132514..132534,132669..132689,133135..133155,133281..133301,133526..133546,133810..133830,133931..133951,134175..134195,134292..134312,134395..134415,134707..134727,134817..134829))
location: region:123124-134829:-1
so has part: feature:134817-134829:-1:exon
so has part: feature:134707-134727:-1:exon
so has part: feature:134395-134415:-1:exon
so has part: feature:134292-134312:-1:exon
so has part: feature:134175-134195:-1:exon
so has part: feature:133931-133951:-1:exon
so has part: feature:133810-133830:-1:exon
so has part: feature:133526-133546:-1:exon
so has part: feature:133281-133301:-1:exon
so has part: feature:133135-133155:-1:exon
so has part: feature:132669-132689:-1:exon
so has part: feature:132514-132534:-1:exon
so has part: feature:132397-132417:-1:exon
so has part: feature:132259-132279:-1:exon
so has part: feature:131999-132019:-1:exon
so has part: feature:131732-131752:-1:exon
so has part: feature:131563-131583:-1:exon
so has part: feature:131317-131337:-1:exon
so has part: feature:130553-130573:-1:exon
so has part: feature:130360-130380:-1:exon
so has part: feature:130261-130281:-1:exon
so has part: feature:129766-129786:-1:exon
so has part: feature:129094-129114:-1:exon
so has part: feature:128813-128833:-1:exon
so has part: feature:128295-128315:-1:exon
so has part: feature:128111-128131:-1:exon
so has part: feature:127837-127857:-1:exon
so has part: feature:127326-127346:-1:exon
so has part: feature:127055-127078:-1:exon
so has part: feature:126947-126967:-1:exon
so has part: feature:126680-126700:-1:exon
so has part: feature:126224-126244:-1:exon
so has part: feature:125958-125978:-1:exon
so has part: feature:125729-125749:-1:exon
so has part: feature:125444-125566:-1:exon
so has part: feature:124962-124982:-1:exon
so has part: feature:124827-124847:-1:exon
so has part: feature:124709-124729:-1:exon
so has part: feature:124485-124505:-1:exon
so has part: feature:124010-124030:-1:exon
so has part: feature:123897-123917:-1:exon
so has part: feature:123124-123635:-1:exon

XP_021269161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134817-134829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134707-134727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134395-134415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134292-134312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134175-134195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133931-133951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133810-133830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133526-133546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133281-133301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133135-133155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132669-132689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132514-132534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132397-132417:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:132259-132279:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131999-132019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:131732-131752:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:131563-131583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:131317-131337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130553-130573:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:130360-130380:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:130261-130281:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:129766-129786:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:129094-129114:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128813-128833:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128295-128315:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:128111-128131:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:127837-127857:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:127326-127346:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:127055-127078:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:126947-126967:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:126680-126700:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:126224-126244:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:125958-125978:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:125729-125749:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:125444-125566:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:124962-124982:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:124827-124847:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:124709-124729:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:124485-124505:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:124010-124030:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:123897-123917:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:123124-123635:-1:exon

RACK1
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 137838..141494
location: region:137838-141494:1
so has part: feature:137838-141494:1:exon
subclass of: SO_0000010

110406687
type: Gene
SIO_000068: ncbigene

position:137838:1
position: 137838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141494:1
position: 141494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137838-141494:1:exon

RACK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: RACK1
product: receptor for activated C kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_021413507.1
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: join(137838..138058,138528..138699,139520..139667,139957..140052,140182..140292,140504..140644,141033..141143,141364..141494)
location: region:137838-141494:1
so has part: feature:137838-138058:1:exon
so has part: feature:138528-138699:1:exon
so has part: feature:139520-139667:1:exon
so has part: feature:139957-140052:1:exon
so has part: feature:140182-140292:1:exon
so has part: feature:140504-140644:1:exon
so has part: feature:141033-141143:1:exon
so has part: feature:141364-141494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137838-138058:1:exon

position:138058:1
position: 138058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:138528-138699:1:exon

position:138528:1
position: 138528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138699:1
position: 138699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139520-139667:1:exon

position:139520:1
position: 139520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139667:1
position: 139667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139957-140052:1:exon

position:139957:1
position: 139957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140052:1
position: 140052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140182-140292:1:exon

position:140182:1
position: 140182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140292:1
position: 140292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140504-140644:1:exon

position:140504:1
position: 140504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140644:1
position: 140644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:141033-141143:1:exon

position:141033:1
position: 141033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141143:1
position: 141143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:141364-141494:1:exon

position:141364:1
position: 141364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor of activated protein C kinase 1
translation: MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: join(137950..138058,138528..138699,139520..139667,139957..140052,140182..140292,140504..140644,141033..141143,141364..141429)
location: region:137950-141429:1
so has part: feature:137950-138058:1:exon
so has part: feature:138528-138699:1:exon
so has part: feature:139520-139667:1:exon
so has part: feature:139957-140052:1:exon
so has part: feature:140182-140292:1:exon
so has part: feature:140504-140644:1:exon
so has part: feature:141033-141143:1:exon
so has part: feature:141364-141429:1:exon

XP_021269182.1
type: Protein
SIO_000068: ncbiprotein

position:137950:1
position: 137950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141429:1
position: 141429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137950-138058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138528-138699:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139520-139667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139957-140052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140182-140292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140504-140644:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141033-141143:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141364-141429:1:exon

TRIM41
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141956..148197)
location: region:141956-148197:-1
so has part: feature:141956-148197:-1:exon
subclass of: SO_0000010

110406671
type: Gene
SIO_000068: ncbigene

position:141956:-1
position: 141956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148197:-1
position: 148197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141956-148197:-1:exon

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: TRIM41
product: tripartite motif containing 41
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_021413469.1
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(141956..143558,143933..144060,144639..144661,145057..145287,145795..145890,146302..146819,147371..148197))
location: region:141956-148197:-1
so has part: feature:147371-148197:-1:exon
so has part: feature:146302-146819:-1:exon
so has part: feature:145795-145890:-1:exon
so has part: feature:145057-145287:-1:exon
so has part: feature:144639-144661:-1:exon
so has part: feature:143933-144060:-1:exon
so has part: feature:141956-143558:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147371-148197:-1:exon

position:147371:-1
position: 147371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146302-146819:-1:exon

position:146302:-1
position: 146302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146819:-1
position: 146819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145795-145890:-1:exon

position:145795:-1
position: 145795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145890:-1
position: 145890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145057-145287:-1:exon

position:145057:-1
position: 145057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145287:-1
position: 145287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:144639-144661:-1:exon

position:144639:-1
position: 144639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144661:-1
position: 144661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:143933-144060:-1:exon

position:143933:-1
position: 143933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144060:-1
position: 144060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:141956-143558:-1:exon

position:143558:-1
position: 143558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41
translation: MEAVGDDGASSGRLNPVETLQEEAICAICLDYFVEPVSIGCGHNFCRVCIAQLWGGGEAELEESGGAAALEEEEEELEEEEEDELGEEELDVEQEEEEEDGGGEEEEDDMWSEEEDDGELWEDPVEEELWDGGVQGELYFGGDDDYDEDVMEEDVEEEEEEEEEAQSPPPPVLPARPRRLQTFTCPQCRKTFFQRNFRPNLQLANMVQIIRQLHPHPQRLAPPAGPSASGGPGGNPGVLVATGGRGCPNLCEKHQEPLKLFCEVDEQAICVVCRESRSHKHHSVVPLEEVVQDYKYKLQSHLEPLKKKLDAVLKQKSNEQEKITELREKMKLEIKEFESDFELLHQFLIGEHVLLLHQLEERYESLLARQSSNISQLEEQSAALSRLIAEAEDKSKQDGLQLLKDIKGTFLRCENIKFQEPEMVLVDVGKKYRNYFLQDVVMRKMEKAFSKVPQADITLDPDTAHPRLSLSLDRRSVKLGERRQDLPDNPKRFDSDYCVLGSQGFTTGRHYWEVEVGGRKGWAVGAARETARRKEKTMGPHQKREIWCVGTNGKKYQALTATEQMALSPSERPRRFGVYLDYERGQLCFYNAESMTHIHTFNASFHERIFPFFRILAKGTRIKICT
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(143041..143558,143933..144060,144639..144661,145057..145287,145795..145890,146302..146819,147371..147737))
location: region:143041-147737:-1
so has part: feature:147371-147737:-1:exon
so has part: feature:146302-146819:-1:exon
so has part: feature:145795-145890:-1:exon
so has part: feature:145057-145287:-1:exon
so has part: feature:144639-144661:-1:exon
so has part: feature:143933-144060:-1:exon
so has part: feature:143041-143558:-1:exon

XP_021269144.1
type: Protein
SIO_000068: ncbiprotein

position:143041:-1
position: 143041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147737:-1
position: 147737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147371-147737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146302-146819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145795-145890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145057-145287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144639-144661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143933-144060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:143041-143558:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 148341..148413
location: region:148341-148413:1
so has part: feature:148341-148413:1:exon
subclass of: SO_0000663

110406701
type: Gene
SIO_000068: ncbigene

position:148341:1
position: 148341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148413:1
position: 148413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148341-148413:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:148374..148376,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 148341..148413
location: region:148341-148413:1
so has part: feature:148341-148413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148341-148413:1:exon

LOC110406678
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 148460..153712
location: region:148460-153712:1
so has part: feature:148460-153712:1:exon
subclass of: SO_0000010

110406678
type: Gene
SIO_000068: ncbigene

position:148460:1
position: 148460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153712:1
position: 153712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148460-153712:1:exon

LOC110406678
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406678
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_021413483.1
SIO_010081: LOC110406678
subclass of: SO_0000673
so part of: LOC110406678
location: join(148460..149779,150746..150838,151477..151707,152154..152269,152465..152494,152681..153228)
location: region:148460-153228:1
so has part: feature:148460-149779:1:exon
so has part: feature:150746-150838:1:exon
so has part: feature:151477-151707:1:exon
so has part: feature:152154-152269:1:exon
so has part: feature:152465-152494:1:exon
so has part: feature:152681-153228:1:exon

position:153228:1
position: 153228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148460-149779:1:exon

position:149779:1
position: 149779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150746-150838:1:exon

position:150746:1
position: 150746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150838:1
position: 150838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151477-151707:1:exon

position:151477:1
position: 151477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151707:1
position: 151707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152154-152269:1:exon

position:152154:1
position: 152154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152269:1
position: 152269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152465-152494:1:exon

position:152465:1
position: 152465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152494:1
position: 152494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:152681-153228:1:exon

position:152681:1
position: 152681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406678
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406678
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_021413482.1
SIO_010081: LOC110406678
subclass of: SO_0000673
so part of: LOC110406678
location: join(148467..149779,150746..150838,151477..151707,151927..151949,152154..152269,152465..152494,152681..153712)
location: region:148467-153712:1
so has part: feature:148467-149779:1:exon
so has part: feature:150746-150838:1:exon
so has part: feature:151477-151707:1:exon
so has part: feature:151927-151949:1:exon
so has part: feature:152154-152269:1:exon
so has part: feature:152465-152494:1:exon
so has part: feature:152681-153712:1:exon

position:148467:1
position: 148467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148467-149779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150746-150838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151477-151707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151927-151949:1:exon

position:151927:1
position: 151927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151949:1
position: 151949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152154-152269:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152465-152494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152681-153712:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 148733..148805
location: region:148733-148805:1
so has part: feature:148733-148805:1:exon
subclass of: SO_0000663

