Accipiter gentilis chromosome 32, bAccGen1.1, whole genome shotgun sequence.
type: Entry
definition: Accipiter gentilis chromosome 32, bAccGen1.1, whole genome shotgun sequence.
sequence version: NC_064911.1
sequence date: 2023-02-27
sequence: sequence
division: CON
label: NC_064911.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA862859
dblink: SAMEA8235650
keyword: WGS
keyword: RefSeq
source: Accipiter gentilis (Northern goshawk)
organism: Accipiter gentilis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nOV839393.1.\nAssembly name: bAccGen1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the WELLCOME SANGER INSTITUTE on\n2022/02/09. The original whole-genome shotgun project has the\naccession CAKNBG000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_929443795.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/26/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21169547
topology: linear
so has quality: SO_0000987
location: 1..21169547
location: region:1-21169547:1
RO_0002162: 8957

NC_064911
type: RefSeq
SIO_000068: refseq

PRJNA862859
type: BioProject
SIO_000068: bioproject

SAMEA8235650
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21169547:1
position: 21169547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21169547:1:source
so part of: sequence
organism: Accipiter gentilis
mol type: genomic DNA
chromosome: 32

8957
type: Taxonomy
SIO_000068: taxonomy

MRPL39
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: MRPL39
note: mitochondrial ribosomal protein L39; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1248136..1266471)
location: region:1248136-1266471:-1
so has part: feature:1248136-1266471:-1:exon
subclass of: SO_0000010

126053239
type: Gene
SIO_000068: ncbigene

position:1248136:-1
position: 1248136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266471:-1
position: 1266471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248136-1266471:-1:exon

MRPL39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: MRPL39
product: mitochondrial ribosomal protein L39, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835166.1
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(1248136..1248264,1249496..1249543,1251549..1251702,1252925..1252990,1261812..1261924,1263224..1263291,1264572..1264671,1265143..1265282,1265628..1265834,1266362..1266471))
location: region:1248136-1266471:-1
so has part: feature:1266362-1266471:-1:exon
so has part: feature:1265628-1265834:-1:exon
so has part: feature:1265143-1265282:-1:exon
so has part: feature:1264572-1264671:-1:exon
so has part: feature:1263224-1263291:-1:exon
so has part: feature:1261812-1261924:-1:exon
so has part: feature:1252925-1252990:-1:exon
so has part: feature:1251549-1251702:-1:exon
so has part: feature:1249496-1249543:-1:exon
so has part: feature:1248136-1248264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1266362-1266471:-1:exon

position:1266362:-1
position: 1266362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265628-1265834:-1:exon

position:1265628:-1
position: 1265628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265834:-1
position: 1265834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1265143-1265282:-1:exon

position:1265143:-1
position: 1265143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265282:-1
position: 1265282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1264572-1264671:-1:exon

position:1264572:-1
position: 1264572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264671:-1
position: 1264671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1263224-1263291:-1:exon

position:1263224:-1
position: 1263224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263291:-1
position: 1263291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1261812-1261924:-1:exon

position:1261812:-1
position: 1261812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261924:-1
position: 1261924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1252925-1252990:-1:exon

position:1252925:-1
position: 1252925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252990:-1
position: 1252990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1251549-1251702:-1:exon

position:1251549:-1
position: 1251549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251702:-1
position: 1251702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1249496-1249543:-1:exon

position:1249496:-1
position: 1249496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249543:-1
position: 1249543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1248136-1248264:-1:exon

position:1248264:-1
position: 1248264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: MRPL39
product: mitochondrial ribosomal protein L39, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835167.1
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(1248136..1248264,1249496..1249543,1251549..1251702,1252925..1252990,1261812..1261924,1263224..1263291,1264572..1264671,1265143..1265282,1265628..1265834,1266318..1266422))
location: region:1248136-1266422:-1
so has part: feature:1266318-1266422:-1:exon
so has part: feature:1265628-1265834:-1:exon
so has part: feature:1265143-1265282:-1:exon
so has part: feature:1264572-1264671:-1:exon
so has part: feature:1263224-1263291:-1:exon
so has part: feature:1261812-1261924:-1:exon
so has part: feature:1252925-1252990:-1:exon
so has part: feature:1251549-1251702:-1:exon
so has part: feature:1249496-1249543:-1:exon
so has part: feature:1248136-1248264:-1:exon

position:1266422:-1
position: 1266422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1266318-1266422:-1:exon

position:1266318:-1
position: 1266318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265628-1265834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1265143-1265282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1264572-1264671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1263224-1263291:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1261812-1261924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1252925-1252990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251549-1251702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1249496-1249543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1248136-1248264:-1:exon

MRPL39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: MRPL39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L39, mitochondrial isoform X1
translation: MAARWAARCLRGGREGRRFISTPAVSRLTSDEVIQMRNELFTKEKERQLSLHPRIEKIEVKYTGKSHPGSVFVMNKALSTPYNCAMHLSEWHCKKSILALVDGQVWDMYRPLTKSCEIQFLTFKDDDPEEVNKAYWRSCAMIMACVLKRAFKDEYSVNLTKAPEVPVISGAFCYDVILDNKLNDWKPTNDNFRSLTRDARKLIDKDLPFETLHVEVKVAREMFQHNRYKMEMIEQKASQNMEGIVTLHRFGDFVDVSEGPHIPRTSFCFQYEITAAHNLQTNQSELIRRFQGVSLPIHLKAHHTVWHKLLERSKRLVTEEKYWEAAAECHEPKDRTEEGKTVSI
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(1248178..1248264,1249496..1249543,1251549..1251702,1252925..1252990,1261812..1261924,1263224..1263291,1264572..1264671,1265143..1265282,1265628..1265834,1266362..1266413))
location: region:1248178-1266413:-1
so has part: feature:1266362-1266413:-1:exon
so has part: feature:1265628-1265834:-1:exon
so has part: feature:1265143-1265282:-1:exon
so has part: feature:1264572-1264671:-1:exon
so has part: feature:1263224-1263291:-1:exon
so has part: feature:1261812-1261924:-1:exon
so has part: feature:1252925-1252990:-1:exon
so has part: feature:1251549-1251702:-1:exon
so has part: feature:1249496-1249543:-1:exon
so has part: feature:1248178-1248264:-1:exon

XP_049691123.1
type: Protein
SIO_000068: ncbiprotein

position:1248178:-1
position: 1248178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266413:-1
position: 1266413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1266362-1266413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265628-1265834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1265143-1265282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1264572-1264671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1263224-1263291:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1261812-1261924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1252925-1252990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251549-1251702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1249496-1249543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1248178-1248264:-1:exon

MRPL39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: MRPL39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L39, mitochondrial isoform X2
translation: MRNELFTKEKERQLSLHPRIEKIEVKYTGKSHPGSVFVMNKALSTPYNCAMHLSEWHCKKSILALVDGQVWDMYRPLTKSCEIQFLTFKDDDPEEVNKAYWRSCAMIMACVLKRAFKDEYSVNLTKAPEVPVISGAFCYDVILDNKLNDWKPTNDNFRSLTRDARKLIDKDLPFETLHVEVKVAREMFQHNRYKMEMIEQKASQNMEGIVTLHRFGDFVDVSEGPHIPRTSFCFQYEITAAHNLQTNQSELIRRFQGVSLPIHLKAHHTVWHKLLERSKRLVTEEKYWEAAAECHEPKDRTEEGKTVSI
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(1248178..1248264,1249496..1249543,1251549..1251702,1252925..1252990,1261812..1261924,1263224..1263291,1264572..1264671,1265143..1265282,1265628..1265781))
location: region:1248178-1265781:-1
so has part: feature:1265628-1265781:-1:exon
so has part: feature:1265143-1265282:-1:exon
so has part: feature:1264572-1264671:-1:exon
so has part: feature:1263224-1263291:-1:exon
so has part: feature:1261812-1261924:-1:exon
so has part: feature:1252925-1252990:-1:exon
so has part: feature:1251549-1251702:-1:exon
so has part: feature:1249496-1249543:-1:exon
so has part: feature:1248178-1248264:-1:exon

XP_049691124.1
type: Protein
SIO_000068: ncbiprotein

position:1265781:-1
position: 1265781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265628-1265781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265143-1265282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264572-1264671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1263224-1263291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1261812-1261924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252925-1252990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1251549-1251702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1249496-1249543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1248178-1248264:-1:exon

JAM2
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: JAM2
note: junctional adhesion molecule 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1275845..1316275
location: region:1275845-1316275:1
so has part: feature:1275845-1316275:1:exon
subclass of: SO_0000010

126053240
type: Gene
SIO_000068: ncbigene

position:1275845:1
position: 1275845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316275:1
position: 1316275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275845-1316275:1:exon

JAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: JAM2
product: junctional adhesion molecule 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835168.1
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(1275845..1276011,1300399..1300464,1304825..1304938,1306163..1306315,1309133..1309338,1310802..1310904,1312507..1312614,1313426..1313441,1314366..1314396,1315545..1316275)
location: region:1275845-1316275:1
so has part: feature:1275845-1276011:1:exon
so has part: feature:1300399-1300464:1:exon
so has part: feature:1304825-1304938:1:exon
so has part: feature:1306163-1306315:1:exon
so has part: feature:1309133-1309338:1:exon
so has part: feature:1310802-1310904:1:exon
so has part: feature:1312507-1312614:1:exon
so has part: feature:1313426-1313441:1:exon
so has part: feature:1314366-1314396:1:exon
so has part: feature:1315545-1316275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1275845-1276011:1:exon

position:1276011:1
position: 1276011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1300399-1300464:1:exon

position:1300399:1
position: 1300399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300464:1
position: 1300464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1304825-1304938:1:exon

position:1304825:1
position: 1304825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304938:1
position: 1304938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1306163-1306315:1:exon

position:1306163:1
position: 1306163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306315:1
position: 1306315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1309133-1309338:1:exon

position:1309133:1
position: 1309133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1309338:1
position: 1309338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1310802-1310904:1:exon

position:1310802:1
position: 1310802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310904:1
position: 1310904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1312507-1312614:1:exon

position:1312507:1
position: 1312507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312614:1
position: 1312614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1313426-1313441:1:exon

position:1313426:1
position: 1313426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313441:1
position: 1313441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1314366-1314396:1:exon

position:1314366:1
position: 1314366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314396:1
position: 1314396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1315545-1316275:1:exon

position:1315545:1
position: 1315545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: JAM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctional adhesion molecule B
translation: MASRSLRLLLFGYLGVLSYRRASGISIETDNKNVKAEEFKEAILSCKHKFSKGMSLRIEWKKIQSQGVSFVYYNGEFTGDLRGRAEMLNTGIRIRNVTRKDSGTYRCEISAKSEEGQRLGEATITLTVLVAPTMPVCEVPSSAVTGTVVELSCKETEGSPPSEYQWYKNGVALLEKTGTGSARAANITYTMNKKSGTLLFNTVTKNDTGEYFCEASNGIGLSQKCSVKRMQVDDLNVSGIIAAVVFVALVMALCGLGVFYAQKKGYFTKQSSSQKTNYRSTSEKDFKHTKSFVI
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(1275957..1276011,1300399..1300464,1304825..1304938,1306163..1306315,1309133..1309338,1310802..1310904,1312507..1312614,1313426..1313441,1314366..1314396,1315545..1315577)
location: region:1275957-1315577:1
so has part: feature:1275957-1276011:1:exon
so has part: feature:1300399-1300464:1:exon
so has part: feature:1304825-1304938:1:exon
so has part: feature:1306163-1306315:1:exon
so has part: feature:1309133-1309338:1:exon
so has part: feature:1310802-1310904:1:exon
so has part: feature:1312507-1312614:1:exon
so has part: feature:1313426-1313441:1:exon
so has part: feature:1314366-1314396:1:exon
so has part: feature:1315545-1315577:1:exon

XP_049691125.1
type: Protein
SIO_000068: ncbiprotein

position:1275957:1
position: 1275957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315577:1
position: 1315577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275957-1276011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1300399-1300464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1304825-1304938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306163-1306315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1309133-1309338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1310802-1310904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1312507-1312614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1313426-1313441:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1314366-1314396:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1315545-1315577:1:exon

ATP5PF
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: ATP5PF
note: ATP synthase peripheral stalk subunit F6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1316749..1321430)
location: region:1316749-1321430:-1
so has part: feature:1316749-1321430:-1:exon
subclass of: SO_0000010

126053243
type: Gene
SIO_000068: ncbigene

position:1316749:-1
position: 1316749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321430:-1
position: 1321430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1316749-1321430:-1:exon

ATP5PF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: ATP5PF
product: ATP synthase peripheral stalk subunit F6, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835177.1
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(1316749..1316869,1319079..1319203,1320470..1320658,1321407..1321430))
location: region:1316749-1321430:-1
so has part: feature:1321407-1321430:-1:exon
so has part: feature:1320470-1320658:-1:exon
so has part: feature:1319079-1319203:-1:exon
so has part: feature:1316749-1316869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321407-1321430:-1:exon

position:1321407:-1
position: 1321407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1320470-1320658:-1:exon

position:1320470:-1
position: 1320470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320658:-1
position: 1320658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1319079-1319203:-1:exon

position:1319079:-1
position: 1319079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319203:-1
position: 1319203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1316749-1316869:-1:exon

position:1316869:-1
position: 1316869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5PF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: ATP5PF
product: ATP synthase peripheral stalk subunit F6, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835173.1
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(1316749..1316869,1319079..1319203,1320470..1320658,1321166..1321239))
location: region:1316749-1321239:-1
so has part: feature:1321166-1321239:-1:exon
so has part: feature:1320470-1320658:-1:exon
so has part: feature:1319079-1319203:-1:exon
so has part: feature:1316749-1316869:-1:exon

position:1321239:-1
position: 1321239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321166-1321239:-1:exon

position:1321166:-1
position: 1321166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1320470-1320658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1319079-1319203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1316749-1316869:-1:exon

ATP5PF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: ATP5PF
product: ATP synthase peripheral stalk subunit F6, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835176.1
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(1316749..1316869,1319079..1319203,1320470..1320658,1321026..1321156))
location: region:1316749-1321156:-1
so has part: feature:1321026-1321156:-1:exon
so has part: feature:1320470-1320658:-1:exon
so has part: feature:1319079-1319203:-1:exon
so has part: feature:1316749-1316869:-1:exon

position:1321156:-1
position: 1321156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321026-1321156:-1:exon

position:1321026:-1
position: 1321026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1320470-1320658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1319079-1319203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1316749-1316869:-1:exon

ATP5PF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: ATP5PF
product: ATP synthase peripheral stalk subunit F6, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835175.1
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(1316749..1316869,1319079..1319203,1320470..1320658,1320958..1321153))
location: region:1316749-1321153:-1
so has part: feature:1320958-1321153:-1:exon
so has part: feature:1320470-1320658:-1:exon
so has part: feature:1319079-1319203:-1:exon
so has part: feature:1316749-1316869:-1:exon

position:1321153:-1
position: 1321153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320958-1321153:-1:exon

position:1320958:-1
position: 1320958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1320470-1320658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1319079-1319203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1316749-1316869:-1:exon

ATP5PF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: ATP5PF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial
translation: MILHQILQLSSIFRSAVSTHLRRNIGLSAVVFNKTKELDPVQKLFLDKIREYNTKSKQAGGPVDVGPEFQKDMNESLARLQRAYGEGDLTKFPEFKFEEPNFEETPK
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(1316841..1316869,1319079..1319203,1320470..1320639))
location: region:1316841-1320639:-1
so has part: feature:1320470-1320639:-1:exon
so has part: feature:1319079-1319203:-1:exon
so has part: feature:1316841-1316869:-1:exon

XP_049691130.1
type: Protein
SIO_000068: ncbiprotein

position:1316841:-1
position: 1316841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320639:-1
position: 1320639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320470-1320639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1319079-1319203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316841-1316869:-1:exon

ATP5PF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: ATP5PF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial
translation: MILHQILQLSSIFRSAVSTHLRRNIGLSAVVFNKTKELDPVQKLFLDKIREYNTKSKQAGGPVDVGPEFQKDMNESLARLQRAYGEGDLTKFPEFKFEEPNFEETPK
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(1316841..1316869,1319079..1319203,1320470..1320639))
location: region:1316841-1320639:-1
so has part: feature:1320470-1320639:-1:exon
so has part: feature:1319079-1319203:-1:exon
so has part: feature:1316841-1316869:-1:exon

XP_049691132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1320470-1320639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1319079-1319203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316841-1316869:-1:exon

ATP5PF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: ATP5PF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial
translation: MILHQILQLSSIFRSAVSTHLRRNIGLSAVVFNKTKELDPVQKLFLDKIREYNTKSKQAGGPVDVGPEFQKDMNESLARLQRAYGEGDLTKFPEFKFEEPNFEETPK
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(1316841..1316869,1319079..1319203,1320470..1320639))
location: region:1316841-1320639:-1
so has part: feature:1320470-1320639:-1:exon
so has part: feature:1319079-1319203:-1:exon
so has part: feature:1316841-1316869:-1:exon

XP_049691133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1320470-1320639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1319079-1319203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316841-1316869:-1:exon

ATP5PF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: ATP5PF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial
translation: MILHQILQLSSIFRSAVSTHLRRNIGLSAVVFNKTKELDPVQKLFLDKIREYNTKSKQAGGPVDVGPEFQKDMNESLARLQRAYGEGDLTKFPEFKFEEPNFEETPK
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(1316841..1316869,1319079..1319203,1320470..1320639))
location: region:1316841-1320639:-1
so has part: feature:1320470-1320639:-1:exon
so has part: feature:1319079-1319203:-1:exon
so has part: feature:1316841-1316869:-1:exon

XP_049691134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1320470-1320639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1319079-1319203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1316841-1316869:-1:exon

GABPA
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: GABPA
note: GA binding protein transcription factor subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1321622..1350967
location: region:1321622-1350967:1
so has part: feature:1321622-1350967:1:exon
subclass of: SO_0000010

126053238
type: Gene
SIO_000068: ncbigene

position:1321622:1
position: 1321622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350967:1
position: 1350967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321622-1350967:1:exon

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: GABPA
product: GA binding protein transcription factor subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_049835165.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(1321622..1321714,1325473..1325573,1327180..1327324,1328216..1328300,1335332..1335577,1340043..1340237,1341047..1341103,1343672..1343864,1348134..1350967)
location: region:1321622-1350967:1
so has part: feature:1321622-1321714:1:exon
so has part: feature:1325473-1325573:1:exon
so has part: feature:1327180-1327324:1:exon
so has part: feature:1328216-1328300:1:exon
so has part: feature:1335332-1335577:1:exon
so has part: feature:1340043-1340237:1:exon
so has part: feature:1341047-1341103:1:exon
so has part: feature:1343672-1343864:1:exon
so has part: feature:1348134-1350967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321622-1321714:1:exon

position:1321714:1
position: 1321714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1325473-1325573:1:exon

position:1325473:1
position: 1325473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325573:1
position: 1325573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327180-1327324:1:exon

position:1327180:1
position: 1327180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327324:1
position: 1327324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1328216-1328300:1:exon

position:1328216:1
position: 1328216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328300:1
position: 1328300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1335332-1335577:1:exon

position:1335332:1
position: 1335332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335577:1
position: 1335577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1340043-1340237:1:exon

position:1340043:1
position: 1340043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340237:1
position: 1340237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1341047-1341103:1:exon

position:1341047:1
position: 1341047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341103:1
position: 1341103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1343672-1343864:1:exon

position:1343672:1
position: 1343672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343864:1
position: 1343864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1348134-1350967:1:exon

position:1348134:1
position: 1348134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: GABPA
product: GA binding protein transcription factor subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_049835164.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(1321627..1321714,1325473..1325573,1327180..1327324,1328216..1328300,1335332..1335577,1340043..1340237,1341047..1341103,1342128..1342268,1343672..1343864,1348134..1350965)
location: region:1321627-1350965:1
so has part: feature:1321627-1321714:1:exon
so has part: feature:1325473-1325573:1:exon
so has part: feature:1327180-1327324:1:exon
so has part: feature:1328216-1328300:1:exon
so has part: feature:1335332-1335577:1:exon
so has part: feature:1340043-1340237:1:exon
so has part: feature:1341047-1341103:1:exon
so has part: feature:1342128-1342268:1:exon
so has part: feature:1343672-1343864:1:exon
so has part: feature:1348134-1350965:1:exon

position:1321627:1
position: 1321627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350965:1
position: 1350965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321627-1321714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1325473-1325573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327180-1327324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1328216-1328300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1335332-1335577:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1340043-1340237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1341047-1341103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1342128-1342268:1:exon

position:1342128:1
position: 1342128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342268:1
position: 1342268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1343672-1343864:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1348134-1350965:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: GABPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X1
translation: MTKREAEELIEIEIDGTEKQECTEESIVEQTYTTAEFVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPDRSLFDQGVKTDGTVQLSVQVISRQGIEPKLNILEIVKPVETVEVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPVQWSTDQVLHWVVWVMKEFSMTDIDLNALSIPGRELCSLSQEDFFQRVPRGEILWSHLELLRKYVLASQEHSGEIATVTIDQPVQIIPASVQPATPTTIKVINSSAKAAKVQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(1325497..1325573,1327180..1327324,1328216..1328300,1335332..1335577,1340043..1340237,1341047..1341103,1342128..1342268,1343672..1343864,1348134..1348362)
location: region:1325497-1348362:1
so has part: feature:1325497-1325573:1:exon
so has part: feature:1327180-1327324:1:exon
so has part: feature:1328216-1328300:1:exon
so has part: feature:1335332-1335577:1:exon
so has part: feature:1340043-1340237:1:exon
so has part: feature:1341047-1341103:1:exon
so has part: feature:1342128-1342268:1:exon
so has part: feature:1343672-1343864:1:exon
so has part: feature:1348134-1348362:1:exon

XP_049691121.1
type: Protein
SIO_000068: ncbiprotein

position:1325497:1
position: 1325497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348362:1
position: 1348362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325497-1325573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327180-1327324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1328216-1328300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335332-1335577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1340043-1340237:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1341047-1341103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342128-1342268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1343672-1343864:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1348134-1348362:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: GABPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain isoform X2
translation: MTKREAEELIEIEIDGTEKQECTEESIVEQTYTTAEFVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPDRSLFDQGVKTDGTVQLSVQVISRQGIEPKLNILEIVKPVETVEVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPVQWSTDQVLHWVVWVMKEFSMTDIDLNALSIPGRELCSLSQEDFFQRVPRGEILWSHLELLRKYVLASQEHSGEIATVTIDQRNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(1325497..1325573,1327180..1327324,1328216..1328300,1335332..1335577,1340043..1340237,1341047..1341103,1343672..1343864,1348134..1348362)
location: region:1325497-1348362:1
so has part: feature:1325497-1325573:1:exon
so has part: feature:1327180-1327324:1:exon
so has part: feature:1328216-1328300:1:exon
so has part: feature:1335332-1335577:1:exon
so has part: feature:1340043-1340237:1:exon
so has part: feature:1341047-1341103:1:exon
so has part: feature:1343672-1343864:1:exon
so has part: feature:1348134-1348362:1:exon

XP_049691122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1325497-1325573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327180-1327324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1328216-1328300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335332-1335577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1340043-1340237:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1341047-1341103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1343672-1343864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1348134-1348362:1:exon

APP
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: APP
note: amyloid beta precursor protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1387269..1625636)
location: region:1387269-1625636:-1
so has part: feature:1387269-1625636:-1:exon
subclass of: SO_0000010

126053237
type: Gene
SIO_000068: ncbigene

position:1387269:-1
position: 1387269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625636:-1
position: 1625636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387269-1625636:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: APP
product: amyloid beta precursor protein, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835163.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1387269..1388524,1396624..1396770,1399887..1399987,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1453003,1454116..1454190,1462871..1463004,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625636))
location: region:1387269-1625636:-1
so has part: feature:1625409-1625636:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1453003:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1387269-1388524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625636:-1:exon

position:1625409:-1
position: 1625409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

position:1579377:-1
position: 1579377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579544:-1
position: 1579544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

position:1547391:-1
position: 1547391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1547520:-1
position: 1547520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

position:1511195:-1
position: 1511195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511307:-1
position: 1511307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

position:1509523:-1
position: 1509523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509716:-1
position: 1509716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

position:1490438:-1
position: 1490438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490640:-1
position: 1490640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1462871-1463004:-1:exon

position:1462871:-1
position: 1462871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463004:-1
position: 1463004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1454116-1454190:-1:exon

position:1454116:-1
position: 1454116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454190:-1
position: 1454190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1452845-1453003:-1:exon

position:1452845:-1
position: 1452845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453003:-1
position: 1453003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1441644-1441772:-1:exon

position:1441644:-1
position: 1441644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441772:-1
position: 1441772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1439484-1439583:-1:exon

position:1439484:-1
position: 1439484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439583:-1
position: 1439583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1418041-1418262:-1:exon

position:1418041:-1
position: 1418041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418262:-1
position: 1418262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1399887-1399987:-1:exon

position:1399887:-1
position: 1399887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399987:-1
position: 1399987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1396624-1396770:-1:exon

position:1396624:-1
position: 1396624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396770:-1
position: 1396770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1387269-1388524:-1:exon

position:1388524:-1
position: 1388524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: APP
product: amyloid beta precursor protein, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835161.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1387269..1388524,1396624..1396770,1399887..1399987,1410850..1410903,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1453003,1454116..1454190,1462871..1463004,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625636))
location: region:1387269-1625636:-1
so has part: feature:1625409-1625636:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1453003:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1410850-1410903:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1387269-1388524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452845-1453003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1410850-1410903:-1:exon

position:1410850:-1
position: 1410850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410903:-1
position: 1410903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1387269-1388524:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: APP
product: amyloid beta precursor protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835159.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1387269..1388524,1396624..1396770,1399887..1399987,1410850..1410903,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1452994,1454116..1454190,1462871..1463004,1479972..1480139,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625636))
location: region:1387269-1625636:-1
so has part: feature:1625409-1625636:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1479972-1480139:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1452994:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1410850-1410903:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1387269-1388524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479972-1480139:-1:exon

position:1479972:-1
position: 1479972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480139:-1
position: 1480139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452845-1452994:-1:exon

position:1452994:-1
position: 1452994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1410850-1410903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1387269-1388524:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: APP
product: amyloid beta precursor protein, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835160.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1387269..1388524,1396624..1396770,1399887..1399987,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1453003,1454116..1454190,1462871..1463004,1479972..1480139,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625636))
location: region:1387269-1625636:-1
so has part: feature:1625409-1625636:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1479972-1480139:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1453003:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1387269-1388524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479972-1480139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452845-1453003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1387269-1388524:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: APP
product: amyloid beta precursor protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835158.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1387269..1388524,1396624..1396770,1399887..1399987,1410850..1410903,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1453003,1454116..1454190,1462871..1463004,1479972..1480139,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625636))
location: region:1387269-1625636:-1
so has part: feature:1625409-1625636:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1479972-1480139:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1453003:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1410850-1410903:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1387269-1388524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479972-1480139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452845-1453003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1410850-1410903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1387269-1388524:-1:exon

APP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: APP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta precursor protein isoform X5
translation: MLPHLALLLLASGAARALEVPADGNTGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKKGWKQCNGHPHIVVPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKIVEEQPEEDEELTVVEDEDADDDDDDGDEIEEETEEEYEAATERTTSIATTTTTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGEFSLDDLQPWHPFGVDSVPANTENEGSGLTNVKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1388423..1388524,1396624..1396770,1399887..1399987,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1453003,1454116..1454190,1462871..1463004,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625465))
location: region:1388423-1625465:-1
so has part: feature:1625409-1625465:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1453003:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1388423-1388524:-1:exon

XP_049691120.1
type: Protein
SIO_000068: ncbiprotein

position:1388423:-1
position: 1388423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625465:-1
position: 1625465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452845-1453003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1388423-1388524:-1:exon

APP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: APP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta precursor protein isoform X4
translation: MLPHLALLLLASGAARALEVPADGNTGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKKGWKQCNGHPHIVVPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKIVEEQPEEDEELTVVEDEDADDDDDDGDEIEEETEEEYEAATERTTSIATTTTTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1388423..1388524,1396624..1396770,1399887..1399987,1410850..1410903,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1453003,1454116..1454190,1462871..1463004,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625465))
location: region:1388423-1625465:-1
so has part: feature:1625409-1625465:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1453003:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1410850-1410903:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1388423-1388524:-1:exon

XP_049691118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452845-1453003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1410850-1410903:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1388423-1388524:-1:exon

APP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: APP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta precursor protein isoform X2
translation: MLPHLALLLLASGAARALEVPADGNTGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKKGWKQCNGHPHIVVPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKIVEEQPEEDEELTVVEDEDADDDDDDGDEIEEETEEEYEAATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVAEGKCAPFFYGGCGGNRNNFDSEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1388423..1388524,1396624..1396770,1399887..1399987,1410850..1410903,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1452994,1454116..1454190,1462871..1463004,1479972..1480139,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625465))
location: region:1388423-1625465:-1
so has part: feature:1625409-1625465:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1479972-1480139:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1452994:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1410850-1410903:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1388423-1388524:-1:exon

XP_049691116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479972-1480139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452845-1452994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1410850-1410903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1388423-1388524:-1:exon

APP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: APP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta precursor protein isoform X3
translation: MLPHLALLLLASGAARALEVPADGNTGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKKGWKQCNGHPHIVVPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKIVEEQPEEDEELTVVEDEDADDDDDDGDEIEEETEEEYEAATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVAEGKCAPFFYGGCGGNRNNFDSEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGEFSLDDLQPWHPFGVDSVPANTENEGSGLTNVKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1388423..1388524,1396624..1396770,1399887..1399987,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1453003,1454116..1454190,1462871..1463004,1479972..1480139,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625465))
location: region:1388423-1625465:-1
so has part: feature:1625409-1625465:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1479972-1480139:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1453003:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1388423-1388524:-1:exon

XP_049691117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479972-1480139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452845-1453003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1388423-1388524:-1:exon

APP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: APP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta precursor protein isoform X1
translation: MLPHLALLLLASGAARALEVPADGNTGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKKGWKQCNGHPHIVVPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKIVEEQPEEDEELTVVEDEDADDDDDDGDEIEEETEEEYEAATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVAEGKCAPFFYGGCGGNRNNFDSEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(1388423..1388524,1396624..1396770,1399887..1399987,1410850..1410903,1418041..1418262,1439484..1439583,1441644..1441772,1452845..1453003,1454116..1454190,1462871..1463004,1479972..1480139,1490438..1490640,1509523..1509716,1511195..1511307,1547391..1547520,1579377..1579544,1625409..1625465))
location: region:1388423-1625465:-1
so has part: feature:1625409-1625465:-1:exon
so has part: feature:1579377-1579544:-1:exon
so has part: feature:1547391-1547520:-1:exon
so has part: feature:1511195-1511307:-1:exon
so has part: feature:1509523-1509716:-1:exon
so has part: feature:1490438-1490640:-1:exon
so has part: feature:1479972-1480139:-1:exon
so has part: feature:1462871-1463004:-1:exon
so has part: feature:1454116-1454190:-1:exon
so has part: feature:1452845-1453003:-1:exon
so has part: feature:1441644-1441772:-1:exon
so has part: feature:1439484-1439583:-1:exon
so has part: feature:1418041-1418262:-1:exon
so has part: feature:1410850-1410903:-1:exon
so has part: feature:1399887-1399987:-1:exon
so has part: feature:1396624-1396770:-1:exon
so has part: feature:1388423-1388524:-1:exon