110406713
type: Gene
SIO_000068: ncbigene

position:148733:1
position: 148733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148805:1
position: 148805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148733-148805:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:148766..148768,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 148733..148805
location: region:148733-148805:1
so has part: feature:148733-148805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148733-148805:1:exon

LOC110406678
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X1
translation: MATRSPLDNLQSEASCSICLGYFQDPVSIPCGHNFCRECITRCWEGLEGNFPCPQCRKTASHKNFRPSRELANIAGIARQLSLHASDWCKQHREALKLFCKEDQEPICALCDASQAHRSHTVLPAHQAAQEYKEEIQARLQASKEEREKYLESRKAGGRTSLYLEKTKKEGKRIVCEFEQLQRFLKEQERFLLVQLAELDQAITKVQEDAVTKVLEETSHLDTLIWEMEGKFQQPDSKFLLDIRKLLNSCEVMKFNPPAEISPNLERRLEDFLQKNVLVRCTLQKCQDSLLFQLQEPANVTMDPSTAHPNLHLSEDRKQARGQLVPQDLPENPERFSFEPCVLGCQGFTSGRHFWEVEVGQGGVWALGVARASMKRKGPMSFTPKEGVWALEAYHSLTSPRANLRRNALPRRIRVSLDYEGGRVAFFSLDDDAPILVYTRALFNGERVLPWFKIGMGARLQEITQNSSSEDQTTSGQLMSHLDWVGFRSPLKICP
SIO_010081: LOC110406678
subclass of: SO_0000673
so part of: LOC110406678
location: join(149381..149779,150746..150838,151477..151707,151927..151949,152154..152269,152465..152494,152681..153276)
location: region:149381-153276:1
so has part: feature:149381-149779:1:exon
so has part: feature:150746-150838:1:exon
so has part: feature:151477-151707:1:exon
so has part: feature:151927-151949:1:exon
so has part: feature:152154-152269:1:exon
so has part: feature:152465-152494:1:exon
so has part: feature:152681-153276:1:exon

XP_021269157.1
type: Protein
SIO_000068: ncbiprotein

position:149381:1
position: 149381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153276:1
position: 153276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149381-149779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150746-150838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151477-151707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151927-151949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152154-152269:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152465-152494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152681-153276:1:exon

LOC110406678
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like isoform X2
translation: MATRSPLDNLQSEASCSICLGYFQDPVSIPCGHNFCRECITRCWEGLEGNFPCPQCRKTASHKNFRPSRELANIAGIARQLSLHASDWCKQHREALKLFCKEDQEPICALCDASQAHRSHTVLPAHQAAQEYKEEIQARLQASKEEREKYLESRKAGGRTSLYLEKTKKEGKRIVCEFEQLQRFLKEQERFLLVQLAELDQAITKVQEDAVTKVLEETSHLDTLIWEMEGKFQQPDSKFLLLRGDEVQPSGRDFPQSGKKTGGLSPEERPGEMHAAEVPRQPAVSVARASQRHHGPQHRSPQPPSLRRPKASPGPTGAAGPPGEPREVQLRALRAGLPGLHLGEAFLGGGGGTRGCVGPGGGPSFDEEEGTHELHPQRGRLGAGGLSLPYVPPCQPTSECSAQEDSGLPGLRRGSCGVFQLG
SIO_010081: LOC110406678
subclass of: SO_0000673
so part of: LOC110406678
location: join(149381..149779,150746..150838,151477..151707,152154..152269,152465..152494,152681..153080)
location: region:149381-153080:1
so has part: feature:149381-149779:1:exon
so has part: feature:150746-150838:1:exon
so has part: feature:151477-151707:1:exon
so has part: feature:152154-152269:1:exon
so has part: feature:152465-152494:1:exon
so has part: feature:152681-153080:1:exon

XP_021269158.1
type: Protein
SIO_000068: ncbiprotein

position:153080:1
position: 153080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149381-149779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150746-150838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151477-151707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152154-152269:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152465-152494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152681-153080:1:exon

LOC110406662
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <154557..159155
location: region:154557-159155:1
so has part: feature:154557-159155:1:exon
subclass of: SO_0000010

110406662
type: Gene
SIO_000068: ncbigene

position:154557:1
position: 154557
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:159155:1
position: 159155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154557-159155:1:exon

LOC110406662
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406662
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413452.1
SIO_010081: LOC110406662
subclass of: SO_0000673
so part of: LOC110406662
location: join(<154557..154664,155598..155708,156320..156342,156841..156956,157981..159155)
location: region:154557-159155:1
so has part: feature:154557-154664:1:exon
so has part: feature:155598-155708:1:exon
so has part: feature:156320-156342:1:exon
so has part: feature:156841-156956:1:exon
so has part: feature:157981-159155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154557-154664:1:exon

position:154664:1
position: 154664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155598-155708:1:exon

position:155598:1
position: 155598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155708:1
position: 155708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156320-156342:1:exon

position:156320:1
position: 156320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156342:1
position: 156342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156841-156956:1:exon

position:156841:1
position: 156841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156956:1
position: 156956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157981-159155:1:exon

position:157981:1
position: 157981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406662
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406662
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:154620..154622,aa:OTHER)
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39-like
translation: CVDLFCRHMYSVMGLSTRTAGXKWLEMFPPELRARTLEDLKNEIEKRQKSNAKLSEEISPLDAKAQGEKSQRSDVKSPVTRCGKVTSQLPAGVSPEPEERVSHFSWRSSALRETLKKLQASITLDPDTAHPDLILSEDRKGVKRGEGRQDLPDNPERFAYWPFVLGYQSFATGRHCWEVEVGDEGDWAVGVARESIPRKGQLSLCPKGGIWGVEKWGGQVRALTTHKVTLLALRWVPRRVSVHLDYAGGTVAFFDADEGGLIFVFSHASFAGERVRPWLWVVGARSKLRLCP
SIO_010081: LOC110406662
subclass of: SO_0000673
so part of: LOC110406662
location: join(<154557..154664,155598..155708,156320..156342,156841..156956,157981..158501)
location: region:154557-158501:1
so has part: feature:154557-154664:1:exon
so has part: feature:155598-155708:1:exon
so has part: feature:156320-156342:1:exon
so has part: feature:156841-156956:1:exon
so has part: feature:157981-158501:1:exon

XP_021269127.1
type: Protein
SIO_000068: ncbiprotein

position:158501:1
position: 158501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154557-154664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155598-155708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156320-156342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156841-156956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157981-158501:1:exon

LOC110406675
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(159288..163525)
location: region:159288-163525:-1
so has part: feature:159288-163525:-1:exon
subclass of: SO_0000010

110406675
type: Gene
SIO_000068: ncbigene

position:159288:-1
position: 159288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163525:-1
position: 163525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159288-163525:-1:exon

LOC110406675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406675
product: tripartite motif-containing protein 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021413475.1
SIO_010081: LOC110406675
subclass of: SO_0000673
so part of: LOC110406675
location: complement(join(159288..160079,160429..160458,160664..160779,160921..160943,161093..161323,161723..161818,162459..163525))
location: region:159288-163525:-1
so has part: feature:162459-163525:-1:exon
so has part: feature:161723-161818:-1:exon
so has part: feature:161093-161323:-1:exon
so has part: feature:160921-160943:-1:exon
so has part: feature:160664-160779:-1:exon
so has part: feature:160429-160458:-1:exon
so has part: feature:159288-160079:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162459-163525:-1:exon

position:162459:-1
position: 162459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161723-161818:-1:exon

position:161723:-1
position: 161723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161818:-1
position: 161818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:161093-161323:-1:exon

position:161093:-1
position: 161093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161323:-1
position: 161323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160921-160943:-1:exon

position:160921:-1
position: 160921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160943:-1
position: 160943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160664-160779:-1:exon

position:160664:-1
position: 160664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160779:-1
position: 160779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:160429-160458:-1:exon

position:160429:-1
position: 160429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160458:-1
position: 160458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:159288-160079:-1:exon

position:160079:-1
position: 160079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7-like
translation: MQPLGPGPSPALPPTPELSPGSAHPKPLGLVGRETPFPRCEENETLSAPWGPMAAPSPTPLLPSEASCPVCLEYFRDPVSIHCGHNFCRECITRCWEWSTGDFSCPHCKETAPERSIRPNRELARVLEIAKRLSLQAARGDGPGHEGCEKHREPLSIYCKDDEAFICVICRESRLHRAHAMLPVQDAVQEYKEQIQSHLQALKEDRDKLLGFREAEMRRNWEYLEKTSAERQKILGGFEGLRLFLEEQEHHLLAQLENLERDVEKTQEENVTSLTKEISHLDNVIQEMEEKCQQPASKFLQDIRSTLSRLGKENFQQPTLLLPDLERNLSHFREKNNALEEILRSFKEILMFELPEKMSVTLDPATAHPQLAVSADGRSVRWEDAQRDEANEEFGTDPFVLGYEGITSGRRCWEVEVTPKGSWAVGVAKESLKRREESSTSPEIELWSMGFCEGQFWALSSFERMTLPQIQVPRRVRVTLDYERGQVAFFDADKRALIFIFPSASFKGESIHPWFLVWSEGSQITLCP
SIO_010081: LOC110406675
subclass of: SO_0000673
so part of: LOC110406675
location: complement(join(159565..160079,160429..160458,160664..160779,160921..160943,161093..161323,161723..161818,162459..163034))
location: region:159565-163034:-1
so has part: feature:162459-163034:-1:exon
so has part: feature:161723-161818:-1:exon
so has part: feature:161093-161323:-1:exon
so has part: feature:160921-160943:-1:exon
so has part: feature:160664-160779:-1:exon
so has part: feature:160429-160458:-1:exon
so has part: feature:159565-160079:-1:exon

XP_021269150.1
type: Protein
SIO_000068: ncbiprotein

position:159565:-1
position: 159565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163034:-1
position: 163034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162459-163034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161723-161818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161093-161323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160921-160943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160664-160779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160429-160458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159565-160079:-1:exon

LOC110406682
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 164391..168973
location: region:164391-168973:1
so has part: feature:164391-168973:1:exon
subclass of: SO_0000010

110406682
type: Gene
SIO_000068: ncbigene

position:164391:1
position: 164391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168973:1
position: 168973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164391-168973:1:exon

LOC110406682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406682
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021413497.1
SIO_010081: LOC110406682
subclass of: SO_0000673
so part of: LOC110406682
location: join(164391..164626,165068..165534,166000..166095,166387..166617,167122..167144,167487..167602,168099..168973)
location: region:164391-168973:1
so has part: feature:164391-164626:1:exon
so has part: feature:165068-165534:1:exon
so has part: feature:166000-166095:1:exon
so has part: feature:166387-166617:1:exon
so has part: feature:167122-167144:1:exon
so has part: feature:167487-167602:1:exon
so has part: feature:168099-168973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164391-164626:1:exon

position:164626:1
position: 164626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165068-165534:1:exon

position:165068:1
position: 165068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165534:1
position: 165534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166000-166095:1:exon

position:166000:1
position: 166000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166095:1
position: 166095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166387-166617:1:exon

position:166387:1
position: 166387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166617:1
position: 166617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167122-167144:1:exon

position:167122:1
position: 167122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167144:1
position: 167144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167487-167602:1:exon

position:167487:1
position: 167487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167602:1
position: 167602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:168099-168973:1:exon

position:168099:1
position: 168099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406682
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_021413496.1
SIO_010081: LOC110406682
subclass of: SO_0000673
so part of: LOC110406682
location: join(164883..165534,166000..166095,166387..166617,167122..167144,167487..167602,168099..168973)
location: region:164883-168973:1
so has part: feature:164883-165534:1:exon
so has part: feature:166000-166095:1:exon
so has part: feature:166387-166617:1:exon
so has part: feature:167122-167144:1:exon
so has part: feature:167487-167602:1:exon
so has part: feature:168099-168973:1:exon

position:164883:1
position: 164883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164883-165534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166000-166095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166387-166617:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167122-167144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167487-167602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168099-168973:1:exon

LOC110406682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MDEDNPAESFQDEASCSLCLGFFQDPVSIHCGHNFCRACITRCWEEEEETFPCPRCKATATQRNLRPNRELAKIIEIAKRLSLRAPNAGERLCERHREALKLFCEEDQVPICLVCRESHAHRLHAAVPIEEAAEEHKEKIQAHVQILKEKEEKLQGLKAAEEGKSLEFLEKVEQERQKVLSDIKELHQFVEQQERLLLGQLEQLDQEIVRRKEENVAKLLEEISSVSEQIRELEEKCQQPPCEFLQDSGNILSRLEKEKSQEVPEIWPEVEENPTRPPQRNTALKETLMQFRESLTLDPDTAHPRLVLSEDHKCVRWEETRHPVPDNPKRFDSSRCVLGCEGFIAGRHYWEVEVGDGEAWAVGVAKESVERKGRISVKPEVGIWAVGQCGAQYQALTSPTSPITLLAAPKVIGIYLDYEAGRVAFFDANNEVPIFTYPPTSFGGERVLPLLCLGRGCRFTLSP
SIO_010081: LOC110406682
subclass of: SO_0000673
so part of: LOC110406682
location: join(165124..165534,166000..166095,166387..166617,167122..167144,167487..167602,168099..168613)
location: region:165124-168613:1
so has part: feature:165124-165534:1:exon
so has part: feature:166000-166095:1:exon
so has part: feature:166387-166617:1:exon
so has part: feature:167122-167144:1:exon
so has part: feature:167487-167602:1:exon
so has part: feature:168099-168613:1:exon

XP_021269171.1
type: Protein
SIO_000068: ncbiprotein

position:165124:1
position: 165124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168613:1
position: 168613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165124-165534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166000-166095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166387-166617:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167122-167144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167487-167602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168099-168613:1:exon

LOC110406682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MDEDNPAESFQDEASCSLCLGFFQDPVSIHCGHNFCRACITRCWEEEEETFPCPRCKATATQRNLRPNRELAKIIEIAKRLSLRAPNAGERLCERHREALKLFCEEDQVPICLVCRESHAHRLHAAVPIEEAAEEHKEKIQAHVQILKEKEEKLQGLKAAEEGKSLEFLEKVEQERQKVLSDIKELHQFVEQQERLLLGQLEQLDQEIVRRKEENVAKLLEEISSVSEQIRELEEKCQQPPCEFLQDSGNILSRLEKEKSQEVPEIWPEVEENPTRPPQRNTALKETLMQFRESLTLDPDTAHPRLVLSEDHKCVRWEETRHPVPDNPKRFDSSRCVLGCEGFIAGRHYWEVEVGDGEAWAVGVAKESVERKGRISVKPEVGIWAVGQCGAQYQALTSPTSPITLLAAPKVIGIYLDYEAGRVAFFDANNEVPIFTYPPTSFGGERVLPLLCLGRGCRFTLSP
SIO_010081: LOC110406682
subclass of: SO_0000673
so part of: LOC110406682
location: join(165124..165534,166000..166095,166387..166617,167122..167144,167487..167602,168099..168613)
location: region:165124-168613:1
so has part: feature:165124-165534:1:exon
so has part: feature:166000-166095:1:exon
so has part: feature:166387-166617:1:exon
so has part: feature:167122-167144:1:exon
so has part: feature:167487-167602:1:exon
so has part: feature:168099-168613:1:exon

XP_021269172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165124-165534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166000-166095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166387-166617:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167122-167144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167487-167602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168099-168613:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 169315..169386
location: region:169315-169386:1
so has part: feature:169315-169386:1:exon
subclass of: SO_0000663

110406720
type: Gene
SIO_000068: ncbigene

position:169315:1
position: 169315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169386:1
position: 169386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169315-169386:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:169348..169350,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 169315..169386
location: region:169315-169386:1
so has part: feature:169315-169386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169315-169386:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(169617..169689)
location: region:169617-169689:-1
so has part: feature:169617-169689:-1:exon
subclass of: SO_0000663

110406715
type: Gene
SIO_000068: ncbigene

position:169617:-1
position: 169617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169689:-1
position: 169689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169617-169689:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(169654..169656),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(169617..169689)
location: region:169617-169689:-1
so has part: feature:169617-169689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169617-169689:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 169923..169995
location: region:169923-169995:1
so has part: feature:169923-169995:1:exon
subclass of: SO_0000663

110406721
type: Gene
SIO_000068: ncbigene

position:169923:1
position: 169923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169995:1
position: 169995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169923-169995:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:169956..169958,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 169923..169995
location: region:169923-169995:1
so has part: feature:169923-169995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169923-169995:1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 170144..170248
location: region:170144-170248:1
so has part: feature:170144-170248:1:exon
subclass of: SO_0000663

110406722
type: Gene
SIO_000068: ncbigene

position:170144:1
position: 170144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170248:1
position: 170248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170144-170248:1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:170178..170180,aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: join(170144..170181,170204..170248)
location: region:170144-170248:1
so has part: feature:170144-170181:1:exon
so has part: feature:170204-170248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170144-170181:1:exon

position:170181:1
position: 170181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170204-170248:1:exon

position:170204:1
position: 170204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 170731..170803
location: region:170731-170803:1
so has part: feature:170731-170803:1:exon
subclass of: SO_0000663

110406702
type: Gene
SIO_000068: ncbigene

position:170731:1
position: 170731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170803:1
position: 170803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170731-170803:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:170764..170766,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 170731..170803
location: region:170731-170803:1
so has part: feature:170731-170803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170731-170803:1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(171028..171099)
location: region:171028-171099:-1
so has part: feature:171028-171099:-1:exon
subclass of: SO_0000663

110406716
type: Gene
SIO_000068: ncbigene

position:171028:-1
position: 171028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171099:-1
position: 171099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171028-171099:-1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(171064..171066),aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: complement(171028..171099)
location: region:171028-171099:-1
so has part: feature:171028-171099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171028-171099:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 171365..171436
location: region:171365-171436:1
so has part: feature:171365-171436:1:exon
subclass of: SO_0000663

110406703
type: Gene
SIO_000068: ncbigene

position:171365:1
position: 171365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171436:1
position: 171436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171365-171436:1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:171398..171400,aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: 171365..171436
location: region:171365-171436:1
so has part: feature:171365-171436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171365-171436:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 171871..171943
location: region:171871-171943:1
so has part: feature:171871-171943:1:exon
subclass of: SO_0000663

110406704
type: Gene
SIO_000068: ncbigene

position:171871:1
position: 171871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171943:1
position: 171943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171871-171943:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:171904..171906,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 171871..171943
location: region:171871-171943:1
so has part: feature:171871-171943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171871-171943:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 172185..172256
location: region:172185-172256:1
so has part: feature:172185-172256:1:exon
subclass of: SO_0000663

110406705
type: Gene
SIO_000068: ncbigene

position:172185:1
position: 172185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172256:1
position: 172256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172185-172256:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:172218..172220,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 172185..172256
location: region:172185-172256:1
so has part: feature:172185-172256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172185-172256:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 172584..172656
location: region:172584-172656:1
so has part: feature:172584-172656:1:exon
subclass of: SO_0000663

110406706
type: Gene
SIO_000068: ncbigene

position:172584:1
position: 172584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172656:1
position: 172656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172584-172656:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:172617..172619,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 172584..172656
location: region:172584-172656:1
so has part: feature:172584-172656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172584-172656:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 174033..174105
location: region:174033-174105:1
so has part: feature:174033-174105:1:exon
subclass of: SO_0000663

110406708
type: Gene
SIO_000068: ncbigene

position:174033:1
position: 174033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174105:1
position: 174105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174033-174105:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:174066..174068,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 174033..174105
location: region:174033-174105:1
so has part: feature:174033-174105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174033-174105:1:exon

LOC110406680
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 177393..185534
location: region:177393-185534:1
so has part: feature:177393-185534:1:exon
subclass of: SO_0000010

110406680
type: Gene
SIO_000068: ncbigene

position:177393:1
position: 177393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185534:1
position: 185534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177393-185534:1:exon