XP_049691115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1625409-1625465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579377-1579544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1547391-1547520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1511195-1511307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509523-1509716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1490438-1490640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479972-1480139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462871-1463004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1454116-1454190:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452845-1453003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441644-1441772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1439484-1439583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1418041-1418262:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1410850-1410903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1399887-1399987:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1396624-1396770:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1388423-1388524:-1:exon

ADAMTS5
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: ADAMTS5
note: ADAM metallopeptidase with thrombospondin type 1 motif 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1623148..1938636)
location: region:1623148-1938636:-1
so has part: feature:1623148-1938636:-1:exon
subclass of: SO_0000010

126053236
type: Gene
SIO_000068: ncbigene

position:1623148:-1
position: 1623148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938636:-1
position: 1938636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1623148-1938636:-1:exon

ADAMTS5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8957
gene: ADAMTS5
product: ADAM metallopeptidase with thrombospondin type 1 motif 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
transcript id: XR_007510312.1
SIO_010081: ADAMTS5
so part of: ADAMTS5
location: complement(join(1623148..1623159,1893108..1898474,1902009..1902184,1903037..1903212,1903654..1903837,1905087..1905370,1911432..1911599,1926140..1926272,1937665..1938636))
location: region:1623148-1938636:-1
so has part: feature:1937665-1938636:-1:exon
so has part: feature:1926140-1926272:-1:exon
so has part: feature:1911432-1911599:-1:exon
so has part: feature:1905087-1905370:-1:exon
so has part: feature:1903654-1903837:-1:exon
so has part: feature:1903037-1903212:-1:exon
so has part: feature:1902009-1902184:-1:exon
so has part: feature:1893108-1898474:-1:exon
so has part: feature:1623148-1623159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1937665-1938636:-1:exon

position:1937665:-1
position: 1937665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1926140-1926272:-1:exon

position:1926140:-1
position: 1926140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926272:-1
position: 1926272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1911432-1911599:-1:exon

position:1911432:-1
position: 1911432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911599:-1
position: 1911599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1905087-1905370:-1:exon

position:1905087:-1
position: 1905087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905370:-1
position: 1905370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1903654-1903837:-1:exon

position:1903654:-1
position: 1903654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1903837:-1
position: 1903837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1903037-1903212:-1:exon

position:1903037:-1
position: 1903037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1903212:-1
position: 1903212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1902009-1902184:-1:exon

position:1902009:-1
position: 1902009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902184:-1
position: 1902184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1893108-1898474:-1:exon

position:1893108:-1
position: 1893108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898474:-1
position: 1898474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1623148-1623159:-1:exon

position:1623159:-1
position: 1623159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CYYR1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: CYYR1
note: cysteine and tyrosine rich 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1704624..1764389)
location: region:1704624-1764389:-1
so has part: feature:1704624-1764389:-1:exon
subclass of: SO_0000010

126053241
type: Gene
SIO_000068: ncbigene

position:1704624:-1
position: 1704624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764389:-1
position: 1764389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704624-1764389:-1:exon

CYYR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: CYYR1
product: cysteine and tyrosine rich 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_049835170.1
SIO_010081: CYYR1
subclass of: SO_0000673
so part of: CYYR1
location: complement(join(1704624..1705715,1708798..1708955,1761964..1762066,1764302..1764389))
location: region:1704624-1764389:-1
so has part: feature:1764302-1764389:-1:exon
so has part: feature:1761964-1762066:-1:exon
so has part: feature:1708798-1708955:-1:exon
so has part: feature:1704624-1705715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1764302-1764389:-1:exon

position:1764302:-1
position: 1764302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1761964-1762066:-1:exon

position:1761964:-1
position: 1761964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762066:-1
position: 1762066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1708798-1708955:-1:exon

position:1708798:-1
position: 1708798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708955:-1
position: 1708955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1704624-1705715:-1:exon

position:1705715:-1
position: 1705715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CYYR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: CYYR1
product: cysteine and tyrosine rich 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_049835172.1
SIO_010081: CYYR1
subclass of: SO_0000673
so part of: CYYR1
location: complement(join(1704624..1705715,1708798..1708955,1761964..1762066,1762366..1762427,1763082..1763180))
location: region:1704624-1763180:-1
so has part: feature:1763082-1763180:-1:exon
so has part: feature:1762366-1762427:-1:exon
so has part: feature:1761964-1762066:-1:exon
so has part: feature:1708798-1708955:-1:exon
so has part: feature:1704624-1705715:-1:exon

position:1763180:-1
position: 1763180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763082-1763180:-1:exon

position:1763082:-1
position: 1763082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1762366-1762427:-1:exon

position:1762366:-1
position: 1762366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762427:-1
position: 1762427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1761964-1762066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1708798-1708955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1704624-1705715:-1:exon

CYYR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: CYYR1
product: cysteine and tyrosine rich 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_049835171.1
SIO_010081: CYYR1
subclass of: SO_0000673
so part of: CYYR1
location: complement(join(1704624..1705715,1708798..1708955,1761964..1762069,1762366..1762427,1763082..1763180))
location: region:1704624-1763180:-1
so has part: feature:1763082-1763180:-1:exon
so has part: feature:1762366-1762427:-1:exon
so has part: feature:1761964-1762069:-1:exon
so has part: feature:1708798-1708955:-1:exon
so has part: feature:1704624-1705715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763082-1763180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1762366-1762427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1761964-1762069:-1:exon

position:1762069:-1
position: 1762069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1708798-1708955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1704624-1705715:-1:exon

CYYR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: CYYR1
product: cysteine and tyrosine rich 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_049835169.1
SIO_010081: CYYR1
subclass of: SO_0000673
so part of: CYYR1
location: complement(join(1704624..1705715,1708798..1708955,1761964..1762069,1762366..1762563))
location: region:1704624-1762563:-1
so has part: feature:1762366-1762563:-1:exon
so has part: feature:1761964-1762069:-1:exon
so has part: feature:1708798-1708955:-1:exon
so has part: feature:1704624-1705715:-1:exon

position:1762563:-1
position: 1762563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1762366-1762563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1761964-1762069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1708798-1708955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1704624-1705715:-1:exon

CYYR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: CYYR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine and tyrosine-rich protein 1 isoform X2
translation: MEAAGRRGPAEGRPARGVLLPSFLLLLLAEDCLAQCDNDCKAYCCDGTTPYCCSYYAYIGNVLSGTAIAGIVFGIVFIMGVIAGIAICICMCMKNNRGTRVGVIRTTHINTISAYPVAPPPYSYDYEMEYPADLPPPYTPTPQTSIQYPPPPPYPGYSGK
SIO_010081: CYYR1
subclass of: SO_0000673
so part of: CYYR1
location: complement(join(1705582..1705715,1708798..1708955,1761964..1762066,1764302..1764389))
location: region:1705582-1764389:-1
so has part: feature:1764302-1764389:-1:exon
so has part: feature:1761964-1762066:-1:exon
so has part: feature:1708798-1708955:-1:exon
so has part: feature:1705582-1705715:-1:exon

XP_049691127.1
type: Protein
SIO_000068: ncbiprotein

position:1705582:-1
position: 1705582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764302-1764389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1761964-1762066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1708798-1708955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705582-1705715:-1:exon

CYYR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: CYYR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine and tyrosine-rich protein 1 isoform X1
translation: MREPQAALIYTRGWGWAGTVGGSQFPDSFLLLSCSSARQAAGLRFPSGLLAGMEKAEDCLAQCDNDCKAYCCDGTTPYCCSYYAYIGNVLSGTAIAGIVFGIVFIMGVIAGIAICICMCMKNNRGTRVGVIRTTHINTISAYPVAPPPYSYDYEMEYPADLPPPYTPTPQTSIQYPPPPPYPGYSGK
SIO_010081: CYYR1
subclass of: SO_0000673
so part of: CYYR1
location: complement(join(1705582..1705715,1708798..1708955,1761964..1762069,1762366..1762531))
location: region:1705582-1762531:-1
so has part: feature:1762366-1762531:-1:exon
so has part: feature:1761964-1762069:-1:exon
so has part: feature:1708798-1708955:-1:exon
so has part: feature:1705582-1705715:-1:exon

XP_049691126.1
type: Protein
SIO_000068: ncbiprotein

position:1762531:-1
position: 1762531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1762366-1762531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1761964-1762069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1708798-1708955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705582-1705715:-1:exon

CYYR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: CYYR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine and tyrosine-rich protein 1 isoform X4
translation: MEKEDCLAQCDNDCKAYCCDGTTPYCCSYYAYIGNVLSGTAIAGIVFGIVFIMGVIAGIAICICMCMKNNRGTRVGVIRTTHINTISAYPVAPPPYSYDYEMEYPADLPPPYTPTPQTSIQYPPPPPYPGYSGK
SIO_010081: CYYR1
subclass of: SO_0000673
so part of: CYYR1
location: complement(join(1705582..1705715,1708798..1708955,1761964..1762066,1762366..1762375))
location: region:1705582-1762375:-1
so has part: feature:1762366-1762375:-1:exon
so has part: feature:1761964-1762066:-1:exon
so has part: feature:1708798-1708955:-1:exon
so has part: feature:1705582-1705715:-1:exon

XP_049691129.1
type: Protein
SIO_000068: ncbiprotein

position:1762375:-1
position: 1762375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1762366-1762375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1761964-1762066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1708798-1708955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705582-1705715:-1:exon

CYYR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: CYYR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine and tyrosine-rich protein 1 isoform X3
translation: MEKAEDCLAQCDNDCKAYCCDGTTPYCCSYYAYIGNVLSGTAIAGIVFGIVFIMGVIAGIAICICMCMKNNRGTRVGVIRTTHINTISAYPVAPPPYSYDYEMEYPADLPPPYTPTPQTSIQYPPPPPYPGYSGK
SIO_010081: CYYR1
subclass of: SO_0000673
so part of: CYYR1
location: complement(join(1705582..1705715,1708798..1708955,1761964..1762069,1762366..1762375))
location: region:1705582-1762375:-1
so has part: feature:1762366-1762375:-1:exon
so has part: feature:1761964-1762069:-1:exon
so has part: feature:1708798-1708955:-1:exon
so has part: feature:1705582-1705715:-1:exon

XP_049691128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1762366-1762375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1761964-1762069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1708798-1708955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705582-1705715:-1:exon

ADAMTS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: ADAMTS1
note: ADAM metallopeptidase with thrombospondin type 1 motif 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1850034..1858702)
location: region:1850034-1858702:-1
so has part: feature:1850034-1858702:-1:exon
subclass of: SO_0000010

126053235
type: Gene
SIO_000068: ncbigene

position:1850034:-1
position: 1850034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858702:-1
position: 1858702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1850034-1858702:-1:exon

ADAMTS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: ADAMTS1
product: ADAM metallopeptidase with thrombospondin type 1 motif 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
transcript id: XM_049835155.1
SIO_010081: ADAMTS1
subclass of: SO_0000673
so part of: ADAMTS1
location: complement(join(1850034..1852879,1853248..1853423,1854320..1854495,1854595..1854781,1855009..1855295,1855592..1855759,1856195..1856327,1856770..1857116,1857533..1858702))
location: region:1850034-1858702:-1
so has part: feature:1857533-1858702:-1:exon
so has part: feature:1856770-1857116:-1:exon
so has part: feature:1856195-1856327:-1:exon
so has part: feature:1855592-1855759:-1:exon
so has part: feature:1855009-1855295:-1:exon
so has part: feature:1854595-1854781:-1:exon
so has part: feature:1854320-1854495:-1:exon
so has part: feature:1853248-1853423:-1:exon
so has part: feature:1850034-1852879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1857533-1858702:-1:exon

position:1857533:-1
position: 1857533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1856770-1857116:-1:exon

position:1856770:-1
position: 1856770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857116:-1
position: 1857116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1856195-1856327:-1:exon

position:1856195:-1
position: 1856195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856327:-1
position: 1856327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1855592-1855759:-1:exon

position:1855592:-1
position: 1855592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855759:-1
position: 1855759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1855009-1855295:-1:exon

position:1855009:-1
position: 1855009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855295:-1
position: 1855295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1854595-1854781:-1:exon

position:1854595:-1
position: 1854595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854781:-1
position: 1854781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1854320-1854495:-1:exon

position:1854320:-1
position: 1854320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854495:-1
position: 1854495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1853248-1853423:-1:exon

position:1853248:-1
position: 1853248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853423:-1
position: 1853423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1850034-1852879:-1:exon

position:1852879:-1
position: 1852879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAMTS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: ADAMTS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 1
translation: MRTGERLPVPAPALLPVLAALLGLCSAERPAERQALVVPRRLGAAGGRERFRLEAFGERLTLELEPDSSFLAPDFTLQYLGGPPPPPEDDLSRCFYSGTVNRDPSSSAALSLCAGMRGAFSLRGRQYLIQPAPGTAHRRGAHLLRLRGSRRAAPADRCAVAQAETEAAAAGPEPAGRAETRSRRKKRFVSSPRYVETMLVADQSMAEFHGSGLKHYLLTLLSVAAKLYKHPSIRNSISLVVVKIMVIYEERKGPDISSNAALTLRNFCSWQKQHNPPSDRHAEHYDTAILFTRQDLCGAKTCDTLGMADVGTVCDLNRSCSIIEDDGLQAAFTTAHELGHVFNMPHDDAKQCAGINGISRDFHMMASMLSNLDRSQPWSPCSAYMITTFLDNGHGECLLDKPHKPIQLPSDLPGTLYDANRQCQFTFGDESKHCPDAASTCTTLWCTGTSGGLLVCQTKHFPWADGTSCGEGKWCMNGKCVNKTEKKHYDTPVHGSWGSWGPWGECSRTCGGGVQYSFRECDNPIPRNGGKYCEGKRVQYRSCNIEDCPDNDGKTFREEQCEKHNEFSKSPFGSGPAVEWTPKFAGVSPKDRCKLVCRAKGTGYFFVLQPKVVDGTPCSPDSTSVCVQGQCVKAGCDRMIGSNKKFDKCGICGGNGSTCKKVSGTLVRAKPGYHDVVTIPAGATNIEVKQRNHRGARHDGSFLAIKAADGTYILNGDYTLSTLEQDITYKGSVLRYSGSSAALERIRSFSPLKEPLTIQVLTVGDLPQPKIKFTYFVKKPTQPGSEKAPSRKKESFNAIREIISSEWVIEEWGECSKSCGSGWQRRAVECRDPRGRPATDCARELKPSDVRPCADVPCPQWQLGDWSPCSKTCGKGFKKRLLKCISYDGSVLPQESCEPSKKPKHLIDFCNVTDCS
SIO_010081: ADAMTS1
subclass of: SO_0000673
so part of: ADAMTS1
location: complement(join(1852138..1852879,1853248..1853423,1854320..1854495,1854595..1854781,1855009..1855295,1855592..1855759,1856195..1856327,1856770..1857116,1857533..1858067))
location: region:1852138-1858067:-1
so has part: feature:1857533-1858067:-1:exon
so has part: feature:1856770-1857116:-1:exon
so has part: feature:1856195-1856327:-1:exon
so has part: feature:1855592-1855759:-1:exon
so has part: feature:1855009-1855295:-1:exon
so has part: feature:1854595-1854781:-1:exon
so has part: feature:1854320-1854495:-1:exon
so has part: feature:1853248-1853423:-1:exon
so has part: feature:1852138-1852879:-1:exon

XP_049691112.1
type: Protein
SIO_000068: ncbiprotein

position:1852138:-1
position: 1852138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858067:-1
position: 1858067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1857533-1858067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1856770-1857116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1856195-1856327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1855592-1855759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1855009-1855295:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1854595-1854781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1854320-1854495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1853248-1853423:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1852138-1852879:-1:exon

ADAMTS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: ADAMTS5
product: ADAM metallopeptidase with thrombospondin type 1 motif 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
transcript id: XM_049835156.1
SIO_010081: ADAMTS5
subclass of: SO_0000673
so part of: ADAMTS5
location: complement(join(1891549..1898474,1902009..1902184,1903037..1903212,1903654..1903837,1905087..1905370,1911432..1911599,1926140..1926272,1937665..1938636))
location: region:1891549-1938636:-1
so has part: feature:1937665-1938636:-1:exon
so has part: feature:1926140-1926272:-1:exon
so has part: feature:1911432-1911599:-1:exon
so has part: feature:1905087-1905370:-1:exon
so has part: feature:1903654-1903837:-1:exon
so has part: feature:1903037-1903212:-1:exon
so has part: feature:1902009-1902184:-1:exon
so has part: feature:1891549-1898474:-1:exon

position:1891549:-1
position: 1891549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1937665-1938636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1926140-1926272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1911432-1911599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905087-1905370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903654-1903837:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1903037-1903212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1902009-1902184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1891549-1898474:-1:exon

ADAMTS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: ADAMTS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 5
translation: MLLKLLSLLLAAELHLALAQPPAPADDGAPPPPAAAASPPPPPPRPRPRPRPGPPPGPPRRPPPPRGASGVVRRLDPTYAGGGKAGYVLYAGGQRFLLDLERDEAVGARAPRAGGPPRCYYRGTVDGSPRSLAVFNLCGGLDGFFAVGRSRYTVRPARRGGEAAGPRIYGEGPARAPHLFRRDRFSFETVPARASCETRDPAGAAAGDGRRRRRRRRSVSRARQVELLLVADASMVRKYGKGLQHYLLTLASIASRLYAHASLENHVRLAVVKVVALGEKEKGLEVNRNAATTLKNFCKWQHQHNRLDDDHDEHYDAAILFTREDLCGHHSCDTLGMADVGTICSPERSCAVIEDDGLHAAFTVAHEIGHLLGLSHDDSKFCEENFGSMEDKRLMSSILTSIDASKPWSKCTSATITEFFDDGHGNCLLDQPRKQILGPEELPGQTYDAIRQCKLAFGPEYTVCPGMDVCSRLWCAVVRQGQMVCLTKKLPAVEGTPCGKGRICLQGKCVDKTKKKYYSASSHGNWGSWGPWGQCSRTCGGGVQFAYRHCNNPAPRNNGRYCTGKRAIYRSCNVAPCPANAKSFRQEQCEARNGYQSDAKGVKTFVEWVPKYAGVLPGDVCKLTCRAKGTGYYVVFSQKVTDGTECRPYSNSVCVRGKCIRTGCDGIIGSKLQYDKCGVCGGDNSSCTKVMGTFTKKSKGYTDVVKIPEGATHIKVRQFKTKDQSRFTAYLALKKKNGEYLVNGKYMISTSETIIDINGTVMNYSGWSHKDDFLHAMGHSATKEVLIVQILATDPTQPVDVRYSFFVPKKQGQMTNSVTSSGSSSKVTPQLMQPRWVTGPWLSCSRTCDTGWHTRTVQCKDGHGKLAKGCLLSQRPSAFKQCLLKKC
SIO_010081: ADAMTS5
subclass of: SO_0000673
so part of: ADAMTS5
location: complement(join(1897904..1898474,1902009..1902184,1903037..1903212,1903654..1903837,1905087..1905370,1911432..1911599,1926140..1926272,1937665..1938636))
location: region:1897904-1938636:-1
so has part: feature:1937665-1938636:-1:exon
so has part: feature:1926140-1926272:-1:exon
so has part: feature:1911432-1911599:-1:exon
so has part: feature:1905087-1905370:-1:exon
so has part: feature:1903654-1903837:-1:exon
so has part: feature:1903037-1903212:-1:exon
so has part: feature:1902009-1902184:-1:exon
so has part: feature:1897904-1898474:-1:exon

XP_049691113.1
type: Protein
SIO_000068: ncbiprotein

position:1897904:-1
position: 1897904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1937665-1938636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1926140-1926272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1911432-1911599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1905087-1905370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903654-1903837:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1903037-1903212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1902009-1902184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1897904-1898474:-1:exon

N6AMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: N6AMT1
note: N-6 adenine-specific DNA methyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2881648..2889073
location: region:2881648-2889073:1
so has part: feature:2881648-2889073:1:exon
subclass of: SO_0000010

126053095
type: Gene
SIO_000068: ncbigene

position:2881648:1
position: 2881648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889073:1
position: 2889073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881648-2889073:1:exon

N6AMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: N6AMT1
product: N-6 adenine-specific DNA methyltransferase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049834752.1
SIO_010081: N6AMT1
subclass of: SO_0000673
so part of: N6AMT1
location: join(2881648..2881812,2882823..2882912,2883540..2883630,2884503..2884586,2885247..2885388,2886420..2889073)
location: region:2881648-2889073:1
so has part: feature:2881648-2881812:1:exon
so has part: feature:2882823-2882912:1:exon
so has part: feature:2883540-2883630:1:exon
so has part: feature:2884503-2884586:1:exon
so has part: feature:2885247-2885388:1:exon
so has part: feature:2886420-2889073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881648-2881812:1:exon

position:2881812:1
position: 2881812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2882823-2882912:1:exon

position:2882823:1
position: 2882823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2882912:1
position: 2882912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2883540-2883630:1:exon

position:2883540:1
position: 2883540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883630:1
position: 2883630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2884503-2884586:1:exon

position:2884503:1
position: 2884503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884586:1
position: 2884586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2885247-2885388:1:exon

position:2885247:1
position: 2885247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885388:1
position: 2885388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2886420-2889073:1:exon

position:2886420:1
position: 2886420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

N6AMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: N6AMT1
product: N-6 adenine-specific DNA methyltransferase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049834753.1
SIO_010081: N6AMT1
subclass of: SO_0000673
so part of: N6AMT1
location: join(2881648..2881812,2882823..2882912,2883540..2883630,2885247..2885388,2886420..2889073)
location: region:2881648-2889073:1
so has part: feature:2881648-2881812:1:exon
so has part: feature:2882823-2882912:1:exon
so has part: feature:2883540-2883630:1:exon
so has part: feature:2885247-2885388:1:exon
so has part: feature:2886420-2889073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881648-2881812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882823-2882912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883540-2883630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2885247-2885388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2886420-2889073:1:exon

N6AMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: N6AMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase N6AMT1 isoform X1
translation: MAAPPPLPTPRYEHVGPQGPFRDVYEPAEDTFLLLDALERDAARLRQARVEICLEIGSGSGVVSTFLASSIIGSSALYICTDINPMAAYCTLETALLNNVHLQPVITDLVKGLSPRLNGKVDLLLFNPPYVVTPSEEVEGRGIEASWAGGRKGREVMDRVFPLVPDLLSPGGLFYLVTIKENNPDEILETMKKGGLEGTRVLSRQAGQEMLTILKFRKS
SIO_010081: N6AMT1
subclass of: SO_0000673
so part of: N6AMT1
location: join(2881667..2881812,2882823..2882912,2883540..2883630,2884503..2884586,2885247..2885388,2886420..2886526)
location: region:2881667-2886526:1
so has part: feature:2881667-2881812:1:exon
so has part: feature:2882823-2882912:1:exon
so has part: feature:2883540-2883630:1:exon
so has part: feature:2884503-2884586:1:exon
so has part: feature:2885247-2885388:1:exon
so has part: feature:2886420-2886526:1:exon

XP_049690709.1
type: Protein
SIO_000068: ncbiprotein

position:2881667:1
position: 2881667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886526:1
position: 2886526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881667-2881812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882823-2882912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883540-2883630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2884503-2884586:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2885247-2885388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2886420-2886526:1:exon

N6AMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: N6AMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase N6AMT1 isoform X2
translation: MAAPPPLPTPRYEHVGPQGPFRDVYEPAEDTFLLLDALERDAARLRQARVEICLEIGSGSGVVSTFLASSIIGSSALYICTDINPMAAYCTLETALLNNVHLQPVITDLVEGRGIEASWAGGRKGREVMDRVFPLVPDLLSPGGLFYLVTIKENNPDEILETMKKGGLEGTRVLSRQAGQEMLTILKFRKS
SIO_010081: N6AMT1
subclass of: SO_0000673
so part of: N6AMT1
location: join(2881667..2881812,2882823..2882912,2883540..2883630,2885247..2885388,2886420..2886526)
location: region:2881667-2886526:1
so has part: feature:2881667-2881812:1:exon
so has part: feature:2882823-2882912:1:exon
so has part: feature:2883540-2883630:1:exon
so has part: feature:2885247-2885388:1:exon
so has part: feature:2886420-2886526:1:exon

XP_049690710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2881667-2881812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882823-2882912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883540-2883630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2885247-2885388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2886420-2886526:1:exon

LTN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: LTN1
note: listerin E3 ubiquitin protein ligase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2890580..2922833)
location: region:2890580-2922833:-1
so has part: feature:2890580-2922833:-1:exon
subclass of: SO_0000010

126053094
type: Gene
SIO_000068: ncbigene

position:2890580:-1
position: 2890580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2922833:-1
position: 2922833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2890580-2922833:-1:exon

LTN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: LTN1
product: listerin E3 ubiquitin protein ligase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049834749.1
SIO_010081: LTN1
subclass of: SO_0000673
so part of: LTN1
location: complement(join(2890580..2891654,2892447..2892614,2893278..2893472,2894006..2894226,2895361..2895532,2895993..2896179,2897068..2897142,2898085..2898322,2898608..2898821,2900708..2900852,2901752..2901887,2903802..2903944,2904203..2904307,2904474..2904633,2905615..2905816,2906548..2906698,2906982..2907135,2908132..2908371,2910799..2910991,2912017..2912058,2912566..2913348,2913699..2913846,2915162..2915352,2917017..2917190,2917875..2918055,2918496..2918548,2919311..2919541,2920582..2920680,2921012..2921215,2922727..2922833))
location: region:2890580-2922833:-1
so has part: feature:2922727-2922833:-1:exon
so has part: feature:2921012-2921215:-1:exon
so has part: feature:2920582-2920680:-1:exon
so has part: feature:2919311-2919541:-1:exon
so has part: feature:2918496-2918548:-1:exon
so has part: feature:2917875-2918055:-1:exon
so has part: feature:2917017-2917190:-1:exon
so has part: feature:2915162-2915352:-1:exon
so has part: feature:2913699-2913846:-1:exon
so has part: feature:2912566-2913348:-1:exon
so has part: feature:2912017-2912058:-1:exon
so has part: feature:2910799-2910991:-1:exon
so has part: feature:2908132-2908371:-1:exon
so has part: feature:2906982-2907135:-1:exon
so has part: feature:2906548-2906698:-1:exon
so has part: feature:2905615-2905816:-1:exon
so has part: feature:2904474-2904633:-1:exon
so has part: feature:2904203-2904307:-1:exon
so has part: feature:2903802-2903944:-1:exon
so has part: feature:2901752-2901887:-1:exon
so has part: feature:2900708-2900852:-1:exon
so has part: feature:2898608-2898821:-1:exon
so has part: feature:2898085-2898322:-1:exon
so has part: feature:2897068-2897142:-1:exon
so has part: feature:2895993-2896179:-1:exon
so has part: feature:2895361-2895532:-1:exon
so has part: feature:2894006-2894226:-1:exon
so has part: feature:2893278-2893472:-1:exon
so has part: feature:2892447-2892614:-1:exon
so has part: feature:2890580-2891654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2922727-2922833:-1:exon

position:2922727:-1
position: 2922727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2921012-2921215:-1:exon

position:2921012:-1
position: 2921012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2921215:-1
position: 2921215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2920582-2920680:-1:exon

position:2920582:-1
position: 2920582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2920680:-1
position: 2920680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2919311-2919541:-1:exon

position:2919311:-1
position: 2919311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2919541:-1
position: 2919541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2918496-2918548:-1:exon

position:2918496:-1
position: 2918496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2918548:-1
position: 2918548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2917875-2918055:-1:exon

position:2917875:-1
position: 2917875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2918055:-1
position: 2918055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2917017-2917190:-1:exon

position:2917017:-1
position: 2917017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2917190:-1
position: 2917190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2915162-2915352:-1:exon

position:2915162:-1
position: 2915162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915352:-1
position: 2915352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2913699-2913846:-1:exon

position:2913699:-1
position: 2913699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2913846:-1
position: 2913846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2912566-2913348:-1:exon

position:2912566:-1
position: 2912566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2913348:-1
position: 2913348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2912017-2912058:-1:exon

position:2912017:-1
position: 2912017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2912058:-1
position: 2912058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2910799-2910991:-1:exon

position:2910799:-1
position: 2910799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2910991:-1
position: 2910991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2908132-2908371:-1:exon

position:2908132:-1
position: 2908132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908371:-1
position: 2908371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2906982-2907135:-1:exon

position:2906982:-1
position: 2906982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907135:-1
position: 2907135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2906548-2906698:-1:exon

position:2906548:-1
position: 2906548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2906698:-1
position: 2906698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2905615-2905816:-1:exon

position:2905615:-1
position: 2905615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2905816:-1
position: 2905816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2904474-2904633:-1:exon

position:2904474:-1
position: 2904474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904633:-1
position: 2904633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2904203-2904307:-1:exon

position:2904203:-1
position: 2904203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904307:-1
position: 2904307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2903802-2903944:-1:exon

position:2903802:-1
position: 2903802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2903944:-1
position: 2903944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2901752-2901887:-1:exon

position:2901752:-1
position: 2901752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901887:-1
position: 2901887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2900708-2900852:-1:exon

position:2900708:-1
position: 2900708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2900852:-1
position: 2900852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2898608-2898821:-1:exon

position:2898608:-1
position: 2898608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898821:-1
position: 2898821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2898085-2898322:-1:exon

position:2898085:-1
position: 2898085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898322:-1
position: 2898322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2897068-2897142:-1:exon

position:2897068:-1
position: 2897068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2897142:-1
position: 2897142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2895993-2896179:-1:exon

position:2895993:-1
position: 2895993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2896179:-1
position: 2896179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2895361-2895532:-1:exon

position:2895361:-1
position: 2895361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2895532:-1
position: 2895532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2894006-2894226:-1:exon

position:2894006:-1
position: 2894006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2894226:-1
position: 2894226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2893278-2893472:-1:exon

position:2893278:-1
position: 2893278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2893472:-1
position: 2893472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2892447-2892614:-1:exon

position:2892447:-1
position: 2892447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2892614:-1
position: 2892614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2890580-2891654:-1:exon

position:2891654:-1
position: 2891654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LTN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: LTN1
product: listerin E3 ubiquitin protein ligase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049834751.1
SIO_010081: LTN1
subclass of: SO_0000673
so part of: LTN1
location: complement(join(2890580..2891654,2892447..2892614,2893278..2893472,2894006..2894226,2895361..2895532,2895993..2896179,2897068..2897142,2898085..2898322,2898608..2898821,2900708..2900852,2901752..2901887,2903802..2903944,2904203..2904307,2904474..2904633,2905615..2905816,2906548..2906698,2906982..2907135,2908132..2908371,2910799..2910991,2912017..2912058,2912566..2913348,2913699..2913846,2915162..2915352,2916792..2916947))
location: region:2890580-2916947:-1
so has part: feature:2916792-2916947:-1:exon
so has part: feature:2915162-2915352:-1:exon
so has part: feature:2913699-2913846:-1:exon
so has part: feature:2912566-2913348:-1:exon
so has part: feature:2912017-2912058:-1:exon
so has part: feature:2910799-2910991:-1:exon
so has part: feature:2908132-2908371:-1:exon
so has part: feature:2906982-2907135:-1:exon
so has part: feature:2906548-2906698:-1:exon
so has part: feature:2905615-2905816:-1:exon
so has part: feature:2904474-2904633:-1:exon
so has part: feature:2904203-2904307:-1:exon
so has part: feature:2903802-2903944:-1:exon
so has part: feature:2901752-2901887:-1:exon
so has part: feature:2900708-2900852:-1:exon
so has part: feature:2898608-2898821:-1:exon
so has part: feature:2898085-2898322:-1:exon
so has part: feature:2897068-2897142:-1:exon
so has part: feature:2895993-2896179:-1:exon
so has part: feature:2895361-2895532:-1:exon
so has part: feature:2894006-2894226:-1:exon
so has part: feature:2893278-2893472:-1:exon
so has part: feature:2892447-2892614:-1:exon
so has part: feature:2890580-2891654:-1:exon

position:2916947:-1
position: 2916947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2916792-2916947:-1:exon

position:2916792:-1
position: 2916792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2915162-2915352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2913699-2913846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2912566-2913348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912017-2912058:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2910799-2910991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2908132-2908371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2906982-2907135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2906548-2906698:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905615-2905816:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2904474-2904633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2904203-2904307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2903802-2903944:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2901752-2901887:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2900708-2900852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2898608-2898821:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2898085-2898322:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2897068-2897142:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2895993-2896179:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2895361-2895532:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2894006-2894226:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2893278-2893472:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2892447-2892614:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2890580-2891654:-1:exon

LTN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: LTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase listerin isoform X1
translation: MGGKNKQRTKGNLRPSSSGRAAELLAKERGTVPGFIGFGTSQSDLGYIPAVQGAEEIDSLVDADFRMVLRKLSKRDITTKLKAMQEFGTKCKEREVEVVKGVLPYWPRIYCKISLDHDRRVREATQQSFEQLILKVKKHLAPYLKSIMGYWLVAQCDTYSPAASAAKVAFEKAFPSGKQPEALVFCKDEILNVLQDHLLKETPDTLSDPQTVPEEEREAKFFRILTCSLLALKKLLSMLPKREMHSLEEKLMPLLSQNKFWKYGKHNVPQVRSAFFELASALCQYLPELVKAEAPRVCPAVLLSIDDSDAVVCPALWEAVLYAITTIEDCWSHVNAKKGVLPKLWTVLREGGRGLATVIYPNLLPFISKVPPGIAEPKLEYFRTFFSSIIQGLSSERAIASPSESSAIITAFMECLRFVILQNLGEEDDQRQIHQMLIYDQLIPLTDAVLKEPRLQNGPLFYQIAETLSCWEAKAELSNDNGTDEVFKKLLSEFWGHLLKMCVLHVDTLDADEKSLFAISSMLEILQNPKRATKPNRKSLKIRFRDEDESERNTENGRLTEVRNTDSEMQADLCHSSLLRKEPLENLVCNLAELSIVYVNEQKSEQHLKFLSALLNCFSSNRVFQVLLEQRNDASSAQAESQNEMKGHHESPSVQFLYVNLITWLKEDWRKDTHFLVDVLYSVLNCCNSNDERKIILDDLTKMDLKWIIFLQIIQKACSSTTKLSLVSDWLKGDTLGERLVMLADDLCHLGLKPMAASSESPSSERWTLLSLVLSQHIKNESLIGETFVEKIIDKLQAALSKAKDLSEAGNTEPSVSFICDVASSFFSSVKGCLLMPSSEDLLLTIFQLCAQRQDAMHLTDLLVCKLKHTWMSGVSSLVRQLRSMQKQSTFLHKSALWVKNQIQSSSLDVKSLQVLISAVSDLLSKLMEADGQSGYLVGAYVEHVMPNKTEWGKLRESLSTEWMHKPLLEGRLSMNCEPLRSCVKLCGTTKLPGHLCTSALLSKMVLLVLENGIVHGSDDAERKKIDNIIAELLYSLQWIEELENPPHLLLEYHHMLEEMHITYEKFSTLNNTTSLQQTIFERSEEHGRLWSLTMAKVIRVENTVSCEKKQLFKTTDGFLPLTEGRLHTLQCLSPFLTEEEKKELVFHCVAKLMTCTQTELSSTDGAFGCLSILNSCLNDRSIDCGHLLPGILKIIMSWKNDNEDSFLFSCNLKETSAQLLGFNIEMIRYLPLLLKYSTAPLADNEWDFIMCSMLAWLETTSENRSLYHVPLVQIFACVSCDLASALSAYFEAAAPETTENLPVNLISEWKEFFSEGIHNLLLPLLVKVTGETKNASEGPFQNSVLTSLGEALTYISKDQLLNHKLPAKFVAGQKTNLPDKLQTLLNTLSPLLLFRSRPIQISVYHMLYKLMPELPKFDDEDLKSYGDEEEESALSPPAALMSVLATQELLLENILECIPVGEFAVIQPLSDEFCLVLGYLLTWKLTLAFFKAASSQLRVLYSQYLKRTKSLNKLLYHLFRLMPENPVSSGPTSEVPYIDTKTFFTEELHLDVKGTGVLSSQIPHLACSVYHITLKDLPAMVRLWWNSCEKRVFNVVDKFTSKYVSSVLSSQEITSVQNSTQLLSGMMVKARSAAREVIATYSVEDIFIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMDGLSLWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF
SIO_010081: LTN1
subclass of: SO_0000673
so part of: LTN1
location: complement(join(2891592..2891654,2892447..2892614,2893278..2893472,2894006..2894226,2895361..2895532,2895993..2896179,2897068..2897142,2898085..2898322,2898608..2898821,2900708..2900852,2901752..2901887,2903802..2903944,2904203..2904307,2904474..2904633,2905615..2905816,2906548..2906698,2906982..2907135,2908132..2908371,2910799..2910991,2912017..2912058,2912566..2913348,2913699..2913846,2915162..2915352,2917017..2917190,2917875..2918055,2918496..2918548,2919311..2919541,2920582..2920680,2921012..2921215,2922727..2922768))
location: region:2891592-2922768:-1
so has part: feature:2922727-2922768:-1:exon
so has part: feature:2921012-2921215:-1:exon
so has part: feature:2920582-2920680:-1:exon
so has part: feature:2919311-2919541:-1:exon
so has part: feature:2918496-2918548:-1:exon
so has part: feature:2917875-2918055:-1:exon
so has part: feature:2917017-2917190:-1:exon
so has part: feature:2915162-2915352:-1:exon
so has part: feature:2913699-2913846:-1:exon
so has part: feature:2912566-2913348:-1:exon
so has part: feature:2912017-2912058:-1:exon
so has part: feature:2910799-2910991:-1:exon
so has part: feature:2908132-2908371:-1:exon
so has part: feature:2906982-2907135:-1:exon
so has part: feature:2906548-2906698:-1:exon
so has part: feature:2905615-2905816:-1:exon
so has part: feature:2904474-2904633:-1:exon
so has part: feature:2904203-2904307:-1:exon
so has part: feature:2903802-2903944:-1:exon
so has part: feature:2901752-2901887:-1:exon
so has part: feature:2900708-2900852:-1:exon
so has part: feature:2898608-2898821:-1:exon
so has part: feature:2898085-2898322:-1:exon
so has part: feature:2897068-2897142:-1:exon
so has part: feature:2895993-2896179:-1:exon
so has part: feature:2895361-2895532:-1:exon
so has part: feature:2894006-2894226:-1:exon
so has part: feature:2893278-2893472:-1:exon
so has part: feature:2892447-2892614:-1:exon
so has part: feature:2891592-2891654:-1:exon

XP_049690706.1
type: Protein
SIO_000068: ncbiprotein

position:2891592:-1
position: 2891592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2922768:-1
position: 2922768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2922727-2922768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2921012-2921215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2920582-2920680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2919311-2919541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2918496-2918548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2917875-2918055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2917017-2917190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2915162-2915352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2913699-2913846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2912566-2913348:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2912017-2912058:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2910799-2910991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2908132-2908371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2906982-2907135:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2906548-2906698:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2905615-2905816:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2904474-2904633:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2904203-2904307:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2903802-2903944:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2901752-2901887:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2900708-2900852:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2898608-2898821:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2898085-2898322:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2897068-2897142:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2895993-2896179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2895361-2895532:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2894006-2894226:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2893278-2893472:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2892447-2892614:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2891592-2891654:-1:exon

LTN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: LTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase listerin isoform X2
translation: MVSSMPENQSCFDCWSHVNAKKGVLPKLWTVLREGGRGLATVIYPNLLPFISKVPPGIAEPKLEYFRTFFSSIIQGLSSERAIASPSESSAIITAFMECLRFVILQNLGEEDDQRQIHQMLIYDQLIPLTDAVLKEPRLQNGPLFYQIAETLSCWEAKAELSNDNGTDEVFKKLLSEFWGHLLKMCVLHVDTLDADEKSLFAISSMLEILQNPKRATKPNRKSLKIRFRDEDESERNTENGRLTEVRNTDSEMQADLCHSSLLRKEPLENLVCNLAELSIVYVNEQKSEQHLKFLSALLNCFSSNRVFQVLLEQRNDASSAQAESQNEMKGHHESPSVQFLYVNLITWLKEDWRKDTHFLVDVLYSVLNCCNSNDERKIILDDLTKMDLKWIIFLQIIQKACSSTTKLSLVSDWLKGDTLGERLVMLADDLCHLGLKPMAASSESPSSERWTLLSLVLSQHIKNESLIGETFVEKIIDKLQAALSKAKDLSEAGNTEPSVSFICDVASSFFSSVKGCLLMPSSEDLLLTIFQLCAQRQDAMHLTDLLVCKLKHTWMSGVSSLVRQLRSMQKQSTFLHKSALWVKNQIQSSSLDVKSLQVLISAVSDLLSKLMEADGQSGYLVGAYVEHVMPNKTEWGKLRESLSTEWMHKPLLEGRLSMNCEPLRSCVKLCGTTKLPGHLCTSALLSKMVLLVLENGIVHGSDDAERKKIDNIIAELLYSLQWIEELENPPHLLLEYHHMLEEMHITYEKFSTLNNTTSLQQTIFERSEEHGRLWSLTMAKVIRVENTVSCEKKQLFKTTDGFLPLTEGRLHTLQCLSPFLTEEEKKELVFHCVAKLMTCTQTELSSTDGAFGCLSILNSCLNDRSIDCGHLLPGILKIIMSWKNDNEDSFLFSCNLKETSAQLLGFNIEMIRYLPLLLKYSTAPLADNEWDFIMCSMLAWLETTSENRSLYHVPLVQIFACVSCDLASALSAYFEAAAPETTENLPVNLISEWKEFFSEGIHNLLLPLLVKVTGETKNASEGPFQNSVLTSLGEALTYISKDQLLNHKLPAKFVAGQKTNLPDKLQTLLNTLSPLLLFRSRPIQISVYHMLYKLMPELPKFDDEDLKSYGDEEEESALSPPAALMSVLATQELLLENILECIPVGEFAVIQPLSDEFCLVLGYLLTWKLTLAFFKAASSQLRVLYSQYLKRTKSLNKLLYHLFRLMPENPVSSGPTSEVPYIDTKTFFTEELHLDVKGTGVLSSQIPHLACSVYHITLKDLPAMVRLWWNSCEKRVFNVVDKFTSKYVSSVLSSQEITSVQNSTQLLSGMMVKARSAAREVIATYSVEDIFIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMDGLSLWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETFF
SIO_010081: LTN1
subclass of: SO_0000673
so part of: LTN1
location: complement(join(2891592..2891654,2892447..2892614,2893278..2893472,2894006..2894226,2895361..2895532,2895993..2896179,2897068..2897142,2898085..2898322,2898608..2898821,2900708..2900852,2901752..2901887,2903802..2903944,2904203..2904307,2904474..2904633,2905615..2905816,2906548..2906698,2906982..2907135,2908132..2908371,2910799..2910991,2912017..2912058,2912566..2913348,2913699..2913846,2915162..2915352,2916792..2916827))
location: region:2891592-2916827:-1
so has part: feature:2916792-2916827:-1:exon
so has part: feature:2915162-2915352:-1:exon
so has part: feature:2913699-2913846:-1:exon
so has part: feature:2912566-2913348:-1:exon
so has part: feature:2912017-2912058:-1:exon
so has part: feature:2910799-2910991:-1:exon
so has part: feature:2908132-2908371:-1:exon
so has part: feature:2906982-2907135:-1:exon
so has part: feature:2906548-2906698:-1:exon
so has part: feature:2905615-2905816:-1:exon
so has part: feature:2904474-2904633:-1:exon
so has part: feature:2904203-2904307:-1:exon
so has part: feature:2903802-2903944:-1:exon
so has part: feature:2901752-2901887:-1:exon
so has part: feature:2900708-2900852:-1:exon
so has part: feature:2898608-2898821:-1:exon
so has part: feature:2898085-2898322:-1:exon
so has part: feature:2897068-2897142:-1:exon
so has part: feature:2895993-2896179:-1:exon
so has part: feature:2895361-2895532:-1:exon
so has part: feature:2894006-2894226:-1:exon
so has part: feature:2893278-2893472:-1:exon
so has part: feature:2892447-2892614:-1:exon
so has part: feature:2891592-2891654:-1:exon

XP_049690708.1
type: Protein
SIO_000068: ncbiprotein

position:2916827:-1
position: 2916827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2916792-2916827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2915162-2915352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2913699-2913846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2912566-2913348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912017-2912058:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2910799-2910991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2908132-2908371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2906982-2907135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2906548-2906698:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905615-2905816:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2904474-2904633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2904203-2904307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2903802-2903944:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2901752-2901887:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2900708-2900852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2898608-2898821:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2898085-2898322:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2897068-2897142:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2895993-2896179:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2895361-2895532:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2894006-2894226:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2893278-2893472:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2892447-2892614:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2891592-2891654:-1:exon

RWDD2B
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: RWDD2B
note: RWD domain containing 2B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2923256..2927343)
location: region:2923256-2927343:-1
so has part: feature:2923256-2927343:-1:exon
subclass of: SO_0000010

126053223
type: Gene
SIO_000068: ncbigene

position:2923256:-1
position: 2923256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2927343:-1
position: 2927343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2923256-2927343:-1:exon

RWDD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: RWDD2B
product: RWD domain containing 2B, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835142.1
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2923256..2924424,2925137..2925502,2926215..2926282,2926369..2926587,2927274..2927343))
location: region:2923256-2927343:-1
so has part: feature:2927274-2927343:-1:exon
so has part: feature:2926369-2926587:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2923256-2924424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2927274-2927343:-1:exon

position:2927274:-1
position: 2927274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2926369-2926587:-1:exon

position:2926369:-1
position: 2926369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926587:-1
position: 2926587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2926215-2926282:-1:exon

position:2926215:-1
position: 2926215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926282:-1
position: 2926282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2925137-2925502:-1:exon

position:2925137:-1
position: 2925137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2925502:-1
position: 2925502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2923256-2924424:-1:exon

position:2924424:-1
position: 2924424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RWDD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: RWDD2B
product: RWD domain containing 2B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835137.1
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2923256..2924424,2925137..2925502,2926215..2926282,2926369..2926587,2927318..2927335))
location: region:2923256-2927335:-1
so has part: feature:2927318-2927335:-1:exon
so has part: feature:2926369-2926587:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2923256-2924424:-1:exon

position:2927335:-1
position: 2927335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2927318-2927335:-1:exon

position:2927318:-1
position: 2927318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2926369-2926587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2923256-2924424:-1:exon

RWDD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: RWDD2B
product: RWD domain containing 2B, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835140.1
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2923256..2924424,2925137..2925502,2926215..2926282,2926369..2926587,2926773..2926977))
location: region:2923256-2926977:-1
so has part: feature:2926773-2926977:-1:exon
so has part: feature:2926369-2926587:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2923256-2924424:-1:exon

position:2926977:-1
position: 2926977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926773-2926977:-1:exon

position:2926773:-1
position: 2926773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2926369-2926587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2923256-2924424:-1:exon

RWDD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: RWDD2B
product: RWD domain containing 2B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835138.1
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2923256..2924424,2925137..2925502,2926215..2926282,2926369..2926577,2926773..2926890))
location: region:2923256-2926890:-1
so has part: feature:2926773-2926890:-1:exon
so has part: feature:2926369-2926577:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2923256-2924424:-1:exon

position:2926890:-1
position: 2926890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926773-2926890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2926369-2926577:-1:exon

position:2926577:-1
position: 2926577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2923256-2924424:-1:exon

RWDD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: RWDD2B
product: RWD domain containing 2B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835136.1
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2923256..2924424,2925137..2925502,2926215..2926282,2926369..2926587,2926708..2926865))
location: region:2923256-2926865:-1
so has part: feature:2926708-2926865:-1:exon
so has part: feature:2926369-2926587:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2923256-2924424:-1:exon

position:2926865:-1
position: 2926865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926708-2926865:-1:exon

position:2926708:-1
position: 2926708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2926369-2926587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2923256-2924424:-1:exon

RWDD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: RWDD2B
product: RWD domain containing 2B, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835139.1
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2923256..2924424,2925137..2925502,2926215..2926282,2926417..2926865))
location: region:2923256-2926865:-1
so has part: feature:2926417-2926865:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2923256-2924424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2926417-2926865:-1:exon

position:2926417:-1
position: 2926417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2923256-2924424:-1:exon

RWDD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: RWDD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RWD domain-containing protein 2B isoform X2
translation: MSNREEAEIQLSELDLLSSMFPYEEEFVVTDQLAVAELKHYAENESAEMPSSKVEFSMACALPFKYPTVLPEITVRSSALSRSQQIHLNSDLKTYLMQNSSGEPCMLSAREWVKDHAAAYIGKERLSSSVTTSNAMQSEDNTFTRLWIYSHHIYNKQKRKNIIDWAKELALSGFCMPGKPGVVCVEGLQSSCEEFWSRVRRLTWKRILIRHREDVSLEGGGHAEIQKQRKFSTLEEKCFDAHGARGNHMDLGQLYHFLEEKGCADIFQMYFGVEGH
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2924187..2924424,2925137..2925502,2926215..2926282,2926417..2926575))
location: region:2924187-2926575:-1
so has part: feature:2926417-2926575:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2924187-2924424:-1:exon

XP_049691096.1
type: Protein
SIO_000068: ncbiprotein

position:2924187:-1
position: 2924187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926575:-1
position: 2926575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926417-2926575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2924187-2924424:-1:exon

RWDD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: RWDD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RWD domain-containing protein 2B isoform X1
translation: MSNREEAEIQLSELDLLSSMFPYEEEFVVTDQLAVAELKHYAENESAEMPSSKVQFVLNVKPEVTNASMVEFSMACALPFKYPTVLPEITVRSSALSRSQQIHLNSDLKTYLMQNSSGEPCMLSAREWVKDHAAAYIGKERLSSSVTTSNAMQSEDNTFTRLWIYSHHIYNKQKRKNIIDWAKELALSGFCMPGKPGVVCVEGLQSSCEEFWSRVRRLTWKRILIRHREDVSLEGGGHAEIQKQRKFSTLEEKCFDAHGARGNHMDLGQLYHFLEEKGCADIFQMYFGVEGH
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2924187..2924424,2925137..2925502,2926215..2926282,2926369..2926575))
location: region:2924187-2926575:-1
so has part: feature:2926369-2926575:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2924187-2924424:-1:exon

XP_049691093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2926369-2926575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2924187-2924424:-1:exon

RWDD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: RWDD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RWD domain-containing protein 2B isoform X1
translation: MSNREEAEIQLSELDLLSSMFPYEEEFVVTDQLAVAELKHYAENESAEMPSSKVQFVLNVKPEVTNASMVEFSMACALPFKYPTVLPEITVRSSALSRSQQIHLNSDLKTYLMQNSSGEPCMLSAREWVKDHAAAYIGKERLSSSVTTSNAMQSEDNTFTRLWIYSHHIYNKQKRKNIIDWAKELALSGFCMPGKPGVVCVEGLQSSCEEFWSRVRRLTWKRILIRHREDVSLEGGGHAEIQKQRKFSTLEEKCFDAHGARGNHMDLGQLYHFLEEKGCADIFQMYFGVEGH
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2924187..2924424,2925137..2925502,2926215..2926282,2926369..2926575))
location: region:2924187-2926575:-1
so has part: feature:2926369-2926575:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2924187-2924424:-1:exon

XP_049691094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2926369-2926575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2924187-2924424:-1:exon

RWDD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: RWDD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RWD domain-containing protein 2B isoform X1
translation: MSNREEAEIQLSELDLLSSMFPYEEEFVVTDQLAVAELKHYAENESAEMPSSKVQFVLNVKPEVTNASMVEFSMACALPFKYPTVLPEITVRSSALSRSQQIHLNSDLKTYLMQNSSGEPCMLSAREWVKDHAAAYIGKERLSSSVTTSNAMQSEDNTFTRLWIYSHHIYNKQKRKNIIDWAKELALSGFCMPGKPGVVCVEGLQSSCEEFWSRVRRLTWKRILIRHREDVSLEGGGHAEIQKQRKFSTLEEKCFDAHGARGNHMDLGQLYHFLEEKGCADIFQMYFGVEGH
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2924187..2924424,2925137..2925502,2926215..2926282,2926369..2926575))
location: region:2924187-2926575:-1
so has part: feature:2926369-2926575:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2924187-2924424:-1:exon

XP_049691095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2926369-2926575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2924187-2924424:-1:exon

RWDD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: RWDD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RWD domain-containing protein 2B isoform X1
translation: MSNREEAEIQLSELDLLSSMFPYEEEFVVTDQLAVAELKHYAENESAEMPSSKVQFVLNVKPEVTNASMVEFSMACALPFKYPTVLPEITVRSSALSRSQQIHLNSDLKTYLMQNSSGEPCMLSAREWVKDHAAAYIGKERLSSSVTTSNAMQSEDNTFTRLWIYSHHIYNKQKRKNIIDWAKELALSGFCMPGKPGVVCVEGLQSSCEEFWSRVRRLTWKRILIRHREDVSLEGGGHAEIQKQRKFSTLEEKCFDAHGARGNHMDLGQLYHFLEEKGCADIFQMYFGVEGH
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2924187..2924424,2925137..2925502,2926215..2926282,2926369..2926575))
location: region:2924187-2926575:-1
so has part: feature:2926369-2926575:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2924187-2924424:-1:exon

XP_049691097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2926369-2926575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2924187-2924424:-1:exon

RWDD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: RWDD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RWD domain-containing protein 2B isoform X1
translation: MSNREEAEIQLSELDLLSSMFPYEEEFVVTDQLAVAELKHYAENESAEMPSSKVQFVLNVKPEVTNASMVEFSMACALPFKYPTVLPEITVRSSALSRSQQIHLNSDLKTYLMQNSSGEPCMLSAREWVKDHAAAYIGKERLSSSVTTSNAMQSEDNTFTRLWIYSHHIYNKQKRKNIIDWAKELALSGFCMPGKPGVVCVEGLQSSCEEFWSRVRRLTWKRILIRHREDVSLEGGGHAEIQKQRKFSTLEEKCFDAHGARGNHMDLGQLYHFLEEKGCADIFQMYFGVEGH
SIO_010081: RWDD2B
subclass of: SO_0000673
so part of: RWDD2B
location: complement(join(2924187..2924424,2925137..2925502,2926215..2926282,2926369..2926575))
location: region:2924187-2926575:-1
so has part: feature:2926369-2926575:-1:exon
so has part: feature:2926215-2926282:-1:exon
so has part: feature:2925137-2925502:-1:exon
so has part: feature:2924187-2924424:-1:exon

XP_049691099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2926369-2926575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2926215-2926282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2925137-2925502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2924187-2924424:-1:exon

USP16
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: USP16
note: ubiquitin specific peptidase 16; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2927047..2948428
location: region:2927047-2948428:1
so has part: feature:2927047-2948428:1:exon
subclass of: SO_0000010

126053218
type: Gene
SIO_000068: ncbigene

position:2927047:1
position: 2927047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948428:1
position: 2948428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2927047-2948428:1:exon

USP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: USP16
product: ubiquitin specific peptidase 16, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835120.1
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2927047..2927231,2929328..2929433,2931989..2932167,2932809..2932912,2935314..2935417,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948428)
location: region:2927047-2948428:1
so has part: feature:2927047-2927231:1:exon
so has part: feature:2929328-2929433:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935314-2935417:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2927047-2927231:1:exon

position:2927231:1
position: 2927231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2929328-2929433:1:exon

position:2929328:1
position: 2929328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2929433:1
position: 2929433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2931989-2932167:1:exon

position:2931989:1
position: 2931989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2932167:1
position: 2932167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2932809-2932912:1:exon

position:2932809:1
position: 2932809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2932912:1
position: 2932912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2935314-2935417:1:exon

position:2935314:1
position: 2935314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2935417:1
position: 2935417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2937365-2937546:1:exon

position:2937365:1
position: 2937365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937546:1
position: 2937546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2938516-2938608:1:exon

position:2938516:1
position: 2938516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2938608:1
position: 2938608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2939276-2939406:1:exon

position:2939276:1
position: 2939276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939406:1
position: 2939406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2939780-2939867:1:exon

position:2939780:1
position: 2939780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939867:1
position: 2939867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2940753-2940831:1:exon

position:2940753:1
position: 2940753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2940831:1
position: 2940831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2941706-2941797:1:exon

position:2941706:1
position: 2941706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2941797:1
position: 2941797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2942770-2942826:1:exon

position:2942770:1
position: 2942770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2942826:1
position: 2942826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2943994-2944161:1:exon

position:2943994:1
position: 2943994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944161:1
position: 2944161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2944773-2945445:1:exon

position:2944773:1
position: 2944773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945445:1
position: 2945445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2946111-2946205:1:exon

position:2946111:1
position: 2946111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2946205:1
position: 2946205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2947436-2947522:1:exon

position:2947436:1
position: 2947436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947522:1
position: 2947522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2947827-2947983:1:exon

position:2947827:1
position: 2947827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947983:1
position: 2947983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2948097-2948428:1:exon

position:2948097:1
position: 2948097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: USP16
product: ubiquitin specific peptidase 16, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835123.1
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2927047..2927231,2929328..2929433,2931989..2932167,2932809..2932912,2935314..2935417,2937368..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948428)
location: region:2927047-2948428:1
so has part: feature:2927047-2927231:1:exon
so has part: feature:2929328-2929433:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935314-2935417:1:exon
so has part: feature:2937368-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2927047-2927231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2929328-2929433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2935314-2935417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2937368-2937546:1:exon

position:2937368:1
position: 2937368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2948097-2948428:1:exon

USP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: USP16
product: ubiquitin specific peptidase 16, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835121.1
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2927336..2927374,2929328..2929433,2931989..2932167,2932809..2932912,2935314..2935417,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948428)
location: region:2927336-2948428:1
so has part: feature:2927336-2927374:1:exon
so has part: feature:2929328-2929433:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935314-2935417:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948428:1:exon

position:2927336:1
position: 2927336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2927336-2927374:1:exon

position:2927374:1
position: 2927374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2929328-2929433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2935314-2935417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2948097-2948428:1:exon

USP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: USP16
product: ubiquitin specific peptidase 16, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835122.1
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2927459..2927526,2929328..2929433,2931989..2932167,2932809..2932912,2935314..2935417,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948428)
location: region:2927459-2948428:1
so has part: feature:2927459-2927526:1:exon
so has part: feature:2929328-2929433:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935314-2935417:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948428:1:exon

position:2927459:1
position: 2927459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2927459-2927526:1:exon

position:2927526:1
position: 2927526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2929328-2929433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2935314-2935417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2948097-2948428:1:exon

USP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: USP16
product: ubiquitin specific peptidase 16, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835124.1
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2929326..2929433,2931565..2931680,2931989..2932167,2932809..2932912,2935310..2935417,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948428)
location: region:2929326-2948428:1
so has part: feature:2929326-2929433:1:exon
so has part: feature:2931565-2931680:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935310-2935417:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948428:1:exon

position:2929326:1
position: 2929326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2929326-2929433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2931565-2931680:1:exon

position:2931565:1
position: 2931565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2931680:1
position: 2931680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2935310-2935417:1:exon

position:2935310:1
position: 2935310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2948097-2948428:1:exon

USP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: USP16
product: ubiquitin specific peptidase 16, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835126.1
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2929326..2929433,2931565..2931680,2931989..2932167,2932809..2932912,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948428)
location: region:2929326-2948428:1
so has part: feature:2929326-2929433:1:exon
so has part: feature:2931565-2931680:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2929326-2929433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2931565-2931680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2948097-2948428:1:exon

USP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: USP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 16 isoform X1
translation: MGKKRIKGKTAQSDETLDMEYVAPVCKHIRKGLEQGHLKKALLNVEWRVCQDCKADNKTQEKSEEETDESPSIWLCLKCGHRGCGRNSQEQHALKHYATPRSDPHCLVLSLDNWSVWCYICDNEVPYSTSTRLGQIVDYVRKQVCIDSSCTVEKQEENKEFENKKVEKDSKNEQEKEVSLKEENSHPSTNSQVAVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMRGTTVKIESPELFMEPQLIKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELLRYLLDGMRAEEIQQVSVGILKALTDSNKQNEEELKKKIKEYEKKKGIQSVVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKVKITNERNIKKNKEKESEDEEDKNNDCYLKQRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLRLTDICATEQSEKDIEYNQESEAEINSETPDRKREEESSNDGRDHCLTQKDLSVQGSSTEVQSMHENRGKPEQECIESESLMDLPMEGLDSPMKFVNGLDNLSLKDEDDENKDEEELATDFSELHLGANDESDTSTLDDLQTVPVKTCEVSTEDPETAFCTLANREGLNPEEGSIHHCLYQFTRNEKLTETNKLLCDVCTQRHYGPKKNVKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTAKCKNVAEGNTEVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNNHLSDLVLRGQSPQALETEPVNGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2929367..2929433,2931989..2932167,2932809..2932912,2935314..2935417,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948221)
location: region:2929367-2948221:1
so has part: feature:2929367-2929433:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935314-2935417:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948221:1:exon

XP_049691077.1
type: Protein
SIO_000068: ncbiprotein

position:2929367:1
position: 2929367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948221:1
position: 2948221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2929367-2929433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2935314-2935417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2948097-2948221:1:exon

USP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: USP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 16 isoform X1
translation: MGKKRIKGKTAQSDETLDMEYVAPVCKHIRKGLEQGHLKKALLNVEWRVCQDCKADNKTQEKSEEETDESPSIWLCLKCGHRGCGRNSQEQHALKHYATPRSDPHCLVLSLDNWSVWCYICDNEVPYSTSTRLGQIVDYVRKQVCIDSSCTVEKQEENKEFENKKVEKDSKNEQEKEVSLKEENSHPSTNSQVAVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMRGTTVKIESPELFMEPQLIKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELLRYLLDGMRAEEIQQVSVGILKALTDSNKQNEEELKKKIKEYEKKKGIQSVVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKVKITNERNIKKNKEKESEDEEDKNNDCYLKQRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLRLTDICATEQSEKDIEYNQESEAEINSETPDRKREEESSNDGRDHCLTQKDLSVQGSSTEVQSMHENRGKPEQECIESESLMDLPMEGLDSPMKFVNGLDNLSLKDEDDENKDEEELATDFSELHLGANDESDTSTLDDLQTVPVKTCEVSTEDPETAFCTLANREGLNPEEGSIHHCLYQFTRNEKLTETNKLLCDVCTQRHYGPKKNVKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTAKCKNVAEGNTEVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNNHLSDLVLRGQSPQALETEPVNGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2929367..2929433,2931989..2932167,2932809..2932912,2935314..2935417,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948221)
location: region:2929367-2948221:1
so has part: feature:2929367-2929433:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935314-2935417:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948221:1:exon

XP_049691078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2929367-2929433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2935314-2935417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2948097-2948221:1:exon