LOC110406680
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406680
product: tripartite motif-containing protein 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_021413495.1
SIO_010081: LOC110406680
subclass of: SO_0000673
so part of: LOC110406680
location: join(177393..177969,178812..178907,179292..179522,181346..181368,181796..181911,182479..182514,184360..185534)
location: region:177393-185534:1
so has part: feature:177393-177969:1:exon
so has part: feature:178812-178907:1:exon
so has part: feature:179292-179522:1:exon
so has part: feature:181346-181368:1:exon
so has part: feature:181796-181911:1:exon
so has part: feature:182479-182514:1:exon
so has part: feature:184360-185534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177393-177969:1:exon

position:177969:1
position: 177969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:178812-178907:1:exon

position:178812:1
position: 178812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178907:1
position: 178907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179292-179522:1:exon

position:179292:1
position: 179292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179522:1
position: 179522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181346-181368:1:exon

position:181346:1
position: 181346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181368:1
position: 181368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:181796-181911:1:exon

position:181796:1
position: 181796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181911:1
position: 181911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182479-182514:1:exon

position:182479:1
position: 182479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182514:1
position: 182514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:184360-185534:1:exon

position:184360:1
position: 184360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7-like
translation: MAAVFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIVKSWKDLEMDFPCPQCREVFQQKSLRPNRQLANMSEIISQFALRGAKGAEEDGLCAKHREALKLYCKDDRRTICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLKKERQELLEFKVNDDKKTQELLKTIETERQKLLVEFEGLRQFLHDQEHILLGQLDKMEKSISKRQNENITDLSKEITLLNKLITELEEKIQQPVLEFLKDVMNIISRSEEVKCQKPVPVCTDMKMHVCNFSLKTVVLEKVLKRFRENLRDELGRGEKEDLTLDPDSANHLLILSADLKSVRMGCRKQELPDNPKRFDTNSRVLASTGFKSGRHYWEVEVGASDGWAFGVAKESVRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLGQKLSKVRVYLDYEGEEVSFYNADNMQHIFTFNVAFREKVFPLFSVCSTVTYIKLCS
SIO_010081: LOC110406680
subclass of: SO_0000673
so part of: LOC110406680
location: join(177553..177969,178812..178907,179292..179522,181346..181368,181796..181911,182479..182514,184360..184874)
location: region:177553-184874:1
so has part: feature:177553-177969:1:exon
so has part: feature:178812-178907:1:exon
so has part: feature:179292-179522:1:exon
so has part: feature:181346-181368:1:exon
so has part: feature:181796-181911:1:exon
so has part: feature:182479-182514:1:exon
so has part: feature:184360-184874:1:exon

XP_021269170.1
type: Protein
SIO_000068: ncbiprotein

position:177553:1
position: 177553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184874:1
position: 184874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177553-177969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178812-178907:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179292-179522:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181346-181368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181796-181911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182479-182514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:184360-184874:1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 186036..186108
location: region:186036-186108:1
so has part: feature:186036-186108:1:exon
subclass of: SO_0000663

110406709
type: Gene
SIO_000068: ncbigene

position:186036:1
position: 186036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186108:1
position: 186108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186036-186108:1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:186069..186071,aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: 186036..186108
location: region:186036-186108:1
so has part: feature:186036-186108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186036-186108:1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 186267..186338
location: region:186267-186338:1
so has part: feature:186267-186338:1:exon
subclass of: SO_0000663

110406710
type: Gene
SIO_000068: ncbigene

position:186267:1
position: 186267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186338:1
position: 186338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186267-186338:1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:186299..186301,aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: 186267..186338
location: region:186267-186338:1
so has part: feature:186267-186338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186267-186338:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 186809..186881
location: region:186809-186881:1
so has part: feature:186809-186881:1:exon
subclass of: SO_0000663

110406711
type: Gene
SIO_000068: ncbigene

position:186809:1
position: 186809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186881:1
position: 186881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186809-186881:1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:186842..186844,aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: 186809..186881
location: region:186809-186881:1
so has part: feature:186809-186881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186809-186881:1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(187271..187352)
location: region:187271-187352:-1
so has part: feature:187271-187352:-1:exon
subclass of: SO_0000663

110406717
type: Gene
SIO_000068: ncbigene

position:187271:-1
position: 187271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187352:-1
position: 187352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187271-187352:-1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(187316..187318),aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: complement(187271..187352)
location: region:187271-187352:-1
so has part: feature:187271-187352:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187271-187352:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 187732..187804
location: region:187732-187804:1
so has part: feature:187732-187804:1:exon
subclass of: SO_0000663

110406712
type: Gene
SIO_000068: ncbigene

position:187732:1
position: 187732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187804:1
position: 187804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187732-187804:1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:187765..187767,aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: 187732..187804
location: region:187732-187804:1
so has part: feature:187732-187804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187732-187804:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 188067..188140
location: region:188067-188140:1
so has part: feature:188067-188140:1:exon
subclass of: SO_0000663

110406714
type: Gene
SIO_000068: ncbigene

position:188067:1
position: 188067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188140:1
position: 188140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188067-188140:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:188101..188103,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 188067..188140
location: region:188067-188140:1
so has part: feature:188067-188140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188067-188140:1:exon

IL4I1
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189362..194343)
location: region:189362-194343:-1
so has part: feature:189362-194343:-1:exon
subclass of: SO_0000010

110406676
type: Gene
SIO_000068: ncbigene

position:189362:-1
position: 189362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194343:-1
position: 194343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189362-194343:-1:exon

IL4I1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: IL4I1
product: interleukin 4 induced 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021413477.1
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: complement(join(189362..190537,190765..190901,191138..191206,191359..191560,192139..192245,192447..192661,194282..194343))
location: region:189362-194343:-1
so has part: feature:194282-194343:-1:exon
so has part: feature:192447-192661:-1:exon
so has part: feature:192139-192245:-1:exon
so has part: feature:191359-191560:-1:exon
so has part: feature:191138-191206:-1:exon
so has part: feature:190765-190901:-1:exon
so has part: feature:189362-190537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194282-194343:-1:exon

position:194282:-1
position: 194282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192447-192661:-1:exon

position:192447:-1
position: 192447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192661:-1
position: 192661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192139-192245:-1:exon

position:192139:-1
position: 192139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192245:-1
position: 192245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191359-191560:-1:exon

position:191359:-1
position: 191359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191560:-1
position: 191560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191138-191206:-1:exon

position:191138:-1
position: 191138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191206:-1
position: 191206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:190765-190901:-1:exon

position:190765:-1
position: 190765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190901:-1
position: 190901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:189362-190537:-1:exon

position:190537:-1
position: 190537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL4I1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-amino-acid oxidase
translation: MATMVLFQMLLLLGLASAKRFSCFPEYCLHDKDYKELLSIVKHGLEPATHPSNVVIVGAGISGLTAAKLLQDAGHKVTILETSNRVGGRIRTYREKDWYVELGAMRLPSKHRLVREFIRQFDLKLNPFRQTDDNAWYFVNGIRARVSEVNRNPDILNYTLSPSERGKSASQLYREALQSAFKEFQATNCKEYLAKHDSFSTKEYLIKVGNLSRGAVQMIGDLLNEDSGFYLSFLASLWDFDIFSTGESFDEITGGFDQLPKAFHKALPGVIKFNCTVEKIMTKGGKVRVFYRAPDTLASSIATADYVLVTSSAKATRHIQFFPPLSPAKSNALRSIHYASSSKIALACTEKFWEKDGIRGGQSITDRPSRFIYYPSHNFSSGVGVILASYTWNDDAEFLMPLADEKYLDVVLQDLADIHQVSKSYLQYTCDRYVIQKWQLDRHSLGAFAAFTPYQFTDYSQALFEHEGRVHFAGEHTAQPHAWIDTSMKAAVRAAGNIHDDSETRNLSHDHAHLEGFMEKGEL
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: complement(join(189709..190537,190765..190901,191138..191206,191359..191560,192139..192245,192447..192661,194282..194294))
location: region:189709-194294:-1
so has part: feature:194282-194294:-1:exon
so has part: feature:192447-192661:-1:exon
so has part: feature:192139-192245:-1:exon
so has part: feature:191359-191560:-1:exon
so has part: feature:191138-191206:-1:exon
so has part: feature:190765-190901:-1:exon
so has part: feature:189709-190537:-1:exon

XP_021269152.1
type: Protein
SIO_000068: ncbiprotein

position:189709:-1
position: 189709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194294:-1
position: 194294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194282-194294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192447-192661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192139-192245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191359-191560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191138-191206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190765-190901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189709-190537:-1:exon

LOC110406698
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 197493..198163
location: region:197493-198163:1
so has part: feature:197493-198163:1:exon
subclass of: SO_0000010

110406698
type: Gene
SIO_000068: ncbigene

position:197493:1
position: 197493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198163:1
position: 198163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197493-198163:1:exon

LOC110406698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406698
product: histone H2B.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413521.1
SIO_010081: LOC110406698
subclass of: SO_0000673
so part of: LOC110406698
location: 197493..198163
location: region:197493-198163:1
so has part: feature:197493-198163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197493-198163:1:exon

LOC110406698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B.1-like
translation: MVSAGGKKRRPQEGRRSRARGGPQKRTRQKTQSRRPPSKKVAFNGKTKQKPKDRQRRRGSSKAAFDPTKALKQDGRLLSREAKVLMAAFLRDVCRKVESEAERLRKESQRPVVGPAHVRAALHRVMPKNWKHAAGGR
SIO_010081: LOC110406698
subclass of: SO_0000673
so part of: LOC110406698
location: 197567..197980
location: region:197567-197980:1
so has part: feature:197567-197980:1:exon

XP_021269196.1
type: Protein
SIO_000068: ncbiprotein

position:197567:1
position: 197567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197980:1
position: 197980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197567-197980:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(198445..198516)
location: region:198445-198516:-1
so has part: feature:198445-198516:-1:exon
subclass of: SO_0000663

110406718
type: Gene
SIO_000068: ncbigene

position:198445:-1
position: 198445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198516:-1
position: 198516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198445-198516:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(198481..198483),aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(198445..198516)
location: region:198445-198516:-1
so has part: feature:198445-198516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198445-198516:-1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(198806..198910)
location: region:198806-198910:-1
so has part: feature:198806-198910:-1:exon
subclass of: SO_0000663

110406719
type: Gene
SIO_000068: ncbigene

position:198806:-1
position: 198806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198910:-1
position: 198910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198806-198910:-1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8996
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(198874..198876),aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: complement(join(198806..198851,198873..198910))
location: region:198806-198910:-1
so has part: feature:198873-198910:-1:exon
so has part: feature:198806-198851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198873-198910:-1:exon

position:198873:-1
position: 198873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198806-198851:-1:exon

position:198851:-1
position: 198851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406670
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<204626..209888)
location: region:204626-209888:-1
so has part: feature:204626-209888:-1:exon
subclass of: SO_0000010

110406670
type: Gene
SIO_000068: ncbigene

position:204626:-1
position: 204626
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:209888:-1
position: 209888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204626-209888:-1:exon

LOC110406670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406670
product: zinc finger protein 497-like, transcript variant X5
inference: similar to RNA sequence (same species):INSD:GBYG01036423.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 127 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021413468.1
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(<204626..206555,206834..206923,207195..207317,207809..207902,208336..209888))
location: region:204626-209888:-1
so has part: feature:208336-209888:-1:exon
so has part: feature:207809-207902:-1:exon
so has part: feature:207195-207317:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204626-206555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208336-209888:-1:exon

position:208336:-1
position: 208336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207809-207902:-1:exon

position:207809:-1
position: 207809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207902:-1
position: 207902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207195-207317:-1:exon

position:207195:-1
position: 207195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207317:-1
position: 207317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206834-206923:-1:exon

position:206834:-1
position: 206834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206923:-1
position: 206923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204626-206555:-1:exon

position:206555:-1
position: 206555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406670
product: zinc finger protein 497-like, transcript variant X4
inference: similar to RNA sequence (same species):INSD:GBYG01036423.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 127 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021413467.1
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(<204626..206555,206834..206923,207195..207317,207667..207711,207809..207902,208336..209888))
location: region:204626-209888:-1
so has part: feature:208336-209888:-1:exon
so has part: feature:207809-207902:-1:exon
so has part: feature:207667-207711:-1:exon
so has part: feature:207195-207317:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204626-206555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208336-209888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207809-207902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207667-207711:-1:exon

position:207667:-1
position: 207667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207711:-1
position: 207711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207195-207317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204626-206555:-1:exon

LOC110406670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406670
product: zinc finger protein 497-like, transcript variant X3
inference: similar to RNA sequence (same species):INSD:GBYG01036423.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 127 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_021413465.1
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(<204626..206555,206834..206923,207195..207317,207667..207739,207809..207902,208336..209888))
location: region:204626-209888:-1
so has part: feature:208336-209888:-1:exon
so has part: feature:207809-207902:-1:exon
so has part: feature:207667-207739:-1:exon
so has part: feature:207195-207317:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204626-206555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208336-209888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207809-207902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207667-207739:-1:exon

position:207739:-1
position: 207739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207195-207317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204626-206555:-1:exon

LOC110406670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406670
product: zinc finger protein 497-like, transcript variant X2
inference: similar to RNA sequence (same species):INSD:GBYG01036423.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 127 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_021413464.1
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(<204626..206555,206834..206923,207195..207317,207667..207742,207809..207902,208336..209888))
location: region:204626-209888:-1
so has part: feature:208336-209888:-1:exon
so has part: feature:207809-207902:-1:exon
so has part: feature:207667-207742:-1:exon
so has part: feature:207195-207317:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204626-206555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208336-209888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207809-207902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207667-207742:-1:exon

position:207742:-1
position: 207742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207195-207317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204626-206555:-1:exon

LOC110406670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406670
product: zinc finger protein 497-like, transcript variant X1
inference: similar to RNA sequence (same species):INSD:GBYG01036423.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 127 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_021413463.1
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(<204626..206555,206834..206923,207195..207317,207667..207902,208336..209888))
location: region:204626-209888:-1
so has part: feature:208336-209888:-1:exon
so has part: feature:207667-207902:-1:exon
so has part: feature:207195-207317:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204626-206555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208336-209888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207667-207902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207195-207317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204626-206555:-1:exon

LOC110406670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 497-like
translation: MEPYVLLDPRQRALYRDVMQESYETLMSLEFPISKPNLLSHGDESAALDLHVPKDTPQGDNGAAQETPQEDPKVNKPPDEGRPCSPTKGRSGETPHHRQAQPRAACGQCGKSFSHKSALVKHQKIHSGDRPHECPHCGKAFIQRSDLTIHQRVHTGERPYACPDCGRRFSVSSSLLTHQRTHVPGGEKPNRCPQCGRSFADAAALDRHRRSHLGGKPYECGVCGKAFAWSSHLERHRRIHTGEKPFQCAQCGRAFAWSSHLDRHMRTHVTVEEEEEEEEEEEEEEGGEDEDLPPPPQKCADCGKRLNHQTDPERFKHKGTQTSPTGDEDGPSITPTSPTGDEDGTSIIPVFPTVHEDGSSTMPTSPTGHEDGPSIIPTSPTGDEDGSSTAPIFPTEDEDGSSIAPTSPAGVEDGPSVAPSPCEQCGTPLAQSSDLNHQHIHPTTERPHTCPGCKRRFRWSPALTKHRRAHPEPHAEEPDAKPYPCGACGKTFGWLSHLERHRRVHTGEKPFRCGECGRAFAVSSHLERHRRVHTGERPYGCGDCGKSFAVSSTLRAHRRLHAAQPARPHQCHECGKGFGTAANLERHRRLHRGENPFQCGLCGKGFAWSSHYDRHRLTHTGEKPFSCAHCGKRFGRSSHRNRHQRAHAEKRPGRPQPAWGTQPAPLRGARGPSPASLLPSSPAPQELLPPPSS
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(204652..206555,206834..206923,207195..207282))
location: region:204652-207282:-1
so has part: feature:207195-207282:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204652-206555:-1:exon

XP_021269138.1
type: Protein
SIO_000068: ncbiprotein

position:204652:-1
position: 204652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207282:-1
position: 207282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207195-207282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204652-206555:-1:exon

LOC110406670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 497-like
translation: MEPYVLLDPRQRALYRDVMQESYETLMSLEFPISKPNLLSHGDESAALDLHVPKDTPQGDNGAAQETPQEDPKVNKPPDEGRPCSPTKGRSGETPHHRQAQPRAACGQCGKSFSHKSALVKHQKIHSGDRPHECPHCGKAFIQRSDLTIHQRVHTGERPYACPDCGRRFSVSSSLLTHQRTHVPGGEKPNRCPQCGRSFADAAALDRHRRSHLGGKPYECGVCGKAFAWSSHLERHRRIHTGEKPFQCAQCGRAFAWSSHLDRHMRTHVTVEEEEEEEEEEEEEEGGEDEDLPPPPQKCADCGKRLNHQTDPERFKHKGTQTSPTGDEDGPSITPTSPTGDEDGTSIIPVFPTVHEDGSSTMPTSPTGHEDGPSIIPTSPTGDEDGSSTAPIFPTEDEDGSSIAPTSPAGVEDGPSVAPSPCEQCGTPLAQSSDLNHQHIHPTTERPHTCPGCKRRFRWSPALTKHRRAHPEPHAEEPDAKPYPCGACGKTFGWLSHLERHRRVHTGEKPFRCGECGRAFAVSSHLERHRRVHTGERPYGCGDCGKSFAVSSTLRAHRRLHAAQPARPHQCHECGKGFGTAANLERHRRLHRGENPFQCGLCGKGFAWSSHYDRHRLTHTGEKPFSCAHCGKRFGRSSHRNRHQRAHAEKRPGRPQPAWGTQPAPLRGARGPSPASLLPSSPAPQELLPPPSS
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(204652..206555,206834..206923,207195..207282))
location: region:204652-207282:-1
so has part: feature:207195-207282:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204652-206555:-1:exon

XP_021269139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207195-207282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204652-206555:-1:exon

LOC110406670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 497-like
translation: MEPYVLLDPRQRALYRDVMQESYETLMSLEFPISKPNLLSHGDESAALDLHVPKDTPQGDNGAAQETPQEDPKVNKPPDEGRPCSPTKGRSGETPHHRQAQPRAACGQCGKSFSHKSALVKHQKIHSGDRPHECPHCGKAFIQRSDLTIHQRVHTGERPYACPDCGRRFSVSSSLLTHQRTHVPGGEKPNRCPQCGRSFADAAALDRHRRSHLGGKPYECGVCGKAFAWSSHLERHRRIHTGEKPFQCAQCGRAFAWSSHLDRHMRTHVTVEEEEEEEEEEEEEEGGEDEDLPPPPQKCADCGKRLNHQTDPERFKHKGTQTSPTGDEDGPSITPTSPTGDEDGTSIIPVFPTVHEDGSSTMPTSPTGHEDGPSIIPTSPTGDEDGSSTAPIFPTEDEDGSSIAPTSPAGVEDGPSVAPSPCEQCGTPLAQSSDLNHQHIHPTTERPHTCPGCKRRFRWSPALTKHRRAHPEPHAEEPDAKPYPCGACGKTFGWLSHLERHRRVHTGEKPFRCGECGRAFAVSSHLERHRRVHTGERPYGCGDCGKSFAVSSTLRAHRRLHAAQPARPHQCHECGKGFGTAANLERHRRLHRGENPFQCGLCGKGFAWSSHYDRHRLTHTGEKPFSCAHCGKRFGRSSHRNRHQRAHAEKRPGRPQPAWGTQPAPLRGARGPSPASLLPSSPAPQELLPPPSS
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(204652..206555,206834..206923,207195..207282))
location: region:204652-207282:-1
so has part: feature:207195-207282:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204652-206555:-1:exon

XP_021269140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207195-207282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204652-206555:-1:exon

LOC110406670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 497-like
translation: MEPYVLLDPRQRALYRDVMQESYETLMSLEFPISKPNLLSHGDESAALDLHVPKDTPQGDNGAAQETPQEDPKVNKPPDEGRPCSPTKGRSGETPHHRQAQPRAACGQCGKSFSHKSALVKHQKIHSGDRPHECPHCGKAFIQRSDLTIHQRVHTGERPYACPDCGRRFSVSSSLLTHQRTHVPGGEKPNRCPQCGRSFADAAALDRHRRSHLGGKPYECGVCGKAFAWSSHLERHRRIHTGEKPFQCAQCGRAFAWSSHLDRHMRTHVTVEEEEEEEEEEEEEEGGEDEDLPPPPQKCADCGKRLNHQTDPERFKHKGTQTSPTGDEDGPSITPTSPTGDEDGTSIIPVFPTVHEDGSSTMPTSPTGHEDGPSIIPTSPTGDEDGSSTAPIFPTEDEDGSSIAPTSPAGVEDGPSVAPSPCEQCGTPLAQSSDLNHQHIHPTTERPHTCPGCKRRFRWSPALTKHRRAHPEPHAEEPDAKPYPCGACGKTFGWLSHLERHRRVHTGEKPFRCGECGRAFAVSSHLERHRRVHTGERPYGCGDCGKSFAVSSTLRAHRRLHAAQPARPHQCHECGKGFGTAANLERHRRLHRGENPFQCGLCGKGFAWSSHYDRHRLTHTGEKPFSCAHCGKRFGRSSHRNRHQRAHAEKRPGRPQPAWGTQPAPLRGARGPSPASLLPSSPAPQELLPPPSS
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(204652..206555,206834..206923,207195..207282))
location: region:204652-207282:-1
so has part: feature:207195-207282:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204652-206555:-1:exon

XP_021269142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207195-207282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204652-206555:-1:exon

LOC110406670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 497-like
translation: MEPYVLLDPRQRALYRDVMQESYETLMSLEFPISKPNLLSHGDESAALDLHVPKDTPQGDNGAAQETPQEDPKVNKPPDEGRPCSPTKGRSGETPHHRQAQPRAACGQCGKSFSHKSALVKHQKIHSGDRPHECPHCGKAFIQRSDLTIHQRVHTGERPYACPDCGRRFSVSSSLLTHQRTHVPGGEKPNRCPQCGRSFADAAALDRHRRSHLGGKPYECGVCGKAFAWSSHLERHRRIHTGEKPFQCAQCGRAFAWSSHLDRHMRTHVTVEEEEEEEEEEEEEEGGEDEDLPPPPQKCADCGKRLNHQTDPERFKHKGTQTSPTGDEDGPSITPTSPTGDEDGTSIIPVFPTVHEDGSSTMPTSPTGHEDGPSIIPTSPTGDEDGSSTAPIFPTEDEDGSSIAPTSPAGVEDGPSVAPSPCEQCGTPLAQSSDLNHQHIHPTTERPHTCPGCKRRFRWSPALTKHRRAHPEPHAEEPDAKPYPCGACGKTFGWLSHLERHRRVHTGEKPFRCGECGRAFAVSSHLERHRRVHTGERPYGCGDCGKSFAVSSTLRAHRRLHAAQPARPHQCHECGKGFGTAANLERHRRLHRGENPFQCGLCGKGFAWSSHYDRHRLTHTGEKPFSCAHCGKRFGRSSHRNRHQRAHAEKRPGRPQPAWGTQPAPLRGARGPSPASLLPSSPAPQELLPPPSS
SIO_010081: LOC110406670
subclass of: SO_0000673
so part of: LOC110406670
location: complement(join(204652..206555,206834..206923,207195..207282))
location: region:204652-207282:-1
so has part: feature:207195-207282:-1:exon
so has part: feature:206834-206923:-1:exon
so has part: feature:204652-206555:-1:exon

XP_021269143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207195-207282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206834-206923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204652-206555:-1:exon

LOC110406674
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 210030..215083
location: region:210030-215083:1
so has part: feature:210030-215083:1:exon
subclass of: SO_0000010

110406674
type: Gene
SIO_000068: ncbigene

position:210030:1
position: 210030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215083:1
position: 215083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210030-215083:1:exon

LOC110406674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406674
product: tripartite motif-containing protein 7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_021413473.1
SIO_010081: LOC110406674
subclass of: SO_0000673
so part of: LOC110406674
location: join(210030..210615,211797..211883,212007..212234,212389..212507,212665..212780,212878..212910,213795..215083)
location: region:210030-215083:1
so has part: feature:210030-210615:1:exon
so has part: feature:211797-211883:1:exon
so has part: feature:212007-212234:1:exon
so has part: feature:212389-212507:1:exon
so has part: feature:212665-212780:1:exon
so has part: feature:212878-212910:1:exon
so has part: feature:213795-215083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210030-210615:1:exon

position:210615:1
position: 210615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211797-211883:1:exon

position:211797:1
position: 211797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211883:1
position: 211883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212007-212234:1:exon

position:212007:1
position: 212007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212234:1
position: 212234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:212389-212507:1:exon

position:212389:1
position: 212389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212507:1
position: 212507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212665-212780:1:exon

position:212665:1
position: 212665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212780:1
position: 212780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212878-212910:1:exon

position:212878:1
position: 212878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212910:1
position: 212910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:213795-215083:1:exon

position:213795:1
position: 213795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406674
product: tripartite motif-containing protein 7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_021413474.1
SIO_010081: LOC110406674
subclass of: SO_0000673
so part of: LOC110406674
location: join(210031..210615,211797..211883,212007..212234,212485..212507,212665..212780,212878..212910,213795..215083)
location: region:210031-215083:1
so has part: feature:210031-210615:1:exon
so has part: feature:211797-211883:1:exon
so has part: feature:212007-212234:1:exon
so has part: feature:212485-212507:1:exon
so has part: feature:212665-212780:1:exon
so has part: feature:212878-212910:1:exon
so has part: feature:213795-215083:1:exon

position:210031:1
position: 210031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210031-210615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211797-211883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212007-212234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212485-212507:1:exon

position:212485:1
position: 212485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212665-212780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212878-212910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213795-215083:1:exon

LOC110406674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7-like isoform X1
translation: MEAPPAPPAVPPAPCSAARSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVPQRLFRPNRSLGNIVHIVRQLGLPPGPADPPPGPPAPAPPLPAAAPPGPPGPPRCPRHGEPLRLFCVQDRRAVCVVCHLSREHRTHTVLPAEEAAHAAEEVPQEHLSSLRKGREEAKAERERQSEDLLKQTEVERQKIVAECKELRGFLEEKEQLLLSRLEELDRDIVKRRDESVSRLSEEIAQLDKLLGERGGENGPGNTAGQPLKQLLRADPLSNSGEDFEDFGTNRCCFSSLQAVTTAGSSFESWMFCKPEPGFAELEKKLKSFSQKSAVLKEVLLEFKENLRFELENDTGDLSLDPDTANPYLVLSEDKRSVRLRSAPQELPAHPKRFDYSFCVLAAEGFVAGRHYWEVEVGDGESWVLGAARESVRRKEKIDFAPEEGIWAVGLNWKGKNWDQYQAFTSPETPLSLCERPRKIGVYLDYEGGWVAFYNADNMAPIFTFTAAFTEKIFPFFWLFYVGSSLSLCN
SIO_010081: LOC110406674
subclass of: SO_0000673
so part of: LOC110406674
location: join(210103..210615,211797..211883,212007..212234,212389..212507,212665..212780,212878..212910,213795..214321)
location: region:210103-214321:1
so has part: feature:210103-210615:1:exon
so has part: feature:211797-211883:1:exon
so has part: feature:212007-212234:1:exon
so has part: feature:212389-212507:1:exon
so has part: feature:212665-212780:1:exon
so has part: feature:212878-212910:1:exon
so has part: feature:213795-214321:1:exon

XP_021269148.1
type: Protein
SIO_000068: ncbiprotein

position:210103:1
position: 210103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214321:1
position: 214321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210103-210615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211797-211883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212007-212234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212389-212507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212665-212780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212878-212910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213795-214321:1:exon

LOC110406674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7-like isoform X2
translation: MEAPPAPPAVPPAPCSAARSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVPQRLFRPNRSLGNIVHIVRQLGLPPGPADPPPGPPAPAPPLPAAAPPGPPGPPRCPRHGEPLRLFCVQDRRAVCVVCHLSREHRTHTVLPAEEAAHAAEEVPQEHLSSLRKGREEAKAERERQSEDLLKQTEVERQKIVAECKELRGFLEEKEQLLLSRLEELDRDIVKRRDESVSRLSEEIAQLDKLLGERGGENGPGNTAGQAVTTAGSSFESWMFCKPEPGFAELEKKLKSFSQKSAVLKEVLLEFKENLRFELENDTGDLSLDPDTANPYLVLSEDKRSVRLRSAPQELPAHPKRFDYSFCVLAAEGFVAGRHYWEVEVGDGESWVLGAARESVRRKEKIDFAPEEGIWAVGLNWKGKNWDQYQAFTSPETPLSLCERPRKIGVYLDYEGGWVAFYNADNMAPIFTFTAAFTEKIFPFFWLFYVGSSLSLCN
SIO_010081: LOC110406674
subclass of: SO_0000673
so part of: LOC110406674
location: join(210103..210615,211797..211883,212007..212234,212485..212507,212665..212780,212878..212910,213795..214321)
location: region:210103-214321:1
so has part: feature:210103-210615:1:exon
so has part: feature:211797-211883:1:exon
so has part: feature:212007-212234:1:exon
so has part: feature:212485-212507:1:exon
so has part: feature:212665-212780:1:exon
so has part: feature:212878-212910:1:exon
so has part: feature:213795-214321:1:exon

XP_021269149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210103-210615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211797-211883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212007-212234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212485-212507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212665-212780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212878-212910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213795-214321:1:exon

LOC110406699
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215222..223006)
location: region:215222-223006:-1
so has part: feature:215222-223006:-1:exon
subclass of: SO_0000010

110406699
type: Gene
SIO_000068: ncbigene

position:215222:-1
position: 215222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223006:-1
position: 223006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215222-223006:-1:exon

LOC110406699
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406699
product: zinc finger protein 692-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413523.1
SIO_010081: LOC110406699
subclass of: SO_0000673
so part of: LOC110406699
location: complement(join(215222..215985,216082..216181,216685..216799,217140..217218,217347..217409,219268..219396,219968..220117,220301..220349,220642..221031,221491..221522,221632..221795,222479..223006))
location: region:215222-223006:-1
so has part: feature:222479-223006:-1:exon
so has part: feature:221632-221795:-1:exon
so has part: feature:221491-221522:-1:exon
so has part: feature:220642-221031:-1:exon
so has part: feature:220301-220349:-1:exon
so has part: feature:219968-220117:-1:exon
so has part: feature:219268-219396:-1:exon
so has part: feature:217347-217409:-1:exon
so has part: feature:217140-217218:-1:exon
so has part: feature:216685-216799:-1:exon
so has part: feature:216082-216181:-1:exon
so has part: feature:215222-215985:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222479-223006:-1:exon

position:222479:-1
position: 222479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221632-221795:-1:exon

position:221632:-1
position: 221632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221795:-1
position: 221795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221491-221522:-1:exon

position:221491:-1
position: 221491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221522:-1
position: 221522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:220642-221031:-1:exon

position:220642:-1
position: 220642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221031:-1
position: 221031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:220301-220349:-1:exon

position:220301:-1
position: 220301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220349:-1
position: 220349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:219968-220117:-1:exon

position:219968:-1
position: 219968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220117:-1
position: 220117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:219268-219396:-1:exon

position:219268:-1
position: 219268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219396:-1
position: 219396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:217347-217409:-1:exon

position:217347:-1
position: 217347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217409:-1
position: 217409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217140-217218:-1:exon

position:217140:-1
position: 217140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217218:-1
position: 217218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:216685-216799:-1:exon

position:216685:-1
position: 216685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216799:-1
position: 216799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:216082-216181:-1:exon

position:216082:-1
position: 216082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216181:-1
position: 216181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:215222-215985:-1:exon

position:215985:-1
position: 215985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406699
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 692-like
translation: MAAPTQRENYNSHQPPREGAEAAQRACAFPEGGGGISAILQRSLSAGSRFLRLLKGARRRVGSHSRSGGAERGGGGRSPRAPDGDRRRKRRELDARRSKCRIRLGGHLEQWCRLKEQLGFALHSQLAKFLLDRYSSQGCAVGAAPRPADPNLLHADADALQRLVALSHGHSRECGFVPGVKPPAPGSPAPLVWECVAGHRFSWGVPNVGDVAERCDGAGGGSEQGSPPVPVRRRSLRRMGMVVEPTVEEPNAGKDDGVWSPGGDGDGGGGGDGAPRGQTEGETTAPEHESTPGLEEKAERRAAPQEEQEEEEEDEDFAEEDDLAYTDDLRDENYHPSQDSDSEPQRRQSQPHSRKKPVKEEQTPNEQNPIDPSSAEEKSGRVSCKQPTRPSDEDVAQIGPKRIRKAAKREILLCDFEGCGKIFSNRQYLNHHKKYQHVHQKTFTCSEPSCGKSFNFKKHLKEHEKLHSDKRDYICEFCARSFRTSSNLIIHRRIHTGEKPLQCEICGFTCRQKASLNWHMKKHDADAFYQFSCDLCGKKFEKKDNVTAHKSKSHPEAPGAAPQAVPSPPPAPGGAELPGGDAPSGAEQGDGHAPPAAAPDE
SIO_010081: LOC110406699
subclass of: SO_0000673
so part of: LOC110406699
location: complement(join(215685..215985,216082..216181,216685..216799,217140..217218,217347..217409,219268..219396,219968..220117,220301..220349,220642..221031,221491..221522,221632..221795,222479..222712))
location: region:215685-222712:-1
so has part: feature:222479-222712:-1:exon
so has part: feature:221632-221795:-1:exon
so has part: feature:221491-221522:-1:exon
so has part: feature:220642-221031:-1:exon
so has part: feature:220301-220349:-1:exon
so has part: feature:219968-220117:-1:exon
so has part: feature:219268-219396:-1:exon
so has part: feature:217347-217409:-1:exon
so has part: feature:217140-217218:-1:exon
so has part: feature:216685-216799:-1:exon
so has part: feature:216082-216181:-1:exon
so has part: feature:215685-215985:-1:exon

XP_021269198.1
type: Protein
SIO_000068: ncbiprotein

position:215685:-1
position: 215685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222712:-1
position: 222712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222479-222712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221632-221795:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221491-221522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220642-221031:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220301-220349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219968-220117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:219268-219396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217347-217409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217140-217218:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216685-216799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216082-216181:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215685-215985:-1:exon

LOC110406697
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 221254..225531
location: region:221254-225531:1
so has part: feature:221254-225531:1:exon
subclass of: SO_0000010

110406697
type: Gene
SIO_000068: ncbigene

position:221254:1
position: 221254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225531:1
position: 225531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221254-225531:1:exon

LOC110406697
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406697
product: C-type lectin domain family 2 member D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_021413519.1
SIO_010081: LOC110406697
subclass of: SO_0000673
so part of: LOC110406697
location: join(221254..221574,223362..223484,223972..224064,224461..224651,224707..224810,225055..225531)
location: region:221254-225531:1
so has part: feature:221254-221574:1:exon
so has part: feature:223362-223484:1:exon
so has part: feature:223972-224064:1:exon
so has part: feature:224461-224651:1:exon
so has part: feature:224707-224810:1:exon
so has part: feature:225055-225531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221254-221574:1:exon

position:221574:1
position: 221574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223362-223484:1:exon

position:223362:1
position: 223362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223484:1
position: 223484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223972-224064:1:exon

position:223972:1
position: 223972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224064:1
position: 224064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:224461-224651:1:exon

position:224461:1
position: 224461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224651:1
position: 224651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:224707-224810:1:exon

position:224707:1
position: 224707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224810:1
position: 224810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:225055-225531:1:exon

position:225055:1
position: 225055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110406697
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member D-like
translation: MDPHHGAKDASSRLKCIKDKLVPIAGTVLVAALLIAVIALAAQKRPSCSPCPTAGPLPPSCPPEWIGVGTQCFYFVEDPADWDGGQRFCLSRGARLAAVESPQELGFVLRYGRSVQYWLGLRRERSGLWMWSNGSRFNNTFSIAGSGHCAHTDGGGIGSDGCSRPKRSVCGRPQWGARGGTEP
SIO_010081: LOC110406697
subclass of: SO_0000673
so part of: LOC110406697
location: join(223454..223484,223972..224064,224461..224651,224707..224810,225055..225187)
location: region:223454-225187:1
so has part: feature:223454-223484:1:exon
so has part: feature:223972-224064:1:exon
so has part: feature:224461-224651:1:exon
so has part: feature:224707-224810:1:exon
so has part: feature:225055-225187:1:exon

XP_021269194.1
type: Protein
SIO_000068: ncbiprotein

position:223454:1
position: 223454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225187:1
position: 225187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223454-223484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223972-224064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224461-224651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224707-224810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225055-225187:1:exon

LOC110406672
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(226542..229880)
location: region:226542-229880:-1
so has part: feature:226542-229880:-1:exon
subclass of: SO_0000010

110406672
type: Gene
SIO_000068: ncbigene

position:226542:-1
position: 226542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229880:-1
position: 229880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226542-229880:-1:exon

LOC110406672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406672
product: carboxy-terminal kinesin 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021413470.1
SIO_010081: LOC110406672
subclass of: SO_0000673
so part of: LOC110406672
location: complement(join(226542..226626,226715..226854,227345..227483,227603..227767,227853..228026,228140..228256,228342..228470,228556..228798,228885..228999,229089..229395,229464..229551,229627..229880))
location: region:226542-229880:-1
so has part: feature:229627-229880:-1:exon
so has part: feature:229464-229551:-1:exon
so has part: feature:229089-229395:-1:exon
so has part: feature:228885-228999:-1:exon
so has part: feature:228556-228798:-1:exon
so has part: feature:228342-228470:-1:exon
so has part: feature:228140-228256:-1:exon
so has part: feature:227853-228026:-1:exon
so has part: feature:227603-227767:-1:exon
so has part: feature:227345-227483:-1:exon
so has part: feature:226715-226854:-1:exon
so has part: feature:226542-226626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229627-229880:-1:exon

position:229627:-1
position: 229627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229464-229551:-1:exon

position:229464:-1
position: 229464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229551:-1
position: 229551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:229089-229395:-1:exon

position:229089:-1
position: 229089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229395:-1
position: 229395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228885-228999:-1:exon

position:228885:-1
position: 228885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228999:-1
position: 228999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:228556-228798:-1:exon

position:228556:-1
position: 228556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228798:-1
position: 228798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:228342-228470:-1:exon

position:228342:-1
position: 228342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228470:-1
position: 228470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:228140-228256:-1:exon

position:228140:-1
position: 228140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228256:-1
position: 228256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:227853-228026:-1:exon

position:227853:-1
position: 227853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228026:-1
position: 228026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:227603-227767:-1:exon

position:227603:-1
position: 227603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227767:-1
position: 227767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:227345-227483:-1:exon

position:227345:-1
position: 227345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227483:-1
position: 227483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:226715-226854:-1:exon

position:226715:-1
position: 226715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226854:-1
position: 226854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:226542-226626:-1:exon

position:226626:-1
position: 226626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxy-terminal kinesin 2-like
translation: MAAVASGGSAGSAPGMAVVAPLPVPAPTSRLPVRRAAAKRAAPGPQPAAPEQKRARSGPTSSQPPGRAPLRALSVPAAPGPGPPRKAMTVSAAPRAGKGTCGAAPATAAASCAGAAPVGGAHRRRAAWDLKGQVSDLRAALGNQKEKAQRLDGENRQLREQLRELQETLRERERRAEELDGRVSALGTELEQHRKESEQRGRELQELREAGKELTARLETTEAQLHQAKAALAQSDSEVAELRVRAESQARRLREQEAQYEAEVAELKEQTQSQSQRLREQEERQHALEMERRRLHNLVQELKGNIRVFCRVRPLLAAEEEKQKGMEHLQFPPHDNKTLVLLREEESHIGRERKDDVKYDFSFDRVFPPGASQEEVFEEISLLVQSALDGYHVCIFAYGQTGSGKTYTMEGPDALDPERRGMIPRAVRQVFQGAQELAEKGWQYRFSASFLEIYNESLRDLLGARPERGELEIRRVSSTSEELHVPNLRCVPVASEDEVLQLLQTAAANRSVARTALNDHSSRSHSIFQLRIDGTNAARELRCSSVLSLVDLAGSERLDKSQSQGKRLRETQAINTSLSSLGLVIMALAKKEPHVPYRNSKLTYLLQNSLGGSAKM
SIO_010081: LOC110406672
subclass of: SO_0000673
so part of: LOC110406672
location: complement(join(226549..226626,226715..226854,227345..227483,227603..227767,227853..228026,228140..228256,228342..228470,228556..228798,228885..228999,229089..229395,229464..229551,229627..229782))
location: region:226549-229782:-1
so has part: feature:229627-229782:-1:exon
so has part: feature:229464-229551:-1:exon
so has part: feature:229089-229395:-1:exon
so has part: feature:228885-228999:-1:exon
so has part: feature:228556-228798:-1:exon
so has part: feature:228342-228470:-1:exon
so has part: feature:228140-228256:-1:exon
so has part: feature:227853-228026:-1:exon
so has part: feature:227603-227767:-1:exon
so has part: feature:227345-227483:-1:exon
so has part: feature:226715-226854:-1:exon
so has part: feature:226549-226626:-1:exon

XP_021269145.1
type: Protein
SIO_000068: ncbiprotein

position:226549:-1
position: 226549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229782:-1
position: 229782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229627-229782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229464-229551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229089-229395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228885-228999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228556-228798:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228342-228470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228140-228256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227853-228026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227603-227767:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227345-227483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226715-226854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226549-226626:-1:exon

LOC110406686
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(234610..241699)
location: region:234610-241699:-1
so has part: feature:234610-241699:-1:exon
subclass of: SO_0000010

110406686
type: Gene
SIO_000068: ncbigene

position:234610:-1
position: 234610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241699:-1
position: 241699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234610-241699:-1:exon

LOC110406686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406686
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_021413504.1
SIO_010081: LOC110406686
subclass of: SO_0000673
so part of: LOC110406686
location: complement(join(234610..234947,235372..235713,236067..236196,236589..239026))
location: region:234610-239026:-1
so has part: feature:236589-239026:-1:exon
so has part: feature:236067-236196:-1:exon
so has part: feature:235372-235713:-1:exon
so has part: feature:234610-234947:-1:exon

position:239026:-1
position: 239026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236589-239026:-1:exon

position:236589:-1
position: 236589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236067-236196:-1:exon

position:236067:-1
position: 236067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236196:-1
position: 236196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235372-235713:-1:exon

position:235372:-1
position: 235372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235713:-1
position: 235713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234610-234947:-1:exon

position:234947:-1
position: 234947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like isoform X1
translation: MLGYLKISNEQRNHCTLGIAQSKLLEHSPQISPLLWQCFCWVRVPGACREPGHCRKLQWDVFNVLQPLPVLIHGQVPPTAPWSWAKVGEAGCGHMLPAAQLLPPSSSPAQMRFRSGCNHPASALTWRSLLPPLLALHLLRPGSAQIRVVAPSPRVMANVGQDVVLRCHLSPCKDAWSLDIRWIQHRSSGLVHHYQDGFDLEQMEEYKGRTELLRNGLSDGNLDLRITAVTSSDSGSYTCAVQDGDGYAEAVVNLEVSDPFFQIVRSWAAALAVVITLLLGSSVIIAFLQRKRGELREEGMECREVLRETGMVGVVLSSCPSRRMKGDFP
SIO_010081: LOC110406686
subclass of: SO_0000673
so part of: LOC110406686
location: complement(join(234730..234947,235372..235713,236067..236196,236589..236888))
location: region:234730-236888:-1
so has part: feature:236589-236888:-1:exon
so has part: feature:236067-236196:-1:exon
so has part: feature:235372-235713:-1:exon
so has part: feature:234730-234947:-1:exon

XP_021269179.1
type: Protein
SIO_000068: ncbiprotein

position:234730:-1
position: 234730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236888:-1
position: 236888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236589-236888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236067-236196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235372-235713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234730-234947:-1:exon

LOC110406686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406686
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021413506.1
SIO_010081: LOC110406686
subclass of: SO_0000673
so part of: LOC110406686
location: complement(join(235695..235713,236067..236415,236589..239039,239143..239163,239274..239543,239654..239674,239778..239798,239906..239926,240024..240044,240763..240783,240890..240910,241018..241038,241141..241161,241268..241408))
location: region:235695-241408:-1
so has part: feature:241268-241408:-1:exon
so has part: feature:241141-241161:-1:exon
so has part: feature:241018-241038:-1:exon
so has part: feature:240890-240910:-1:exon
so has part: feature:240763-240783:-1:exon
so has part: feature:240024-240044:-1:exon
so has part: feature:239906-239926:-1:exon
so has part: feature:239778-239798:-1:exon
so has part: feature:239654-239674:-1:exon
so has part: feature:239274-239543:-1:exon
so has part: feature:239143-239163:-1:exon
so has part: feature:236589-239039:-1:exon
so has part: feature:236067-236415:-1:exon
so has part: feature:235695-235713:-1:exon

position:235695:-1
position: 235695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241408:-1
position: 241408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241268-241408:-1:exon

position:241268:-1
position: 241268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241141-241161:-1:exon

position:241141:-1
position: 241141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241161:-1
position: 241161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241018-241038:-1:exon

position:241018:-1
position: 241018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241038:-1
position: 241038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240890-240910:-1:exon

position:240890:-1
position: 240890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240910:-1
position: 240910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240763-240783:-1:exon

position:240763:-1
position: 240763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240783:-1
position: 240783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:240024-240044:-1:exon

position:240024:-1
position: 240024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240044:-1
position: 240044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:239906-239926:-1:exon

position:239906:-1
position: 239906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239926:-1
position: 239926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:239778-239798:-1:exon

position:239778:-1
position: 239778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239798:-1
position: 239798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:239654-239674:-1:exon

position:239654:-1
position: 239654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239674:-1
position: 239674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:239274-239543:-1:exon

position:239274:-1
position: 239274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239543:-1
position: 239543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:239143-239163:-1:exon

position:239143:-1
position: 239143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239163:-1
position: 239163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:236589-239039:-1:exon

position:239039:-1
position: 239039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:236067-236415:-1:exon

position:236415:-1
position: 236415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:235695-235713:-1:exon

LOC110406686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110406686 isoform X3
translation: MIIRPVSSCISDLFLSFAEKLAAELVKRTKEVEKKNSQLKKHCEDMEEQRKKSVEYTEYLEYWNSLLKHSLKMMGFSAADFMKEVAELGESNLQN
SIO_010081: LOC110406686
subclass of: SO_0000673
so part of: LOC110406686
location: complement(join(239500..239543,239654..239674,239778..239798,239906..239926,240024..240044,240763..240783,240890..240910,241018..241038,241141..241161,241268..241343))
location: region:239500-241343:-1
so has part: feature:241268-241343:-1:exon
so has part: feature:241141-241161:-1:exon
so has part: feature:241018-241038:-1:exon
so has part: feature:240890-240910:-1:exon
so has part: feature:240763-240783:-1:exon
so has part: feature:240024-240044:-1:exon
so has part: feature:239906-239926:-1:exon
so has part: feature:239778-239798:-1:exon
so has part: feature:239654-239674:-1:exon
so has part: feature:239500-239543:-1:exon

XP_021269181.1
type: Protein
SIO_000068: ncbiprotein

position:239500:-1
position: 239500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241343:-1
position: 241343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241268-241343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241141-241161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241018-241038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240890-240910:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240763-240783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240024-240044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:239906-239926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239778-239798:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239654-239674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:239500-239543:-1:exon

LOC110406686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406686
product: myelin-oligodendrocyte glycoprotein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021413505.1
SIO_010081: LOC110406686
subclass of: SO_0000673
so part of: LOC110406686
location: complement(join(240226..240783,240890..240910,241018..241038,241141..241161,241268..241288,241525..241699))
location: region:240226-241699:-1
so has part: feature:241525-241699:-1:exon
so has part: feature:241268-241288:-1:exon
so has part: feature:241141-241161:-1:exon
so has part: feature:241018-241038:-1:exon
so has part: feature:240890-240910:-1:exon
so has part: feature:240226-240783:-1:exon

position:240226:-1
position: 240226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241525-241699:-1:exon

position:241525:-1
position: 241525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241268-241288:-1:exon

position:241288:-1
position: 241288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241141-241161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241018-241038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240890-240910:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240226-240783:-1:exon

LOC110406686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110406686 isoform X2
translation: MHSWVSLLPQSEGIQGLSMALLWDEQLFLLTMHCSSLSFPAEQAAILEKLAAELVKRTKEVEKKNSQLKKHCEDMEEQRKKSGEFSFLNQRDLGFPMG
SIO_010081: LOC110406686
subclass of: SO_0000673
so part of: LOC110406686
location: complement(join(240713..240783,240890..240910,241018..241038,241141..241161,241268..241288,241525..241666))
location: region:240713-241666:-1
so has part: feature:241525-241666:-1:exon
so has part: feature:241268-241288:-1:exon
so has part: feature:241141-241161:-1:exon
so has part: feature:241018-241038:-1:exon
so has part: feature:240890-240910:-1:exon
so has part: feature:240713-240783:-1:exon

XP_021269180.1
type: Protein
SIO_000068: ncbiprotein

position:240713:-1
position: 240713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241666:-1
position: 241666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241525-241666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241268-241288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241141-241161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241018-241038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240890-240910:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240713-240783:-1:exon

LOC110406692
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(241941..244836)
location: region:241941-244836:-1
so has part: feature:241941-244836:-1:exon
subclass of: SO_0000010

110406692
type: Gene
SIO_000068: ncbigene

position:241941:-1
position: 241941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244836:-1
position: 244836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241941-244836:-1:exon

LOC110406692
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406692
product: myelin-oligodendrocyte glycoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021413512.1
SIO_010081: LOC110406692
subclass of: SO_0000673
so part of: LOC110406692
location: complement(join(241941..242062,242375..242479,242904..244836))
location: region:241941-244836:-1
so has part: feature:242904-244836:-1:exon
so has part: feature:242375-242479:-1:exon
so has part: feature:241941-242062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242904-244836:-1:exon

position:242904:-1
position: 242904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242375-242479:-1:exon

position:242375:-1
position: 242375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242479:-1
position: 242479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241941-242062:-1:exon

position:242062:-1
position: 242062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406692
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like
translation: MKRVILGRISISSSPPTHVVSGLPPPGILPHSLLFPLQLLHMGCSTQHLPLCRSLPPHERRHHLTVSPCPSHCTAQFRVVAPRLHVMATVGQDVVLRCHLSPCKDAWSSDIRWIQHRSSGLVHHYQDGVVLKQMEEYKGRTELLRDGLSDGNLDLRITDVTSSDSSSYSCILEDVDGYAEAVVNLEVSDPFSQIIHSWAAALAVVLTLLLGSFVIIAFLHRKQVAQHRELSESLQPHPPPKSLEWN
SIO_010081: LOC110406692
subclass of: SO_0000673
so part of: LOC110406692
location: complement(join(241992..242062,242375..242479,242904..243468))
location: region:241992-243468:-1
so has part: feature:242904-243468:-1:exon
so has part: feature:242375-242479:-1:exon
so has part: feature:241992-242062:-1:exon

XP_021269187.1
type: Protein
SIO_000068: ncbiprotein

position:241992:-1
position: 241992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243468:-1
position: 243468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242904-243468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242375-242479:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241992-242062:-1:exon

LOC110406663
type: Gene
subclass of: SO_0000704
RO_0002162: 8996
gene: LOC110406663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<249981..252162)
location: region:249981-252162:-1
so has part: feature:249981-252162:-1:exon
subclass of: SO_0000010

110406663
type: Gene
SIO_000068: ncbigene

position:249981:-1
position: 249981
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:252162:-1
position: 252162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249981-252162:-1:exon

LOC110406663
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8996
gene: LOC110406663
product: myelin-oligodendrocyte glycoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021413453.1
SIO_010081: LOC110406663
subclass of: SO_0000673
so part of: LOC110406663
location: complement(join(<249981..250126,250546..250887,251184..251341,251610..252162))
location: region:249981-252162:-1
so has part: feature:251610-252162:-1:exon
so has part: feature:251184-251341:-1:exon
so has part: feature:250546-250887:-1:exon
so has part: feature:249981-250126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251610-252162:-1:exon

position:251610:-1
position: 251610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:251184-251341:-1:exon

position:251184:-1
position: 251184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251341:-1
position: 251341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250546-250887:-1:exon

position:250546:-1
position: 250546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250887:-1
position: 250887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249981-250126:-1:exon

position:250126:-1
position: 250126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110406663
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8996
gene: LOC110406663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like
translation: MANFLLLHPGAGQRQEKLGIAVRFLQLSISFSLSFLSLLPPPSSPAQMRFGSGCKHITSTLPWRNLLPHLLALLLLRPGSAQIRMVAPSLRVTAIVGQDVVLRCHLSPCKDARSLDIRWIQDRSSGIVHHYQDGEDLDQMEEYKGRTELLRNGLSDGNLDLRITAVTSSDSGSYICAVQDADGYADEMVNLEVSDPCSPVVHPWMVALAVVVTLLLGSFVIIVFLHRKRGELRAEGMERREVL
SIO_010081: LOC110406663
subclass of: SO_0000673
so part of: LOC110406663
location: complement(join(<249981..250126,250546..250887,251184..251341,251610..251692))
location: region:249981-251692:-1
so has part: feature:251610-251692:-1:exon
so has part: feature:251184-251341:-1:exon
so has part: feature:250546-250887:-1:exon
so has part: feature:249981-250126:-1:exon

XP_021269128.1
type: Protein
SIO_000068: ncbiprotein

position:251692:-1
position: 251692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251610-251692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251184-251341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250546-250887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249981-250126:-1:exon