USP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: USP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 16 isoform X1
translation: MGKKRIKGKTAQSDETLDMEYVAPVCKHIRKGLEQGHLKKALLNVEWRVCQDCKADNKTQEKSEEETDESPSIWLCLKCGHRGCGRNSQEQHALKHYATPRSDPHCLVLSLDNWSVWCYICDNEVPYSTSTRLGQIVDYVRKQVCIDSSCTVEKQEENKEFENKKVEKDSKNEQEKEVSLKEENSHPSTNSQVAVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMRGTTVKIESPELFMEPQLIKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELLRYLLDGMRAEEIQQVSVGILKALTDSNKQNEEELKKKIKEYEKKKGIQSVVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKVKITNERNIKKNKEKESEDEEDKNNDCYLKQRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLRLTDICATEQSEKDIEYNQESEAEINSETPDRKREEESSNDGRDHCLTQKDLSVQGSSTEVQSMHENRGKPEQECIESESLMDLPMEGLDSPMKFVNGLDNLSLKDEDDENKDEEELATDFSELHLGANDESDTSTLDDLQTVPVKTCEVSTEDPETAFCTLANREGLNPEEGSIHHCLYQFTRNEKLTETNKLLCDVCTQRHYGPKKNVKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTAKCKNVAEGNTEVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNNHLSDLVLRGQSPQALETEPVNGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2929367..2929433,2931989..2932167,2932809..2932912,2935314..2935417,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948221)
location: region:2929367-2948221:1
so has part: feature:2929367-2929433:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935314-2935417:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948221:1:exon

XP_049691079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2929367-2929433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2935314-2935417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2948097-2948221:1:exon

USP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: USP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 16 isoform X2
translation: MGKKRIKGKTAQSDETLDMEYVAPVCKHIRKGLEQGHLKKALLNVEWRVCQDCKADNKTQEKSEEETDESPSIWLCLKCGHRGCGRNSQEQHALKHYATPRSDPHCLVLSLDNWSVWCYICDNEVPYSTSTRLGQIVDYVRKQVCIDSSCTEKQEENKEFENKKVEKDSKNEQEKEVSLKEENSHPSTNSQVAVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMRGTTVKIESPELFMEPQLIKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELLRYLLDGMRAEEIQQVSVGILKALTDSNKQNEEELKKKIKEYEKKKGIQSVVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKVKITNERNIKKNKEKESEDEEDKNNDCYLKQRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLRLTDICATEQSEKDIEYNQESEAEINSETPDRKREEESSNDGRDHCLTQKDLSVQGSSTEVQSMHENRGKPEQECIESESLMDLPMEGLDSPMKFVNGLDNLSLKDEDDENKDEEELATDFSELHLGANDESDTSTLDDLQTVPVKTCEVSTEDPETAFCTLANREGLNPEEGSIHHCLYQFTRNEKLTETNKLLCDVCTQRHYGPKKNVKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTAKCKNVAEGNTEVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNNHLSDLVLRGQSPQALETEPVNGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2929367..2929433,2931989..2932167,2932809..2932912,2935314..2935417,2937368..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948221)
location: region:2929367-2948221:1
so has part: feature:2929367-2929433:1:exon
so has part: feature:2931989-2932167:1:exon
so has part: feature:2932809-2932912:1:exon
so has part: feature:2935314-2935417:1:exon
so has part: feature:2937368-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948221:1:exon

XP_049691080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2929367-2929433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2931989-2932167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2932809-2932912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2935314-2935417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2937368-2937546:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2948097-2948221:1:exon

USP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: USP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 16 isoform X3
translation: MQRQDQIPIVWFSVWTTGVCGRCYICDNEVPYSTSTRLGQIVDYVRKQVCIDSSCTVEKQEENKEFENKKVEKDSKNEQEKEVSLKEENSHPSTNSQVAVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMRGTTVKIESPELFMEPQLIKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELLRYLLDGMRAEEIQQVSVGILKALTDSNKQNEEELKKKIKEYEKKKGIQSVVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKVKITNERNIKKNKEKESEDEEDKNNDCYLKQRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLRLTDICATEQSEKDIEYNQESEAEINSETPDRKREEESSNDGRDHCLTQKDLSVQGSSTEVQSMHENRGKPEQECIESESLMDLPMEGLDSPMKFVNGLDNLSLKDEDDENKDEEELATDFSELHLGANDESDTSTLDDLQTVPVKTCEVSTEDPETAFCTLANREGLNPEEGSIHHCLYQFTRNEKLTETNKLLCDVCTQRHYGPKKNVKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTAKCKNVAEGNTEVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNNHLSDLVLRGQSPQALETEPVNGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2932852..2932912,2935310..2935417,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948221)
location: region:2932852-2948221:1
so has part: feature:2932852-2932912:1:exon
so has part: feature:2935310-2935417:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948221:1:exon

XP_049691081.1
type: Protein
SIO_000068: ncbiprotein

position:2932852:1
position: 2932852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2932852-2932912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2935310-2935417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2948097-2948221:1:exon

USP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: USP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 16 isoform X5
translation: MQRQDQIPIVWFSVWTTGVCVEKQEENKEFENKKVEKDSKNEQEKEVSLKEENSHPSTNSQVAVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMRGTTVKIESPELFMEPQLIKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELLRYLLDGMRAEEIQQVSVGILKALTDSNKQNEEELKKKIKEYEKKKGIQSVVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKVKITNERNIKKNKEKESEDEEDKNNDCYLKQRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLRLTDICATEQSEKDIEYNQESEAEINSETPDRKREEESSNDGRDHCLTQKDLSVQGSSTEVQSMHENRGKPEQECIESESLMDLPMEGLDSPMKFVNGLDNLSLKDEDDENKDEEELATDFSELHLGANDESDTSTLDDLQTVPVKTCEVSTEDPETAFCTLANREGLNPEEGSIHHCLYQFTRNEKLTETNKLLCDVCTQRHYGPKKNVKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTAKCKNVAEGNTEVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNNHLSDLVLRGQSPQALETEPVNGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2932852..2932912,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948221)
location: region:2932852-2948221:1
so has part: feature:2932852-2932912:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948221:1:exon

XP_049691083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2932852-2932912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2948097-2948221:1:exon

USP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: USP16
product: ubiquitin specific peptidase 16, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835125.1
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2935977..2936063,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948428)
location: region:2935977-2948428:1
so has part: feature:2935977-2936063:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948428:1:exon

position:2935977:1
position: 2935977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2935977-2936063:1:exon

position:2936063:1
position: 2936063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2948097-2948428:1:exon

USP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: USP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 16 isoform X4
translation: MTKSPAVAAHLLMEGVHKKICLLVEKQEENKEFENKKVEKDSKNEQEKEVSLKEENSHPSTNSQVAVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMRGTTVKIESPELFMEPQLIKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELLRYLLDGMRAEEIQQVSVGILKALTDSNKQNEEELKKKIKEYEKKKGIQSVVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKVKITNERNIKKNKEKESEDEEDKNNDCYLKQRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLRLTDICATEQSEKDIEYNQESEAEINSETPDRKREEESSNDGRDHCLTQKDLSVQGSSTEVQSMHENRGKPEQECIESESLMDLPMEGLDSPMKFVNGLDNLSLKDEDDENKDEEELATDFSELHLGANDESDTSTLDDLQTVPVKTCEVSTEDPETAFCTLANREGLNPEEGSIHHCLYQFTRNEKLTETNKLLCDVCTQRHYGPKKNVKSEKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTAKCKNVAEGNTEVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNNHLSDLVLRGQSPQALETEPVNGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
SIO_010081: USP16
subclass of: SO_0000673
so part of: USP16
location: join(2935994..2936063,2937365..2937546,2938516..2938608,2939276..2939406,2939780..2939867,2940753..2940831,2941706..2941797,2942770..2942826,2943994..2944161,2944773..2945445,2946111..2946205,2947436..2947522,2947827..2947983,2948097..2948221)
location: region:2935994-2948221:1
so has part: feature:2935994-2936063:1:exon
so has part: feature:2937365-2937546:1:exon
so has part: feature:2938516-2938608:1:exon
so has part: feature:2939276-2939406:1:exon
so has part: feature:2939780-2939867:1:exon
so has part: feature:2940753-2940831:1:exon
so has part: feature:2941706-2941797:1:exon
so has part: feature:2942770-2942826:1:exon
so has part: feature:2943994-2944161:1:exon
so has part: feature:2944773-2945445:1:exon
so has part: feature:2946111-2946205:1:exon
so has part: feature:2947436-2947522:1:exon
so has part: feature:2947827-2947983:1:exon
so has part: feature:2948097-2948221:1:exon

XP_049691082.1
type: Protein
SIO_000068: ncbiprotein

position:2935994:1
position: 2935994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2935994-2936063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2937365-2937546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2938516-2938608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2939276-2939406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2939780-2939867:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2940753-2940831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2941706-2941797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2942770-2942826:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2943994-2944161:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2944773-2945445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2946111-2946205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2947436-2947522:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2947827-2947983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2948097-2948221:1:exon

CCT8
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: CCT8
note: chaperonin containing TCP1 subunit 8; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2950702..2962351)
location: region:2950702-2962351:-1
so has part: feature:2950702-2962351:-1:exon
subclass of: SO_0000010

126053221
type: Gene
SIO_000068: ncbigene

position:2950702:-1
position: 2950702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962351:-1
position: 2962351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2950702-2962351:-1:exon

CCT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: CCT8
product: chaperonin containing TCP1 subunit 8, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835133.1
SIO_010081: CCT8
subclass of: SO_0000673
so part of: CCT8
location: complement(join(2950702..2950937,2952118..2952237,2952670..2952834,2953035..2953106,2954394..2954509,2954620..2954707,2954790..2954856,2955820..2955998,2956440..2956577,2957214..2957275,2958006..2958186,2958454..2958603,2959798..2959877,2960503..2960593,2962204..2962351))
location: region:2950702-2962351:-1
so has part: feature:2962204-2962351:-1:exon
so has part: feature:2960503-2960593:-1:exon
so has part: feature:2959798-2959877:-1:exon
so has part: feature:2958454-2958603:-1:exon
so has part: feature:2958006-2958186:-1:exon
so has part: feature:2957214-2957275:-1:exon
so has part: feature:2956440-2956577:-1:exon
so has part: feature:2955820-2955998:-1:exon
so has part: feature:2954790-2954856:-1:exon
so has part: feature:2954620-2954707:-1:exon
so has part: feature:2954394-2954509:-1:exon
so has part: feature:2953035-2953106:-1:exon
so has part: feature:2952670-2952834:-1:exon
so has part: feature:2952118-2952237:-1:exon
so has part: feature:2950702-2950937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2962204-2962351:-1:exon

position:2962204:-1
position: 2962204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2960503-2960593:-1:exon

position:2960503:-1
position: 2960503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2960593:-1
position: 2960593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2959798-2959877:-1:exon

position:2959798:-1
position: 2959798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2959877:-1
position: 2959877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2958454-2958603:-1:exon

position:2958454:-1
position: 2958454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958603:-1
position: 2958603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2958006-2958186:-1:exon

position:2958006:-1
position: 2958006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958186:-1
position: 2958186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2957214-2957275:-1:exon

position:2957214:-1
position: 2957214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2957275:-1
position: 2957275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2956440-2956577:-1:exon

position:2956440:-1
position: 2956440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2956577:-1
position: 2956577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2955820-2955998:-1:exon

position:2955820:-1
position: 2955820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955998:-1
position: 2955998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2954790-2954856:-1:exon

position:2954790:-1
position: 2954790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954856:-1
position: 2954856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2954620-2954707:-1:exon

position:2954620:-1
position: 2954620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954707:-1
position: 2954707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2954394-2954509:-1:exon

position:2954394:-1
position: 2954394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954509:-1
position: 2954509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2953035-2953106:-1:exon

position:2953035:-1
position: 2953035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2953106:-1
position: 2953106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2952670-2952834:-1:exon

position:2952670:-1
position: 2952670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952834:-1
position: 2952834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2952118-2952237:-1:exon

position:2952118:-1
position: 2952118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952237:-1
position: 2952237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2950702-2950937:-1:exon

position:2950937:-1
position: 2950937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: CCT8
product: chaperonin containing TCP1 subunit 8, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835132.1
SIO_010081: CCT8
subclass of: SO_0000673
so part of: CCT8
location: complement(join(2950702..2950937,2951597..2951695,2952118..2952237,2952670..2952834,2953035..2953106,2954394..2954509,2954620..2954707,2954790..2954856,2955820..2955998,2956440..2956577,2957214..2957275,2958006..2958186,2958454..2958603,2959798..2959877,2960503..2960593,2962204..2962351))
location: region:2950702-2962351:-1
so has part: feature:2962204-2962351:-1:exon
so has part: feature:2960503-2960593:-1:exon
so has part: feature:2959798-2959877:-1:exon
so has part: feature:2958454-2958603:-1:exon
so has part: feature:2958006-2958186:-1:exon
so has part: feature:2957214-2957275:-1:exon
so has part: feature:2956440-2956577:-1:exon
so has part: feature:2955820-2955998:-1:exon
so has part: feature:2954790-2954856:-1:exon
so has part: feature:2954620-2954707:-1:exon
so has part: feature:2954394-2954509:-1:exon
so has part: feature:2953035-2953106:-1:exon
so has part: feature:2952670-2952834:-1:exon
so has part: feature:2952118-2952237:-1:exon
so has part: feature:2951597-2951695:-1:exon
so has part: feature:2950702-2950937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2962204-2962351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2960503-2960593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2959798-2959877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2958454-2958603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2958006-2958186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2957214-2957275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2956440-2956577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2955820-2955998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2954790-2954856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2954620-2954707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2954394-2954509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2953035-2953106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2952670-2952834:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2952118-2952237:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2951597-2951695:-1:exon

position:2951597:-1
position: 2951597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951695:-1
position: 2951695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2950702-2950937:-1:exon

CCT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: CCT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit theta isoform X2
translation: MALHVPKAPGFAQMLKEGAKHYSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMLVMASHMQEQEVGDGTNFVLVFAGVLLELAEDLLRMGLSVSEVIEGYEKACKKALEILPDLVCCSAKNLRDVEEVASLLHTSVMSKQYGNERFLAKLIAQACVSILPDSGHFNVDNIRVCKIVGAGISASSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITETKGTVLIKNAEELMNFSKGEENLMDLQVKAIADSGANVVVTGGKVADMALHYANKYNLMLVRLNSKWDLRRLCKTVGATALPRLTPPTLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTILIRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLDQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGFDIEAEAAAVKDMLEAGVLDTYLGKSWGIKLATNAAVTVLRVDQIIMAKPAGGPKPPSGRKDWDEDQND
SIO_010081: CCT8
subclass of: SO_0000673
so part of: CCT8
location: complement(join(2950860..2950937,2952118..2952237,2952670..2952834,2953035..2953106,2954394..2954509,2954620..2954707,2954790..2954856,2955820..2955998,2956440..2956577,2957214..2957275,2958006..2958186,2958454..2958603,2959798..2959877,2960503..2960593,2962204..2962263))
location: region:2950860-2962263:-1
so has part: feature:2962204-2962263:-1:exon
so has part: feature:2960503-2960593:-1:exon
so has part: feature:2959798-2959877:-1:exon
so has part: feature:2958454-2958603:-1:exon
so has part: feature:2958006-2958186:-1:exon
so has part: feature:2957214-2957275:-1:exon
so has part: feature:2956440-2956577:-1:exon
so has part: feature:2955820-2955998:-1:exon
so has part: feature:2954790-2954856:-1:exon
so has part: feature:2954620-2954707:-1:exon
so has part: feature:2954394-2954509:-1:exon
so has part: feature:2953035-2953106:-1:exon
so has part: feature:2952670-2952834:-1:exon
so has part: feature:2952118-2952237:-1:exon
so has part: feature:2950860-2950937:-1:exon

XP_049691090.1
type: Protein
SIO_000068: ncbiprotein

position:2950860:-1
position: 2950860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962263:-1
position: 2962263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962204-2962263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2960503-2960593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2959798-2959877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2958454-2958603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2958006-2958186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2957214-2957275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2956440-2956577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2955820-2955998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2954790-2954856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2954620-2954707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2954394-2954509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2953035-2953106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2952670-2952834:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2952118-2952237:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2950860-2950937:-1:exon

CCT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: CCT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit theta isoform X1
translation: MALHVPKAPGFAQMLKEGAKHYSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMLVMASHMQEQEVGDGTNFVLVFAGVLLELAEDLLRMGLSVSEVIEGYEKACKKALEILPDLVCCSAKNLRDVEEVASLLHTSVMSKQYGNERFLAKLIAQACVSILPDSGHFNVDNIRVCKIVGAGISASSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITETKGTVLIKNAEELMNFSKGEENLMDLQVKAIADSGANVVVTGGKVADMALHYANKYNLMLVRLNSKWDLRRLCKTVGATALPRLTPPTLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTILIRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLDQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGFDIEAEAAAVKDMLEAGVLDTYLGKSWGIKLATNAAVTVLRVDQIIMAKTAGGPKAPKQQGHWDKDDWKDEPEK
SIO_010081: CCT8
subclass of: SO_0000673
so part of: CCT8
location: complement(join(2951603..2951695,2952118..2952237,2952670..2952834,2953035..2953106,2954394..2954509,2954620..2954707,2954790..2954856,2955820..2955998,2956440..2956577,2957214..2957275,2958006..2958186,2958454..2958603,2959798..2959877,2960503..2960593,2962204..2962263))
location: region:2951603-2962263:-1
so has part: feature:2962204-2962263:-1:exon
so has part: feature:2960503-2960593:-1:exon
so has part: feature:2959798-2959877:-1:exon
so has part: feature:2958454-2958603:-1:exon
so has part: feature:2958006-2958186:-1:exon
so has part: feature:2957214-2957275:-1:exon
so has part: feature:2956440-2956577:-1:exon
so has part: feature:2955820-2955998:-1:exon
so has part: feature:2954790-2954856:-1:exon
so has part: feature:2954620-2954707:-1:exon
so has part: feature:2954394-2954509:-1:exon
so has part: feature:2953035-2953106:-1:exon
so has part: feature:2952670-2952834:-1:exon
so has part: feature:2952118-2952237:-1:exon
so has part: feature:2951603-2951695:-1:exon

XP_049691089.1
type: Protein
SIO_000068: ncbiprotein

position:2951603:-1
position: 2951603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962204-2962263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2960503-2960593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2959798-2959877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2958454-2958603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2958006-2958186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2957214-2957275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2956440-2956577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2955820-2955998:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2954790-2954856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2954620-2954707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2954394-2954509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2953035-2953106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2952670-2952834:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2952118-2952237:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2951603-2951695:-1:exon

MAP3K7CL
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: MAP3K7CL
note: MAP3K7 C-terminal like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2976935..3012238
location: region:2976935-3012238:1
so has part: feature:2976935-3012238:1:exon
subclass of: SO_0000010

126053086
type: Gene
SIO_000068: ncbigene

position:2976935:1
position: 2976935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3012238:1
position: 3012238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2976935-3012238:1:exon

MAP3K7CL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: MAP3K7CL
product: MAP3K7 C-terminal like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_049834733.1
SIO_010081: MAP3K7CL
subclass of: SO_0000673
so part of: MAP3K7CL
location: join(2976935..2977046,2978455..2978603,2981415..2981523,2990264..2990322,2999877..2999992,3008331..3012238)
location: region:2976935-3012238:1
so has part: feature:2976935-2977046:1:exon
so has part: feature:2978455-2978603:1:exon
so has part: feature:2981415-2981523:1:exon
so has part: feature:2990264-2990322:1:exon
so has part: feature:2999877-2999992:1:exon
so has part: feature:3008331-3012238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2976935-2977046:1:exon

position:2977046:1
position: 2977046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2978455-2978603:1:exon

position:2978455:1
position: 2978455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2978603:1
position: 2978603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2981415-2981523:1:exon

position:2981415:1
position: 2981415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2981523:1
position: 2981523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2990264-2990322:1:exon

position:2990264:1
position: 2990264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2990322:1
position: 2990322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2999877-2999992:1:exon

position:2999877:1
position: 2999877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2999992:1
position: 2999992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3008331-3012238:1:exon

position:3008331:1
position: 3008331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K7CL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: MAP3K7CL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP3K7 C-terminal-like protein
translation: MVVIRDKSLSLPFQRRHIGRNPQSFQKHIKRRENGQHAVSASQTLSVCCYAAGAAFSFIEALLHKGNDKPRQWLALDYTSADTPLSELEQTSKSIDSSAHMITTARVPADKPVRIAFSLSDSPDDASSENFPLAFPELDQQLQPLPPCHDSKESMQVYKQHCKIAEEYHEVKKEIALLEERKKELIARLEQVEKESMDAAQLAKEYAELTEENRTLKLAQTQCVEQLEKLRIQYQKRQGSS
SIO_010081: MAP3K7CL
subclass of: SO_0000673
so part of: MAP3K7CL
location: join(2976935..2977046,2978455..2978603,2981415..2981523,2990264..2990322,2999877..2999992,3008331..3008511)
location: region:2976935-3008511:1
so has part: feature:2976935-2977046:1:exon
so has part: feature:2978455-2978603:1:exon
so has part: feature:2981415-2981523:1:exon
so has part: feature:2990264-2990322:1:exon
so has part: feature:2999877-2999992:1:exon
so has part: feature:3008331-3008511:1:exon

XP_049690690.1
type: Protein
SIO_000068: ncbiprotein

position:3008511:1
position: 3008511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2976935-2977046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2978455-2978603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2981415-2981523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2990264-2990322:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2999877-2999992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3008331-3008511:1:exon

LOC126053231
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: LOC126053231
note: uncharacterized LOC126053231; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3024072..3035826)
location: region:3024072-3035826:-1
so has part: feature:3024072-3035826:-1:exon
subclass of: SO_0000011

126053231
type: Gene
SIO_000068: ncbigene

position:3024072:-1
position: 3024072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3035826:-1
position: 3035826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024072-3035826:-1:exon

LOC126053231
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8957
nc RNA class: lncRNA
gene: LOC126053231
product: uncharacterized LOC126053231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007510311.1
SIO_010081: LOC126053231
subclass of: SO_0000673
so part of: LOC126053231
location: complement(join(3024072..3026867,3026951..3027029,3035745..3035826))
location: region:3024072-3035826:-1
so has part: feature:3035745-3035826:-1:exon
so has part: feature:3026951-3027029:-1:exon
so has part: feature:3024072-3026867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3035745-3035826:-1:exon

position:3035745:-1
position: 3035745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3026951-3027029:-1:exon

position:3026951:-1
position: 3026951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027029:-1
position: 3027029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3024072-3026867:-1:exon

position:3026867:-1
position: 3026867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BACH1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: BACH1
note: BTB domain and CNC homolog 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3036546..3067333
location: region:3036546-3067333:1
so has part: feature:3036546-3067333:1:exon
subclass of: SO_0000010

126053219
type: Gene
SIO_000068: ncbigene

position:3036546:1
position: 3036546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067333:1
position: 3067333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036546-3067333:1:exon

BACH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: BACH1
product: BTB domain and CNC homolog 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835128.1
SIO_010081: BACH1
subclass of: SO_0000673
so part of: BACH1
location: join(3036546..3036652,3049594..3049891,3053667..3055061,3056749..3056955,3064049..3067333)
location: region:3036546-3067333:1
so has part: feature:3036546-3036652:1:exon
so has part: feature:3049594-3049891:1:exon
so has part: feature:3053667-3055061:1:exon
so has part: feature:3056749-3056955:1:exon
so has part: feature:3064049-3067333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3036546-3036652:1:exon

position:3036652:1
position: 3036652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3049594-3049891:1:exon

position:3049594:1
position: 3049594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3049891:1
position: 3049891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3053667-3055061:1:exon

position:3053667:1
position: 3053667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3055061:1
position: 3055061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3056749-3056955:1:exon

position:3056749:1
position: 3056749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3056955:1
position: 3056955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3064049-3067333:1:exon

position:3064049:1
position: 3064049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BACH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: BACH1
product: BTB domain and CNC homolog 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_049835129.1
SIO_010081: BACH1
subclass of: SO_0000673
so part of: BACH1
location: join(3036546..3036652,3049594..3049891,3053667..3055061,3056749..3056955,3057881..3058090,3064049..3064129)
location: region:3036546-3064129:1
so has part: feature:3036546-3036652:1:exon
so has part: feature:3049594-3049891:1:exon
so has part: feature:3053667-3055061:1:exon
so has part: feature:3056749-3056955:1:exon
so has part: feature:3057881-3058090:1:exon
so has part: feature:3064049-3064129:1:exon

position:3064129:1
position: 3064129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036546-3036652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049594-3049891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3053667-3055061:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3056749-3056955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3057881-3058090:1:exon

position:3057881:1
position: 3057881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3058090:1
position: 3058090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3064049-3064129:1:exon

BACH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: BACH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription regulator protein BACH1 isoform X1
translation: MSLSEKNSVVFAYESSVHSTNVLLSLDDQRKQDILCDVTILVEDQRFRAHKAVLAACSSYFLSRIVGQVDADLIITLPEEVTLKGFSPLLQFAYTAKLILNKDNVSEVCKCAEFLGVHNIEESCFQFLKFKFLDFKLDQQECPRKKYCTQRCQKTNPKIGNVDDGDLEVDDEAEELLEKEHIQTPDTRVCKDEENAKSSPALQDNANQTCDPIHLERSSVSSLSSQCPKYRKFQKAFGNDKVHTSESNSSIKDIRVPPVAVAFLEKEVSDNDGIQKAQECVPMQLVSKCEETQVKMEEGEEGIEKKEESKRDSVTQNVSCPVEKMDLAAFPQNSAAPHGLNSVSFLHTCEQYGNLNFSSMPNNAVLAEKTVSGTGVGNDKMESQDDTPSKVDLCTREATNITSAGDRSSVEREVAEHLAKGFWSDIYSTEACQIHLPPAVPKECLEPVYSGKKSECPWLGIRISESPEPCSQRTFTTLSSVNCPFISNLSTEGCSNSSEISSGDYVQGQQQEQCPYNYVISLGEDSETDTEGDSESCSAREQECEVKLPFNAQRIISLSRNDFQSFLKMHKLTPEQLDCIHDIRRRSKNRIAAQRCRKRKLDCIQNLESEIEKLQNEKENLLKERNHILSTLGETKQNLTGLCQQVCKEAALSHEQIQILAKYSSSDCPLSFLFPERERTAPSELAIPACIKLADGLSGVTSTSEQSSCYQCVKSVCDATYDQVQELHPVSVRTLEKTSLVEQCGQSGGITDFCQQMTDKCTTDE
SIO_010081: BACH1
subclass of: SO_0000673
so part of: BACH1
location: join(3049652..3049891,3053667..3055061,3056749..3056955,3064049..3064504)
location: region:3049652-3064504:1
so has part: feature:3049652-3049891:1:exon
so has part: feature:3053667-3055061:1:exon
so has part: feature:3056749-3056955:1:exon
so has part: feature:3064049-3064504:1:exon

XP_049691085.1
type: Protein
SIO_000068: ncbiprotein

position:3049652:1
position: 3049652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3064504:1
position: 3064504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049652-3049891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053667-3055061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3056749-3056955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3064049-3064504:1:exon

BACH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: BACH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription regulator protein BACH1 isoform X2
translation: MSLSEKNSVVFAYESSVHSTNVLLSLDDQRKQDILCDVTILVEDQRFRAHKAVLAACSSYFLSRIVGQVDADLIITLPEEVTLKGFSPLLQFAYTAKLILNKDNVSEVCKCAEFLGVHNIEESCFQFLKFKFLDFKLDQQECPRKKYCTQRCQKTNPKIGNVDDGDLEVDDEAEELLEKEHIQTPDTRVCKDEENAKSSPALQDNANQTCDPIHLERSSVSSLSSQCPKYRKFQKAFGNDKVHTSESNSSIKDIRVPPVAVAFLEKEVSDNDGIQKAQECVPMQLVSKCEETQVKMEEGEEGIEKKEESKRDSVTQNVSCPVEKMDLAAFPQNSAAPHGLNSVSFLHTCEQYGNLNFSSMPNNAVLAEKTVSGTGVGNDKMESQDDTPSKVDLCTREATNITSAGDRSSVEREVAEHLAKGFWSDIYSTEACQIHLPPAVPKECLEPVYSGKKSECPWLGIRISESPEPCSQRTFTTLSSVNCPFISNLSTEGCSNSSEISSGDYVQGQQQEQCPYNYVISLGEDSETDTEGDSESCSAREQECEVKLPFNAQRIISLSRNDFQSFLKMHKLTPEQLDCIHDIRRRSKNRIAAQRCRKRKLDCIQNLESEIEKLSEKENKIRAKCRRLDTYFPEVVHHLALCALLQQRRLIEGRSSVPYSPDELTEQVIQYAE
SIO_010081: BACH1
subclass of: SO_0000673
so part of: BACH1
location: join(3049652..3049891,3053667..3055061,3056749..3056955,3057881..3058060)
location: region:3049652-3058060:1
so has part: feature:3049652-3049891:1:exon
so has part: feature:3053667-3055061:1:exon
so has part: feature:3056749-3056955:1:exon
so has part: feature:3057881-3058060:1:exon

XP_049691086.1
type: Protein
SIO_000068: ncbiprotein

position:3058060:1
position: 3058060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049652-3049891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053667-3055061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3056749-3056955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3057881-3058060:1:exon

GRIK1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: GRIK1
note: glutamate ionotropic receptor kainate type subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3113088..3285864)
location: region:3113088-3285864:-1
so has part: feature:3113088-3285864:-1:exon
subclass of: SO_0000010

126053217
type: Gene
SIO_000068: ncbigene

position:3113088:-1
position: 3113088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3285864:-1
position: 3285864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113088-3285864:-1:exon

GRIK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: GRIK1
product: glutamate ionotropic receptor kainate type subunit 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835116.1
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3113088..3113577,3124102..3124352,3128745..3128970,3134135..3134352,3139120..3139238,3144505..3144728,3145367..3145570,3146752..3146865,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285864))
location: region:3113088-3285864:-1
so has part: feature:3285618-3285864:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3139120-3139238:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128745-3128970:-1:exon
so has part: feature:3124102-3124352:-1:exon
so has part: feature:3113088-3113577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285864:-1:exon

position:3285618:-1
position: 3285618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

position:3191716:-1
position: 3191716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191883:-1
position: 3191883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

position:3189057:-1
position: 3189057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3189314:-1
position: 3189314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

position:3181129:-1
position: 3181129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3181310:-1
position: 3181310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

position:3172133:-1
position: 3172133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3172186:-1
position: 3172186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

position:3170250:-1
position: 3170250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3170423:-1
position: 3170423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

position:3166036:-1
position: 3166036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3166179:-1
position: 3166179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

position:3150670:-1
position: 3150670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3150777:-1
position: 3150777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3146752-3146865:-1:exon

position:3146752:-1
position: 3146752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3146865:-1
position: 3146865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3145367-3145570:-1:exon

position:3145367:-1
position: 3145367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3145570:-1
position: 3145570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3144505-3144728:-1:exon

position:3144505:-1
position: 3144505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3144728:-1
position: 3144728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3139120-3139238:-1:exon

position:3139120:-1
position: 3139120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3139238:-1
position: 3139238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3134135-3134352:-1:exon

position:3134135:-1
position: 3134135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3134352:-1
position: 3134352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3128745-3128970:-1:exon

position:3128745:-1
position: 3128745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3128970:-1
position: 3128970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3124102-3124352:-1:exon

position:3124102:-1
position: 3124102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124352:-1
position: 3124352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3113088-3113577:-1:exon

position:3113577:-1
position: 3113577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRIK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: GRIK1
product: glutamate ionotropic receptor kainate type subunit 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835114.1
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3113088..3113577,3124102..3124352,3128745..3128970,3134135..3134352,3139120..3139238,3144505..3144728,3145367..3145570,3146752..3146865,3149869..3149913,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285864))
location: region:3113088-3285864:-1
so has part: feature:3285618-3285864:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3149869-3149913:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3139120-3139238:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128745-3128970:-1:exon
so has part: feature:3124102-3124352:-1:exon
so has part: feature:3113088-3113577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3149869-3149913:-1:exon

position:3149869:-1
position: 3149869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3149913:-1
position: 3149913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3139120-3139238:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3134135-3134352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3128745-3128970:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3124102-3124352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3113088-3113577:-1:exon

GRIK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: GRIK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 1 isoform X3
translation: MASALGPRWPLRPAPGGGGGGGGGLLFVLLCASAGLPRSGQQVLRIGGIFETVENEPVNIEELAFKFAVTNINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPTVDNKDAFYINLYPDYAAISRAVLDLVLYYNWKIVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDARPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALDLEPYRYSGVNMTGFRLLNVENPQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAALMYDAVYMVAVASQRASQMTVSSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGVWNSYSGLNMTDSNKDRSTNITDSLANRTLIVTTILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNSDIEQCLSFNAIMEELGISLKHQKKLKKRSRTKGKSSFTSILTCHQRRTLRKETIA
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3113422..3113577,3124102..3124352,3128745..3128970,3134135..3134352,3139120..3139238,3144505..3144728,3145367..3145570,3146752..3146865,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285756))
location: region:3113422-3285756:-1
so has part: feature:3285618-3285756:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3139120-3139238:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128745-3128970:-1:exon
so has part: feature:3124102-3124352:-1:exon
so has part: feature:3113422-3113577:-1:exon

XP_049691073.1
type: Protein
SIO_000068: ncbiprotein

position:3113422:-1
position: 3113422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3285756:-1
position: 3285756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3139120-3139238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3134135-3134352:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3128745-3128970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3124102-3124352:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3113422-3113577:-1:exon

GRIK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: GRIK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 1 isoform X1
translation: MASALGPRWPLRPAPGGGGGGGGGLLFVLLCASAGLPRSGQQVLRIGGIFETVENEPVNIEELAFKFAVTNINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPTVDNKDAFYINLYPDYAAISRAVLDLVLYYNWKIVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDARPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALDLEPYRYSGVNMTGFRLLNVENPQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAALMYDAVYMVAVASQRASQMTVSSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSNHLYKVWKKIGVWNSYSGLNMTDSNKDRSTNITDSLANRTLIVTTILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNSDIEQCLSFNAIMEELGISLKHQKKLKKRSRTKGKSSFTSILTCHQRRTLRKETIA
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3113422..3113577,3124102..3124352,3128745..3128970,3134135..3134352,3139120..3139238,3144505..3144728,3145367..3145570,3146752..3146865,3149869..3149913,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285756))
location: region:3113422-3285756:-1
so has part: feature:3285618-3285756:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3149869-3149913:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3139120-3139238:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128745-3128970:-1:exon
so has part: feature:3124102-3124352:-1:exon
so has part: feature:3113422-3113577:-1:exon

XP_049691071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3149869-3149913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3139120-3139238:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3134135-3134352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3128745-3128970:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3124102-3124352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3113422-3113577:-1:exon

GRIK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: GRIK1
product: glutamate ionotropic receptor kainate type subunit 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92 Proteins
transcript id: XM_049835118.1
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3113466..3113577,3121543..3121708,3124102..3124352,3128745..3128970,3134135..3134352,3139120..3139238,3144505..3144728,3145367..3145570,3146752..3146865,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285864))
location: region:3113466-3285864:-1
so has part: feature:3285618-3285864:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3139120-3139238:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128745-3128970:-1:exon
so has part: feature:3124102-3124352:-1:exon
so has part: feature:3121543-3121708:-1:exon
so has part: feature:3113466-3113577:-1:exon

position:3113466:-1
position: 3113466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3139120-3139238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3134135-3134352:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3128745-3128970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3124102-3124352:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3121543-3121708:-1:exon

position:3121543:-1
position: 3121543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3121708:-1
position: 3121708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3113466-3113577:-1:exon

GRIK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: GRIK1
product: glutamate ionotropic receptor kainate type subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86 Proteins
transcript id: XM_049835115.1
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3113466..3113577,3121543..3121708,3124102..3124352,3128745..3128970,3134135..3134352,3139120..3139238,3144505..3144728,3145367..3145570,3146752..3146865,3149869..3149913,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285864))
location: region:3113466-3285864:-1
so has part: feature:3285618-3285864:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3149869-3149913:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3139120-3139238:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128745-3128970:-1:exon
so has part: feature:3124102-3124352:-1:exon
so has part: feature:3121543-3121708:-1:exon
so has part: feature:3113466-3113577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3149869-3149913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3139120-3139238:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3134135-3134352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3128745-3128970:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3124102-3124352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3121543-3121708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3113466-3113577:-1:exon

GRIK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: GRIK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 1 isoform X4
translation: MASALGPRWPLRPAPGGGGGGGGGLLFVLLCASAGLPRSGQQVLRIGGIFETVENEPVNIEELAFKFAVTNINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPTVDNKDAFYINLYPDYAAISRAVLDLVLYYNWKIVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDARPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALDLEPYRYSGVNMTGFRLLNVENPQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAALMYDAVYMVAVASQRASQMTVSSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGVWNSYSGLNMTDSNKDRSTNITDSLANRTLIVTTILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNSDIEQAFCFFYGLQCKQTHPSNSTSGTTLSTELDCGKLIREERGIRTQPSIHTV
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3121559..3121708,3124102..3124352,3128745..3128970,3134135..3134352,3139120..3139238,3144505..3144728,3145367..3145570,3146752..3146865,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285756))
location: region:3121559-3285756:-1
so has part: feature:3285618-3285756:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3139120-3139238:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128745-3128970:-1:exon
so has part: feature:3124102-3124352:-1:exon
so has part: feature:3121559-3121708:-1:exon

XP_049691075.1
type: Protein
SIO_000068: ncbiprotein

position:3121559:-1
position: 3121559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3139120-3139238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3134135-3134352:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3128745-3128970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3124102-3124352:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3121559-3121708:-1:exon

GRIK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: GRIK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 1 isoform X2
translation: MASALGPRWPLRPAPGGGGGGGGGLLFVLLCASAGLPRSGQQVLRIGGIFETVENEPVNIEELAFKFAVTNINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPTVDNKDAFYINLYPDYAAISRAVLDLVLYYNWKIVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDARPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALDLEPYRYSGVNMTGFRLLNVENPQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAALMYDAVYMVAVASQRASQMTVSSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSNHLYKVWKKIGVWNSYSGLNMTDSNKDRSTNITDSLANRTLIVTTILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVKNNDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNSDIEQAFCFFYGLQCKQTHPSNSTSGTTLSTELDCGKLIREERGIRTQPSIHTV
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3121559..3121708,3124102..3124352,3128745..3128970,3134135..3134352,3139120..3139238,3144505..3144728,3145367..3145570,3146752..3146865,3149869..3149913,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285756))
location: region:3121559-3285756:-1
so has part: feature:3285618-3285756:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3149869-3149913:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3139120-3139238:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128745-3128970:-1:exon
so has part: feature:3124102-3124352:-1:exon
so has part: feature:3121559-3121708:-1:exon

XP_049691072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3149869-3149913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3139120-3139238:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3134135-3134352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3128745-3128970:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3124102-3124352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3121559-3121708:-1:exon

GRIK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: GRIK1
product: glutamate ionotropic receptor kainate type subunit 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_049835119.1
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3128857..3128970,3134135..3134352,3144505..3144728,3145367..3145570,3146752..3146865,3149869..3149913,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285864))
location: region:3128857-3285864:-1
so has part: feature:3285618-3285864:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3149869-3149913:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3134135-3134352:-1:exon
so has part: feature:3128857-3128970:-1:exon

position:3128857:-1
position: 3128857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3149869-3149913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3134135-3134352:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3128857-3128970:-1:exon

GRIK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: GRIK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 1 isoform X5
translation: MASALGPRWPLRPAPGGGGGGGGGLLFVLLCASAGLPRSGQQVLRIGGIFETVENEPVNIEELAFKFAVTNINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPTVDNKDAFYINLYPDYAAISRAVLDLVLYYNWKIVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDARPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALDLEPYRYSGVNMTGFRLLNVENPQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAALMYDAVYMVAVASQRASQMTVSSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKAAGEVSNHLYKVWKKIGVWNSYSGLNMTDSNKDRSTNITDSLANRTLIVTTILEDPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARIRADAQSSFYQNSWRNMVVFHLNHNLILYCQPGCLPDCGEDGIPHRFSRRFGKANQDRVWGC
SIO_010081: GRIK1
subclass of: SO_0000673
so part of: GRIK1
location: complement(join(3134163..3134352,3144505..3144728,3145367..3145570,3146752..3146865,3149869..3149913,3150670..3150777,3166036..3166179,3170250..3170423,3172133..3172186,3181129..3181310,3189057..3189314,3191716..3191883,3285618..3285756))
location: region:3134163-3285756:-1
so has part: feature:3285618-3285756:-1:exon
so has part: feature:3191716-3191883:-1:exon
so has part: feature:3189057-3189314:-1:exon
so has part: feature:3181129-3181310:-1:exon
so has part: feature:3172133-3172186:-1:exon
so has part: feature:3170250-3170423:-1:exon
so has part: feature:3166036-3166179:-1:exon
so has part: feature:3150670-3150777:-1:exon
so has part: feature:3149869-3149913:-1:exon
so has part: feature:3146752-3146865:-1:exon
so has part: feature:3145367-3145570:-1:exon
so has part: feature:3144505-3144728:-1:exon
so has part: feature:3134163-3134352:-1:exon

XP_049691076.1
type: Protein
SIO_000068: ncbiprotein

position:3134163:-1
position: 3134163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3285618-3285756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191716-3191883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189057-3189314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3181129-3181310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172133-3172186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3170250-3170423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166036-3166179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150670-3150777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3149869-3149913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3146752-3146865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3145367-3145570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3144505-3144728:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3134163-3134352:-1:exon

LOC126053226
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: LOC126053226
note: claudin-8-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3360256..3361251)
location: region:3360256-3361251:-1
so has part: feature:3360256-3361251:-1:exon
subclass of: SO_0000010

126053226
type: Gene
SIO_000068: ncbigene

position:3360256:-1
position: 3360256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3361251:-1
position: 3361251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3360256-3361251:-1:exon

LOC126053226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: LOC126053226
product: claudin-8-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
transcript id: XM_049835144.1
SIO_010081: LOC126053226
subclass of: SO_0000673
so part of: LOC126053226
location: complement(join(3360256..3360369,3360665..3361251))
location: region:3360256-3361251:-1
so has part: feature:3360665-3361251:-1:exon
so has part: feature:3360256-3360369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3360665-3361251:-1:exon

position:3360665:-1
position: 3360665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3360256-3360369:-1:exon

position:3360369:-1
position: 3360369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC126053226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: LOC126053226
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: claudin-8-like
translation: MACCVLQITGLIFGGVGMVGTLAATVMPQWRVSAYIDGNIVVFETIWEGLWMDCISQLGIRLQCKFYDSILALPPPLEVFRALMCIAVVLSIISFLMAIVGVKYTHRTEEDAQGISIFILAAGVAFLLTGILVLIPVSWTGGSIIHDFYDPKVPVPLKRELGAALYVGWVSTALLITAGAMYCSFWCWADTSSKSRNEEWYRNTSSQESLREDEQHMVGXGRQLLCNSTIALP
SIO_010081: LOC126053226
subclass of: SO_0000673
so part of: LOC126053226
location: complement(join(3360256..3360369,3360665..3361251))
location: region:3360256-3361251:-1
so has part: feature:3360665-3361251:-1:exon
so has part: feature:3360256-3360369:-1:exon

XP_049691101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3360665-3361251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3360256-3360369:-1:exon

LOC126053227
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: LOC126053227
note: claudin-8-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3379748..3380690)
location: region:3379748-3380690:-1
so has part: feature:3379748-3380690:-1:exon
subclass of: SO_0000010

126053227
type: Gene
SIO_000068: ncbigene

position:3379748:-1
position: 3379748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380690:-1
position: 3380690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3379748-3380690:-1:exon

LOC126053227
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: LOC126053227
product: claudin-8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
transcript id: XM_049835145.1
SIO_010081: LOC126053227
subclass of: SO_0000673
so part of: LOC126053227
location: complement(3379748..3380690)
location: region:3379748-3380690:-1
so has part: feature:3379748-3380690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3379748-3380690:-1:exon

LOC126053227
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: LOC126053227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-8-like
translation: MVGGALQIAGLLVGGIGMIGTFAVTGMPQWRVSAFIENNIIVFETIWEGLWMHCIRQANIRMQCKVYDSVLALSPDLQASRGLMCAGSVLSFLAFMVAIIGMKCMQCAQSSWQAKGYIILVAGLLFILSGAVELIPVCWVASTIIRDFYNPMVNVAQKRELGEALYLGWVSAFCLIAAGAIFCCFCRCCEKTRSYGYSTPTHYPTHSQHLYRKTESSYSKSQYV
SIO_010081: LOC126053227
subclass of: SO_0000673
so part of: LOC126053227
location: complement(3380000..3380674)
location: region:3380000-3380674:-1
so has part: feature:3380000-3380674:-1:exon

XP_049691102.1
type: Protein
SIO_000068: ncbiprotein

position:3380000:-1
position: 3380000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380674:-1
position: 3380674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3380000-3380674:-1:exon

TIAM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: TIAM1
note: TIAM Rac1 associated GEF 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3438540..3632369)
location: region:3438540-3632369:-1
so has part: feature:3438540-3632369:-1:exon
subclass of: SO_0000010

126053215
type: Gene
SIO_000068: ncbigene

position:3438540:-1
position: 3438540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3632369:-1
position: 3632369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3438540-3632369:-1:exon

TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835108.1
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3438540..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455317,3463493..3463596,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522807,3557507..3557557))
location: region:3438540-3557557:-1
so has part: feature:3557507-3557557:-1:exon
so has part: feature:3521828-3522807:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463596:-1:exon
so has part: feature:3455213-3455317:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3438540-3441500:-1:exon

position:3557557:-1
position: 3557557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3557507-3557557:-1:exon

position:3557507:-1
position: 3557507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3521828-3522807:-1:exon

position:3521828:-1
position: 3521828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3522807:-1
position: 3522807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3506275-3506722:-1:exon

position:3506275:-1
position: 3506275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3506722:-1
position: 3506722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3503704-3503876:-1:exon

position:3503704:-1
position: 3503704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3503876:-1
position: 3503876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3499940-3500164:-1:exon

position:3499940:-1
position: 3499940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3500164:-1
position: 3500164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3498294-3498479:-1:exon

position:3498294:-1
position: 3498294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3498479:-1
position: 3498479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3495705-3495851:-1:exon

position:3495705:-1
position: 3495705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3495851:-1
position: 3495851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3493542-3493616:-1:exon

position:3493542:-1
position: 3493542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3493616:-1
position: 3493616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3492327-3492497:-1:exon

position:3492327:-1
position: 3492327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3492497:-1
position: 3492497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3486617-3486721:-1:exon

position:3486617:-1
position: 3486617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3486721:-1
position: 3486721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3482723-3482804:-1:exon

position:3482723:-1
position: 3482723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3482804:-1
position: 3482804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3477449-3477535:-1:exon

position:3477449:-1
position: 3477449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3477535:-1
position: 3477535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3473661-3473885:-1:exon

position:3473661:-1
position: 3473661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473885:-1
position: 3473885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3463493-3463596:-1:exon

position:3463493:-1
position: 3463493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3463596:-1
position: 3463596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3455213-3455317:-1:exon

position:3455213:-1
position: 3455213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3455317:-1
position: 3455317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3454704-3454772:-1:exon

position:3454704:-1
position: 3454704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3454772:-1
position: 3454772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3454279-3454404:-1:exon

position:3454279:-1
position: 3454279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3454404:-1
position: 3454404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3452480-3452588:-1:exon

position:3452480:-1
position: 3452480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452588:-1
position: 3452588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3450159-3450338:-1:exon

position:3450159:-1
position: 3450159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450338:-1
position: 3450338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3449913-3450031:-1:exon

position:3449913:-1
position: 3449913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450031:-1
position: 3450031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3448023-3448131:-1:exon

position:3448023:-1
position: 3448023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3448131:-1
position: 3448131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3446410-3446468:-1:exon

position:3446410:-1
position: 3446410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3446468:-1
position: 3446468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3445340-3445442:-1:exon

position:3445340:-1
position: 3445340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3445442:-1
position: 3445442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3444513-3444600:-1:exon

position:3444513:-1
position: 3444513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444600:-1
position: 3444600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3443472-3443644:-1:exon

position:3443472:-1
position: 3443472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3443644:-1
position: 3443644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3438540-3441500:-1:exon

position:3441500:-1
position: 3441500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835102.1
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3438541..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3463493..3463599,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522807,3573504..3573563,3594480..3594820,3632234..3632369))
location: region:3438541-3632369:-1
so has part: feature:3632234-3632369:-1:exon
so has part: feature:3594480-3594820:-1:exon
so has part: feature:3573504-3573563:-1:exon
so has part: feature:3521828-3522807:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
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TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835101.1
SIO_010081: TIAM1
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TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_049835103.1
SIO_010081: TIAM1
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TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_049835104.1
SIO_010081: TIAM1
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TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_049835100.1
SIO_010081: TIAM1
subclass of: SO_0000673
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TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_049835106.1
SIO_010081: TIAM1
subclass of: SO_0000673
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TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835099.1
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
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TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_049835105.1
SIO_010081: TIAM1
subclass of: SO_0000673
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position:3528257:-1
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TIAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: TIAM1
product: TIAM Rac1 associated GEF 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835109.1
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
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position:3438554:-1
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type: ReverseStrandPosition
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position:3460832:-1
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TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X5
translation: MFVLLMMSDCDAMGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455317,3463493..3463596,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522807,3557507..3557531))
location: region:3441016-3557531:-1
so has part: feature:3557507-3557531:-1:exon
so has part: feature:3521828-3522807:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463596:-1:exon
so has part: feature:3455213-3455317:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691065.1
type: Protein
SIO_000068: ncbiprotein

position:3441016:-1
position: 3441016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3557531:-1
position: 3557531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3557507-3557531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3521828-3522807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3463493-3463596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3455213-3455317:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X2
translation: MFVLLMMSDCDAMGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3463493..3463596,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522807,3557507..3557531))
location: region:3441016-3557531:-1
so has part: feature:3557507-3557531:-1:exon
so has part: feature:3521828-3522807:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463596:-1:exon
so has part: feature:3455213-3455392:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3557507-3557531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3521828-3522807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3463493-3463596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3455213-3455392:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X4
translation: MFVLLMMSDCDAMGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQAGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455317,3463493..3463599,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522807,3557507..3557531))
location: region:3441016-3557531:-1
so has part: feature:3557507-3557531:-1:exon
so has part: feature:3521828-3522807:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463599:-1:exon
so has part: feature:3455213-3455317:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3557507-3557531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3521828-3522807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3463493-3463599:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3455213-3455317:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X1
translation: MFVLLMMSDCDAMGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQAGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3463493..3463599,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522807,3557507..3557531))
location: region:3441016-3557531:-1
so has part: feature:3557507-3557531:-1:exon
so has part: feature:3521828-3522807:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463599:-1:exon
so has part: feature:3455213-3455392:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3557507-3557531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3521828-3522807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3463493-3463599:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3455213-3455392:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X3
translation: MGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQAGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3463493..3463599,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522796))
location: region:3441016-3522796:-1
so has part: feature:3521828-3522796:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463599:-1:exon
so has part: feature:3455213-3455392:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691058.1
type: Protein
SIO_000068: ncbiprotein

position:3522796:-1
position: 3522796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3521828-3522796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3463493-3463599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3455213-3455392:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X3
translation: MGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQAGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3463493..3463599,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522796))
location: region:3441016-3522796:-1
so has part: feature:3521828-3522796:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463599:-1:exon
so has part: feature:3455213-3455392:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521828-3522796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3463493-3463599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3455213-3455392:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X3
translation: MGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQAGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3463493..3463599,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522796))
location: region:3441016-3522796:-1
so has part: feature:3521828-3522796:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463599:-1:exon
so has part: feature:3455213-3455392:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521828-3522796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3463493-3463599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3455213-3455392:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X3
translation: MGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQAGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3463493..3463599,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522796))
location: region:3441016-3522796:-1
so has part: feature:3521828-3522796:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463599:-1:exon
so has part: feature:3455213-3455392:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521828-3522796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3463493-3463599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3455213-3455392:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X3
translation: MGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSSSTPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVLTAASVQSMPDSEESRLYGDEPPFLAEGDGRSHRYTANGTNFMETASFKKKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDTETTRVTEASGSPQPLVACQRSNSMSDLYSPKTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKLASVTAEDAPSYNNYNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYSPTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESAARRKWKHYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEMICKTHQLDHSAHYVRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNSVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQSPPRRLENPSDLSDSTLAFAGSNQAGHSLCGDPDSSVETAPEEAEVQDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3463493..3463599,3473661..3473885,3477449..3477535,3482723..3482804,3486617..3486721,3492327..3492497,3493542..3493616,3495705..3495851,3498294..3498479,3499940..3500164,3503704..3503876,3506275..3506722,3521828..3522796))
location: region:3441016-3522796:-1
so has part: feature:3521828-3522796:-1:exon
so has part: feature:3506275-3506722:-1:exon
so has part: feature:3503704-3503876:-1:exon
so has part: feature:3499940-3500164:-1:exon
so has part: feature:3498294-3498479:-1:exon
so has part: feature:3495705-3495851:-1:exon
so has part: feature:3493542-3493616:-1:exon
so has part: feature:3492327-3492497:-1:exon
so has part: feature:3486617-3486721:-1:exon
so has part: feature:3482723-3482804:-1:exon
so has part: feature:3477449-3477535:-1:exon
so has part: feature:3473661-3473885:-1:exon
so has part: feature:3463493-3463599:-1:exon
so has part: feature:3455213-3455392:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521828-3522796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3506275-3506722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3503704-3503876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499940-3500164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498294-3498479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495705-3495851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3493542-3493616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492327-3492497:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3486617-3486721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3482723-3482804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3477449-3477535:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3473661-3473885:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3463493-3463599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3455213-3455392:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3441016-3441500:-1:exon

TIAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: TIAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor TIAM1 isoform X6
translation: MSDSSGNTAFPAMSALWRVNRKLKNENAGRAGDSLYRMLYLSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVYTSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCWGDRPRPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
SIO_010081: TIAM1
subclass of: SO_0000673
so part of: TIAM1
location: complement(join(3441016..3441500,3443472..3443644,3444513..3444600,3445340..3445442,3446410..3446468,3448023..3448131,3449913..3450031,3450159..3450338,3452480..3452588,3454279..3454404,3454704..3454772,3455213..3455392,3458837..3458959))
location: region:3441016-3458959:-1
so has part: feature:3458837-3458959:-1:exon
so has part: feature:3455213-3455392:-1:exon
so has part: feature:3454704-3454772:-1:exon
so has part: feature:3454279-3454404:-1:exon
so has part: feature:3452480-3452588:-1:exon
so has part: feature:3450159-3450338:-1:exon
so has part: feature:3449913-3450031:-1:exon
so has part: feature:3448023-3448131:-1:exon
so has part: feature:3446410-3446468:-1:exon
so has part: feature:3445340-3445442:-1:exon
so has part: feature:3444513-3444600:-1:exon
so has part: feature:3443472-3443644:-1:exon
so has part: feature:3441016-3441500:-1:exon

XP_049691066.1
type: Protein
SIO_000068: ncbiprotein

position:3458959:-1
position: 3458959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3458837-3458959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3455213-3455392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3454704-3454772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3454279-3454404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3452480-3452588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3450159-3450338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3449913-3450031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3448023-3448131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3446410-3446468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3445340-3445442:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3444513-3444600:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3443472-3443644:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3441016-3441500:-1:exon

SOD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: SOD1
note: superoxide dismutase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3661567..3667078
location: region:3661567-3667078:1
so has part: feature:3661567-3667078:1:exon
subclass of: SO_0000010

126053229
type: Gene
SIO_000068: ncbigene

position:3661567:1
position: 3661567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3667078:1
position: 3667078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3661567-3667078:1:exon

SOD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SOD1
product: superoxide dismutase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835147.1
SIO_010081: SOD1
subclass of: SO_0000673
so part of: SOD1
location: join(3661567..3661706,3662571..3662664,3663151..3663220,3665448..3665562,3666488..3667078)
location: region:3661567-3667078:1
so has part: feature:3661567-3661706:1:exon
so has part: feature:3662571-3662664:1:exon
so has part: feature:3663151-3663220:1:exon
so has part: feature:3665448-3665562:1:exon
so has part: feature:3666488-3667078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3661567-3661706:1:exon

position:3661706:1
position: 3661706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3662571-3662664:1:exon

position:3662571:1
position: 3662571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3662664:1
position: 3662664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3663151-3663220:1:exon

position:3663151:1
position: 3663151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3663220:1
position: 3663220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3665448-3665562:1:exon

position:3665448:1
position: 3665448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3665562:1
position: 3665562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3666488-3667078:1:exon

position:3666488:1
position: 3666488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: superoxide dismutase [Cu-Zn]
translation: MATLKAVCVMKGDGPVQGVIQFQQQGNGPVKVTGRISGLTDGDHGFHVHEFGDNTNGCTSAGSHFNPEGKQHGGPKDAERHVGDLGNVNAKGGVAEVEIEDPIISLSGPHSIIGRTMVVHEKRDDLGRGGDNESKLTGNAGPRLACGVIGIAKS
SIO_010081: SOD1
subclass of: SO_0000673
so part of: SOD1
location: join(3661632..3661706,3662571..3662664,3663151..3663220,3665448..3665562,3666488..3666598)
location: region:3661632-3666598:1
so has part: feature:3661632-3661706:1:exon
so has part: feature:3662571-3662664:1:exon
so has part: feature:3663151-3663220:1:exon
so has part: feature:3665448-3665562:1:exon
so has part: feature:3666488-3666598:1:exon

XP_049691104.1
type: Protein
SIO_000068: ncbiprotein

position:3661632:1
position: 3661632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3666598:1
position: 3666598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3661632-3661706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3662571-3662664:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3663151-3663220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3665448-3665562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3666488-3666598:1:exon

SCAF4
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: SCAF4
note: SR-related CTD associated factor 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3668443..3716530)
location: region:3668443-3716530:-1
so has part: feature:3668443-3716530:-1:exon
subclass of: SO_0000010

126053216
type: Gene
SIO_000068: ncbigene

position:3668443:-1
position: 3668443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3716530:-1
position: 3716530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3668443-3716530:-1:exon

SCAF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SCAF4
product: SR-related CTD associated factor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_049835111.1
SIO_010081: SCAF4
subclass of: SO_0000673
so part of: SCAF4
location: complement(join(3668443..3671332,3679752..3679940,3680045..3680125,3680259..3680421,3686400..3686554,3688061..3688217,3688935..3689048,3690104..3690204,3691135..3691325,3692750..3692835,3694219..3694386,3694729..3694837,3695993..3696040,3696548..3696645,3697015..3697191,3697742..3697881,3700358..3700493,3702796..3702957,3703867..3703911,3704522..3704605,3716234..3716530))
location: region:3668443-3716530:-1
so has part: feature:3716234-3716530:-1:exon
so has part: feature:3704522-3704605:-1:exon
so has part: feature:3703867-3703911:-1:exon
so has part: feature:3702796-3702957:-1:exon
so has part: feature:3700358-3700493:-1:exon
so has part: feature:3697742-3697881:-1:exon
so has part: feature:3697015-3697191:-1:exon
so has part: feature:3696548-3696645:-1:exon
so has part: feature:3695993-3696040:-1:exon
so has part: feature:3694729-3694837:-1:exon
so has part: feature:3694219-3694386:-1:exon
so has part: feature:3692750-3692835:-1:exon
so has part: feature:3691135-3691325:-1:exon
so has part: feature:3690104-3690204:-1:exon
so has part: feature:3688935-3689048:-1:exon
so has part: feature:3688061-3688217:-1:exon
so has part: feature:3686400-3686554:-1:exon
so has part: feature:3680259-3680421:-1:exon
so has part: feature:3680045-3680125:-1:exon
so has part: feature:3679752-3679940:-1:exon
so has part: feature:3668443-3671332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3716234-3716530:-1:exon

position:3716234:-1
position: 3716234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3704522-3704605:-1:exon

position:3704522:-1
position: 3704522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3704605:-1
position: 3704605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3703867-3703911:-1:exon

position:3703867:-1
position: 3703867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3703911:-1
position: 3703911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3702796-3702957:-1:exon

position:3702796:-1
position: 3702796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3702957:-1
position: 3702957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3700358-3700493:-1:exon

position:3700358:-1
position: 3700358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3700493:-1
position: 3700493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3697742-3697881:-1:exon

position:3697742:-1
position: 3697742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3697881:-1
position: 3697881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3697015-3697191:-1:exon

position:3697015:-1
position: 3697015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3697191:-1
position: 3697191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3696548-3696645:-1:exon

position:3696548:-1
position: 3696548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3696645:-1
position: 3696645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3695993-3696040:-1:exon

position:3695993:-1
position: 3695993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3696040:-1
position: 3696040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3694729-3694837:-1:exon

position:3694729:-1
position: 3694729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694837:-1
position: 3694837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3694219-3694386:-1:exon

position:3694219:-1
position: 3694219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694386:-1
position: 3694386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3692750-3692835:-1:exon

position:3692750:-1
position: 3692750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3692835:-1
position: 3692835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3691135-3691325:-1:exon

position:3691135:-1
position: 3691135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3691325:-1
position: 3691325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3690104-3690204:-1:exon

position:3690104:-1
position: 3690104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690204:-1
position: 3690204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3688935-3689048:-1:exon

position:3688935:-1
position: 3688935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3689048:-1
position: 3689048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3688061-3688217:-1:exon

position:3688061:-1
position: 3688061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3688217:-1
position: 3688217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3686400-3686554:-1:exon

position:3686400:-1
position: 3686400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3686554:-1
position: 3686554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3680259-3680421:-1:exon

position:3680259:-1
position: 3680259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3680421:-1
position: 3680421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3680045-3680125:-1:exon

position:3680045:-1
position: 3680045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3680125:-1
position: 3680125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3679752-3679940:-1:exon

position:3679752:-1
position: 3679752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3679940:-1
position: 3679940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3668443-3671332:-1:exon

position:3671332:-1
position: 3671332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SCAF4
product: SR-related CTD associated factor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_049835112.1
SIO_010081: SCAF4
subclass of: SO_0000673
so part of: SCAF4
location: complement(join(3668443..3671332,3679752..3679940,3680045..3680125,3680259..3680421,3686400..3686554,3688061..3688217,3688935..3689048,3690104..3690204,3691135..3691325,3692750..3692835,3694219..3694386,3694729..3694837,3696548..3696648,3697015..3697191,3697742..3697881,3700358..3700493,3702796..3702957,3703867..3703911,3704522..3704605,3716234..3716530))
location: region:3668443-3716530:-1
so has part: feature:3716234-3716530:-1:exon
so has part: feature:3704522-3704605:-1:exon
so has part: feature:3703867-3703911:-1:exon
so has part: feature:3702796-3702957:-1:exon
so has part: feature:3700358-3700493:-1:exon
so has part: feature:3697742-3697881:-1:exon
so has part: feature:3697015-3697191:-1:exon
so has part: feature:3696548-3696648:-1:exon
so has part: feature:3694729-3694837:-1:exon
so has part: feature:3694219-3694386:-1:exon
so has part: feature:3692750-3692835:-1:exon
so has part: feature:3691135-3691325:-1:exon
so has part: feature:3690104-3690204:-1:exon
so has part: feature:3688935-3689048:-1:exon
so has part: feature:3688061-3688217:-1:exon
so has part: feature:3686400-3686554:-1:exon
so has part: feature:3680259-3680421:-1:exon
so has part: feature:3680045-3680125:-1:exon
so has part: feature:3679752-3679940:-1:exon
so has part: feature:3668443-3671332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3716234-3716530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3704522-3704605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703867-3703911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702796-3702957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700358-3700493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3697742-3697881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3697015-3697191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696548-3696648:-1:exon

position:3696648:-1
position: 3696648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3694729-3694837:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3694219-3694386:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3692750-3692835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3691135-3691325:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3690104-3690204:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3688935-3689048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3688061-3688217:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3686400-3686554:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3680259-3680421:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3680045-3680125:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3679752-3679940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3668443-3671332:-1:exon

SCAF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SCAF4
product: SR-related CTD associated factor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_049835110.1
SIO_010081: SCAF4
subclass of: SO_0000673
so part of: SCAF4
location: complement(join(3668443..3671332,3679752..3679940,3680045..3680125,3680259..3680421,3686400..3686554,3688061..3688217,3688935..3689048,3690104..3690204,3691135..3691325,3692750..3692835,3694219..3694386,3694729..3694837,3695993..3696040,3696548..3696648,3697015..3697191,3697742..3697881,3700358..3700493,3702796..3702957,3703867..3703911,3704522..3704605,3716234..3716530))
location: region:3668443-3716530:-1
so has part: feature:3716234-3716530:-1:exon
so has part: feature:3704522-3704605:-1:exon
so has part: feature:3703867-3703911:-1:exon
so has part: feature:3702796-3702957:-1:exon
so has part: feature:3700358-3700493:-1:exon
so has part: feature:3697742-3697881:-1:exon
so has part: feature:3697015-3697191:-1:exon
so has part: feature:3696548-3696648:-1:exon
so has part: feature:3695993-3696040:-1:exon
so has part: feature:3694729-3694837:-1:exon
so has part: feature:3694219-3694386:-1:exon
so has part: feature:3692750-3692835:-1:exon
so has part: feature:3691135-3691325:-1:exon
so has part: feature:3690104-3690204:-1:exon
so has part: feature:3688935-3689048:-1:exon
so has part: feature:3688061-3688217:-1:exon
so has part: feature:3686400-3686554:-1:exon
so has part: feature:3680259-3680421:-1:exon
so has part: feature:3680045-3680125:-1:exon
so has part: feature:3679752-3679940:-1:exon
so has part: feature:3668443-3671332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3716234-3716530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3704522-3704605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703867-3703911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702796-3702957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700358-3700493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3697742-3697881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3697015-3697191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696548-3696648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3695993-3696040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3694729-3694837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3694219-3694386:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3692750-3692835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3691135-3691325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3690104-3690204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3688935-3689048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3688061-3688217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3686400-3686554:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3680259-3680421:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3680045-3680125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3679752-3679940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3668443-3671332:-1:exon

SCAF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SCAF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SR-related and CTD-associated factor 4 isoform X2
translation: MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSATAPMTENATNNEGSPPPPVKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKTAFPPPEQKTSFDKLLDRFDYDDEPEAVEDAKKEDSAPSPSVSQPALTSLSFSAQAGWCSIPGGFPGEGIQQPVFPQLPNMDPFQQRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPPTAPVQQTFQSPFPVQSESHMQKTHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVPPPVAPTNVPAPVTQAIPLLGTQGVAPPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGMPPPPLQRFPLMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGGPGGPEDNRDGRQFRNDRQTFTPNRDQERFGRRSFGNRVENDRERYGNRNDDRDHERLGNRDRRDWGRRSPDRDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKSEMTDRADGDKNHESHSGKMEDADIVSELAAGESESTGVKPVEELTSEATSSVEQAEKDMGSVAEAPR
SIO_010081: SCAF4
subclass of: SO_0000673
so part of: SCAF4
location: complement(join(3670491..3671332,3679752..3679940,3680045..3680125,3680259..3680421,3686400..3686554,3688061..3688217,3688935..3689048,3690104..3690204,3691135..3691325,3692750..3692835,3694219..3694386,3694729..3694837,3695993..3696040,3696548..3696645,3697015..3697191,3697742..3697881,3700358..3700493,3702796..3702957,3703867..3703911,3704522..3704605,3716234..3716263))
location: region:3670491-3716263:-1
so has part: feature:3716234-3716263:-1:exon
so has part: feature:3704522-3704605:-1:exon
so has part: feature:3703867-3703911:-1:exon
so has part: feature:3702796-3702957:-1:exon
so has part: feature:3700358-3700493:-1:exon
so has part: feature:3697742-3697881:-1:exon
so has part: feature:3697015-3697191:-1:exon
so has part: feature:3696548-3696645:-1:exon
so has part: feature:3695993-3696040:-1:exon
so has part: feature:3694729-3694837:-1:exon
so has part: feature:3694219-3694386:-1:exon
so has part: feature:3692750-3692835:-1:exon
so has part: feature:3691135-3691325:-1:exon
so has part: feature:3690104-3690204:-1:exon
so has part: feature:3688935-3689048:-1:exon
so has part: feature:3688061-3688217:-1:exon
so has part: feature:3686400-3686554:-1:exon
so has part: feature:3680259-3680421:-1:exon
so has part: feature:3680045-3680125:-1:exon
so has part: feature:3679752-3679940:-1:exon
so has part: feature:3670491-3671332:-1:exon

XP_049691068.1
type: Protein
SIO_000068: ncbiprotein

position:3670491:-1
position: 3670491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3716263:-1
position: 3716263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3716234-3716263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3704522-3704605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703867-3703911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702796-3702957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700358-3700493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3697742-3697881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3697015-3697191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696548-3696645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3695993-3696040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3694729-3694837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3694219-3694386:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3692750-3692835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3691135-3691325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3690104-3690204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3688935-3689048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3688061-3688217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3686400-3686554:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3680259-3680421:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3680045-3680125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3679752-3679940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3670491-3671332:-1:exon

SCAF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SCAF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SR-related and CTD-associated factor 4 isoform X3
translation: MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSATAPMTENATNNEGSPPPPVKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKTAFPPPEQKTSFDKKLLDRFDYDDEPEAVEDAKKEDSAPSPSVSQPAFGFPGEGIQQPVFPQLPNMDPFQQRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPPTAPVQQTFQSPFPVQSESHMQKTHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVPPPVAPTNVPAPVTQAIPLLGTQGVAPPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGMPPPPLQRFPLMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGGPGGPEDNRDGRQFRNDRQTFTPNRDQERFGRRSFGNRVENDRERYGNRNDDRDHERLGNRDRRDWGRRSPDRDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKSEMTDRADGDKNHESHSGKMEDADIVSELAAGESESTGVKPVEELTSEATSSVEQAEKDMGSVAEAPR
SIO_010081: SCAF4
subclass of: SO_0000673
so part of: SCAF4
location: complement(join(3670491..3671332,3679752..3679940,3680045..3680125,3680259..3680421,3686400..3686554,3688061..3688217,3688935..3689048,3690104..3690204,3691135..3691325,3692750..3692835,3694219..3694386,3694729..3694837,3696548..3696648,3697015..3697191,3697742..3697881,3700358..3700493,3702796..3702957,3703867..3703911,3704522..3704605,3716234..3716263))
location: region:3670491-3716263:-1
so has part: feature:3716234-3716263:-1:exon
so has part: feature:3704522-3704605:-1:exon
so has part: feature:3703867-3703911:-1:exon
so has part: feature:3702796-3702957:-1:exon
so has part: feature:3700358-3700493:-1:exon
so has part: feature:3697742-3697881:-1:exon
so has part: feature:3697015-3697191:-1:exon
so has part: feature:3696548-3696648:-1:exon
so has part: feature:3694729-3694837:-1:exon
so has part: feature:3694219-3694386:-1:exon
so has part: feature:3692750-3692835:-1:exon
so has part: feature:3691135-3691325:-1:exon
so has part: feature:3690104-3690204:-1:exon
so has part: feature:3688935-3689048:-1:exon
so has part: feature:3688061-3688217:-1:exon
so has part: feature:3686400-3686554:-1:exon
so has part: feature:3680259-3680421:-1:exon
so has part: feature:3680045-3680125:-1:exon
so has part: feature:3679752-3679940:-1:exon
so has part: feature:3670491-3671332:-1:exon

XP_049691069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3716234-3716263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3704522-3704605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703867-3703911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702796-3702957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700358-3700493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3697742-3697881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3697015-3697191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696548-3696648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3694729-3694837:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3694219-3694386:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3692750-3692835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3691135-3691325:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3690104-3690204:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3688935-3689048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3688061-3688217:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3686400-3686554:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3680259-3680421:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3680045-3680125:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3679752-3679940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3670491-3671332:-1:exon

SCAF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SCAF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SR-related and CTD-associated factor 4 isoform X1
translation: MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSATAPMTENATNNEGSPPPPVKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKTAFPPPEQKTSFDKKLLDRFDYDDEPEAVEDAKKEDSAPSPSVSQPALTSLSFSAQAGWCSIPGGFPGEGIQQPVFPQLPNMDPFQQRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPPTAPVQQTFQSPFPVQSESHMQKTHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVPPPVAPTNVPAPVTQAIPLLGTQGVAPPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGMPPPPLQRFPLMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGGPGGPEDNRDGRQFRNDRQTFTPNRDQERFGRRSFGNRVENDRERYGNRNDDRDHERLGNRDRRDWGRRSPDRDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKSEMTDRADGDKNHESHSGKMEDADIVSELAAGESESTGVKPVEELTSEATSSVEQAEKDMGSVAEAPR
SIO_010081: SCAF4
subclass of: SO_0000673
so part of: SCAF4
location: complement(join(3670491..3671332,3679752..3679940,3680045..3680125,3680259..3680421,3686400..3686554,3688061..3688217,3688935..3689048,3690104..3690204,3691135..3691325,3692750..3692835,3694219..3694386,3694729..3694837,3695993..3696040,3696548..3696648,3697015..3697191,3697742..3697881,3700358..3700493,3702796..3702957,3703867..3703911,3704522..3704605,3716234..3716263))
location: region:3670491-3716263:-1
so has part: feature:3716234-3716263:-1:exon
so has part: feature:3704522-3704605:-1:exon
so has part: feature:3703867-3703911:-1:exon
so has part: feature:3702796-3702957:-1:exon
so has part: feature:3700358-3700493:-1:exon
so has part: feature:3697742-3697881:-1:exon
so has part: feature:3697015-3697191:-1:exon
so has part: feature:3696548-3696648:-1:exon
so has part: feature:3695993-3696040:-1:exon
so has part: feature:3694729-3694837:-1:exon
so has part: feature:3694219-3694386:-1:exon
so has part: feature:3692750-3692835:-1:exon
so has part: feature:3691135-3691325:-1:exon
so has part: feature:3690104-3690204:-1:exon
so has part: feature:3688935-3689048:-1:exon
so has part: feature:3688061-3688217:-1:exon
so has part: feature:3686400-3686554:-1:exon
so has part: feature:3680259-3680421:-1:exon
so has part: feature:3680045-3680125:-1:exon
so has part: feature:3679752-3679940:-1:exon
so has part: feature:3670491-3671332:-1:exon

XP_049691067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3716234-3716263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3704522-3704605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703867-3703911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702796-3702957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700358-3700493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3697742-3697881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3697015-3697191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696548-3696648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3695993-3696040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3694729-3694837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3694219-3694386:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3692750-3692835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3691135-3691325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3690104-3690204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3688935-3689048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3688061-3688217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3686400-3686554:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3680259-3680421:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3680045-3680125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3679752-3679940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3670491-3671332:-1:exon

SCAF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SCAF4
product: SR-related CTD associated factor 4, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835113.1
SIO_010081: SCAF4
subclass of: SO_0000673
so part of: SCAF4
location: complement(join(3676300..3677739,3679752..3679940,3680045..3680125,3680259..3680421,3686400..3686554,3688061..3688217,3688935..3689048,3690104..3690204,3691135..3691325,3692750..3692835,3694219..3694386,3694729..3694837,3695993..3696040,3696548..3696648,3697015..3697191,3697742..3697881,3700358..3700493,3702796..3702957,3703867..3703911,3704522..3704605,3716234..3716530))
location: region:3676300-3716530:-1
so has part: feature:3716234-3716530:-1:exon
so has part: feature:3704522-3704605:-1:exon
so has part: feature:3703867-3703911:-1:exon
so has part: feature:3702796-3702957:-1:exon
so has part: feature:3700358-3700493:-1:exon
so has part: feature:3697742-3697881:-1:exon
so has part: feature:3697015-3697191:-1:exon
so has part: feature:3696548-3696648:-1:exon
so has part: feature:3695993-3696040:-1:exon
so has part: feature:3694729-3694837:-1:exon
so has part: feature:3694219-3694386:-1:exon
so has part: feature:3692750-3692835:-1:exon
so has part: feature:3691135-3691325:-1:exon
so has part: feature:3690104-3690204:-1:exon
so has part: feature:3688935-3689048:-1:exon
so has part: feature:3688061-3688217:-1:exon
so has part: feature:3686400-3686554:-1:exon
so has part: feature:3680259-3680421:-1:exon
so has part: feature:3680045-3680125:-1:exon
so has part: feature:3679752-3679940:-1:exon
so has part: feature:3676300-3677739:-1:exon

position:3676300:-1
position: 3676300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3716234-3716530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3704522-3704605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703867-3703911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702796-3702957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700358-3700493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3697742-3697881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3697015-3697191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696548-3696648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3695993-3696040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3694729-3694837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3694219-3694386:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3692750-3692835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3691135-3691325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3690104-3690204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3688935-3689048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3688061-3688217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3686400-3686554:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3680259-3680421:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3680045-3680125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3679752-3679940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3676300-3677739:-1:exon

position:3677739:-1
position: 3677739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SCAF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SR-related and CTD-associated factor 4 isoform X4
translation: MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSATAPMTENATNNEGSPPPPVKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKTAFPPPEQKTSFDKKLLDRFDYDDEPEAVEDAKKEDSAPSPSVSQPALTSLSFSAQAGWCSIPGGFPGEGIQQPVFPQLPNMDPFQQRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPPTAPVQQTFQSPFPVQSESHMQKTHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVPPPVAPTNVPAPVTQAIPLLGWKKNMKEVLFSTTPADLDSKEVSLEVLPSPSYEFKRWPGCIVIPSFSFCVSGFTPREIKECEMECARVSPCVRT
SIO_010081: SCAF4
subclass of: SO_0000673
so part of: SCAF4
location: complement(join(3677513..3677739,3679752..3679940,3680045..3680125,3680259..3680421,3686400..3686554,3688061..3688217,3688935..3689048,3690104..3690204,3691135..3691325,3692750..3692835,3694219..3694386,3694729..3694837,3695993..3696040,3696548..3696648,3697015..3697191,3697742..3697881,3700358..3700493,3702796..3702957,3703867..3703911,3704522..3704605,3716234..3716263))
location: region:3677513-3716263:-1
so has part: feature:3716234-3716263:-1:exon
so has part: feature:3704522-3704605:-1:exon
so has part: feature:3703867-3703911:-1:exon
so has part: feature:3702796-3702957:-1:exon
so has part: feature:3700358-3700493:-1:exon
so has part: feature:3697742-3697881:-1:exon
so has part: feature:3697015-3697191:-1:exon
so has part: feature:3696548-3696648:-1:exon
so has part: feature:3695993-3696040:-1:exon
so has part: feature:3694729-3694837:-1:exon
so has part: feature:3694219-3694386:-1:exon
so has part: feature:3692750-3692835:-1:exon
so has part: feature:3691135-3691325:-1:exon
so has part: feature:3690104-3690204:-1:exon
so has part: feature:3688935-3689048:-1:exon
so has part: feature:3688061-3688217:-1:exon
so has part: feature:3686400-3686554:-1:exon
so has part: feature:3680259-3680421:-1:exon
so has part: feature:3680045-3680125:-1:exon
so has part: feature:3679752-3679940:-1:exon
so has part: feature:3677513-3677739:-1:exon

XP_049691070.1
type: Protein
SIO_000068: ncbiprotein

position:3677513:-1
position: 3677513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3716234-3716263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3704522-3704605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3703867-3703911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702796-3702957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700358-3700493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3697742-3697881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3697015-3697191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696548-3696648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3695993-3696040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3694729-3694837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3694219-3694386:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3692750-3692835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3691135-3691325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3690104-3690204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3688935-3689048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3688061-3688217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3686400-3686554:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3680259-3680421:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3680045-3680125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3679752-3679940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3677513-3677739:-1:exon

HUNK
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: HUNK
note: hormonally up-regulated Neu-associated kinase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3743111..3802282
location: region:3743111-3802282:1
so has part: feature:3743111-3802282:1:exon
subclass of: SO_0000010

126053220
type: Gene
SIO_000068: ncbigene

position:3743111:1
position: 3743111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3802282:1
position: 3802282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3743111-3802282:1:exon

HUNK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: HUNK
product: hormonally up-regulated Neu-associated kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_049835130.1
SIO_010081: HUNK
subclass of: SO_0000673
so part of: HUNK
location: join(3743111..3743380,3762836..3763128,3772105..3772160,3777674..3777809,3779651..3779778,3785328..3785463,3790015..3790183,3791295..3791378,3796630..3796810,3799167..3802282)
location: region:3743111-3802282:1
so has part: feature:3743111-3743380:1:exon
so has part: feature:3762836-3763128:1:exon
so has part: feature:3772105-3772160:1:exon
so has part: feature:3777674-3777809:1:exon
so has part: feature:3779651-3779778:1:exon
so has part: feature:3785328-3785463:1:exon
so has part: feature:3790015-3790183:1:exon
so has part: feature:3791295-3791378:1:exon
so has part: feature:3796630-3796810:1:exon
so has part: feature:3799167-3802282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3743111-3743380:1:exon

position:3743380:1
position: 3743380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3762836-3763128:1:exon

position:3762836:1
position: 3762836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3763128:1
position: 3763128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3772105-3772160:1:exon

position:3772105:1
position: 3772105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772160:1
position: 3772160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3777674-3777809:1:exon

position:3777674:1
position: 3777674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777809:1
position: 3777809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3779651-3779778:1:exon

position:3779651:1
position: 3779651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3779778:1
position: 3779778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3785328-3785463:1:exon

position:3785328:1
position: 3785328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3785463:1
position: 3785463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3790015-3790183:1:exon

position:3790015:1
position: 3790015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3790183:1
position: 3790183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3791295-3791378:1:exon

position:3791295:1
position: 3791295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3791378:1
position: 3791378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3796630-3796810:1:exon

position:3796630:1
position: 3796630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3796810:1
position: 3796810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3799167-3802282:1:exon

position:3799167:1
position: 3799167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HUNK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: HUNK
product: hormonally up-regulated Neu-associated kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_049835131.1
SIO_010081: HUNK
subclass of: SO_0000673
so part of: HUNK
location: join(3743111..3743380,3762836..3763128,3772105..3772160,3777674..3777809,3779651..3779778,3785328..3785463,3790015..3790183,3791295..3791378,3796747..3796810,3799167..3802282)
location: region:3743111-3802282:1
so has part: feature:3743111-3743380:1:exon
so has part: feature:3762836-3763128:1:exon
so has part: feature:3772105-3772160:1:exon
so has part: feature:3777674-3777809:1:exon
so has part: feature:3779651-3779778:1:exon
so has part: feature:3785328-3785463:1:exon
so has part: feature:3790015-3790183:1:exon
so has part: feature:3791295-3791378:1:exon
so has part: feature:3796747-3796810:1:exon
so has part: feature:3799167-3802282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3743111-3743380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3762836-3763128:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772105-3772160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3777674-3777809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3779651-3779778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3785328-3785463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3790015-3790183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3791295-3791378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3796747-3796810:1:exon

position:3796747:1
position: 3796747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3799167-3802282:1:exon

HUNK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: HUNK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hormonally up-regulated neu tumor-associated kinase isoform X1
translation: MPAAAGDGLLSEPPAVAGSGGGGGEARKAAAGAEGSFLAAWLSAAAAAPRERLRDFQHTKRVGNYLIGRKLGEGSFAKVREGLHVLTGEKVAVKVIDKKRAKKDTYVTKNLRREGQIQQMIRHPNIAQLLDILETENSYYLVMELCPGGNLMHKIYEKKRLEEHEARKYIRQLILAVEHLHRAGVVHRDLKIENLLLDEDNNIKLIDFGLSNCAGILGYSDPFSTQCGSPAYAAPELLARKKYGPKIDVWSIGVNMYAMLTGTLPFTVEPFSLRALYQKMVDKEMNPFPTQLSTAAINFLRSLLEPDPAKRPNIQQALANRWLNENYPGRAPPNVTYPNRIHLEDLSQSVLLHMTEKLGYKNSDVINTVLSNRASHTLAIYFLLNKKLERYLASLRKSEGQDNICHKNQLYQIEKYKANKDSYEDKKLKEQEKKGEILHRQLPKKTEKSPVSYRQPSSCLISQIQNTKALLKDRKVTKTAGPEKDSSSAVSPFHEPLATKTGCVTSSSLEYLEVQQPPPRTPRLLKRQESPQQEPARIGGRAKDSPLILNIVHSFESVDREDQIDQVSPSHQYRILGSPMNFPYKSSSERTLSPLFQPGSTSPIHPTQVSFTYEEKAYPAKEESVSPTQLVSNNPLGSPNCVKSRGRFPMMGIGQMLRKRNQTMQSASDKPLEARMPQLQQMSPTQISFNAADAVSGQC
SIO_010081: HUNK
subclass of: SO_0000673
so part of: HUNK
location: join(3743111..3743380,3762836..3763128,3772105..3772160,3777674..3777809,3779651..3779778,3785328..3785463,3790015..3790183,3791295..3791378,3796630..3796810,3799167..3799813)
location: region:3743111-3799813:1
so has part: feature:3743111-3743380:1:exon
so has part: feature:3762836-3763128:1:exon
so has part: feature:3772105-3772160:1:exon
so has part: feature:3777674-3777809:1:exon
so has part: feature:3779651-3779778:1:exon
so has part: feature:3785328-3785463:1:exon
so has part: feature:3790015-3790183:1:exon
so has part: feature:3791295-3791378:1:exon
so has part: feature:3796630-3796810:1:exon
so has part: feature:3799167-3799813:1:exon

XP_049691087.1
type: Protein
SIO_000068: ncbiprotein

position:3799813:1
position: 3799813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3743111-3743380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3762836-3763128:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772105-3772160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3777674-3777809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3779651-3779778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3785328-3785463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3790015-3790183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3791295-3791378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3796630-3796810:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3799167-3799813:1:exon

HUNK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: HUNK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hormonally up-regulated neu tumor-associated kinase isoform X2
translation: MPAAAGDGLLSEPPAVAGSGGGGGEARKAAAGAEGSFLAAWLSAAAAAPRERLRDFQHTKRVGNYLIGRKLGEGSFAKVREGLHVLTGEKVAVKVIDKKRAKKDTYVTKNLRREGQIQQMIRHPNIAQLLDILETENSYYLVMELCPGGNLMHKIYEKKRLEEHEARKYIRQLILAVEHLHRAGVVHRDLKIENLLLDEDNNIKLIDFGLSNCAGILGYSDPFSTQCGSPAYAAPELLARKKYGPKIDVWSIGVNMYAMLTGTLPFTVEPFSLRALYQKMVDKEMNPFPTQLSTAAINFLRSLLEPDPAKRPNIQQALANRWLNENYPGRAPPNVTYPNRIHLEDLSQSVLLHMTEKLGYKNSDVINTVLSNRASHTLAIYFLLNKKLERYLASLRKSEGQDNICHKNQLYQIEKYKANKDSYEIQNTKALLKDRKVTKTAGPEKDSSSAVSPFHEPLATKTGCVTSSSLEYLEVQQPPPRTPRLLKRQESPQQEPARIGGRAKDSPLILNIVHSFESVDREDQIDQVSPSHQYRILGSPMNFPYKSSSERTLSPLFQPGSTSPIHPTQVSFTYEEKAYPAKEESVSPTQLVSNNPLGSPNCVKSRGRFPMMGIGQMLRKRNQTMQSASDKPLEARMPQLQQMSPTQISFNAADAVSGQC
SIO_010081: HUNK
subclass of: SO_0000673
so part of: HUNK
location: join(3743111..3743380,3762836..3763128,3772105..3772160,3777674..3777809,3779651..3779778,3785328..3785463,3790015..3790183,3791295..3791378,3796747..3796810,3799167..3799813)
location: region:3743111-3799813:1
so has part: feature:3743111-3743380:1:exon
so has part: feature:3762836-3763128:1:exon
so has part: feature:3772105-3772160:1:exon
so has part: feature:3777674-3777809:1:exon
so has part: feature:3779651-3779778:1:exon
so has part: feature:3785328-3785463:1:exon
so has part: feature:3790015-3790183:1:exon
so has part: feature:3791295-3791378:1:exon
so has part: feature:3796747-3796810:1:exon
so has part: feature:3799167-3799813:1:exon

XP_049691088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3743111-3743380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3762836-3763128:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772105-3772160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3777674-3777809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3779651-3779778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3785328-3785463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3790015-3790183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3791295-3791378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3796747-3796810:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3799167-3799813:1:exon

MIS18A
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: MIS18A
note: MIS18 kinetochore protein A; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3893942..3897024)
location: region:3893942-3897024:-1
so has part: feature:3893942-3897024:-1:exon
subclass of: SO_0000010

126053228
type: Gene
SIO_000068: ncbigene

position:3893942:-1
position: 3893942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3897024:-1
position: 3897024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3893942-3897024:-1:exon

MIS18A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: MIS18A
product: MIS18 kinetochore protein A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835146.1
SIO_010081: MIS18A
subclass of: SO_0000673
so part of: MIS18A
location: complement(join(3893942..3894250,3894939..3895032,3896014..3896136,3896559..3896625,3896751..3897024))
location: region:3893942-3897024:-1
so has part: feature:3896751-3897024:-1:exon
so has part: feature:3896559-3896625:-1:exon
so has part: feature:3896014-3896136:-1:exon
so has part: feature:3894939-3895032:-1:exon
so has part: feature:3893942-3894250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3896751-3897024:-1:exon

position:3896751:-1
position: 3896751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3896559-3896625:-1:exon

position:3896559:-1
position: 3896559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3896625:-1
position: 3896625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3896014-3896136:-1:exon

position:3896014:-1
position: 3896014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3896136:-1
position: 3896136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3894939-3895032:-1:exon

position:3894939:-1
position: 3894939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895032:-1
position: 3895032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3893942-3894250:-1:exon

position:3894250:-1
position: 3894250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIS18A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: MIS18A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mis18-alpha
translation: MAGALHLPSGLVAELDSSLSRLDAGGRRVPPLPPAEQRQGAAENADLLPMVFLCAGCKRPVGDTLSWVTNDEESGCILLRSAAASVSVDEERKVSKLPGECGCIVETLFCSGCSMTLGNIYRCTPKHLDYKRDLFCFNVDSIESYILGSSEKQALTDEEPLTLESRAVLEDVLQRADTVLKVLETRLTAVESSMASLHNEV
SIO_010081: MIS18A
subclass of: SO_0000673
so part of: MIS18A
location: complement(join(3894170..3894250,3894939..3895032,3896014..3896136,3896559..3896625,3896751..3896991))
location: region:3894170-3896991:-1
so has part: feature:3896751-3896991:-1:exon
so has part: feature:3896559-3896625:-1:exon
so has part: feature:3896014-3896136:-1:exon
so has part: feature:3894939-3895032:-1:exon
so has part: feature:3894170-3894250:-1:exon

XP_049691103.1
type: Protein
SIO_000068: ncbiprotein

position:3894170:-1
position: 3894170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3896991:-1
position: 3896991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3896751-3896991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3896559-3896625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3896014-3896136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3894939-3895032:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3894170-3894250:-1:exon

LOC126053230
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: LOC126053230
note: uncharacterized LOC126053230; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3897232..3917012
location: region:3897232-3917012:1
so has part: feature:3897232-3917012:1:exon
subclass of: SO_0000011

126053230
type: Gene
SIO_000068: ncbigene

position:3897232:1
position: 3897232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3917012:1
position: 3917012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3897232-3917012:1:exon

LOC126053230
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8957
nc RNA class: lncRNA
gene: LOC126053230
product: uncharacterized LOC126053230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007510310.1
SIO_010081: LOC126053230
subclass of: SO_0000673
so part of: LOC126053230
location: join(3897232..3898274,3903531..3903630,3912600..3917012)
location: region:3897232-3917012:1
so has part: feature:3897232-3898274:1:exon
so has part: feature:3903531-3903630:1:exon
so has part: feature:3912600-3917012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3897232-3898274:1:exon

position:3898274:1
position: 3898274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3903531-3903630:1:exon

position:3903531:1
position: 3903531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3903630:1
position: 3903630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3912600-3917012:1:exon

position:3912600:1
position: 3912600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

URB1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: URB1
note: URB1 ribosome biogenesis homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3918131..3975308)
location: region:3918131-3975308:-1
so has part: feature:3918131-3975308:-1:exon
subclass of: SO_0000010

126053213
type: Gene
SIO_000068: ncbigene

position:3918131:-1
position: 3918131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3975308:-1
position: 3975308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3918131-3975308:-1:exon

URB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: URB1
product: URB1 ribosome biogenesis homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835085.1
SIO_010081: URB1
subclass of: SO_0000673
so part of: URB1
location: complement(join(3918131..3918938,3920158..3920760,3922437..3922678,3923609..3923785,3924972..3925081,3925847..3925990,3926514..3926620,3927598..3927709,3928089..3928249,3932687..3932789,3933350..3933521,3935289..3935352,3935444..3935554,3937255..3937448,3938205..3938263,3939469..3939646,3939836..3940037,3941254..3942109,3943119..3943298,3943841..3944065,3944622..3944818,3946056..3946226,3947308..3947446,3948115..3948231,3952204..3952323,3953518..3953630,3955770..3955892,3958418..3958568,3959206..3959379,3959773..3959910,3961201..3961396,3962555..3962685,3964417..3964542,3966507..3966592,3968056..3968152,3970611..3970743,3972783..3972934,3974289..3974428,3974801..3975308))
location: region:3918131-3975308:-1
so has part: feature:3974801-3975308:-1:exon
so has part: feature:3974289-3974428:-1:exon
so has part: feature:3972783-3972934:-1:exon
so has part: feature:3970611-3970743:-1:exon
so has part: feature:3968056-3968152:-1:exon
so has part: feature:3966507-3966592:-1:exon
so has part: feature:3964417-3964542:-1:exon
so has part: feature:3962555-3962685:-1:exon
so has part: feature:3961201-3961396:-1:exon
so has part: feature:3959773-3959910:-1:exon
so has part: feature:3959206-3959379:-1:exon
so has part: feature:3958418-3958568:-1:exon
so has part: feature:3955770-3955892:-1:exon
so has part: feature:3953518-3953630:-1:exon
so has part: feature:3952204-3952323:-1:exon
so has part: feature:3948115-3948231:-1:exon
so has part: feature:3947308-3947446:-1:exon
so has part: feature:3946056-3946226:-1:exon
so has part: feature:3944622-3944818:-1:exon
so has part: feature:3943841-3944065:-1:exon
so has part: feature:3943119-3943298:-1:exon
so has part: feature:3941254-3942109:-1:exon
so has part: feature:3939836-3940037:-1:exon
so has part: feature:3939469-3939646:-1:exon
so has part: feature:3938205-3938263:-1:exon
so has part: feature:3937255-3937448:-1:exon
so has part: feature:3935444-3935554:-1:exon
so has part: feature:3935289-3935352:-1:exon
so has part: feature:3933350-3933521:-1:exon
so has part: feature:3932687-3932789:-1:exon
so has part: feature:3928089-3928249:-1:exon
so has part: feature:3927598-3927709:-1:exon
so has part: feature:3926514-3926620:-1:exon
so has part: feature:3925847-3925990:-1:exon
so has part: feature:3924972-3925081:-1:exon
so has part: feature:3923609-3923785:-1:exon
so has part: feature:3922437-3922678:-1:exon
so has part: feature:3920158-3920760:-1:exon
so has part: feature:3918131-3918938:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3974801-3975308:-1:exon

position:3974801:-1
position: 3974801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3974289-3974428:-1:exon

position:3974289:-1
position: 3974289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3974428:-1
position: 3974428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3972783-3972934:-1:exon

position:3972783:-1
position: 3972783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3972934:-1
position: 3972934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3970611-3970743:-1:exon

position:3970611:-1
position: 3970611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3970743:-1
position: 3970743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3968056-3968152:-1:exon

position:3968056:-1
position: 3968056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3968152:-1
position: 3968152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3966507-3966592:-1:exon

position:3966507:-1
position: 3966507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3966592:-1
position: 3966592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3964417-3964542:-1:exon

position:3964417:-1
position: 3964417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3964542:-1
position: 3964542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3962555-3962685:-1:exon

position:3962555:-1
position: 3962555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3962685:-1
position: 3962685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3961201-3961396:-1:exon

position:3961201:-1
position: 3961201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3961396:-1
position: 3961396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3959773-3959910:-1:exon

position:3959773:-1
position: 3959773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3959910:-1
position: 3959910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3959206-3959379:-1:exon

position:3959206:-1
position: 3959206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3959379:-1
position: 3959379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3958418-3958568:-1:exon

position:3958418:-1
position: 3958418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3958568:-1
position: 3958568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3955770-3955892:-1:exon

position:3955770:-1
position: 3955770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3955892:-1
position: 3955892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3953518-3953630:-1:exon

position:3953518:-1
position: 3953518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3953630:-1
position: 3953630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3952204-3952323:-1:exon

position:3952204:-1
position: 3952204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3952323:-1
position: 3952323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3948115-3948231:-1:exon

position:3948115:-1
position: 3948115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3948231:-1
position: 3948231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3947308-3947446:-1:exon

position:3947308:-1
position: 3947308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3947446:-1
position: 3947446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3946056-3946226:-1:exon

position:3946056:-1
position: 3946056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3946226:-1
position: 3946226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3944622-3944818:-1:exon

position:3944622:-1
position: 3944622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3944818:-1
position: 3944818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3943841-3944065:-1:exon

position:3943841:-1
position: 3943841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3944065:-1
position: 3944065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3943119-3943298:-1:exon

position:3943119:-1
position: 3943119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3943298:-1
position: 3943298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3941254-3942109:-1:exon

position:3941254:-1
position: 3941254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3942109:-1
position: 3942109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3939836-3940037:-1:exon

position:3939836:-1
position: 3939836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3940037:-1
position: 3940037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3939469-3939646:-1:exon

position:3939469:-1
position: 3939469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3939646:-1
position: 3939646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3938205-3938263:-1:exon

position:3938205:-1
position: 3938205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3938263:-1
position: 3938263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3937255-3937448:-1:exon

position:3937255:-1
position: 3937255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3937448:-1
position: 3937448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3935444-3935554:-1:exon

position:3935444:-1
position: 3935444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3935554:-1
position: 3935554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3935289-3935352:-1:exon

position:3935289:-1
position: 3935289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3935352:-1
position: 3935352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3933350-3933521:-1:exon

position:3933350:-1
position: 3933350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3933521:-1
position: 3933521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3932687-3932789:-1:exon

position:3932687:-1
position: 3932687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3932789:-1
position: 3932789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3928089-3928249:-1:exon

position:3928089:-1
position: 3928089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3928249:-1
position: 3928249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3927598-3927709:-1:exon

position:3927598:-1
position: 3927598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927709:-1
position: 3927709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3926514-3926620:-1:exon

position:3926514:-1
position: 3926514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3926620:-1
position: 3926620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3925847-3925990:-1:exon

position:3925847:-1
position: 3925847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925990:-1
position: 3925990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3924972-3925081:-1:exon

position:3924972:-1
position: 3924972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925081:-1
position: 3925081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3923609-3923785:-1:exon

position:3923609:-1
position: 3923609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3923785:-1
position: 3923785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3922437-3922678:-1:exon

position:3922437:-1
position: 3922437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3922678:-1
position: 3922678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3920158-3920760:-1:exon

position:3920158:-1
position: 3920158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920760:-1
position: 3920760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:3918131-3918938:-1:exon

position:3918938:-1
position: 3918938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

URB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: URB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar pre-ribosomal-associated protein 1
translation: MLQPGLGSSGREGRGPAAAGRQLSLGARVQLTPPRAARTTAPPPAADSGAAAGGRGEAVAAAAAAAASCRGAAPPLRALPGRPSRGGGSAMAVKRRGVPAAGPPAAKRACGEEEEFNGARFKALLRDPATAGKGLETFVSIAETLPSPEVYDVVEGYVKISMECAEIFKLLDGERKPESEMLLIFQALEAILLRTASDLSHFSVVGMNIVKKLIHSYMRLVYAALYSENHRMSRVCLTLLSAMVAQGPDSARDVYSHFDFNNKFLPGLLKKRCKKGRPDVRMAYIQFALSFLIAGDNAILTRVLELKDFIPDILRSEIKEDKVSTVNLLLSTLRTKVVQNKNITKTQKVRFFTAEVLIHIASLYRWNGITDVSPGDLKVSQGSEEVGKMVVRELVHNFLMDLCCSLKHGITFYDPSLGTSGKGGNVVLLRFLLGLKTATEDEMVADLMVNILKVCPDLLNRYFKETRYSFVPRLKSAWMDNMKLLKKIYEAQPEISNSFKTSEFIPLPRLLSMVMVTTVPAVCNKIMFTQGLNLPSTVVKHSILSLVSMVLRRALKNIEYCLNEEIWQKSEIYTPSVMQEFVQLYREAISKLLPDMNNIVAVWQSLLKQGREHHDGQEEKRESAISTVKAVTETPEVAEQHDSDDAETLFLKAALLQVICLYQKVVPHLVARSNFDFSKLLKGIVTEKGLREEVPPVLQHHILKVALELPANKFAWFRVQDVSESEKVSGEKSVFYLLMKMFVTSNHSHLKISTKKLIIKVLRDSGVFEYTWKELSVWLEHLDNTKEDKKEAVIQFLERILLKLVTNPYPYTDKAADLVQEASVLQVNVFKQDSDNISIPISHIDDVLDMVDVLIEGSDGLDEEIGFTLNEDMIIQTFPFSAVVPAALEARNILLLQTENGTGAHIIEYLVAVFTDLLHSQREPLALCLMFQLYDKELQSLKVSKYPQLYQFNQYYKLWIPQQSQELVFKKCKEVCKEPATALESVFTILLRKAYERGSNTLLEDDIQTKLRDLASQLPPEQLLLGVKHVLLYLKSTVESFGSLSKTFGPHLVDLYVDLLNSLLCRGNQVELDNQQKREDHQTESDLFMDEQSLITEESSNDKTLEDTLLLIFRHPTLESWFLALEQRSLPQHSLNPITVKLLSACLNSGVLQLLKTGAPMLQSMDHKHVLSKYFEAITKSVLKELEAVGKDRSQVSPKKSHQLEALEELHIYMTAAQLKEITLTMLRLPEMSLTTQKSEKCPRKGKQLSFYGQILVQLLTESYQRQPQRGELLLSTEHIKALGMLMSASASKDLEKVFLQALQSEPVLAHAVSVEVHVHCLNQRSETSLAIVGMLIKHCRTHLLQFELWCLSSASGKYLRKNMESFLPLINVYLQCRDQYDFTRPSTVVSAVTPVLRKALWKELCGVFQDTEALHETTMKLQVLSKLLPSSESKGLRNLIDQLPAALEKAENNESWTVADAISRMLENSEELHSWRRRLLSACLKGLVVMYNSSKDESKPEAERSMLLRLEELLCFVEEVDPDDWYSLVKTGLKYRYRDEAFLKVLNIAIQLLYKKESSLSQSLVKLSKLHMMVTQHSLFLSAILRSREEDCTNIQTREALVDILLTVVKLSPSLCESSHLAVLLGAYGATLSTVDQKILLLLQLYEKNNQSLINSRILLWGPAAVEHHKTCKSLGRSLWQQPSMEEILCLLDREKMMKTILSFPQHRRLLSSQELQESLYRDESVKSLDDFYDPRFLLQLFSELTRPECVVACHKFVEVNALGLTVAALSSYDSNMRAAAYFVLASFRSHLEGARFREKSQLLYLLDAVQNGIRQPNLRFTFSLTLYIARVAQQILKPEEHMYIKVNRFLLSHQYLDLRKVPGFFQLFYSFDFEYKTEREWILRFLGEGLRDKHCYELYDYQRIFQVILSFFNSPLCDEGSQSHILEILQNAANVTRAAYELIQDHSLLTWILHILEKRFLENKLLNKIISLLHTLWLTNLGDKREVKNQSQENRKFL…
SIO_010081: URB1
subclass of: SO_0000673
so part of: URB1
location: complement(join(3918733..3918938,3920158..3920760,3922437..3922678,3923609..3923785,3924972..3925081,3925847..3925990,3926514..3926620,3927598..3927709,3928089..3928249,3932687..3932789,3933350..3933521,3935289..3935352,3935444..3935554,3937255..3937448,3938205..3938263,3939469..3939646,3939836..3940037,3941254..3942109,3943119..3943298,3943841..3944065,3944622..3944818,3946056..3946226,3947308..3947446,3948115..3948231,3952204..3952323,3953518..3953630,3955770..3955892,3958418..3958568,3959206..3959379,3959773..3959910,3961201..3961396,3962555..3962685,3964417..3964542,3966507..3966592,3968056..3968152,3970611..3970743,3972783..3972934,3974289..3974428,3974801..3975200))
location: region:3918733-3975200:-1
so has part: feature:3974801-3975200:-1:exon
so has part: feature:3974289-3974428:-1:exon
so has part: feature:3972783-3972934:-1:exon
so has part: feature:3970611-3970743:-1:exon
so has part: feature:3968056-3968152:-1:exon
so has part: feature:3966507-3966592:-1:exon
so has part: feature:3964417-3964542:-1:exon
so has part: feature:3962555-3962685:-1:exon
so has part: feature:3961201-3961396:-1:exon
so has part: feature:3959773-3959910:-1:exon
so has part: feature:3959206-3959379:-1:exon
so has part: feature:3958418-3958568:-1:exon
so has part: feature:3955770-3955892:-1:exon
so has part: feature:3953518-3953630:-1:exon
so has part: feature:3952204-3952323:-1:exon
so has part: feature:3948115-3948231:-1:exon
so has part: feature:3947308-3947446:-1:exon
so has part: feature:3946056-3946226:-1:exon
so has part: feature:3944622-3944818:-1:exon
so has part: feature:3943841-3944065:-1:exon
so has part: feature:3943119-3943298:-1:exon
so has part: feature:3941254-3942109:-1:exon
so has part: feature:3939836-3940037:-1:exon
so has part: feature:3939469-3939646:-1:exon
so has part: feature:3938205-3938263:-1:exon
so has part: feature:3937255-3937448:-1:exon
so has part: feature:3935444-3935554:-1:exon
so has part: feature:3935289-3935352:-1:exon
so has part: feature:3933350-3933521:-1:exon
so has part: feature:3932687-3932789:-1:exon
so has part: feature:3928089-3928249:-1:exon
so has part: feature:3927598-3927709:-1:exon
so has part: feature:3926514-3926620:-1:exon
so has part: feature:3925847-3925990:-1:exon
so has part: feature:3924972-3925081:-1:exon
so has part: feature:3923609-3923785:-1:exon
so has part: feature:3922437-3922678:-1:exon
so has part: feature:3920158-3920760:-1:exon
so has part: feature:3918733-3918938:-1:exon

XP_049691042.1
type: Protein
SIO_000068: ncbiprotein

position:3918733:-1
position: 3918733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3975200:-1
position: 3975200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3974801-3975200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3974289-3974428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3972783-3972934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3970611-3970743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3968056-3968152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3966507-3966592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3964417-3964542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3962555-3962685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3961201-3961396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3959773-3959910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3959206-3959379:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3958418-3958568:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3955770-3955892:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3953518-3953630:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3952204-3952323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3948115-3948231:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3947308-3947446:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3946056-3946226:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3944622-3944818:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3943841-3944065:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3943119-3943298:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3941254-3942109:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3939836-3940037:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3939469-3939646:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3938205-3938263:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3937255-3937448:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3935444-3935554:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3935289-3935352:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3933350-3933521:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3932687-3932789:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3928089-3928249:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3927598-3927709:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3926514-3926620:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3925847-3925990:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3924972-3925081:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3923609-3923785:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3922437-3922678:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3920158-3920760:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:3918733-3918938:-1:exon

EVA1C
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: EVA1C
note: eva-1 homolog C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3984918..4025160
location: region:3984918-4025160:1
so has part: feature:3984918-4025160:1:exon
subclass of: SO_0000010

126053222
type: Gene
SIO_000068: ncbigene

position:3984918:1
position: 3984918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4025160:1
position: 4025160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3984918-4025160:1:exon

EVA1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: EVA1C
product: eva-1 homolog C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_049835134.1
SIO_010081: EVA1C
subclass of: SO_0000673
so part of: EVA1C
location: join(3984918..3985341,4000564..4000760,4004179..4004302,4007343..4007495,4017977..4018120,4022435..4022506,4023283..4023372,4024695..4025160)
location: region:3984918-4025160:1
so has part: feature:3984918-3985341:1:exon
so has part: feature:4000564-4000760:1:exon
so has part: feature:4004179-4004302:1:exon
so has part: feature:4007343-4007495:1:exon
so has part: feature:4017977-4018120:1:exon
so has part: feature:4022435-4022506:1:exon
so has part: feature:4023283-4023372:1:exon
so has part: feature:4024695-4025160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3984918-3985341:1:exon

position:3985341:1
position: 3985341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4000564-4000760:1:exon

position:4000564:1
position: 4000564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4000760:1
position: 4000760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4004179-4004302:1:exon

position:4004179:1
position: 4004179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4004302:1
position: 4004302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4007343-4007495:1:exon

position:4007343:1
position: 4007343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4007495:1
position: 4007495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4017977-4018120:1:exon

position:4017977:1
position: 4017977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4018120:1
position: 4018120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4022435-4022506:1:exon

position:4022435:1
position: 4022435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4022506:1
position: 4022506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4023283-4023372:1:exon

position:4023283:1
position: 4023283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4023372:1
position: 4023372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4024695-4025160:1:exon

position:4024695:1
position: 4024695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EVA1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: EVA1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein eva-1 homolog C isoform X1
translation: MREGDAGQHPRRRQVEPGRLLRLLSCVILVCSAEVAALADFSGYLTKLLQNHTAYACDGEHLSLRCPRHSTISVQSAFYGQDYHMCSTQEPETRMTEPVNCVAPTSLQKVLDECQNLRSCQLLVNSRVFGPDLCPGTTKFLLVSFKCKPTEYKTKSACENQELKLHCQESKFLIIYSATYGRWAHEENVCSTEMERIPPFDCLSYTALEVLSKRCYGKQRCKIIVTSQDFGSPCLPGVTKYLNVSYACVPKFILTAVNPLVTDSKSSVKQNDGVDLDPKESRLPKKDAISVSNILATFAYIRDHSERAALLFVSSICVGLIFTLCALVIRGSCSNDFQKLHRKKDHLVPETDGAYENSENEEEEEDSSDSDIQDEIAGLYRPSYSGYNSTEAAELAERIERREQIIQEIWMNSGLDMTPPRNMNTFYINEQ
SIO_010081: EVA1C
subclass of: SO_0000673
so part of: EVA1C
location: join(3985215..3985341,4000564..4000760,4004179..4004302,4007343..4007495,4017977..4018120,4022435..4022506,4023283..4023372,4024695..4025083)
location: region:3985215-4025083:1
so has part: feature:3985215-3985341:1:exon
so has part: feature:4000564-4000760:1:exon
so has part: feature:4004179-4004302:1:exon
so has part: feature:4007343-4007495:1:exon
so has part: feature:4017977-4018120:1:exon
so has part: feature:4022435-4022506:1:exon
so has part: feature:4023283-4023372:1:exon
so has part: feature:4024695-4025083:1:exon

XP_049691091.1
type: Protein
SIO_000068: ncbiprotein

position:3985215:1
position: 3985215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4025083:1
position: 4025083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3985215-3985341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4000564-4000760:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4004179-4004302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4007343-4007495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4017977-4018120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4022435-4022506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023283-4023372:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024695-4025083:1:exon

EVA1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: EVA1C
product: eva-1 homolog C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_049835135.1
SIO_010081: EVA1C
subclass of: SO_0000673
so part of: EVA1C
location: join(3985958..3986387,4000564..4000760,4004179..4004302,4007343..4007495,4017977..4018120,4022435..4022506,4023283..4023372,4024695..4025160)
location: region:3985958-4025160:1
so has part: feature:3985958-3986387:1:exon
so has part: feature:4000564-4000760:1:exon
so has part: feature:4004179-4004302:1:exon
so has part: feature:4007343-4007495:1:exon
so has part: feature:4017977-4018120:1:exon
so has part: feature:4022435-4022506:1:exon
so has part: feature:4023283-4023372:1:exon
so has part: feature:4024695-4025160:1:exon

position:3985958:1
position: 3985958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3985958-3986387:1:exon

position:3986387:1
position: 3986387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4000564-4000760:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4004179-4004302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4007343-4007495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4017977-4018120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4022435-4022506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023283-4023372:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024695-4025160:1:exon

EVA1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: EVA1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein eva-1 homolog C isoform X2
translation: MFLVLQDTSLLLESLFGRAVSLLAVFHSYLTKLLQNHTAYACDGEHLSLRCPRHSTISVQSAFYGQDYHMCSTQEPETRMTEPVNCVAPTSLQKVLDECQNLRSCQLLVNSRVFGPDLCPGTTKFLLVSFKCKPTEYKTKSACENQELKLHCQESKFLIIYSATYGRWAHEENVCSTEMERIPPFDCLSYTALEVLSKRCYGKQRCKIIVTSQDFGSPCLPGVTKYLNVSYACVPKFILTAVNPLVTDSKSSVKQNDGVDLDPKESRLPKKDAISVSNILATFAYIRDHSERAALLFVSSICVGLIFTLCALVIRGSCSNDFQKLHRKKDHLVPETDGAYENSENEEEEEDSSDSDIQDEIAGLYRPSYSGYNSTEAAELAERIERREQIIQEIWMNSGLDMTPPRNMNTFYINEQ
SIO_010081: EVA1C
subclass of: SO_0000673
so part of: EVA1C
location: join(3986306..3986387,4000564..4000760,4004179..4004302,4007343..4007495,4017977..4018120,4022435..4022506,4023283..4023372,4024695..4025083)
location: region:3986306-4025083:1
so has part: feature:3986306-3986387:1:exon
so has part: feature:4000564-4000760:1:exon
so has part: feature:4004179-4004302:1:exon
so has part: feature:4007343-4007495:1:exon
so has part: feature:4017977-4018120:1:exon
so has part: feature:4022435-4022506:1:exon
so has part: feature:4023283-4023372:1:exon
so has part: feature:4024695-4025083:1:exon

XP_049691092.1
type: Protein
SIO_000068: ncbiprotein

position:3986306:1
position: 3986306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3986306-3986387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4000564-4000760:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4004179-4004302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4007343-4007495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4017977-4018120:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4022435-4022506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4023283-4023372:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4024695-4025083:1:exon

CFAP298
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: CFAP298
note: cilia and flagella associated protein 298; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4036712..4046859)
location: region:4036712-4046859:-1
so has part: feature:4036712-4046859:-1:exon
subclass of: SO_0000010

126053225
type: Gene
SIO_000068: ncbigene

position:4036712:-1
position: 4036712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4046859:-1
position: 4046859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4036712-4046859:-1:exon

CFAP298
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: CFAP298
product: cilia and flagella associated protein 298
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835143.1
SIO_010081: CFAP298
subclass of: SO_0000673
so part of: CFAP298
location: complement(join(4036712..4037246,4037347..4037442,4039135..4039266,4039732..4039890,4042037..4042104,4043932..4044099,4046456..4046859))
location: region:4036712-4046859:-1
so has part: feature:4046456-4046859:-1:exon
so has part: feature:4043932-4044099:-1:exon
so has part: feature:4042037-4042104:-1:exon
so has part: feature:4039732-4039890:-1:exon
so has part: feature:4039135-4039266:-1:exon
so has part: feature:4037347-4037442:-1:exon
so has part: feature:4036712-4037246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4046456-4046859:-1:exon

position:4046456:-1
position: 4046456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4043932-4044099:-1:exon

position:4043932:-1
position: 4043932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4044099:-1
position: 4044099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4042037-4042104:-1:exon

position:4042037:-1
position: 4042037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4042104:-1
position: 4042104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4039732-4039890:-1:exon

position:4039732:-1
position: 4039732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4039890:-1
position: 4039890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4039135-4039266:-1:exon

position:4039135:-1
position: 4039135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4039266:-1
position: 4039266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4037347-4037442:-1:exon

position:4037347:-1
position: 4037347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4037442:-1
position: 4037442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4036712-4037246:-1:exon

position:4037246:-1
position: 4037246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP298
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: CFAP298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 298
translation: MVRLHVKRGDESQFLLEAAGSARLADLAPLVARIYNGRLKVQRLCSEMQELAEHGVFLPYNMQGLTDEQIEELKLKDEWAEKCVPSGGSVFKKDEIGRRNGHAPNEKMQQVIKKTIEEAKALISRKQVQAGVCVNMEMVKDALDQLRGAVMIVYPMGLPPHDPVRMEFEDKEDLSGTHAGLEVIEESEAQLWWAGKELKETKLLSDYIGKNEKTTIIVKIQKKGQGAPGREPLISHEEQKQMMLYYYRKQEELKKLEEDDDDSFLNAEWADNHALKRQFHGVKDIKWRPR
SIO_010081: CFAP298
subclass of: SO_0000673
so part of: CFAP298
location: complement(join(4037136..4037246,4037347..4037442,4039135..4039266,4039732..4039890,4042037..4042104,4043932..4044099,4046456..4046594))
location: region:4037136-4046594:-1
so has part: feature:4046456-4046594:-1:exon
so has part: feature:4043932-4044099:-1:exon
so has part: feature:4042037-4042104:-1:exon
so has part: feature:4039732-4039890:-1:exon
so has part: feature:4039135-4039266:-1:exon
so has part: feature:4037347-4037442:-1:exon
so has part: feature:4037136-4037246:-1:exon

XP_049691100.1
type: Protein
SIO_000068: ncbiprotein

position:4037136:-1
position: 4037136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4046594:-1
position: 4046594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4046456-4046594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4043932-4044099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4042037-4042104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4039732-4039890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4039135-4039266:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4037347-4037442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4037136-4037246:-1:exon

SYNJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: SYNJ1
note: synaptojanin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4047041..4115761)
location: region:4047041-4115761:-1
so has part: feature:4047041-4115761:-1:exon
subclass of: SO_0000010

126053214
type: Gene
SIO_000068: ncbigene

position:4047041:-1
position: 4047041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4115761:-1
position: 4115761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4047041-4115761:-1:exon

SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835095.1
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4047041..4050235,4054662..4054882,4055565..4055673,4059832..4059902,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114326,4115661..4115761))
location: region:4047041-4115761:-1
so has part: feature:4115661-4115761:-1:exon
so has part: feature:4114181-4114326:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4047041-4050235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4115661-4115761:-1:exon

position:4115661:-1
position: 4115661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4114181-4114326:-1:exon

position:4114181:-1
position: 4114181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4114326:-1
position: 4114326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4101895-4101981:-1:exon

position:4101895:-1
position: 4101895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4101981:-1
position: 4101981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4101225-4101492:-1:exon

position:4101225:-1
position: 4101225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4101492:-1
position: 4101492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4098771-4098996:-1:exon

position:4098771:-1
position: 4098771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4098996:-1
position: 4098996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4097449-4097532:-1:exon

position:4097449:-1
position: 4097449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097532:-1
position: 4097532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4096582-4096643:-1:exon

position:4096582:-1
position: 4096582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4096643:-1
position: 4096643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4095956-4096052:-1:exon

position:4095956:-1
position: 4095956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4096052:-1
position: 4096052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4094493-4094662:-1:exon

position:4094493:-1
position: 4094493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4094662:-1
position: 4094662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4092337-4092418:-1:exon

position:4092337:-1
position: 4092337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4092418:-1
position: 4092418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4089432-4089584:-1:exon

position:4089432:-1
position: 4089432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4089584:-1
position: 4089584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4086152-4086317:-1:exon

position:4086152:-1
position: 4086152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4086317:-1
position: 4086317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4079883-4080074:-1:exon

position:4079883:-1
position: 4079883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4080074:-1
position: 4080074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4079662-4079746:-1:exon

position:4079662:-1
position: 4079662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4079746:-1
position: 4079746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4078235-4078375:-1:exon

position:4078235:-1
position: 4078235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4078375:-1
position: 4078375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4077657-4077849:-1:exon

position:4077657:-1
position: 4077657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4077849:-1
position: 4077849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4076190-4076348:-1:exon

position:4076190:-1
position: 4076190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4076348:-1
position: 4076348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4073779-4073935:-1:exon

position:4073779:-1
position: 4073779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4073935:-1
position: 4073935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

position:4073313:-1
position: 4073313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4073430:-1
position: 4073430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

position:4072985:-1
position: 4072985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4073200:-1
position: 4073200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

position:4072116:-1
position: 4072116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4072194:-1
position: 4072194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

position:4070893:-1
position: 4070893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4071055:-1
position: 4071055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

position:4068658:-1
position: 4068658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4068864:-1
position: 4068864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

position:4067538:-1
position: 4067538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4067666:-1
position: 4067666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4059832-4059902:-1:exon

position:4059832:-1
position: 4059832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059902:-1
position: 4059902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4055565-4055673:-1:exon

position:4055565:-1
position: 4055565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4055673:-1
position: 4055673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4054662-4054882:-1:exon

position:4054662:-1
position: 4054662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4054882:-1
position: 4054882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4047041-4050235:-1:exon

position:4050235:-1
position: 4050235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835090.1
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4047041..4050235,4054662..4054882,4055565..4055673,4059832..4059902,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114326,4115661..4115761))
location: region:4047041-4115761:-1
so has part: feature:4115661-4115761:-1:exon
so has part: feature:4114181-4114326:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4084398-4084421:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4047041-4050235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4115661-4115761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4114181-4114326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4084398-4084421:-1:exon

position:4084398:-1
position: 4084398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4084421:-1
position: 4084421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4047041-4050235:-1:exon

SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835089.1
SIO_010081: SYNJ1
subclass of: SO_0000673
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urn:…
SIO_000300: 30
SIO_000628: feature:4047041-4050235:-1:exon

SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835088.1
SIO_010081: SYNJ1
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position:4066882:-1
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position:4066920:-1
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urn:…
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SIO_000300: 31
SIO_000628: feature:4047041-4050235:-1:exon

SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835087.1
SIO_010081: SYNJ1
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position:4059997:-1
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SIO_000628: feature:4047041-4050235:-1:exon

SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835094.1
SIO_010081: SYNJ1
subclass of: SO_0000673
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position:4114321:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4066882-4066920:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4061698-4061745:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4059997-4060035:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4047041-4050235:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X8
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFGGLGAPPSPGVARREVEAQKSPGTQRKDNLVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQIKTNGTYGTKLETQLNSDPFEDLSFKLLVSKMQTSVRTSPVPTLNQKELIQLPSATQRNADILNTVNCMPAMPPIPTFNTSQEHKRSSPNPFITGLNCTNPFTERTPNAGNPFRTEMQESEITSHLLEGRAARNPFPSLNPPSSNTSKPVFSVDASENTFCLRSKSLMVKNVQPKGWVTFDDDDDENFSIKLKPSKSVPDFKRIGSRKSAGSPDLPGTGQNTFLGSDFNFDNDWNKSSTDCFYTMPARRPPAPPIPSRITSNRSPADPFTSLAPKVSPTQDFTER
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4049378..4050235,4054662..4054882,4055565..4055673,4059832..4059902,4059997..4060035,4061698..4061745,4066882..4066920,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086308,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4049378-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086308:-1:exon
so has part: feature:4084398-4084421:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4066882-4066920:-1:exon
so has part: feature:4061698-4061745:-1:exon
so has part: feature:4059997-4060035:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4049378-4050235:-1:exon

XP_049691051.1
type: Protein
SIO_000068: ncbiprotein

position:4049378:-1
position: 4049378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4114304:-1
position: 4114304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4084398-4084421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4066882-4066920:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4061698-4061745:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4059997-4060035:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4049378-4050235:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X9
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQIKTNGTYGTKLETQLNSDPFEDLSFKLLVSKMQTSVRTSPVPTLNQKELIQLPSATQRNADILNTVNCMPAMPPIPTFNTSQEHKRSSPNPFITGLNCTNPFTERTPNAGNPFRTEMQESEITSHLLEGRAARNPFPSLNPPSSNTSKPVFSVDASENTFCLRSKSLMVKNVQPKGWVTFDDDDDENFSIKLKPSKSVPDFKRIGSRKSAGSPDLPGTGQNTFLGSDFNFDNDWNKSSTDCFYTMPARRPPAPPIPSRITSNRSPADPFTSLAPKVSPTQDFTER
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4049378..4050235,4054662..4054882,4055565..4055673,4059832..4059902,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4049378-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4049378-4050235:-1:exon

XP_049691052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4049378-4050235:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X4
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQIKTNGTYGTKLETQLNSDPFEDLSFKLLVSKMQTSVRTSPVPTLNQKELIQLPSATQRNADILNTVNCMPAMPPIPTFNTSQEHKRSSPNPFITGLNCTNPFTERTPNAGNPFRTEMQESEITSHLLEGRAARNPFPSLNPPSSNTSKPVFSVDASENTFCLRSKSLMVKNVQPKGWVTFDDDDDENFSIKLKPSKSVPDFKRIGSRKSAGSPDLPGTGQNTFLGSDFNFDNDWNKSSTDCFYTMPARRPPAPPIPSRITSNRSPADPFTSLAPKVSPTQDFTER
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4049378..4050235,4054662..4054882,4055565..4055673,4059832..4059902,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4049378-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4084398-4084421:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4049378-4050235:-1:exon

XP_049691047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4084398-4084421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4049378-4050235:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X3
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGLGAPPSPGVARREVEVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQIKTNGTYGTKLETQLNSDPFEDLSFKLLVSKMQTSVRTSPVPTLNQKELIQLPSATQRNADILNTVNCMPAMPPIPTFNTSQEHKRSSPNPFITGLNCTNPFTERTPNAGNPFRTEMQESEITSHLLEGRAARNPFPSLNPPSSNTSKPVFSVDASENTFCLRSKSLMVKNVQPKGWVTFDDDDDENFSIKLKPSKSVPDFKRIGSRKSAGSPDLPGTGQNTFLGSDFNFDNDWNKSSTDCFYTMPARRPPAPPIPSRITSNRSPADPFTSLAPKVSPTQDFTER
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4049378..4050235,4054662..4054882,4055565..4055673,4059832..4059902,4061698..4061745,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4049378-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4084398-4084421:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4061698-4061745:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4049378-4050235:-1:exon

XP_049691046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4084398-4084421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4061698-4061745:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4049378-4050235:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X2
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFGGLGAPPSPGVARREVEVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQIKTNGTYGTKLETQLNSDPFEDLSFKLLVSKMQTSVRTSPVPTLNQKELIQLPSATQRNADILNTVNCMPAMPPIPTFNTSQEHKRSSPNPFITGLNCTNPFTERTPNAGNPFRTEMQESEITSHLLEGRAARNPFPSLNPPSSNTSKPVFSVDASENTFCLRSKSLMVKNVQPKGWVTFDDDDDENFSIKLKPSKSVPDFKRIGSRKSAGSPDLPGTGQNTFLGSDFNFDNDWNKSSTDCFYTMPARRPPAPPIPSRITSNRSPADPFTSLAPKVSPTQDFTER
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4049378..4050235,4054662..4054882,4055565..4055673,4059832..4059902,4061698..4061745,4066882..4066920,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4049378-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4084398-4084421:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4066882-4066920:-1:exon
so has part: feature:4061698-4061745:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4049378-4050235:-1:exon

XP_049691045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4084398-4084421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4066882-4066920:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4061698-4061745:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4049378-4050235:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X1
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFGGLGAPPSPGVARREVEAQKSPGTQRKDNLVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQIKTNGTYGTKLETQLNSDPFEDLSFKLLVSKMQTSVRTSPVPTLNQKELIQLPSATQRNADILNTVNCMPAMPPIPTFNTSQEHKRSSPNPFITGLNCTNPFTERTPNAGNPFRTEMQESEITSHLLEGRAARNPFPSLNPPSSNTSKPVFSVDASENTFCLRSKSLMVKNVQPKGWVTFDDDDDENFSIKLKPSKSVPDFKRIGSRKSAGSPDLPGTGQNTFLGSDFNFDNDWNKSSTDCFYTMPARRPPAPPIPSRITSNRSPADPFTSLAPKVSPTQDFTER
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4049378..4050235,4054662..4054882,4055565..4055673,4059832..4059902,4059997..4060035,4061698..4061745,4066882..4066920,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4049378-4114304:-1
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XP_049691044.1
type: Protein
SIO_000068: ncbiprotein

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SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_049835096.1
SIO_010081: SYNJ1
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position:4050123:-1
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position:4052324:-1
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SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835098.1
SIO_010081: SYNJ1
subclass of: SO_0000673
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SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835093.1
SIO_010081: SYNJ1
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SIO_000300: 23
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4052301-4052324:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4050123-4050235:-1:exon

SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835092.1
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4050123..4050235,4052301..4052321,4054662..4054882,4055565..4055673,4059832..4059902,4059997..4060035,4061698..4061745,4066882..4066920,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114326,4115661..4115761))
location: region:4050123-4115761:-1
so has part: feature:4115661-4115761:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4115661-4115761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4114181-4114326:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 5
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SIO_000300: 8
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SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4079662-4079746:-1:exon

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SIO_000300: 16
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4070893-4071055:-1:exon

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SIO_000300: 24
SIO_000628: feature:4068658-4068864:-1:exon

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SIO_000300: 25
SIO_000628: feature:4067538-4067666:-1:exon

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SIO_000628: feature:4066882-4066920:-1:exon

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SIO_000300: 27
SIO_000628: feature:4061698-4061745:-1:exon

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SIO_000300: 28
SIO_000628: feature:4059997-4060035:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4052301-4052321:-1:exon

position:4052321:-1
position: 4052321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4050123-4050235:-1:exon

SYNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: SYNJ1
product: synaptojanin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_049835091.1
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4050123..4050235,4052301..4052324,4054662..4054882,4055565..4055673,4059832..4059902,4059997..4060035,4061698..4061745,4066882..4066920,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114326,4115661..4115761))
location: region:4050123-4115761:-1
so has part: feature:4115661-4115761:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4115661-4115761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4114181-4114326:-1:exon

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SIO_000628: feature:4101895-4101981:-1:exon

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SIO_000300: 4
SIO_000628: feature:4101225-4101492:-1:exon

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SIO_000300: 5
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SIO_000628: feature:4095956-4096052:-1:exon

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SIO_000628: feature:4089432-4089584:-1:exon

urn:…
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urn:…
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SIO_000628: feature:4084398-4084421:-1:exon

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SIO_000628: feature:4079883-4080074:-1:exon

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SIO_000628: feature:4079662-4079746:-1:exon

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SIO_000628: feature:4073779-4073935:-1:exon

urn:…
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SIO_000628: feature:4073313-4073430:-1:exon

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urn:…
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urn:…
SIO_000300: 32
SIO_000628: feature:4052301-4052324:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4050123-4050235:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X10
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFGGLGAPPSPGVARREVEAQKSPGTQRKDNLVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQQEQPSG
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4052304..4052324,4054662..4054882,4055565..4055673,4059832..4059902,4059997..4060035,4061698..4061745,4066882..4066920,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086308,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4052304-4114304:-1
so has part: feature:4114181-4114304:-1:exon
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so has part: feature:4052304-4052324:-1:exon

XP_049691053.1
type: Protein
SIO_000068: ncbiprotein

position:4052304:-1
position: 4052304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

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urn:…
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urn:…
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urn:…
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SIO_000628: feature:4073779-4073935:-1:exon

urn:…
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SIO_000628: feature:4073313-4073430:-1:exon

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urn:…
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urn:…
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SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
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SIO_000628: feature:4067538-4067666:-1:exon

urn:…
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SIO_000628: feature:4066882-4066920:-1:exon

urn:…
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SIO_000628: feature:4061698-4061745:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4059997-4060035:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4052304-4052324:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X11
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQQEQPSG
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4052304..4052324,4054662..4054882,4055565..4055673,4059832..4059902,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4052304-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4052304-4052324:-1:exon

XP_049691055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4052304-4052324:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X7
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQQEQPSG
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4052304..4052324,4054662..4054882,4055565..4055673,4059832..4059902,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4052304-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4084398-4084421:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4052304-4052324:-1:exon

XP_049691050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4084398-4084421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4052304-4052324:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X6
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFGGLGAPPSPGVARREVEAQKSPGTQRKDNLVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQEQPSG
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4052304..4052321,4054662..4054882,4055565..4055673,4059832..4059902,4059997..4060035,4061698..4061745,4066882..4066920,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4052304-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4084398-4084421:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4066882-4066920:-1:exon
so has part: feature:4061698-4061745:-1:exon
so has part: feature:4059997-4060035:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4052304-4052321:-1:exon

XP_049691049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4084398-4084421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4066882-4066920:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4061698-4061745:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4059997-4060035:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4052304-4052321:-1:exon

SYNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: SYNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptojanin-1 isoform X5
translation: MAFSKGYRVYHKLDPLPFSVIVETRNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAYGLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIDSTDEDRIAEVRKVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIFLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKNLYGKQIIVNLLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLECGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTRFQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKIRVCVGTWNVNGGKQFRSIAFRNQTLTDWLLDAPKLAGIHEFQDRKSKPVDIFAIGFEEMVELNAGNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKDLIRQQNWDPLIAGDQLINQKNSGQIFRGFLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDDSNVTYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIAMQGPPDGTVMVSIRSSSAEENYFDDNLIDELLQKFASYGEVILIRFVEDKMWVTFLEGSSALNVMNLNGTELLGRIINISLKNPDWIRSLEDEMNLEKINIGLPSSTSSTLLCEDAEVTADYDMEGDIDDYSAEVEEILPQHLQPASGSGLGTSPSSSPRSSPCQSPTLSDGPMLPVRPSRAPTKTPGPPVSTHTEFQLGTQQKESSQSLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFGGLGAPPSPGVARREVEAQKSPGTQRKDNLVRNQPPPATGIPSTGTAGYGTTRPTVPPRAGVISAPQSHVRPSGGRPAPETQTKPAEPPRGSPLLPEPLKPQAAGPAQSTTQPPPVLRMQEPLIPVASHPSQTSAPQSLEPPQPPPRSRSSHSLPSESAPSQQQQEQPSG
SIO_010081: SYNJ1
subclass of: SO_0000673
so part of: SYNJ1
location: complement(join(4052304..4052324,4054662..4054882,4055565..4055673,4059832..4059902,4059997..4060035,4061698..4061745,4066882..4066920,4067538..4067666,4068658..4068864,4070893..4071055,4072116..4072194,4072985..4073200,4073313..4073430,4073779..4073935,4076190..4076348,4077657..4077849,4078235..4078375,4079662..4079746,4079883..4080074,4084398..4084421,4086152..4086317,4089432..4089584,4092337..4092418,4094493..4094662,4095956..4096052,4096582..4096643,4097449..4097532,4098771..4098996,4101225..4101492,4101895..4101981,4114181..4114304))
location: region:4052304-4114304:-1
so has part: feature:4114181-4114304:-1:exon
so has part: feature:4101895-4101981:-1:exon
so has part: feature:4101225-4101492:-1:exon
so has part: feature:4098771-4098996:-1:exon
so has part: feature:4097449-4097532:-1:exon
so has part: feature:4096582-4096643:-1:exon
so has part: feature:4095956-4096052:-1:exon
so has part: feature:4094493-4094662:-1:exon
so has part: feature:4092337-4092418:-1:exon
so has part: feature:4089432-4089584:-1:exon
so has part: feature:4086152-4086317:-1:exon
so has part: feature:4084398-4084421:-1:exon
so has part: feature:4079883-4080074:-1:exon
so has part: feature:4079662-4079746:-1:exon
so has part: feature:4078235-4078375:-1:exon
so has part: feature:4077657-4077849:-1:exon
so has part: feature:4076190-4076348:-1:exon
so has part: feature:4073779-4073935:-1:exon
so has part: feature:4073313-4073430:-1:exon
so has part: feature:4072985-4073200:-1:exon
so has part: feature:4072116-4072194:-1:exon
so has part: feature:4070893-4071055:-1:exon
so has part: feature:4068658-4068864:-1:exon
so has part: feature:4067538-4067666:-1:exon
so has part: feature:4066882-4066920:-1:exon
so has part: feature:4061698-4061745:-1:exon
so has part: feature:4059997-4060035:-1:exon
so has part: feature:4059832-4059902:-1:exon
so has part: feature:4055565-4055673:-1:exon
so has part: feature:4054662-4054882:-1:exon
so has part: feature:4052304-4052324:-1:exon

XP_049691048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4114181-4114304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4101895-4101981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4101225-4101492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4098771-4098996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097449-4097532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4096582-4096643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4095956-4096052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094493-4094662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4092337-4092418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4089432-4089584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4086152-4086317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4084398-4084421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4079883-4080074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4079662-4079746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4078235-4078375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4077657-4077849:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4076190-4076348:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4073779-4073935:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4073313-4073430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4072985-4073200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4072116-4072194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4070893-4071055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4068658-4068864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4067538-4067666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4066882-4066920:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4061698-4061745:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4059997-4060035:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4059832-4059902:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4055565-4055673:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4054662-4054882:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4052304-4052324:-1:exon

PAXBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: PAXBP1
note: PAX3 and PAX7 binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4123628..4152783)
location: region:4123628-4152783:-1
so has part: feature:4123628-4152783:-1:exon
subclass of: SO_0000010

126053099
type: Gene
SIO_000068: ncbigene

position:4123628:-1
position: 4123628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152783:-1
position: 4152783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4123628-4152783:-1:exon

PAXBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: PAXBP1
product: PAX3 and PAX7 binding protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049834770.1
SIO_010081: PAXBP1
subclass of: SO_0000673
so part of: PAXBP1
location: complement(join(4123628..4125148,4127291..4127445,4127890..4128036,4129625..4129691,4129955..4130031,4130778..4130899,4131650..4131794,4133624..4133823,4136216..4136331,4136808..4136907,4139160..4139283,4144080..4144269,4145223..4145443,4146290..4146393,4147137..4147232,4148577..4148753,4150369..4150497,4152237..4152783))
location: region:4123628-4152783:-1
so has part: feature:4152237-4152783:-1:exon
so has part: feature:4150369-4150497:-1:exon
so has part: feature:4148577-4148753:-1:exon
so has part: feature:4147137-4147232:-1:exon
so has part: feature:4146290-4146393:-1:exon
so has part: feature:4145223-4145443:-1:exon
so has part: feature:4144080-4144269:-1:exon
so has part: feature:4139160-4139283:-1:exon
so has part: feature:4136808-4136907:-1:exon
so has part: feature:4136216-4136331:-1:exon
so has part: feature:4133624-4133823:-1:exon
so has part: feature:4131650-4131794:-1:exon
so has part: feature:4130778-4130899:-1:exon
so has part: feature:4129955-4130031:-1:exon
so has part: feature:4129625-4129691:-1:exon
so has part: feature:4127890-4128036:-1:exon
so has part: feature:4127291-4127445:-1:exon
so has part: feature:4123628-4125148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4152237-4152783:-1:exon

position:4152237:-1
position: 4152237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4150369-4150497:-1:exon

position:4150369:-1
position: 4150369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4150497:-1
position: 4150497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4148577-4148753:-1:exon

position:4148577:-1
position: 4148577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4148753:-1
position: 4148753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4147137-4147232:-1:exon

position:4147137:-1
position: 4147137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4147232:-1
position: 4147232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4146290-4146393:-1:exon

position:4146290:-1
position: 4146290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4146393:-1
position: 4146393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4145223-4145443:-1:exon

position:4145223:-1
position: 4145223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4145443:-1
position: 4145443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4144080-4144269:-1:exon

position:4144080:-1
position: 4144080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4144269:-1
position: 4144269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4139160-4139283:-1:exon

position:4139160:-1
position: 4139160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139283:-1
position: 4139283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4136808-4136907:-1:exon

position:4136808:-1
position: 4136808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4136907:-1
position: 4136907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4136216-4136331:-1:exon

position:4136216:-1
position: 4136216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4136331:-1
position: 4136331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4133624-4133823:-1:exon

position:4133624:-1
position: 4133624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133823:-1
position: 4133823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4131650-4131794:-1:exon

position:4131650:-1
position: 4131650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131794:-1
position: 4131794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4130778-4130899:-1:exon

position:4130778:-1
position: 4130778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4130899:-1
position: 4130899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4129955-4130031:-1:exon

position:4129955:-1
position: 4129955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4130031:-1
position: 4130031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4129625-4129691:-1:exon

position:4129625:-1
position: 4129625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4129691:-1
position: 4129691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4127890-4128036:-1:exon

position:4127890:-1
position: 4127890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4128036:-1
position: 4128036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4127291-4127445:-1:exon

position:4127291:-1
position: 4127291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4127445:-1
position: 4127445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4123628-4125148:-1:exon

position:4125148:-1
position: 4125148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAXBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: PAXBP1
product: PAX3 and PAX7 binding protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049834769.1
SIO_010081: PAXBP1
subclass of: SO_0000673
so part of: PAXBP1
location: complement(join(4123628..4125148,4127291..4127445,4127890..4128036,4129625..4129691,4129955..4130031,4130778..4130899,4131650..4131794,4133624..4133823,4136216..4136331,4136808..4136907,4139160..4139283,4144080..4144269,4145223..4145443,4146290..4146393,4147011..4147232,4148577..4148753,4150369..4150497,4152237..4152783))
location: region:4123628-4152783:-1
so has part: feature:4152237-4152783:-1:exon
so has part: feature:4150369-4150497:-1:exon
so has part: feature:4148577-4148753:-1:exon
so has part: feature:4147011-4147232:-1:exon
so has part: feature:4146290-4146393:-1:exon
so has part: feature:4145223-4145443:-1:exon
so has part: feature:4144080-4144269:-1:exon
so has part: feature:4139160-4139283:-1:exon
so has part: feature:4136808-4136907:-1:exon
so has part: feature:4136216-4136331:-1:exon
so has part: feature:4133624-4133823:-1:exon
so has part: feature:4131650-4131794:-1:exon
so has part: feature:4130778-4130899:-1:exon
so has part: feature:4129955-4130031:-1:exon
so has part: feature:4129625-4129691:-1:exon
so has part: feature:4127890-4128036:-1:exon
so has part: feature:4127291-4127445:-1:exon
so has part: feature:4123628-4125148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4152237-4152783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4150369-4150497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148577-4148753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147011-4147232:-1:exon

position:4147011:-1
position: 4147011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4146290-4146393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4145223-4145443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4144080-4144269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4139160-4139283:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4136808-4136907:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4136216-4136331:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4133624-4133823:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4131650-4131794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4130778-4130899:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4129955-4130031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4129625-4129691:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4127890-4128036:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4127291-4127445:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4123628-4125148:-1:exon

PAXBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: PAXBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAX3- and PAX7-binding protein 1 isoform X2
translation: MFRKARRVNVRKRNDSEEEDEERDEEPPQEPAPAAGAGGEGPGEASMALAAGPGLLPLPAGCVPLALPGSPAAFACAAGYGAALGLGLGLVGGDRAGLGALPAPSLLPPPPPPPPQQQQQGNGLPGAGRPKEKKRPRENKEVPRASLLSFQDEEEETEEVFKVKKSSYSKKIVKQLKKEYKEDLEKSKVRTEVNSPTDVDPPLEKTGQLKDIGQEDGTANSEHGEEEMEVESEKEEEKPKAGGAFSSALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPVDSEPGIEGSDDEALVAGEQDEELSRWEQEQIRKGINIPQVQPSQPAEVNNLYYQNTYQTLSYGSSYGIPYTYAAYGSSETKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKANRQQYEKHQQSREDSTKAIERLEGSSGGIGEQYKFLQEMRGYVQDLLECFSEKVPLINELESAMHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLESFGRDRVIYQEQVKRRTAEREARRARRRQAREQTGKMADHLEGLSSDDEETSTDITNFNMERDRILKESSKVFEDVLESFYSIDCIKSQFEAWRSKYFASYKDAYIGLCLPKLFNPLIRLQLLIWTPLEGKCRDFETMLWFESLLFYGCEEQEQVKDDADISLLPTIVERVVLPKLTVISENIWDPFSTTQTSRMVAIVQKLVDGYPSVVNAENKNTQMLLKALLLRMRRTLDDDVFMPLYPKNILENKNSGPYLFFQRQFWSSVKLLGNFLQWYGILSNKTLQELSIDGLLNRYILMAFQNSEYGEDSIKKAQSVIACFPKQWFANLKGDKTISQLENFCRYLVHLADTIYRNSIGCSDVEKRNAREHIKQIIKLLASIRALDHAVTVANDHNVKELKILIEGK
SIO_010081: PAXBP1
subclass of: SO_0000673
so part of: PAXBP1
location: complement(join(4125031..4125148,4127291..4127445,4127890..4128036,4129625..4129691,4129955..4130031,4130778..4130899,4131650..4131794,4133624..4133823,4136216..4136331,4136808..4136907,4139160..4139283,4144080..4144269,4145223..4145443,4146290..4146393,4147137..4147232,4148577..4148753,4150369..4150497,4152237..4152702))
location: region:4125031-4152702:-1
so has part: feature:4152237-4152702:-1:exon
so has part: feature:4150369-4150497:-1:exon
so has part: feature:4148577-4148753:-1:exon
so has part: feature:4147137-4147232:-1:exon
so has part: feature:4146290-4146393:-1:exon
so has part: feature:4145223-4145443:-1:exon
so has part: feature:4144080-4144269:-1:exon
so has part: feature:4139160-4139283:-1:exon
so has part: feature:4136808-4136907:-1:exon
so has part: feature:4136216-4136331:-1:exon
so has part: feature:4133624-4133823:-1:exon
so has part: feature:4131650-4131794:-1:exon
so has part: feature:4130778-4130899:-1:exon
so has part: feature:4129955-4130031:-1:exon
so has part: feature:4129625-4129691:-1:exon
so has part: feature:4127890-4128036:-1:exon
so has part: feature:4127291-4127445:-1:exon
so has part: feature:4125031-4125148:-1:exon

XP_049690727.1
type: Protein
SIO_000068: ncbiprotein

position:4125031:-1
position: 4125031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4152702:-1
position: 4152702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4152237-4152702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4150369-4150497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148577-4148753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147137-4147232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4146290-4146393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4145223-4145443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4144080-4144269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4139160-4139283:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4136808-4136907:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4136216-4136331:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4133624-4133823:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4131650-4131794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4130778-4130899:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4129955-4130031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4129625-4129691:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4127890-4128036:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4127291-4127445:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4125031-4125148:-1:exon

PAXBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: PAXBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAX3- and PAX7-binding protein 1 isoform X1
translation: MFRKARRVNVRKRNDSEEEDEERDEEPPQEPAPAAGAGGEGPGEASMALAAGPGLLPLPAGCVPLALPGSPAAFACAAGYGAALGLGLGLVGGDRAGLGALPAPSLLPPPPPPPPQQQQQGNGLPGAGRPKEKKRPRENKEVPRASLLSFQDEEEETEEVFKVKKSSYSKKIVKQLKKEYKEDLEKSKVRTEVNSPTDVDPPLEKTGQLKDIGQEDGTANSEHGEEEMEVESEKEEEKPKAGGAFSSALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPVDSEPGKGRLVREDENDASDDEDDDEKRRIVFTVKEKSQRQKIAEEIGIEGSDDEALVAGEQDEELSRWEQEQIRKGINIPQVQPSQPAEVNNLYYQNTYQTLSYGSSYGIPYTYAAYGSSETKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKANRQQYEKHQQSREDSTKAIERLEGSSGGIGEQYKFLQEMRGYVQDLLECFSEKVPLINELESAMHQLYKQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLESFGRDRVIYQEQVKRRTAEREARRARRRQAREQTGKMADHLEGLSSDDEETSTDITNFNMERDRILKESSKVFEDVLESFYSIDCIKSQFEAWRSKYFASYKDAYIGLCLPKLFNPLIRLQLLIWTPLEGKCRDFETMLWFESLLFYGCEEQEQVKDDADISLLPTIVERVVLPKLTVISENIWDPFSTTQTSRMVAIVQKLVDGYPSVVNAENKNTQMLLKALLLRMRRTLDDDVFMPLYPKNILENKNSGPYLFFQRQFWSSVKLLGNFLQWYGILSNKTLQELSIDGLLNRYILMAFQNSEYGEDSIKKAQSVIACFPKQWFANLKGDKTISQLENFCRYLVHLADTIYRNSIGCSDVEKRNAREHIKQIIKLLASIRALDHAVTVANDHNVKELKILIEGK
SIO_010081: PAXBP1
subclass of: SO_0000673
so part of: PAXBP1
location: complement(join(4125031..4125148,4127291..4127445,4127890..4128036,4129625..4129691,4129955..4130031,4130778..4130899,4131650..4131794,4133624..4133823,4136216..4136331,4136808..4136907,4139160..4139283,4144080..4144269,4145223..4145443,4146290..4146393,4147011..4147232,4148577..4148753,4150369..4150497,4152237..4152702))
location: region:4125031-4152702:-1
so has part: feature:4152237-4152702:-1:exon
so has part: feature:4150369-4150497:-1:exon
so has part: feature:4148577-4148753:-1:exon
so has part: feature:4147011-4147232:-1:exon
so has part: feature:4146290-4146393:-1:exon
so has part: feature:4145223-4145443:-1:exon
so has part: feature:4144080-4144269:-1:exon
so has part: feature:4139160-4139283:-1:exon
so has part: feature:4136808-4136907:-1:exon
so has part: feature:4136216-4136331:-1:exon
so has part: feature:4133624-4133823:-1:exon
so has part: feature:4131650-4131794:-1:exon
so has part: feature:4130778-4130899:-1:exon
so has part: feature:4129955-4130031:-1:exon
so has part: feature:4129625-4129691:-1:exon
so has part: feature:4127890-4128036:-1:exon
so has part: feature:4127291-4127445:-1:exon
so has part: feature:4125031-4125148:-1:exon

XP_049690726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4152237-4152702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4150369-4150497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148577-4148753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147011-4147232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4146290-4146393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4145223-4145443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4144080-4144269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4139160-4139283:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4136808-4136907:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4136216-4136331:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4133624-4133823:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4131650-4131794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4130778-4130899:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4129955-4130031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4129625-4129691:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4127890-4128036:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4127291-4127445:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4125031-4125148:-1:exon

C32H21orf62
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: C32H21orf62
note: chromosome 32 C21orf62 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4155155..4169759)
location: region:4155155-4169759:-1
so has part: feature:4155155-4169759:-1:exon
subclass of: SO_0000010

126053293
type: Gene
SIO_000068: ncbigene

position:4155155:-1
position: 4155155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4169759:-1
position: 4169759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4155155-4169759:-1:exon

C32H21orf62
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: C32H21orf62
product: chromosome 32 C21orf62 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835299.1
SIO_010081: C32H21orf62
subclass of: SO_0000673
so part of: C32H21orf62
location: complement(join(4155155..4157762,4169669..4169759))
location: region:4155155-4169759:-1
so has part: feature:4169669-4169759:-1:exon
so has part: feature:4155155-4157762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4169669-4169759:-1:exon

position:4169669:-1
position: 4169669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4155155-4157762:-1:exon

position:4157762:-1
position: 4157762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C32H21orf62
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: C32H21orf62
product: chromosome 32 C21orf62 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835298.1
SIO_010081: C32H21orf62
subclass of: SO_0000673
so part of: C32H21orf62
location: complement(join(4155155..4157759,4169669..4169742))
location: region:4155155-4169742:-1
so has part: feature:4169669-4169742:-1:exon
so has part: feature:4155155-4157759:-1:exon

position:4169742:-1
position: 4169742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4169669-4169742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4155155-4157759:-1:exon

position:4157759:-1
position: 4157759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C32H21orf62
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: C32H21orf62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C21orf62 homolog
translation: MKPIAFPALSFWPALILAGFLGMHITGSFVRSQKNHTLIFTKENTIRNCSCSADIRDCDYCLANLMCNCKTVLPSTMEKTTYNSHLTIWFTDTSVLEMLLNFTRVWDLKLSFCGTAPLPTEYLAIWGLRKLRVKKVKGRFPEQSVTIYSSSSNEKENSLVVHNKDRQMLVYISFLDTSLFNGYSLLKSYSVENVSSIMEHFPSLLYSDVFSTSDNKSYVVTFIY
SIO_010081: C32H21orf62
subclass of: SO_0000673
so part of: C32H21orf62
location: complement(4157018..4157692)
location: region:4157018-4157692:-1
so has part: feature:4157018-4157692:-1:exon

XP_049691255.1
type: Protein
SIO_000068: ncbiprotein

position:4157018:-1
position: 4157018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4157692:-1
position: 4157692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4157018-4157692:-1:exon

C32H21orf62
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: C32H21orf62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C21orf62 homolog
translation: MKPIAFPALSFWPALILAGFLGMHITGSFVRSQKNHTLIFTKENTIRNCSCSADIRDCDYCLANLMCNCKTVLPSTMEKTTYNSHLTIWFTDTSVLEMLLNFTRVWDLKLSFCGTAPLPTEYLAIWGLRKLRVKKVKGRFPEQSVTIYSSSSNEKENSLVVHNKDRQMLVYISFLDTSLFNGYSLLKSYSVENVSSIMEHFPSLLYSDVFSTSDNKSYVVTFIY
SIO_010081: C32H21orf62
subclass of: SO_0000673
so part of: C32H21orf62
location: complement(4157018..4157692)
location: region:4157018-4157692:-1
so has part: feature:4157018-4157692:-1:exon

XP_049691256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4157018-4157692:-1:exon

OLIG2
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: OLIG2
note: oligodendrocyte transcription factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4266211..4267567
location: region:4266211-4267567:1
so has part: feature:4266211-4267567:1:exon
subclass of: SO_0000010

126053153
type: Gene
SIO_000068: ncbigene

position:4266211:1
position: 4266211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4267567:1
position: 4267567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4266211-4267567:1:exon

OLIG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: OLIG2
product: oligodendrocyte transcription factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_049834947.1
SIO_010081: OLIG2
subclass of: SO_0000673
so part of: OLIG2
location: join(4266211..4266265,4266610..4267567)
location: region:4266211-4267567:1
so has part: feature:4266211-4266265:1:exon
so has part: feature:4266610-4267567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4266211-4266265:1:exon

position:4266265:1
position: 4266265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4266610-4267567:1:exon

position:4266610:1
position: 4266610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OLIG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8957
gene: OLIG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oligodendrocyte transcription factor 2
translation: MDSDASLVSSRPSSPEPDDLFLTARNKGSGGGFTGGTVSSSTQSDSPPELSAELRSAMSAAGVVVVDKLGFKSSSSSSSSSSSSSSKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGFHPAACPGGMGAHSAPLPGHPGHPASHPVHHPILPPAAVSSASLPGSGLSAVSSIRPPHGLLKSPSAAAAAPLGSGFQHWGGMPCPCSMCQVSAPPHHHVSGMGTASLPRLATDTK
SIO_010081: OLIG2
subclass of: SO_0000673
so part of: OLIG2
location: 4266647..4267522
location: region:4266647-4267522:1
so has part: feature:4266647-4267522:1:exon

XP_049690904.1
type: Protein
SIO_000068: ncbiprotein

position:4266647:1
position: 4266647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4267522:1
position: 4267522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4266647-4267522:1:exon

IFNAR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8957
gene: IFNAR2
note: interferon alpha and beta receptor subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4354693..4373618
location: region:4354693-4373618:1
so has part: feature:4354693-4373618:1:exon
subclass of: SO_0000010

126053191
type: Gene
SIO_000068: ncbigene

position:4354693:1
position: 4354693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4373618:1
position: 4373618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4354693-4373618:1:exon

IFNAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8957
gene: IFNAR2
product: interferon alpha and beta receptor subunit 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_049835050.1
SIO_010081: IFNAR2
subclass of: SO_0000673
so part of: IFNAR2
location: join(4354693..4354812,4356100..4356431,4357983..4358079,4361495..4361536,4361854..4361983,4362176..4362339,4365173..4365345,4366858..4367020,4367464..4367582,4372219..4373618)
location: region:4354693-4373618:1
so has part: feature:4354693-4354812:1:exon
so has part: feature:4356100-4356431:1:exon
so has part: feature:4357983-4358079:1:exon
so has part: feature:4361495-4361536:1:exon
so has part: feature:4361854-4361983:1:exon
so has part: feature:4362176-4362339:1:exon
so has part: feature:4365173-4365345:1:exon
so has part: feature:4366858-4367020:1:exon
so has part: feature:4367464-4367582:1:exon
so has part: feature:4372219-4373618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4354693-4354812:1:exon

position:4354812:1
position: 4354812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4356100-4356431:1:exon

position:4356100:1
position: 4356100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4356431:1
position: 4356431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4357983-4358079:1:exon

position:4357983:1
position: 4357983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition