Falco peregrinus isolate bFalPer1 chromosome 19, bFalPer1.pri, whole genome shotgun sequence.
type: Entry
definition: Falco peregrinus isolate bFalPer1 chromosome 19, bFalPer1.pri, whole genome shotgun sequence.
sequence version: NC_073740.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_073740.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA962079
dblink: SAMN28688290
keyword: WGS
keyword: RefSeq
source: Falco peregrinus (peregrine falcon)
organism: Falco peregrinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM042647.1.\nAssembly name: bFalPer1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/06/02. The original whole-genome shotgun project has the\naccession JAMOAR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 14-DEC-2021\nAssembly Method :: Hifiasm v. 0.13.0; purge_dups v. 1.2.3;\n bionano solve v. 3.6.1; salsa2 v. 2.2;\n VGP pipeline v. 2.0; gEVAL v. curation\nAssembly Name :: bFalPer1.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 28x\nSequencing Technology :: PacBio Sequel II HiFi; Arima Genomics\n Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_023634155.1-RS_2023_04\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Best-placed RefSeq; Gnomon;\n cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 04/26/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6533255
topology: linear
so has quality: SO_0000987
location: 1..6533255
location: region:1-6533255:1
RO_0002162: 8954

NC_073740
type: RefSeq
SIO_000068: refseq

PRJNA962079
type: BioProject
SIO_000068: bioproject

SAMN28688290
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6533255:1
position: 6533255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6533255:1:source
so part of: sequence
organism: Falco peregrinus
mol type: genomic DNA
isolate: bFalPer1
chromosome: 19
sex: female
tissue type: blood
dev stage: adult
country: Qatar: Doha
lat lon: 25.286106 N 51.534817 E
collection date: 2020-02-16
collected by: Farooq Omar Al-Ajli, Souq Waqif Falcon Hospital

8954
type: Taxonomy
SIO_000068: taxonomy

LOC114010983
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: LOC114010983
note: uncharacterized LOC114010983; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(339981..343609)
location: region:339981-343609:-1
so has part: feature:339981-343609:-1:exon
subclass of: SO_0000011

114010983
type: Gene
SIO_000068: ncbigene

position:339981:-1
position: 339981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343609:-1
position: 343609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339981-343609:-1:exon

LOC114010983
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8954
nc RNA class: lncRNA
gene: LOC114010983
product: uncharacterized LOC114010983
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008744976.1
SIO_010081: LOC114010983
subclass of: SO_0000673
so part of: LOC114010983
location: complement(join(339981..341430,341989..343609))
location: region:339981-343609:-1
so has part: feature:341989-343609:-1:exon
so has part: feature:339981-341430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341989-343609:-1:exon

position:341989:-1
position: 341989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339981-341430:-1:exon

position:341430:-1
position: 341430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC7
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HDAC7
note: histone deacetylase 7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377544..469044
location: region:377544-469044:1
so has part: feature:377544-469044:1:exon
subclass of: SO_0000010

101922696
type: Gene
SIO_000068: ncbigene

position:377544:1
position: 377544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469044:1
position: 469044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377544-469044:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792313.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(377544..377680,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:377544-469044:1
so has part: feature:377544-377680:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377544-377680:1:exon

position:377680:1
position: 377680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449671-449867:1:exon

position:449671:1
position: 449671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449867:1
position: 449867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451515-451605:1:exon

position:451515:1
position: 451515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451605:1
position: 451605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:453655-453766:1:exon

position:453655:1
position: 453655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453766:1
position: 453766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:454224-454339:1:exon

position:454224:1
position: 454224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454339:1
position: 454339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:454508-454630:1:exon

position:454508:1
position: 454508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454630:1
position: 454630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:455132-455241:1:exon

position:455132:1
position: 455132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455241:1
position: 455241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:455668-455784:1:exon

position:455668:1
position: 455668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455784:1
position: 455784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:456007-456205:1:exon

position:456007:1
position: 456007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456205:1
position: 456205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:457102-457310:1:exon

position:457102:1
position: 457102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457310:1
position: 457310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:457618-457827:1:exon

position:457618:1
position: 457618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457827:1
position: 457827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:458656-458881:1:exon

position:458656:1
position: 458656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458881:1
position: 458881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:459352-459485:1:exon

position:459352:1
position: 459352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459485:1
position: 459485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:460126-460246:1:exon

position:460126:1
position: 460126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460246:1
position: 460246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:460487-460536:1:exon

position:460487:1
position: 460487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460536:1
position: 460536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:461652-461759:1:exon

position:461652:1
position: 461652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461759:1
position: 461759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:461988-462043:1:exon

position:461988:1
position: 461988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462043:1
position: 462043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:462262-462349:1:exon

position:462262:1
position: 462262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462349:1
position: 462349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:462672-462791:1:exon

position:462672:1
position: 462672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462791:1
position: 462791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:463247-463344:1:exon

position:463247:1
position: 463247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463344:1
position: 463344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:463438-463556:1:exon

position:463438:1
position: 463438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463556:1
position: 463556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:463758-463891:1:exon

position:463758:1
position: 463758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463891:1
position: 463891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:464001-464085:1:exon

position:464001:1
position: 464001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464085:1
position: 464085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:464328-464466:1:exon

position:464328:1
position: 464328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464466:1
position: 464466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:465117-469044:1:exon

position:465117:1
position: 465117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792309.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(377571..377680,394588..394674,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:377571-469044:1
so has part: feature:377571-377680:1:exon
so has part: feature:394588-394674:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

position:377571:1
position: 377571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377571-377680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394588-394674:1:exon

position:394588:1
position: 394588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394674:1
position: 394674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X1
translation: MQGQTQVFSLQSPGLDQVTGARTWGASLHFLHPKTAAVNPCTSPRVPQTAPMDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(377662..377680,394588..394674,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:377662-465162:1
so has part: feature:377662-377680:1:exon
so has part: feature:394588-394674:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648284.1
type: Protein
SIO_000068: ncbiprotein

position:377662:1
position: 377662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465162:1
position: 465162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377662-377680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394588-394674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X5
translation: MQGQTQAAVNPCTSPRVPQTAPMDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(377662..377680,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:377662-465162:1
so has part: feature:377662-377680:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377662-377680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792315.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(410311..410521,411918..412338,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:410311-469044:1
so has part: feature:410311-410521:1:exon
so has part: feature:411918-412338:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

position:410311:1
position: 410311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410311-410521:1:exon

position:410521:1
position: 410521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:411918-412338:1:exon

position:411918:1
position: 411918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412338:1
position: 412338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792316.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(410311..410521,411921..412338,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:410311-469044:1
so has part: feature:410311-410521:1:exon
so has part: feature:411921-412338:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410311-410521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411921-412338:1:exon

position:411921:1
position: 411921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792314.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(410311..410521,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:410311-469044:1
so has part: feature:410311-410521:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410311-410521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792311.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(418709..418731,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:418709-469044:1
so has part: feature:418709-418731:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

position:418709:1
position: 418709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418709-418731:1:exon

position:418731:1
position: 418731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792310.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(418821..419038,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:418821-469044:1
so has part: feature:418821-419038:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

position:418821:1
position: 418821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418821-419038:1:exon

position:419038:1
position: 419038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X2
translation: MRSSSFLGAELAGCSQSVAPRLKISATLVMFSPSSAVNPCTSPRVPQTAPMDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(418936..419038,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:418936-465162:1
so has part: feature:418936-419038:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648285.1
type: Protein
SIO_000068: ncbiprotein

position:418936:1
position: 418936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418936-419038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792317.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(436167..436388,449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:436167-469044:1
so has part: feature:436167-436388:1:exon
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

position:436167:1
position: 436167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436167-436388:1:exon

position:436388:1
position: 436388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792312.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(449671..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:449671-469044:1
so has part: feature:449671-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449671-449867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(449718..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:449718-465162:1
so has part: feature:449718-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648286.1
type: Protein
SIO_000068: ncbiprotein

position:449718:1
position: 449718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449718-449867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(449718..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:449718-465162:1
so has part: feature:449718-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449718-449867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(449718..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:449718-465162:1
so has part: feature:449718-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449718-449867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(449718..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:449718-465162:1
so has part: feature:449718-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449718-449867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(449718..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:449718-465162:1
so has part: feature:449718-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449718-449867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X4
translation: MDLRIGQRVVKPGSDTTLLALKHTQQLQHQLFLASLHQQQVEQLTHQHVRVTMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHEGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(449718..449867,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:449718-465162:1
so has part: feature:449718-449867:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449718-449867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:465117-465162:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HDAC7
product: histone deacetylase 7, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792318.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(449944..450090,451515..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..469044)
location: region:449944-469044:1
so has part: feature:449944-450090:1:exon
so has part: feature:451515-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-469044:1:exon

position:449944:1
position: 449944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449944-450090:1:exon

position:450090:1
position: 450090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451515-451605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:465117-469044:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X6
translation: MESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNPTPSAMPYRSLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLMRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPAASSMAHETPLAQRLMMQESSLAQFALQSATSLPAITLGLPATTSTRGESDLRPLSSLAHRVPVLNGPVLTGTHSPMLIPAGLEQHEAASPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHTQFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAGAESSDPARAHVEPTRPGSIIKEPERMPKMMQPQEELVLQQAYLWDSYQRVQQQLLKRQPLAESPVVPTIHAAHRPLSRAQSSPATATVSLPAQDTASKTLSLPVQEQPAKPHFITGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAIVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNPNAVRSLETVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDELMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(451521..451605,453655..453766,454224..454339,454508..454630,455132..455241,455668..455784,456007..456205,457102..457310,457618..457827,458656..458881,459352..459485,460126..460246,460487..460536,461652..461759,461988..462043,462262..462349,462672..462791,463247..463344,463438..463556,463758..463891,464001..464085,464328..464466,465117..465162)
location: region:451521-465162:1
so has part: feature:451521-451605:1:exon
so has part: feature:453655-453766:1:exon
so has part: feature:454224-454339:1:exon
so has part: feature:454508-454630:1:exon
so has part: feature:455132-455241:1:exon
so has part: feature:455668-455784:1:exon
so has part: feature:456007-456205:1:exon
so has part: feature:457102-457310:1:exon
so has part: feature:457618-457827:1:exon
so has part: feature:458656-458881:1:exon
so has part: feature:459352-459485:1:exon
so has part: feature:460126-460246:1:exon
so has part: feature:460487-460536:1:exon
so has part: feature:461652-461759:1:exon
so has part: feature:461988-462043:1:exon
so has part: feature:462262-462349:1:exon
so has part: feature:462672-462791:1:exon
so has part: feature:463247-463344:1:exon
so has part: feature:463438-463556:1:exon
so has part: feature:463758-463891:1:exon
so has part: feature:464001-464085:1:exon
so has part: feature:464328-464466:1:exon
so has part: feature:465117-465162:1:exon

XP_055648293.1
type: Protein
SIO_000068: ncbiprotein

position:451521:1
position: 451521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451521-451605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453655-453766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:454224-454339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454508-454630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455132-455241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455668-455784:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456007-456205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457102-457310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457618-457827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:458656-458881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:459352-459485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460126-460246:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460487-460536:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:461652-461759:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461988-462043:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:462262-462349:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462672-462791:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:463247-463344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463438-463556:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463758-463891:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:464001-464085:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:464328-464466:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:465117-465162:1:exon

LOC101922523
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: LOC101922523
note: twist-related protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(469897..487863)
location: region:469897-487863:-1
so has part: feature:469897-487863:-1:exon
subclass of: SO_0000010

101922523
type: Gene
SIO_000068: ncbigene

position:469897:-1
position: 469897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487863:-1
position: 487863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469897-487863:-1:exon

LOC101922523
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101922523
product: twist-related protein 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_027780578.2
SIO_010081: LOC101922523
subclass of: SO_0000673
so part of: LOC101922523
location: complement(join(469897..470031,476529..486625,487733..487863))
location: region:469897-487863:-1
so has part: feature:487733-487863:-1:exon
so has part: feature:476529-486625:-1:exon
so has part: feature:469897-470031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487733-487863:-1:exon

position:487733:-1
position: 487733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476529-486625:-1:exon

position:476529:-1
position: 476529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486625:-1
position: 486625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:469897-470031:-1:exon

position:470031:-1
position: 470031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101922523
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101922523
product: twist-related protein 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_055792321.1
SIO_010081: LOC101922523
subclass of: SO_0000673
so part of: LOC101922523
location: complement(join(470196..470335,476529..477113,477560..486625,487733..487863))
location: region:470196-487863:-1
so has part: feature:487733-487863:-1:exon
so has part: feature:477560-486625:-1:exon
so has part: feature:476529-477113:-1:exon
so has part: feature:470196-470335:-1:exon

position:470196:-1
position: 470196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487733-487863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477560-486625:-1:exon

position:477560:-1
position: 477560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:476529-477113:-1:exon

position:477113:-1
position: 477113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:470196-470335:-1:exon

position:470335:-1
position: 470335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101922523
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101922523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twist-related protein 2-like
translation: MKEESMCPDSPEGSLVTSEEEGERLHKKCLRKRGQGGKPLEDCGAPSPQGKRSKRSPVPQSFEDMHTQRVIANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDELDHKITSCNYLAHERLSYAFSVWRMEGAWSMSTSH
SIO_010081: LOC101922523
subclass of: SO_0000673
so part of: LOC101922523
location: complement(476535..477020)
location: region:476535-477020:-1
so has part: feature:476535-477020:-1:exon

XP_055648296.1
type: Protein
SIO_000068: ncbiprotein

position:476535:-1
position: 476535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477020:-1
position: 477020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476535-477020:-1:exon

LOC101922523
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101922523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twist-related protein 2-like
translation: MKEESMCPDSPEGSLVTSEEEGERLHKKCLRKRGQGGKPLEDCGAPSPQGKRSKRSPVPQSFEDMHTQRVIANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDELDHKITSCNYLAHERLSYAFSVWRMEGAWSMSTSH
SIO_010081: LOC101922523
subclass of: SO_0000673
so part of: LOC101922523
location: complement(476535..477020)
location: region:476535-477020:-1
so has part: feature:476535-477020:-1:exon

XP_027636379.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476535-477020:-1:exon

SLC48A1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: SLC48A1
note: solute carrier family 48 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(488353..512883)
location: region:488353-512883:-1
so has part: feature:488353-512883:-1:exon
subclass of: SO_0000010

101910336
type: Gene
SIO_000068: ncbigene

position:488353:-1
position: 488353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512883:-1
position: 512883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488353-512883:-1:exon

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: SLC48A1
product: solute carrier family 48 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_055792319.1
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(488353..488667,492548..492675,512656..512883))
location: region:488353-512883:-1
so has part: feature:512656-512883:-1:exon
so has part: feature:492548-492675:-1:exon
so has part: feature:488353-488667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512656-512883:-1:exon

position:512656:-1
position: 512656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492548-492675:-1:exon

position:492548:-1
position: 492548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492675:-1
position: 492675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488353-488667:-1:exon

position:488667:-1
position: 488667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme transporter HRG1 isoform X1
translation: MAVSRLLALRLAYAAAGALTGLSAFFTWSLAPAFRQPATAAAGGLSAICFQDVGKTEAVFQRLRALQPRQTWRPPQMSHAGAAEHGPSKPGQNLLILVMEEKVRSWRTHSSMGRRTAKGTRQTSSDLQGTQLPVRQRCGILSFRSFSTKIIFSVPCPAFIHSSSTLCACTHQITCLVSPGSHARRPVDSNGYG
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(488353..488667,492548..492675,512656..512794))
location: region:488353-512794:-1
so has part: feature:512656-512794:-1:exon
so has part: feature:492548-492675:-1:exon
so has part: feature:488353-488667:-1:exon

XP_055648294.1
type: Protein
SIO_000068: ncbiprotein

position:512794:-1
position: 512794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512656-512794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492548-492675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488353-488667:-1:exon

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: SLC48A1
product: solute carrier family 48 member 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792320.1
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(497277..500252,502068..502235,512656..512839))
location: region:497277-512839:-1
so has part: feature:512656-512839:-1:exon
so has part: feature:502068-502235:-1:exon
so has part: feature:497277-500252:-1:exon

position:497277:-1
position: 497277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512839:-1
position: 512839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512656-512839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502068-502235:-1:exon

position:502068:-1
position: 502068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502235:-1
position: 502235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497277-500252:-1:exon

position:500252:-1
position: 500252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme transporter HRG1 isoform X2
translation: MAVSRLLALRLAYAAAGALTGLSAFFTWSLAPAFRQPATAAAGGLSGVLALWALITHVMYVQDYWRTWLKGLRFFLFIGILFSALSVVGFCTFLVLAITKHQSLTDPRSYYLSCVWSFISLKWAFLLSLYAYRYRNEFADISILSDF
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(500116..500252,502068..502235,512656..512794))
location: region:500116-512794:-1
so has part: feature:512656-512794:-1:exon
so has part: feature:502068-502235:-1:exon
so has part: feature:500116-500252:-1:exon

XP_055648295.1
type: Protein
SIO_000068: ncbiprotein

position:500116:-1
position: 500116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512656-512794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502068-502235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500116-500252:-1:exon

RAPGEF3
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: RAPGEF3
note: Rap guanine nucleotide exchange factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 526972..541931
location: region:526972-541931:1
so has part: feature:526972-541931:1:exon
subclass of: SO_0000010

101924930
type: Gene
SIO_000068: ncbigene

position:526972:1
position: 526972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541931:1
position: 541931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526972-541931:1:exon

RAPGEF3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8954
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008745007.1
SIO_010081: RAPGEF3
so part of: RAPGEF3
location: join(526972..527203,532170..532223,532538..532644,532813..532934,533053..533227,533466..533550,533781..533841,534084..534160,534270..534416,534598..534707,534971..535059,535667..535745,535999..536149,536245..536327,536952..537208,537283..537429,537557..537654,537862..537987,538073..538254,538332..538422,538813..538863,539046..539133,539282..539346,539581..539635,539727..539798,540535..541269,541360..541931)
location: region:526972-541931:1
so has part: feature:526972-527203:1:exon
so has part: feature:532170-532223:1:exon
so has part: feature:532538-532644:1:exon
so has part: feature:532813-532934:1:exon
so has part: feature:533053-533227:1:exon
so has part: feature:533466-533550:1:exon
so has part: feature:533781-533841:1:exon
so has part: feature:534084-534160:1:exon
so has part: feature:534270-534416:1:exon
so has part: feature:534598-534707:1:exon
so has part: feature:534971-535059:1:exon
so has part: feature:535667-535745:1:exon
so has part: feature:535999-536149:1:exon
so has part: feature:536245-536327:1:exon
so has part: feature:536952-537208:1:exon
so has part: feature:537283-537429:1:exon
so has part: feature:537557-537654:1:exon
so has part: feature:537862-537987:1:exon
so has part: feature:538073-538254:1:exon
so has part: feature:538332-538422:1:exon
so has part: feature:538813-538863:1:exon
so has part: feature:539046-539133:1:exon
so has part: feature:539282-539346:1:exon
so has part: feature:539581-539635:1:exon
so has part: feature:539727-539798:1:exon
so has part: feature:540535-541269:1:exon
so has part: feature:541360-541931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526972-527203:1:exon

position:527203:1
position: 527203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532170-532223:1:exon

position:532170:1
position: 532170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532223:1
position: 532223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532538-532644:1:exon

position:532538:1
position: 532538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532644:1
position: 532644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532934:1:exon

position:532813:1
position: 532813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532934:1
position: 532934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:533053-533227:1:exon

position:533053:1
position: 533053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533227:1
position: 533227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:533466-533550:1:exon

position:533466:1
position: 533466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533550:1
position: 533550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:533781-533841:1:exon

position:533781:1
position: 533781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533841:1
position: 533841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:534084-534160:1:exon

position:534084:1
position: 534084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534160:1
position: 534160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:534270-534416:1:exon

position:534270:1
position: 534270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534416:1
position: 534416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:534598-534707:1:exon

position:534598:1
position: 534598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534707:1
position: 534707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:534971-535059:1:exon

position:534971:1
position: 534971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535059:1
position: 535059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:535667-535745:1:exon

position:535667:1
position: 535667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535745:1
position: 535745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:535999-536149:1:exon

position:535999:1
position: 535999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536149:1
position: 536149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:536245-536327:1:exon

position:536245:1
position: 536245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536327:1
position: 536327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:536952-537208:1:exon

position:536952:1
position: 536952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537208:1
position: 537208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:537283-537429:1:exon

position:537283:1
position: 537283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537429:1
position: 537429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:537557-537654:1:exon

position:537557:1
position: 537557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537654:1
position: 537654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:537862-537987:1:exon

position:537862:1
position: 537862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537987:1
position: 537987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:538073-538254:1:exon

position:538073:1
position: 538073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538254:1
position: 538254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:538332-538422:1:exon

position:538332:1
position: 538332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538422:1
position: 538422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:538813-538863:1:exon

position:538813:1
position: 538813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538863:1
position: 538863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:539046-539133:1:exon

position:539046:1
position: 539046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539133:1
position: 539133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:539282-539346:1:exon

position:539282:1
position: 539282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539346:1
position: 539346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:539581-539635:1:exon

position:539581:1
position: 539581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539635:1
position: 539635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:539727-539798:1:exon

position:539727:1
position: 539727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539798:1
position: 539798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:540535-541269:1:exon

position:540535:1
position: 540535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541269:1
position: 541269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:541360-541931:1:exon

position:541360:1
position: 541360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792273.1
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(526972..527203,532170..532223,532538..532644,532813..532934,533053..533227,533466..533550,533781..533841,534084..534160,534270..534416,534598..534707,534971..535059,535667..535745,535999..536149,536245..536327,536952..537208,537283..537429,537557..537654,537862..537987,538073..538254,538332..538422,538813..538863,539046..539133,539282..539346,539581..539635,539727..539798,540538..541931)
location: region:526972-541931:1
so has part: feature:526972-527203:1:exon
so has part: feature:532170-532223:1:exon
so has part: feature:532538-532644:1:exon
so has part: feature:532813-532934:1:exon
so has part: feature:533053-533227:1:exon
so has part: feature:533466-533550:1:exon
so has part: feature:533781-533841:1:exon
so has part: feature:534084-534160:1:exon
so has part: feature:534270-534416:1:exon
so has part: feature:534598-534707:1:exon
so has part: feature:534971-535059:1:exon
so has part: feature:535667-535745:1:exon
so has part: feature:535999-536149:1:exon
so has part: feature:536245-536327:1:exon
so has part: feature:536952-537208:1:exon
so has part: feature:537283-537429:1:exon
so has part: feature:537557-537654:1:exon
so has part: feature:537862-537987:1:exon
so has part: feature:538073-538254:1:exon
so has part: feature:538332-538422:1:exon
so has part: feature:538813-538863:1:exon
so has part: feature:539046-539133:1:exon
so has part: feature:539282-539346:1:exon
so has part: feature:539581-539635:1:exon
so has part: feature:539727-539798:1:exon
so has part: feature:540538-541931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526972-527203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532170-532223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532538-532644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533053-533227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533466-533550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533781-533841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534084-534160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534270-534416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534598-534707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534971-535059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535667-535745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535999-536149:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536245-536327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536952-537208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537283-537429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537557-537654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537862-537987:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538073-538254:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538332-538422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538813-538863:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539046-539133:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539282-539346:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539581-539635:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:539727-539798:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:540538-541931:1:exon

position:540538:1
position: 540538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAPGEF3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8954
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XR_008745008.1
SIO_010081: RAPGEF3
so part of: RAPGEF3
location: join(526972..527203,532170..532223,532538..532644,532813..532934,533053..533227,533466..533550,533781..533841,534084..534160,534270..534416,534598..534707,534971..535059,535667..535745,535999..536149,536245..536327,536952..537208,537283..537429,537557..537654,537862..537987,538073..538254,538332..538422,538813..538863,539046..539133,539282..539346,539431..539635,539727..539799)
location: region:526972-539799:1
so has part: feature:526972-527203:1:exon
so has part: feature:532170-532223:1:exon
so has part: feature:532538-532644:1:exon
so has part: feature:532813-532934:1:exon
so has part: feature:533053-533227:1:exon
so has part: feature:533466-533550:1:exon
so has part: feature:533781-533841:1:exon
so has part: feature:534084-534160:1:exon
so has part: feature:534270-534416:1:exon
so has part: feature:534598-534707:1:exon
so has part: feature:534971-535059:1:exon
so has part: feature:535667-535745:1:exon
so has part: feature:535999-536149:1:exon
so has part: feature:536245-536327:1:exon
so has part: feature:536952-537208:1:exon
so has part: feature:537283-537429:1:exon
so has part: feature:537557-537654:1:exon
so has part: feature:537862-537987:1:exon
so has part: feature:538073-538254:1:exon
so has part: feature:538332-538422:1:exon
so has part: feature:538813-538863:1:exon
so has part: feature:539046-539133:1:exon
so has part: feature:539282-539346:1:exon
so has part: feature:539431-539635:1:exon
so has part: feature:539727-539799:1:exon

position:539799:1
position: 539799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526972-527203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532170-532223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532538-532644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533053-533227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533466-533550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533781-533841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534084-534160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534270-534416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534598-534707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534971-535059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535667-535745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535999-536149:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536245-536327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536952-537208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537283-537429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537557-537654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537862-537987:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538073-538254:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538332-538422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538813-538863:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539046-539133:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539282-539346:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539431-539635:1:exon

position:539431:1
position: 539431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:539727-539799:1:exon

RAPGEF3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8954
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XR_008745009.1
SIO_010081: RAPGEF3
so part of: RAPGEF3
location: join(526972..527203,532170..532223,532538..532644,532813..532934,533053..533227,533466..533550,533781..533841,534084..534160,534270..534416,534598..534707,534971..535059,535667..535745,535999..536149,536245..536327,536952..537208,537283..537429,537557..537654,537862..537987,538073..538254,538332..538422,538813..538863,539046..539133,539282..539346,539448..539635,539727..539799)
location: region:526972-539799:1
so has part: feature:526972-527203:1:exon
so has part: feature:532170-532223:1:exon
so has part: feature:532538-532644:1:exon
so has part: feature:532813-532934:1:exon
so has part: feature:533053-533227:1:exon
so has part: feature:533466-533550:1:exon
so has part: feature:533781-533841:1:exon
so has part: feature:534084-534160:1:exon
so has part: feature:534270-534416:1:exon
so has part: feature:534598-534707:1:exon
so has part: feature:534971-535059:1:exon
so has part: feature:535667-535745:1:exon
so has part: feature:535999-536149:1:exon
so has part: feature:536245-536327:1:exon
so has part: feature:536952-537208:1:exon
so has part: feature:537283-537429:1:exon
so has part: feature:537557-537654:1:exon
so has part: feature:537862-537987:1:exon
so has part: feature:538073-538254:1:exon
so has part: feature:538332-538422:1:exon
so has part: feature:538813-538863:1:exon
so has part: feature:539046-539133:1:exon
so has part: feature:539282-539346:1:exon
so has part: feature:539448-539635:1:exon
so has part: feature:539727-539799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526972-527203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532170-532223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532538-532644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533053-533227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533466-533550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533781-533841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534084-534160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534270-534416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534598-534707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534971-535059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535667-535745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535999-536149:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536245-536327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536952-537208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537283-537429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537557-537654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537862-537987:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538073-538254:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538332-538422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538813-538863:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539046-539133:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539282-539346:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539448-539635:1:exon

position:539448:1
position: 539448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:539727-539799:1:exon

RAPGEF3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8954
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XR_008745010.1
SIO_010081: RAPGEF3
so part of: RAPGEF3
location: join(526972..527203,532170..532223,532538..532644,532813..532934,533053..533227,533466..533550,533781..533841,534084..534160,534270..534416,534598..534707,534971..535059,535667..535745,535999..536149,536245..536327,536952..537208,537283..537429,537557..537654,537862..537987,538073..538254,538332..538422,538813..538863,539046..539133,539282..539346,539525..539635,539727..539799)
location: region:526972-539799:1
so has part: feature:526972-527203:1:exon
so has part: feature:532170-532223:1:exon
so has part: feature:532538-532644:1:exon
so has part: feature:532813-532934:1:exon
so has part: feature:533053-533227:1:exon
so has part: feature:533466-533550:1:exon
so has part: feature:533781-533841:1:exon
so has part: feature:534084-534160:1:exon
so has part: feature:534270-534416:1:exon
so has part: feature:534598-534707:1:exon
so has part: feature:534971-535059:1:exon
so has part: feature:535667-535745:1:exon
so has part: feature:535999-536149:1:exon
so has part: feature:536245-536327:1:exon
so has part: feature:536952-537208:1:exon
so has part: feature:537283-537429:1:exon
so has part: feature:537557-537654:1:exon
so has part: feature:537862-537987:1:exon
so has part: feature:538073-538254:1:exon
so has part: feature:538332-538422:1:exon
so has part: feature:538813-538863:1:exon
so has part: feature:539046-539133:1:exon
so has part: feature:539282-539346:1:exon
so has part: feature:539525-539635:1:exon
so has part: feature:539727-539799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526972-527203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532170-532223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532538-532644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533053-533227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533466-533550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533781-533841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534084-534160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534270-534416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534598-534707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534971-535059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535667-535745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535999-536149:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536245-536327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536952-537208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537283-537429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537557-537654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537862-537987:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538073-538254:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538332-538422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538813-538863:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539046-539133:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539282-539346:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539525-539635:1:exon

position:539525:1
position: 539525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:539727-539799:1:exon

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_055792274.1
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(526972..527203,532170..532223,532538..532644,532813..532934,533053..533227,533466..533550,533781..533841,534084..534160,534270..534416,534598..534707,534971..535059,535667..535745,535999..536149,536245..536327,536952..537208,537283..537429,537557..537654,537862..537987,538073..538254,538332..538422,538813..538863,539046..539133,539282..539346,539475..539518)
location: region:526972-539518:1
so has part: feature:526972-527203:1:exon
so has part: feature:532170-532223:1:exon
so has part: feature:532538-532644:1:exon
so has part: feature:532813-532934:1:exon
so has part: feature:533053-533227:1:exon
so has part: feature:533466-533550:1:exon
so has part: feature:533781-533841:1:exon
so has part: feature:534084-534160:1:exon
so has part: feature:534270-534416:1:exon
so has part: feature:534598-534707:1:exon
so has part: feature:534971-535059:1:exon
so has part: feature:535667-535745:1:exon
so has part: feature:535999-536149:1:exon
so has part: feature:536245-536327:1:exon
so has part: feature:536952-537208:1:exon
so has part: feature:537283-537429:1:exon
so has part: feature:537557-537654:1:exon
so has part: feature:537862-537987:1:exon
so has part: feature:538073-538254:1:exon
so has part: feature:538332-538422:1:exon
so has part: feature:538813-538863:1:exon
so has part: feature:539046-539133:1:exon
so has part: feature:539282-539346:1:exon
so has part: feature:539475-539518:1:exon

position:539518:1
position: 539518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526972-527203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532170-532223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532538-532644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533053-533227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533466-533550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533781-533841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534084-534160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534270-534416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534598-534707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534971-535059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535667-535745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535999-536149:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536245-536327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536952-537208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537283-537429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537557-537654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537862-537987:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538073-538254:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538332-538422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538813-538863:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539046-539133:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539282-539346:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539475-539518:1:exon

position:539475:1
position: 539475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 3 isoform X1
translation: MHLFRSSSYEIRLEGEGGSLPRIQGIRWTPLLDTESTLDYGHSLTQASSEKIWRAGKLLFSHLTSTHPSLIRDHKHHLRHYRQCCSGKELVDWLLSAGLTIQTRSQAIGICQVLVDGGVLTHVKQEWHFQDKETQFYRFAELELSPELGAGLRDAEELLEALAFLAQLGPDALLTMALRKPPAQRTEDELELIFEELLHIKAVAHLSNSVKRELASVLMFESHQRAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVATLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNHILKDVEANTMRLKEHGKVVLVLQKNLQGGSSQPAEARSSRYLVMAGTPEKILEHLLEFMRLDATLYDPVDTLLGDFLLTYTVFMPTSQLCRALLHHFRAEPLEGSEQEKATYSLHKRRKILRLVSQWVLLYGRLLQGDRSTTTLLQNLADLASQDPRLGGLVQEQAQDRRRPRVLENGHSSVSPQPKVEAALGGVRAPGGWRAGSHLPSGDPQQEGWPVGGHCPCSLPPWPQTRSSVNWLTSQEEAVLNSSCALRAQDKVPYEIYRPDHSCLITVLPINASVQDILRSLAPQLGQDGEHILVKVNSAGDKVGLQLDAVGVFTALGLNERLFAVSVEELDSLTPHPEQLGPHVGSSETLDLISSKDLASHLTDYDWNLFKSIHQVEMIHYIIGPQKFHDVTTANLERVMRRFNELQYWVATELCLCPEVGRRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGVSNTAVSRLAKTWERLPHKIRKLHSVLERMLDPSWNHRVYRLAVAKLSPPIIPFVPLLLKDMTFIHEGNRTLAENLINFEKMHMMAKTVRVLQRCRGHAHAPLSPLRNRSPHRTEDPRAVRISTCSEQSLSMRSPVSTWAYLQHLKAIDSQKELLRLSHDLES
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(527120..527203,532170..532223,532538..532644,532813..532934,533053..533227,533466..533550,533781..533841,534084..534160,534270..534416,534598..534707,534971..535059,535667..535745,535999..536149,536245..536327,536952..537208,537283..537429,537557..537654,537862..537987,538073..538254,538332..538422,538813..538863,539046..539133,539282..539346,539581..539635,539727..539798,540538..540656)
location: region:527120-540656:1
so has part: feature:527120-527203:1:exon
so has part: feature:532170-532223:1:exon
so has part: feature:532538-532644:1:exon
so has part: feature:532813-532934:1:exon
so has part: feature:533053-533227:1:exon
so has part: feature:533466-533550:1:exon
so has part: feature:533781-533841:1:exon
so has part: feature:534084-534160:1:exon
so has part: feature:534270-534416:1:exon
so has part: feature:534598-534707:1:exon
so has part: feature:534971-535059:1:exon
so has part: feature:535667-535745:1:exon
so has part: feature:535999-536149:1:exon
so has part: feature:536245-536327:1:exon
so has part: feature:536952-537208:1:exon
so has part: feature:537283-537429:1:exon
so has part: feature:537557-537654:1:exon
so has part: feature:537862-537987:1:exon
so has part: feature:538073-538254:1:exon
so has part: feature:538332-538422:1:exon
so has part: feature:538813-538863:1:exon
so has part: feature:539046-539133:1:exon
so has part: feature:539282-539346:1:exon
so has part: feature:539581-539635:1:exon
so has part: feature:539727-539798:1:exon
so has part: feature:540538-540656:1:exon

XP_055648248.1
type: Protein
SIO_000068: ncbiprotein

position:527120:1
position: 527120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540656:1
position: 540656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527120-527203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532170-532223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532538-532644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533053-533227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533466-533550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533781-533841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534084-534160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534270-534416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534598-534707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534971-535059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535667-535745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535999-536149:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536245-536327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536952-537208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537283-537429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537557-537654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537862-537987:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538073-538254:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538332-538422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538813-538863:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539046-539133:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539282-539346:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539581-539635:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:539727-539798:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:540538-540656:1:exon

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 3 isoform X2
translation: MHLFRSSSYEIRLEGEGGSLPRIQGIRWTPLLDTESTLDYGHSLTQASSEKIWRAGKLLFSHLTSTHPSLIRDHKHHLRHYRQCCSGKELVDWLLSAGLTIQTRSQAIGICQVLVDGGVLTHVKQEWHFQDKETQFYRFAELELSPELGAGLRDAEELLEALAFLAQLGPDALLTMALRKPPAQRTEDELELIFEELLHIKAVAHLSNSVKRELASVLMFESHQRAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVATLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNHILKDVEANTMRLKEHGKVVLVLQKNLQGGSSQPAEARSSRYLVMAGTPEKILEHLLEFMRLDATLYDPVDTLLGDFLLTYTVFMPTSQLCRALLHHFRAEPLEGSEQEKATYSLHKRRKILRLVSQWVLLYGRLLQGDRSTTTLLQNLADLASQDPRLGGLVQEQAQDRRRPRVLENGHSSVSPQPKVEAALGGVRAPGGWRAGSHLPSGDPQQEGWPVGGHCPCSLPPWPQTRSSVNWLTSQEEAVLNSSCALRAQDKVPYEIYRPDHSCLITVLPINASVQDILRSLAPQLGQDGEHILVKVNSAGDKVGLQLDAVGVFTALGLNERLFAVSVEELDSLTPHPEQLGPHVGSSETLDLISSKDLASHLTDYDWNLFKSIHQVEMIHYIIGPQKFHDVTTANLERVMRRFNELQYWVATELCLCPEVGRRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGVSNTAVSRLAKTWERLPHKIRKLHSVLERMLDPSWNHRVYRLAVAKLSPPIIPFVPLLLKDMTFIHEGNRTLAENLINFEKMGPQGSRR
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(527120..527203,532170..532223,532538..532644,532813..532934,533053..533227,533466..533550,533781..533841,534084..534160,534270..534416,534598..534707,534971..535059,535667..535745,535999..536149,536245..536327,536952..537208,537283..537429,537557..537654,537862..537987,538073..538254,538332..538422,538813..538863,539046..539133,539282..539346,539475..539498)
location: region:527120-539498:1
so has part: feature:527120-527203:1:exon
so has part: feature:532170-532223:1:exon
so has part: feature:532538-532644:1:exon
so has part: feature:532813-532934:1:exon
so has part: feature:533053-533227:1:exon
so has part: feature:533466-533550:1:exon
so has part: feature:533781-533841:1:exon
so has part: feature:534084-534160:1:exon
so has part: feature:534270-534416:1:exon
so has part: feature:534598-534707:1:exon
so has part: feature:534971-535059:1:exon
so has part: feature:535667-535745:1:exon
so has part: feature:535999-536149:1:exon
so has part: feature:536245-536327:1:exon
so has part: feature:536952-537208:1:exon
so has part: feature:537283-537429:1:exon
so has part: feature:537557-537654:1:exon
so has part: feature:537862-537987:1:exon
so has part: feature:538073-538254:1:exon
so has part: feature:538332-538422:1:exon
so has part: feature:538813-538863:1:exon
so has part: feature:539046-539133:1:exon
so has part: feature:539282-539346:1:exon
so has part: feature:539475-539498:1:exon

XP_055648249.1
type: Protein
SIO_000068: ncbiprotein

position:539498:1
position: 539498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527120-527203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532170-532223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532538-532644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533053-533227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533466-533550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:533781-533841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534084-534160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534270-534416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534598-534707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534971-535059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535667-535745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535999-536149:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536245-536327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536952-537208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537283-537429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537557-537654:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537862-537987:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538073-538254:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538332-538422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538813-538863:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539046-539133:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539282-539346:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539475-539498:1:exon

ENDOU
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: ENDOU
note: endonuclease, poly(U) specific; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 548857..553631
location: region:548857-553631:1
so has part: feature:548857-553631:1:exon
subclass of: SO_0000010

101924767
type: Gene
SIO_000068: ncbigene

position:548857:1
position: 548857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553631:1
position: 553631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548857-553631:1:exon

ENDOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: ENDOU
product: endonuclease, poly(U) specific, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_055792230.1
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: join(548857..550407,551099..551270,551401..551600,551871..551984,552065..552171,552576..552718,553091..553631)
location: region:548857-553631:1
so has part: feature:548857-550407:1:exon
so has part: feature:551099-551270:1:exon
so has part: feature:551401-551600:1:exon
so has part: feature:551871-551984:1:exon
so has part: feature:552065-552171:1:exon
so has part: feature:552576-552718:1:exon
so has part: feature:553091-553631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548857-550407:1:exon

position:550407:1
position: 550407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551099-551270:1:exon

position:551099:1
position: 551099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551270:1
position: 551270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551401-551600:1:exon

position:551401:1
position: 551401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551600:1
position: 551600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551871-551984:1:exon

position:551871:1
position: 551871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551984:1
position: 551984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552065-552171:1:exon

position:552065:1
position: 552065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552171:1
position: 552171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:552576-552718:1:exon

position:552576:1
position: 552576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552718:1
position: 552718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:553091-553631:1:exon

position:553091:1
position: 553091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ENDOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: ENDOU
product: endonuclease, poly(U) specific, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_027780568.2
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: join(548857..550188,550372..550407,551099..551270,551401..551600,551871..551984,552065..552171,552576..552718,553091..553631)
location: region:548857-553631:1
so has part: feature:548857-550188:1:exon
so has part: feature:550372-550407:1:exon
so has part: feature:551099-551270:1:exon
so has part: feature:551401-551600:1:exon
so has part: feature:551871-551984:1:exon
so has part: feature:552065-552171:1:exon
so has part: feature:552576-552718:1:exon
so has part: feature:553091-553631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548857-550188:1:exon

position:550188:1
position: 550188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550372-550407:1:exon

position:550372:1
position: 550372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551099-551270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551401-551600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551871-551984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552065-552171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552576-552718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553091-553631:1:exon

ENDOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uridylate-specific endoribonuclease isoform X1
translation: MLPGCGLAGTGWWCILRTTLLFLSSKDLYTAPDSCKERCEEPYNENDKCHCNAECEMYHNCCEDYYRHCQPGEHPWVMGGDPEAAREQLWDTKGLVTSMCPPVLMCICVGGPGQPPAHLSITLTFFSFLLCAGGEWAKEAAHTREGFSSRQDTITDEDLLHISEQLYQADHNKAQPTDITIKPQYQASPDETGDQEDRSPQPLYKYVNEKLFSKPTYASFIKLLDNYQRATGREEDVTAEELREQDSFLKEVMKTELMKKLFTFLHEKNRYGSKQEFVADLKEMWFGLYSRGDGERDSSGFEHVFSGEVKKGKVSGFHNWIRFYLLEKQGIINYFSHNFNGPWDTYPDVLGLQFSWDGFYKEVGSAFIGCSPEFEFGLYTLCFVARPGKACHLSLGGYSISIQTYAWTKSTYSNGKKYIATAYVISP
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: join(549975..550407,551099..551270,551401..551600,551871..551984,552065..552171,552576..552718,553091..553205)
location: region:549975-553205:1
so has part: feature:549975-550407:1:exon
so has part: feature:551099-551270:1:exon
so has part: feature:551401-551600:1:exon
so has part: feature:551871-551984:1:exon
so has part: feature:552065-552171:1:exon
so has part: feature:552576-552718:1:exon
so has part: feature:553091-553205:1:exon

XP_055648205.1
type: Protein
SIO_000068: ncbiprotein

position:549975:1
position: 549975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553205:1
position: 553205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549975-550407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551099-551270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551401-551600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551871-551984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552065-552171:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552576-552718:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553091-553205:1:exon

ENDOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uridylate-specific endoribonuclease isoform X2
translation: MLPGCGLAGTGWWCILRTTLLFLSSKDLYTAPDSCKERCEEPYNENDKCHCNAECEMYHNCCEDYYRHCQPGGEWAKEAAHTREGFSSRQDTITDEDLLHISEQLYQADHNKAQPTDITIKPQYQASPDETGDQEDRSPQPLYKYVNEKLFSKPTYASFIKLLDNYQRATGREEDVTAEELREQDSFLKEVMKTELMKKLFTFLHEKNRYGSKQEFVADLKEMWFGLYSRGDGERDSSGFEHVFSGEVKKGKVSGFHNWIRFYLLEKQGIINYFSHNFNGPWDTYPDVLGLQFSWDGFYKEVGSAFIGCSPEFEFGLYTLCFVARPGKACHLSLGGYSISIQTYAWTKSTYSNGKKYIATAYVISP
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: join(549975..550188,550372..550407,551099..551270,551401..551600,551871..551984,552065..552171,552576..552718,553091..553205)
location: region:549975-553205:1
so has part: feature:549975-550188:1:exon
so has part: feature:550372-550407:1:exon
so has part: feature:551099-551270:1:exon
so has part: feature:551401-551600:1:exon
so has part: feature:551871-551984:1:exon
so has part: feature:552065-552171:1:exon
so has part: feature:552576-552718:1:exon
so has part: feature:553091-553205:1:exon

XP_027636369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549975-550188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550372-550407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551099-551270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551401-551600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551871-551984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552065-552171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552576-552718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553091-553205:1:exon

NEUROD4
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: NEUROD4
note: neuronal differentiation 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(566502..572054)
location: region:566502-572054:-1
so has part: feature:566502-572054:-1:exon
subclass of: SO_0000010

101922342
type: Gene
SIO_000068: ncbigene

position:566502:-1
position: 566502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572054:-1
position: 572054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566502-572054:-1:exon

NEUROD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NEUROD4
product: neuronal differentiation 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 21 Proteins
transcript id: XM_027780584.2
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: complement(join(566502..569142,571884..572054))
location: region:566502-572054:-1
so has part: feature:571884-572054:-1:exon
so has part: feature:566502-569142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571884-572054:-1:exon

position:571884:-1
position: 571884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566502-569142:-1:exon

position:569142:-1
position: 569142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEUROD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogenic differentiation factor 4
translation: MTKTYTKPKEMAELVSTQAWMDETLSSKDELKEEDGRQGSFGLMSGLNEEHDSIEEEEEEEDDGEKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPEGKSFVDMLCKGLSQPTSNLVAGCLQLGPQTLFLEKHEEKSPVCESAISSHSFSYQSPGLPSPPYGTMETHLLHLKPPTFKTLVDASFGNHPSDCTTPPYEGPLTPPLSISGNFSLKQDGSPDLDKSYTFMAHYPSVSLAGAHGHASHFQNTVPRYEIPIDMSYESYSHHVGGPQLNAIFNE
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: complement(568138..569133)
location: region:568138-569133:-1
so has part: feature:568138-569133:-1:exon

XP_027636385.2
type: Protein
SIO_000068: ncbiprotein

position:568138:-1
position: 568138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569133:-1
position: 569133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568138-569133:-1:exon

TESPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: TESPA1
note: thymocyte expressed, positive selection associated 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(586543..593750)
location: region:586543-593750:-1
so has part: feature:586543-593750:-1:exon
subclass of: SO_0000010

101924598
type: Gene
SIO_000068: ncbigene

position:586543:-1
position: 586543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593750:-1
position: 593750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586543-593750:-1:exon

TESPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: TESPA1
product: thymocyte expressed, positive selection associated 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027780571.2
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(586543..587104,587220..587313,587847..588958,589211..589419,589520..589603,589704..589740,590018..590071,590260..590309,590911..590953,591036..591232,592795..592934,593642..593750))
location: region:586543-593750:-1
so has part: feature:593642-593750:-1:exon
so has part: feature:592795-592934:-1:exon
so has part: feature:591036-591232:-1:exon
so has part: feature:590911-590953:-1:exon
so has part: feature:590260-590309:-1:exon
so has part: feature:590018-590071:-1:exon
so has part: feature:589704-589740:-1:exon
so has part: feature:589520-589603:-1:exon
so has part: feature:589211-589419:-1:exon
so has part: feature:587847-588958:-1:exon
so has part: feature:587220-587313:-1:exon
so has part: feature:586543-587104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593642-593750:-1:exon

position:593642:-1
position: 593642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:592795-592934:-1:exon

position:592795:-1
position: 592795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592934:-1
position: 592934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591036-591232:-1:exon

position:591036:-1
position: 591036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591232:-1
position: 591232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:590911-590953:-1:exon

position:590911:-1
position: 590911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590953:-1
position: 590953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:590260-590309:-1:exon

position:590260:-1
position: 590260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590309:-1
position: 590309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:590018-590071:-1:exon

position:590018:-1
position: 590018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590071:-1
position: 590071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:589704-589740:-1:exon

position:589704:-1
position: 589704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589740:-1
position: 589740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:589520-589603:-1:exon

position:589520:-1
position: 589520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589603:-1
position: 589603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:589211-589419:-1:exon

position:589211:-1
position: 589211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589419:-1
position: 589419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:587847-588958:-1:exon

position:587847:-1
position: 587847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588958:-1
position: 588958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:587220-587313:-1:exon

position:587220:-1
position: 587220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587313:-1
position: 587313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:586543-587104:-1:exon

position:587104:-1
position: 587104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TESPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: TESPA1
product: thymocyte expressed, positive selection associated 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_013295666.3
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(586543..587104,587220..587313,588648..588958,589211..589419,589520..589603,589704..589740,590018..590071,590260..590309,590911..590953,591036..591232,592795..592934,593642..593743))
location: region:586543-593743:-1
so has part: feature:593642-593743:-1:exon
so has part: feature:592795-592934:-1:exon
so has part: feature:591036-591232:-1:exon
so has part: feature:590911-590953:-1:exon
so has part: feature:590260-590309:-1:exon
so has part: feature:590018-590071:-1:exon
so has part: feature:589704-589740:-1:exon
so has part: feature:589520-589603:-1:exon
so has part: feature:589211-589419:-1:exon
so has part: feature:588648-588958:-1:exon
so has part: feature:587220-587313:-1:exon
so has part: feature:586543-587104:-1:exon

position:593743:-1
position: 593743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593642-593743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592795-592934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591036-591232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590911-590953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590260-590309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590018-590071:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:589704-589740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:589520-589603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:589211-589419:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588648-588958:-1:exon

position:588648:-1
position: 588648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:587220-587313:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586543-587104:-1:exon

TESPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: TESPA1
product: thymocyte expressed, positive selection associated 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027780573.2
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(586543..587104,587220..587313,587847..588958,589211..589419,589520..589603,589809..589849,590018..590071,590260..590309,590911..590929))
location: region:586543-590929:-1
so has part: feature:590911-590929:-1:exon
so has part: feature:590260-590309:-1:exon
so has part: feature:590018-590071:-1:exon
so has part: feature:589809-589849:-1:exon
so has part: feature:589520-589603:-1:exon
so has part: feature:589211-589419:-1:exon
so has part: feature:587847-588958:-1:exon
so has part: feature:587220-587313:-1:exon
so has part: feature:586543-587104:-1:exon

position:590929:-1
position: 590929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590911-590929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590260-590309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590018-590071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589809-589849:-1:exon

position:589809:-1
position: 589809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589849:-1
position: 589849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:589520-589603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589211-589419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587847-588958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587220-587313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586543-587104:-1:exon

TESPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: TESPA1
product: thymocyte expressed, positive selection associated 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027780572.2
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(586543..587104,587220..587313,587847..588958,589211..589419,589520..589603,589704..589849,590018..590071,590260..590309,590911..590929))
location: region:586543-590929:-1
so has part: feature:590911-590929:-1:exon
so has part: feature:590260-590309:-1:exon
so has part: feature:590018-590071:-1:exon
so has part: feature:589704-589849:-1:exon
so has part: feature:589520-589603:-1:exon
so has part: feature:589211-589419:-1:exon
so has part: feature:587847-588958:-1:exon
so has part: feature:587220-587313:-1:exon
so has part: feature:586543-587104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590911-590929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590260-590309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590018-590071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589704-589849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589520-589603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589211-589419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:587847-588958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587220-587313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586543-587104:-1:exon

TESPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: TESPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TESPA1 isoform X3
translation: MEGASLLSPSSWEKRRAWVRQSRCWRTTTVEEEAAAAMQDVPELQPPHLDDVFLEGNPSSKIEMWLQECGSSGEVLPEEMGLPGPCVCGSNGTSFEDDLTLGAEALLLPGSDKVTGRAPQDKHLNLGHSMASSALSSLTTKTSSSISEVLEWWQADAEEILYNLGFVQSEPGAVARIPARFFSAPSHAKGINFQLFLKAQVQRMEMEDPCLMLASRFQQVQALAATADAFFCLYSYVSRTPVQRISPSHLSWAYPDVPDICITPNKPSTLSPVERLKKAVSTMCLYMSPRDEDSPRGTGRVPTVPTSQPSAMGKVVQEVLSASEEDNDDDCDACNEAVQSLHPSIRIQKGFMLHASSGQSDSSGFVEEPVPGQTPIAQLHSTDQTA
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(586992..587104,587220..587313,588648..588958,589211..589419,589520..589603,589704..589740,590018..590071,590260..590309,590911..590953,591036..591201))
location: region:586992-591201:-1
so has part: feature:591036-591201:-1:exon
so has part: feature:590911-590953:-1:exon
so has part: feature:590260-590309:-1:exon
so has part: feature:590018-590071:-1:exon
so has part: feature:589704-589740:-1:exon
so has part: feature:589520-589603:-1:exon
so has part: feature:589211-589419:-1:exon
so has part: feature:588648-588958:-1:exon
so has part: feature:587220-587313:-1:exon
so has part: feature:586992-587104:-1:exon

XP_013151120.1
type: Protein
SIO_000068: ncbiprotein

position:586992:-1
position: 586992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591201:-1
position: 591201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591036-591201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590911-590953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590260-590309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590018-590071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589704-589740:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589520-589603:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:589211-589419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:588648-588958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:587220-587313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586992-587104:-1:exon

TESPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: TESPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TESPA1 isoform X1
translation: MEGASLLSPSSWEKRRAWVRQSRCWRTTTVEEEAAAAMQDVPELQPPHLDDVFLEGNPSSKIEMWLQECGSSGEVLPEEMGLPGPCVCGSNGTSFEDDLTLGAEALLLPGSDKVTGRAPQDKHLNLGHSMASSALSSLTTKTSSSISEVLEWWQADAEEILYNLGFVQSEPGAVARIPARFFSAPSHAKGINFQLFLKAQVQRMEMEDPCLMLASRFQQVQALAATADAFFCLYSYVSRTPVQRISPSHLSWAYPDVPDICITPNKPSTLSPVERLKKAVSTMCLYMSPRDEDSPRGTGRVPTVPTSQPSAMGKVVQEVLERVREERFWFDPAHVLKGWGRAGRTGMVQHEWGAKGGPPMLPPPWLVQGGPVCSHQGGVDAPACCGAEQEPFPQPAPTGALVGAVWGHLERSCPHGQGSVGSPAAVVQGAGDALCLAGAAQVTMEDHRLDAAAPWVNATLSMTLGPLTPPASQMWVTPECSEGLRSEGDSSFGFGSWRTSSMRMAGSHGCHPDPLDPTGVHSPGSGTPRAGGHWTQWSRGRFQGGTPRDPGRQQGDSLGLQPTGKGPLLHCRSWQELVDSFEMEEVLSASEEDNDDDCDACNEAVQSLHPSIRIQKGFMLHASSGQSDSSGFVEEPVPGQTPIAQLHSTDQTA
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(586992..587104,587220..587313,587847..588958,589211..589419,589520..589603,589704..589740,590018..590071,590260..590309,590911..590953,591036..591201))
location: region:586992-591201:-1
so has part: feature:591036-591201:-1:exon
so has part: feature:590911-590953:-1:exon
so has part: feature:590260-590309:-1:exon
so has part: feature:590018-590071:-1:exon
so has part: feature:589704-589740:-1:exon
so has part: feature:589520-589603:-1:exon
so has part: feature:589211-589419:-1:exon
so has part: feature:587847-588958:-1:exon
so has part: feature:587220-587313:-1:exon
so has part: feature:586992-587104:-1:exon

XP_027636372.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591036-591201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590911-590953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590260-590309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590018-590071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589704-589740:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589520-589603:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:589211-589419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587847-588958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:587220-587313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586992-587104:-1:exon

TESPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: TESPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TESPA1 isoform X2
translation: MASSALSSLTTKTSSSISEVLEWWQADAEEILYNLGFVQSEPGAVARIPARFFSAPSHAKGINFQLFLKAQVQRMEMEDPCLMLASRFQQVQALAATADAFFCLYSYVSRTPVQRISPSHLSWAYPDVPDICITPNKPSTLSPVERLKKAVSTMCLYMSPRDEDSPRGTGRVPTVPTSQPSAMGKVVQEVLERVREERFWFDPAHVLKGWGRAGRTGMVQHEWGAKGGPPMLPPPWLVQGGPVCSHQGGVDAPACCGAEQEPFPQPAPTGALVGAVWGHLERSCPHGQGSVGSPAAVVQGAGDALCLAGAAQVTMEDHRLDAAAPWVNATLSMTLGPLTPPASQMWVTPECSEGLRSEGDSSFGFGSWRTSSMRMAGSHGCHPDPLDPTGVHSPGSGTPRAGGHWTQWSRGRFQGGTPRDPGRQQGDSLGLQPTGKGPLLHCRSWQELVDSFEMEEVLSASEEDNDDDCDACNEAVQSLHPSIRIQKGFMLHASSGQSDSSGFVEEPVPGQTPIAQLHSTDQTA
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(586992..587104,587220..587313,587847..588958,589211..589419,589520..589566))
location: region:586992-589566:-1
so has part: feature:589520-589566:-1:exon
so has part: feature:589211-589419:-1:exon
so has part: feature:587847-588958:-1:exon
so has part: feature:587220-587313:-1:exon
so has part: feature:586992-587104:-1:exon

XP_027636373.2
type: Protein
SIO_000068: ncbiprotein

position:589566:-1
position: 589566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589520-589566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589211-589419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587847-588958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587220-587313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:586992-587104:-1:exon

TESPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: TESPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TESPA1 isoform X2
translation: MASSALSSLTTKTSSSISEVLEWWQADAEEILYNLGFVQSEPGAVARIPARFFSAPSHAKGINFQLFLKAQVQRMEMEDPCLMLASRFQQVQALAATADAFFCLYSYVSRTPVQRISPSHLSWAYPDVPDICITPNKPSTLSPVERLKKAVSTMCLYMSPRDEDSPRGTGRVPTVPTSQPSAMGKVVQEVLERVREERFWFDPAHVLKGWGRAGRTGMVQHEWGAKGGPPMLPPPWLVQGGPVCSHQGGVDAPACCGAEQEPFPQPAPTGALVGAVWGHLERSCPHGQGSVGSPAAVVQGAGDALCLAGAAQVTMEDHRLDAAAPWVNATLSMTLGPLTPPASQMWVTPECSEGLRSEGDSSFGFGSWRTSSMRMAGSHGCHPDPLDPTGVHSPGSGTPRAGGHWTQWSRGRFQGGTPRDPGRQQGDSLGLQPTGKGPLLHCRSWQELVDSFEMEEVLSASEEDNDDDCDACNEAVQSLHPSIRIQKGFMLHASSGQSDSSGFVEEPVPGQTPIAQLHSTDQTA
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(586992..587104,587220..587313,587847..588958,589211..589419,589520..589566))
location: region:586992-589566:-1
so has part: feature:589520-589566:-1:exon
so has part: feature:589211-589419:-1:exon
so has part: feature:587847-588958:-1:exon
so has part: feature:587220-587313:-1:exon
so has part: feature:586992-587104:-1:exon

XP_027636374.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589520-589566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589211-589419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587847-588958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587220-587313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:586992-587104:-1:exon

PPP1R1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: PPP1R1A
note: protein phosphatase 1 regulatory inhibitor subunit 1A; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 597149..602818
location: region:597149-602818:1
so has part: feature:597149-602818:1:exon
subclass of: SO_0000010

101924432
type: Gene
SIO_000068: ncbigene

position:597149:1
position: 597149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602818:1
position: 602818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597149-602818:1:exon

PPP1R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PPP1R1A
product: protein phosphatase 1 regulatory inhibitor subunit 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins
transcript id: XM_055792324.1
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: join(597149..597281,600395..600455,601350..601387,601490..601553,601801..601989,602104..602198,602517..602818)
location: region:597149-602818:1
so has part: feature:597149-597281:1:exon
so has part: feature:600395-600455:1:exon
so has part: feature:601350-601387:1:exon
so has part: feature:601490-601553:1:exon
so has part: feature:601801-601989:1:exon
so has part: feature:602104-602198:1:exon
so has part: feature:602517-602818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597149-597281:1:exon

position:597281:1
position: 597281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600395-600455:1:exon

position:600395:1
position: 600395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600455:1
position: 600455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601350-601387:1:exon

position:601350:1
position: 601350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601387:1
position: 601387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:601490-601553:1:exon

position:601490:1
position: 601490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601553:1
position: 601553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:601801-601989:1:exon

position:601801:1
position: 601801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601989:1
position: 601989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:602104-602198:1:exon

position:602104:1
position: 602104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602198:1
position: 602198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:602517-602818:1:exon

position:602517:1
position: 602517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP1R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PPP1R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 1A
translation: MEPNSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPANLVLSSDQSSPEIDEDRLPNPLLKSGLAMSPRQRKKVSRTTPTMKELQMMVEHHLCKQAQGEEEEEVAATSQERGPGHCHHGDTEHSHSPGGTCPLAMHEGGPGPGGKRTHGDGRQSLAEEGTHIAPKEGASKGTASSQ
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: join(597201..597281,600395..600455,601350..601387,601490..601553,601801..601989,602104..602198)
location: region:597201-602198:1
so has part: feature:597201-597281:1:exon
so has part: feature:600395-600455:1:exon
so has part: feature:601350-601387:1:exon
so has part: feature:601490-601553:1:exon
so has part: feature:601801-601989:1:exon
so has part: feature:602104-602198:1:exon

XP_055648299.1
type: Protein
SIO_000068: ncbiprotein

position:597201:1
position: 597201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597201-597281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600395-600455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601350-601387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601490-601553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601801-601989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:602104-602198:1:exon

PDE1B
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: PDE1B
note: phosphodiesterase 1B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(603405..615539)
location: region:603405-615539:-1
so has part: feature:603405-615539:-1:exon
subclass of: SO_0000010

101924256
type: Gene
SIO_000068: ncbigene

position:603405:-1
position: 603405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615539:-1
position: 615539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603405-615539:-1:exon

PDE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PDE1B
product: phosphodiesterase 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins
transcript id: XM_055792325.1
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: complement(join(603405..604676,604754..604867,605080..605216,605346..605472,605578..605659,605740..605860,605936..606037,606127..606252,606645..606745,607212..607352,607459..607575,608068..608134,608768..608953,609038..609151,614920..615055,615416..615539))
location: region:603405-615539:-1
so has part: feature:615416-615539:-1:exon
so has part: feature:614920-615055:-1:exon
so has part: feature:609038-609151:-1:exon
so has part: feature:608768-608953:-1:exon
so has part: feature:608068-608134:-1:exon
so has part: feature:607459-607575:-1:exon
so has part: feature:607212-607352:-1:exon
so has part: feature:606645-606745:-1:exon
so has part: feature:606127-606252:-1:exon
so has part: feature:605936-606037:-1:exon
so has part: feature:605740-605860:-1:exon
so has part: feature:605578-605659:-1:exon
so has part: feature:605346-605472:-1:exon
so has part: feature:605080-605216:-1:exon
so has part: feature:604754-604867:-1:exon
so has part: feature:603405-604676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615416-615539:-1:exon

position:615416:-1
position: 615416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614920-615055:-1:exon

position:614920:-1
position: 614920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615055:-1
position: 615055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609038-609151:-1:exon

position:609038:-1
position: 609038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609151:-1
position: 609151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:608768-608953:-1:exon

position:608768:-1
position: 608768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608953:-1
position: 608953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:608068-608134:-1:exon

position:608068:-1
position: 608068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608134:-1
position: 608134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:607459-607575:-1:exon

position:607459:-1
position: 607459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607575:-1
position: 607575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:607212-607352:-1:exon

position:607212:-1
position: 607212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607352:-1
position: 607352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:606645-606745:-1:exon

position:606645:-1
position: 606645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606745:-1
position: 606745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:606127-606252:-1:exon

position:606127:-1
position: 606127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606252:-1
position: 606252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:605936-606037:-1:exon

position:605936:-1
position: 605936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606037:-1
position: 606037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:605740-605860:-1:exon

position:605740:-1
position: 605740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605860:-1
position: 605860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:605578-605659:-1:exon

position:605578:-1
position: 605578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605659:-1
position: 605659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:605346-605472:-1:exon

position:605346:-1
position: 605346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605472:-1
position: 605472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:605080-605216:-1:exon

position:605080:-1
position: 605080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605216:-1
position: 605216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:604754-604867:-1:exon

position:604754:-1
position: 604754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604867:-1
position: 604867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:603405-604676:-1:exon

position:604676:-1
position: 604676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B
translation: MEPPRSLPGLDPDREGLDPAGGCPSPLEIKSVPSKKIWVKLRALLRYMVKQLETGEVNVEELKRNLEYAASLLEAVYIDETRQMLDTEDELREMGSDAAVPSEVRDWLAATFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTAVGPSYSTSVLNCLKSLDLWCFDVFALNRVTDDHSLRTIVFELFTRHNLNSRFKIPTVFLTTLLDALEAGYGKYRNPYHNQVHAADVTQTVHCFLLRTGMLHYLTEIEVLAIIFAAAIHDYEHTGTTNSFHIQTKSDCAILYNDRSVLENHHISAVFRMMQDDEMNIFVNLTKDEFAELRALVIEMVLATDMSCHFQQVKSMKTSLQQLERIDKSKVLSLLLHAADISHPTKQWSVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKMVLPVTEDGTKAKGNPVASQQASSQWRQPSLDEHLELGDMKADLAGFRSTWAKYIQENKQKWKERAASGITNQVSIEELSPCEEPPPVVPSQHRQNGDVE
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: complement(join(604770..604867,605080..605216,605346..605472,605578..605659,605740..605860,605936..606037,606127..606252,606645..606745,607212..607352,607459..607575,608068..608134,608768..608953,609038..609151,614920..615050))
location: region:604770-615050:-1
so has part: feature:614920-615050:-1:exon
so has part: feature:609038-609151:-1:exon
so has part: feature:608768-608953:-1:exon
so has part: feature:608068-608134:-1:exon
so has part: feature:607459-607575:-1:exon
so has part: feature:607212-607352:-1:exon
so has part: feature:606645-606745:-1:exon
so has part: feature:606127-606252:-1:exon
so has part: feature:605936-606037:-1:exon
so has part: feature:605740-605860:-1:exon
so has part: feature:605578-605659:-1:exon
so has part: feature:605346-605472:-1:exon
so has part: feature:605080-605216:-1:exon
so has part: feature:604770-604867:-1:exon

XP_055648300.1
type: Protein
SIO_000068: ncbiprotein

position:604770:-1
position: 604770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615050:-1
position: 615050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614920-615050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609038-609151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608768-608953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608068-608134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607459-607575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607212-607352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606645-606745:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:606127-606252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:605936-606037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605740-605860:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:605578-605659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:605346-605472:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:605080-605216:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:604770-604867:-1:exon

NCKAP1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: NCKAP1L
note: NCK associated protein 1 like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(618035..627312)
location: region:618035-627312:-1
so has part: feature:618035-627312:-1:exon
subclass of: SO_0000010

101922062
type: Gene
SIO_000068: ncbigene

position:618035:-1
position: 618035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627312:-1
position: 627312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618035-627312:-1:exon

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NCKAP1L
product: NCK associated protein 1 like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027780564.2
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618035..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626846..626941,627124..627312))
location: region:618035-627312:-1
so has part: feature:627124-627312:-1:exon
so has part: feature:626846-626941:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618035-618319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627312:-1:exon

position:627124:-1
position: 627124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626846-626941:-1:exon

position:626846:-1
position: 626846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626941:-1
position: 626941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

position:626407:-1
position: 626407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626499:-1
position: 626499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

position:626240:-1
position: 626240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626296:-1
position: 626296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

position:626013:-1
position: 626013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626155:-1
position: 626155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

position:625824:-1
position: 625824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625914:-1
position: 625914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

position:625600:-1
position: 625600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625737:-1
position: 625737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

position:625457:-1
position: 625457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625505:-1
position: 625505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

position:625167:-1
position: 625167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625323:-1
position: 625323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

position:624884:-1
position: 624884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624940:-1
position: 624940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

position:624454:-1
position: 624454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624550:-1
position: 624550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

position:624106:-1
position: 624106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624215:-1
position: 624215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

position:623780:-1
position: 623780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623912:-1
position: 623912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

position:623587:-1
position: 623587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623668:-1
position: 623668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

position:623233:-1
position: 623233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623291:-1
position: 623291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

position:622927:-1
position: 622927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623072:-1
position: 623072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

position:622470:-1
position: 622470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622602:-1
position: 622602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

position:622142:-1
position: 622142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622261:-1
position: 622261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

position:621735:-1
position: 621735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621874:-1
position: 621874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

position:621437:-1
position: 621437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621568:-1
position: 621568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

position:621109:-1
position: 621109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621327:-1
position: 621327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

position:620859:-1
position: 620859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620989:-1
position: 620989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

position:620677:-1
position: 620677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620774:-1
position: 620774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

position:620328:-1
position: 620328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620421:-1
position: 620421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

position:620122:-1
position: 620122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620204:-1
position: 620204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

position:619930:-1
position: 619930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620010:-1
position: 620010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

position:619640:-1
position: 619640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619733:-1
position: 619733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

position:619360:-1
position: 619360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619476:-1
position: 619476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

position:618999:-1
position: 618999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619108:-1
position: 619108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618903:-1:exon

position:618814:-1
position: 618814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618903:-1
position: 618903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:618035-618319:-1:exon

position:618319:-1
position: 618319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NCKAP1L
product: NCK associated protein 1 like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792326.1
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618035..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626831..626941,627124..627312))
location: region:618035-627312:-1
so has part: feature:627124-627312:-1:exon
so has part: feature:626831-626941:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618035-618319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626941:-1:exon

position:626831:-1
position: 626831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618035-618319:-1:exon

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NCKAP1L
product: NCK associated protein 1 like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005233072.4
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618035..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626831..626941,627124..627312))
location: region:618035-627312:-1
so has part: feature:627124-627312:-1:exon
so has part: feature:626831-626941:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618035-618319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:618035-618319:-1:exon

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NCKAP1L
product: NCK associated protein 1 like, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792327.1
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618035..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626846..626903,627124..627306))
location: region:618035-627306:-1
so has part: feature:627124-627306:-1:exon
so has part: feature:626846-626903:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618035-618319:-1:exon

position:627306:-1
position: 627306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626846-626903:-1:exon

position:626903:-1
position: 626903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:618035-618319:-1:exon

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NCKAP1L
product: NCK associated protein 1 like, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792328.1
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618035..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626831..626903,627124..627306))
location: region:618035-627306:-1
so has part: feature:627124-627306:-1:exon
so has part: feature:626831-626903:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618035-618319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618035-618319:-1:exon

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NCKAP1L
product: NCK associated protein 1 like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027780565.2
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618035..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626831..626903,627124..627306))
location: region:618035-627306:-1
so has part: feature:627124-627306:-1:exon
so has part: feature:626831-626903:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618035-618319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:618035-618319:-1:exon

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NCKAP1L
product: NCK associated protein 1 like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs
transcript id: XM_027780566.2
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618180..618319,618814..618916,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626831..626941,627124..627312))
location: region:618180-627312:-1
so has part: feature:627124-627312:-1:exon
so has part: feature:626831-626941:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618916:-1:exon
so has part: feature:618180-618319:-1:exon

position:618180:-1
position: 618180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618916:-1:exon

position:618916:-1
position: 618916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:618180-618319:-1:exon

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like isoform X2
translation: MSLPSIYQNKFAEKLTILNDRGQGVLVRIYNIKKTCSDPKTRPPFFSDKAMESSIKFISKKFPHLDQHLGPVHKDKGDITRALGPFYHSFLDVLEFRDHVYELLNTIDANQCFFDIHVNYDFTKSYLDLVVTYVSLVLLLARTEDRRLLIGLYHCAHEMSHGSSDPSFTRLGQMVLEYDHPLKKLMEEFGPHTKAVTSALLSLHFLFARRNQGAEQWRSDQLLSLLSTTGTMLSPASSDTMACEYLSLEVMERWILMGFLVCPGALSSSPQCLELWRLALQGSLYITLLRDEALQIHKVTEELLSSLKGYGKRVADLKECKEHAVVHSGSLHRGRRVYLRGAVRELEALLEDQPGLLGPKALFVFMALSFCRDEVRWLVRHAEHVTKTKTPEDFADSHVAELLFLMEQLRSLVRRRVGVLQRYHVQYLARFDALVLSEVIQNLSVCPEEESIILSSFVSSLSALSVKEVDDKEQFDFTPLRLDWFRLQAYTSVAKASLPLGSNPDVGRIMNLIVFHTKLLDSLEELLAESSDLSDLCFYPRPVEKMFVATMEESSMLRYSIAFPLLCSHFSHCVHPMCPEEYPHLKAIALGLCNKFLEEMAWQASTCIMDVCAEQHKLSEQLLPKHCASTVSKARNKKTLKQSAKKGEPERDKPGAESQRKDRTLTTNMDKLHLILAELSLSLNHVPNFTIFEHMVTPAEYLSSHLETRFTKAIVAMAGYSQATQEVVRPSEVLAGLSAYMTFIQSLGQFVGLDTGRIIRSVLLQQTQPRDAAGEQTLTTIYTNWYLEALLRQASTGAIVLAPALQAFTTVPREGEPPFSAAEFSDVSEMRALAELIGPYGMKFLSDNLMWHVGSQVTELKKLVNENMDTLVQLRSSSCKPEQMAALLPRLTSAENVLKRMTIIGEILSFRAMAQQGLREVFSHHCPFLMGPIECLTDVVTPETDIQVTLSIFELASATGIPCEVDPALVNVLASSKTDGSSPEEDYKVACLLLVFLAVSLPLLASDPASIYNTDMDGYNNNIHCLAKAIIHVSAALFTVHNKNIETHLKEFLLLASVSLLHLGQEMDKVRARNRDSISLLMQLIVAESSFLTVDMLEACFPYVLLRNAYREVCRENMLSRVHLH
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618194..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626846..626941,627124..627225))
location: region:618194-627225:-1
so has part: feature:627124-627225:-1:exon
so has part: feature:626846-626941:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618194-618319:-1:exon

XP_027636365.2
type: Protein
SIO_000068: ncbiprotein

position:618194:-1
position: 618194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627225:-1
position: 627225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626846-626941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:618194-618319:-1:exon

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like isoform X4
translation: MSLPSIYQNKFAEKLTILNDRGQGVLVRIYNIKKTCSDPKTRPPFFSDKAMESSIKFISKKFPHLDVRSSTDHVYELLNTIDANQCFFDIHVNYDFTKSYLDLVVTYVSLVLLLARTEDRRLLIGLYHCAHEMSHGSSDPSFTRLGQMVLEYDHPLKKLMEEFGPHTKAVTSALLSLHFLFARRNQGAEQWRSDQLLSLLSTTGTMLSPASSDTMACEYLSLEVMERWILMGFLVCPGALSSSPQCLELWRLALQGSLYITLLRDEALQIHKVTEELLSSLKGYGKRVADLKECKEHAVVHSGSLHRGRRVYLRGAVRELEALLEDQPGLLGPKALFVFMALSFCRDEVRWLVRHAEHVTKTKTPEDFADSHVAELLFLMEQLRSLVRRRVGVLQRYHVQYLARFDALVLSEVIQNLSVCPEEESIILSSFVSSLSALSVKEVDDKEQFDFTPLRLDWFRLQAYTSVAKASLPLGSNPDVGRIMNLIVFHTKLLDSLEELLAESSDLSDLCFYPRPVEKMFVATMEESSMLRYSIAFPLLCSHFSHCVHPMCPEEYPHLKAIALGLCNKFLEEMAWQASTCIMDVCAEQHKLSEQLLPKHCASTVSKARNKKTLKQSAKKGEPERDKPGAESQRKDRTLTTNMDKLHLILAELSLSLNHVPNFTIFEHMVTPAEYLSSHLETRFTKAIVAMAGYSQATQEVVRPSEVLAGLSAYMTFIQSLGQFVGLDTGRIIRSVLLQQTQPRDAAGEQTLTTIYTNWYLEALLRQASTGAIVLAPALQAFTTVPREGEPPFSAAEFSDVSEMRALAELIGPYGMKFLSDNLMWHVGSQVTELKKLVNENMDTLVQLRSSSCKPEQMAALLPRLTSAENVLKRMTIIGEILSFRAMAQQGLREVFSHHCPFLMGPIECLTDVVTPETDIQVTLSIFELASATGIPCEVDPALVNVLASSKTDGSSPEEDYKVACLLLVFLAVSLPLLASDPASIYNTDMDGYNNNIHCLAKAIIHVSAALFTVHNKNIETHLKEFLLLASVSLLHLGQEMDKVRARNRDSISLLMQLIVAESSFLTVDMLEACFPYVLLRNAYREVCRENMLSRVHLH
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618194..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626831..626941,627124..627225))
location: region:618194-627225:-1
so has part: feature:627124-627225:-1:exon
so has part: feature:626831-626941:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618194-618319:-1:exon

XP_055648301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618194-618319:-1:exon

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like isoform X1
translation: MSLPSIYQNKFAEKLTILNDRGQGVLVRIYNIKKTCSDPKTRPPFFSDKAMESSIKFISKKFPHLDVRSSTQHLGPVHKDKGDITRALGPFYHSFLDVLEFRDHVYELLNTIDANQCFFDIHVNYDFTKSYLDLVVTYVSLVLLLARTEDRRLLIGLYHCAHEMSHGSSDPSFTRLGQMVLEYDHPLKKLMEEFGPHTKAVTSALLSLHFLFARRNQGAEQWRSDQLLSLLSTTGTMLSPASSDTMACEYLSLEVMERWILMGFLVCPGALSSSPQCLELWRLALQGSLYITLLRDEALQIHKVTEELLSSLKGYGKRVADLKECKEHAVVHSGSLHRGRRVYLRGAVRELEALLEDQPGLLGPKALFVFMALSFCRDEVRWLVRHAEHVTKTKTPEDFADSHVAELLFLMEQLRSLVRRRVGVLQRYHVQYLARFDALVLSEVIQNLSVCPEEESIILSSFVSSLSALSVKEVDDKEQFDFTPLRLDWFRLQAYTSVAKASLPLGSNPDVGRIMNLIVFHTKLLDSLEELLAESSDLSDLCFYPRPVEKMFVATMEESSMLRYSIAFPLLCSHFSHCVHPMCPEEYPHLKAIALGLCNKFLEEMAWQASTCIMDVCAEQHKLSEQLLPKHCASTVSKARNKKTLKQSAKKGEPERDKPGAESQRKDRTLTTNMDKLHLILAELSLSLNHVPNFTIFEHMVTPAEYLSSHLETRFTKAIVAMAGYSQATQEVVRPSEVLAGLSAYMTFIQSLGQFVGLDTGRIIRSVLLQQTQPRDAAGEQTLTTIYTNWYLEALLRQASTGAIVLAPALQAFTTVPREGEPPFSAAEFSDVSEMRALAELIGPYGMKFLSDNLMWHVGSQVTELKKLVNENMDTLVQLRSSSCKPEQMAALLPRLTSAENVLKRMTIIGEILSFRAMAQQGLREVFSHHCPFLMGPIECLTDVVTPETDIQVTLSIFELASATGIPCEVDPALVNVLASSKTDGSSPEEDYKVACLLLVFLAVSLPLLASDPASIYNTDMDGYNNNIHCLAKAIIHVSAALFTVHNKNIETHLKEFLLLASVSLLHLGQEMDKVRARNRDSISLLMQLIVAESSFLTVDMLEACFPYVLLRNAYREVCRENMLSRVHLH
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618194..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626831..626941,627124..627225))
location: region:618194-627225:-1
so has part: feature:627124-627225:-1:exon
so has part: feature:626831-626941:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618194-618319:-1:exon

XP_005233129.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:618194-618319:-1:exon

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like isoform X5
translation: MTGDRVSLSASTTSRSDKAMESSIKFISKKFPHLDQHLGPVHKDKGDITRALGPFYHSFLDVLEFRDHVYELLNTIDANQCFFDIHVNYDFTKSYLDLVVTYVSLVLLLARTEDRRLLIGLYHCAHEMSHGSSDPSFTRLGQMVLEYDHPLKKLMEEFGPHTKAVTSALLSLHFLFARRNQGAEQWRSDQLLSLLSTTGTMLSPASSDTMACEYLSLEVMERWILMGFLVCPGALSSSPQCLELWRLALQGSLYITLLRDEALQIHKVTEELLSSLKGYGKRVADLKECKEHAVVHSGSLHRGRRVYLRGAVRELEALLEDQPGLLGPKALFVFMALSFCRDEVRWLVRHAEHVTKTKTPEDFADSHVAELLFLMEQLRSLVRRRVGVLQRYHVQYLARFDALVLSEVIQNLSVCPEEESIILSSFVSSLSALSVKEVDDKEQFDFTPLRLDWFRLQAYTSVAKASLPLGSNPDVGRIMNLIVFHTKLLDSLEELLAESSDLSDLCFYPRPVEKMFVATMEESSMLRYSIAFPLLCSHFSHCVHPMCPEEYPHLKAIALGLCNKFLEEMAWQASTCIMDVCAEQHKLSEQLLPKHCASTVSKARNKKTLKQSAKKGEPERDKPGAESQRKDRTLTTNMDKLHLILAELSLSLNHVPNFTIFEHMVTPAEYLSSHLETRFTKAIVAMAGYSQATQEVVRPSEVLAGLSAYMTFIQSLGQFVGLDTGRIIRSVLLQQTQPRDAAGEQTLTTIYTNWYLEALLRQASTGAIVLAPALQAFTTVPREGEPPFSAAEFSDVSEMRALAELIGPYGMKFLSDNLMWHVGSQVTELKKLVNENMDTLVQLRSSSCKPEQMAALLPRLTSAENVLKRMTIIGEILSFRAMAQQGLREVFSHHCPFLMGPIECLTDVVTPETDIQVTLSIFELASATGIPCEVDPALVNVLASSKTDGSSPEEDYKVACLLLVFLAVSLPLLASDPASIYNTDMDGYNNNIHCLAKAIIHVSAALFTVHNKNIETHLKEFLLLASVSLLHLGQEMDKVRARNRDSISLLMQLIVAESSFLTVDMLEACFPYVLLRNAYREVCRENMLSRVHLH
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618194..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626846..626903,627124..627170))
location: region:618194-627170:-1
so has part: feature:627124-627170:-1:exon
so has part: feature:626846-626903:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618194-618319:-1:exon

XP_055648302.1
type: Protein
SIO_000068: ncbiprotein

position:627170:-1
position: 627170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626846-626903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:618194-618319:-1:exon

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like isoform X7
translation: MTGDRVSLSASTTSRSDKAMESSIKFISKKFPHLDVRSSTDHVYELLNTIDANQCFFDIHVNYDFTKSYLDLVVTYVSLVLLLARTEDRRLLIGLYHCAHEMSHGSSDPSFTRLGQMVLEYDHPLKKLMEEFGPHTKAVTSALLSLHFLFARRNQGAEQWRSDQLLSLLSTTGTMLSPASSDTMACEYLSLEVMERWILMGFLVCPGALSSSPQCLELWRLALQGSLYITLLRDEALQIHKVTEELLSSLKGYGKRVADLKECKEHAVVHSGSLHRGRRVYLRGAVRELEALLEDQPGLLGPKALFVFMALSFCRDEVRWLVRHAEHVTKTKTPEDFADSHVAELLFLMEQLRSLVRRRVGVLQRYHVQYLARFDALVLSEVIQNLSVCPEEESIILSSFVSSLSALSVKEVDDKEQFDFTPLRLDWFRLQAYTSVAKASLPLGSNPDVGRIMNLIVFHTKLLDSLEELLAESSDLSDLCFYPRPVEKMFVATMEESSMLRYSIAFPLLCSHFSHCVHPMCPEEYPHLKAIALGLCNKFLEEMAWQASTCIMDVCAEQHKLSEQLLPKHCASTVSKARNKKTLKQSAKKGEPERDKPGAESQRKDRTLTTNMDKLHLILAELSLSLNHVPNFTIFEHMVTPAEYLSSHLETRFTKAIVAMAGYSQATQEVVRPSEVLAGLSAYMTFIQSLGQFVGLDTGRIIRSVLLQQTQPRDAAGEQTLTTIYTNWYLEALLRQASTGAIVLAPALQAFTTVPREGEPPFSAAEFSDVSEMRALAELIGPYGMKFLSDNLMWHVGSQVTELKKLVNENMDTLVQLRSSSCKPEQMAALLPRLTSAENVLKRMTIIGEILSFRAMAQQGLREVFSHHCPFLMGPIECLTDVVTPETDIQVTLSIFELASATGIPCEVDPALVNVLASSKTDGSSPEEDYKVACLLLVFLAVSLPLLASDPASIYNTDMDGYNNNIHCLAKAIIHVSAALFTVHNKNIETHLKEFLLLASVSLLHLGQEMDKVRARNRDSISLLMQLIVAESSFLTVDMLEACFPYVLLRNAYREVCRENMLSRVHLH
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618194..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626831..626903,627124..627170))
location: region:618194-627170:-1
so has part: feature:627124-627170:-1:exon
so has part: feature:626831-626903:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618194-618319:-1:exon

XP_055648303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618194-618319:-1:exon

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like isoform X3
translation: MTGDRVSLSASTTSRSDKAMESSIKFISKKFPHLDVRSSTQHLGPVHKDKGDITRALGPFYHSFLDVLEFRDHVYELLNTIDANQCFFDIHVNYDFTKSYLDLVVTYVSLVLLLARTEDRRLLIGLYHCAHEMSHGSSDPSFTRLGQMVLEYDHPLKKLMEEFGPHTKAVTSALLSLHFLFARRNQGAEQWRSDQLLSLLSTTGTMLSPASSDTMACEYLSLEVMERWILMGFLVCPGALSSSPQCLELWRLALQGSLYITLLRDEALQIHKVTEELLSSLKGYGKRVADLKECKEHAVVHSGSLHRGRRVYLRGAVRELEALLEDQPGLLGPKALFVFMALSFCRDEVRWLVRHAEHVTKTKTPEDFADSHVAELLFLMEQLRSLVRRRVGVLQRYHVQYLARFDALVLSEVIQNLSVCPEEESIILSSFVSSLSALSVKEVDDKEQFDFTPLRLDWFRLQAYTSVAKASLPLGSNPDVGRIMNLIVFHTKLLDSLEELLAESSDLSDLCFYPRPVEKMFVATMEESSMLRYSIAFPLLCSHFSHCVHPMCPEEYPHLKAIALGLCNKFLEEMAWQASTCIMDVCAEQHKLSEQLLPKHCASTVSKARNKKTLKQSAKKGEPERDKPGAESQRKDRTLTTNMDKLHLILAELSLSLNHVPNFTIFEHMVTPAEYLSSHLETRFTKAIVAMAGYSQATQEVVRPSEVLAGLSAYMTFIQSLGQFVGLDTGRIIRSVLLQQTQPRDAAGEQTLTTIYTNWYLEALLRQASTGAIVLAPALQAFTTVPREGEPPFSAAEFSDVSEMRALAELIGPYGMKFLSDNLMWHVGSQVTELKKLVNENMDTLVQLRSSSCKPEQMAALLPRLTSAENVLKRMTIIGEILSFRAMAQQGLREVFSHHCPFLMGPIECLTDVVTPETDIQVTLSIFELASATGIPCEVDPALVNVLASSKTDGSSPEEDYKVACLLLVFLAVSLPLLASDPASIYNTDMDGYNNNIHCLAKAIIHVSAALFTVHNKNIETHLKEFLLLASVSLLHLGQEMDKVRARNRDSISLLMQLIVAESSFLTVDMLEACFPYVLLRNAYREVCRENMLSRVHLH
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618194..618319,618814..618903,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626831..626903,627124..627170))
location: region:618194-627170:-1
so has part: feature:627124-627170:-1:exon
so has part: feature:626831-626903:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618814-618903:-1:exon
so has part: feature:618194-618319:-1:exon

XP_027636366.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618814-618903:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:618194-618319:-1:exon

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 1-like isoform X6
translation: MSLPSIYQNKFAEKLTILNDRGQGVLVRIYNIKKTCSDPKTRPPFFSDKAMESSIKFISKKFPHLDVRSSTQHLGPVHKDKGDITRALGPFYHSFLDVLEFRDHVYELLNTIDANQCFFDIHVNYDFTKSYLDLVVTYVSLVLLLARTEDRRLLIGLYHCAHEMSHGSSDPSFTRLGQMVLEYDHPLKKLMEEFGPHTKAVTSALLSLHFLFARRNQGAEQWRSDQLLSLLSTTGTMLSPASSDTMACEYLSLEVMERWILMGFLVCPGALSSSPQCLELWRLALQGSLYITLLRDEALQIHKVTEELLSSLKGYGKRVADLKECKEHAVVHSGSLHRGRRVYLRGAVRELEALLEDQPGLLGPKALFVFMALSFCRDEVRWLVRHAEHVTKTKTPEDFADSHVAELLFLMEQLRSLVRRRVGVLQRYHVQYLARFDALVLSEVIQNLSVCPEEESIILSSFVSSLSALSVKEVDDKEQFDFTPLRLDWFRLQAYTSVAKASLPLGSNPDVGRIMNLIVFHTKLLDSLEELLAESSDLSDLCFYPRPVEKMFVATMEESSMLRYSIAFPLLCSHFSHCVHPMCPEEYPHLKAIALGLCNKFLEEMAWQASTCIMDVCAEQHKLSEQLLPKHCASTVSKARNKKTLKQSAKKGEPERDKPGAESQRKDRTLTTNMDKLHLILAELSLSLNHVPNFTIFEHMVTPAEYLSSHLETRFTKAIVAMAGYSQATQEVVRPSEVLAGLSAYMTFIQSLGQFVGLDTGRIIRSVLLQQTQPRDAAGEQTLTTIYTNWYLEALLRQASTGAIVLAPALQAFTTVPREGEPPFSAAEFSDVSEMRALAELIGPYGMKFLSDNLMWHVGSQVTELKKLVNENMDTLVQLRSSSCKPEQMAALLPRLTSAENVLKRMTIIGEILSFRAMAQQGLREVFSHHCPFLMGPIECLTDVVTPETDIQVTLSIFELASATGIPCEVDPALVNVLASSKTDGSSPEEDYKVACLLLVFLAVSLPLLASDPASIYNTDMDGYNNNIHCLAKAIIHVSAALFTVHNKNIETHLKEFLLDLSPAGLCQPPAFGPGDGQGACQEP
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(618839..618916,618999..619108,619360..619476,619640..619733,619930..620010,620122..620204,620328..620421,620677..620774,620859..620989,621109..621327,621437..621568,621735..621874,622142..622261,622470..622602,622927..623072,623233..623291,623587..623668,623780..623912,624106..624215,624454..624550,624884..624940,625167..625323,625457..625505,625600..625737,625824..625914,626013..626155,626240..626296,626407..626499,626831..626941,627124..627225))
location: region:618839-627225:-1
so has part: feature:627124-627225:-1:exon
so has part: feature:626831-626941:-1:exon
so has part: feature:626407-626499:-1:exon
so has part: feature:626240-626296:-1:exon
so has part: feature:626013-626155:-1:exon
so has part: feature:625824-625914:-1:exon
so has part: feature:625600-625737:-1:exon
so has part: feature:625457-625505:-1:exon
so has part: feature:625167-625323:-1:exon
so has part: feature:624884-624940:-1:exon
so has part: feature:624454-624550:-1:exon
so has part: feature:624106-624215:-1:exon
so has part: feature:623780-623912:-1:exon
so has part: feature:623587-623668:-1:exon
so has part: feature:623233-623291:-1:exon
so has part: feature:622927-623072:-1:exon
so has part: feature:622470-622602:-1:exon
so has part: feature:622142-622261:-1:exon
so has part: feature:621735-621874:-1:exon
so has part: feature:621437-621568:-1:exon
so has part: feature:621109-621327:-1:exon
so has part: feature:620859-620989:-1:exon
so has part: feature:620677-620774:-1:exon
so has part: feature:620328-620421:-1:exon
so has part: feature:620122-620204:-1:exon
so has part: feature:619930-620010:-1:exon
so has part: feature:619640-619733:-1:exon
so has part: feature:619360-619476:-1:exon
so has part: feature:618999-619108:-1:exon
so has part: feature:618839-618916:-1:exon

XP_027636367.2
type: Protein
SIO_000068: ncbiprotein

position:618839:-1
position: 618839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627124-627225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626831-626941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626407-626499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626240-626296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626013-626155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625824-625914:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625600-625737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625457-625505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625167-625323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624884-624940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:624454-624550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624106-624215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623780-623912:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623587-623668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623233-623291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:622927-623072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:622470-622602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622142-622261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:621735-621874:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621437-621568:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:621109-621327:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:620859-620989:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:620677-620774:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:620328-620421:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:620122-620204:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:619930-620010:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:619640-619733:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:619360-619476:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:618999-619108:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:618839-618916:-1:exon

GTSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: GTSF1
note: gametocyte specific factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 630849..631948
location: region:630849-631948:1
so has part: feature:630849-631948:1:exon
subclass of: SO_0000010

101923914
type: Gene
SIO_000068: ncbigene

position:630849:1
position: 630849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631948:1
position: 631948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630849-631948:1:exon

GTSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: GTSF1
product: gametocyte specific factor 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027780583.2
SIO_010081: GTSF1
subclass of: SO_0000673
so part of: GTSF1
location: join(630849..631006,631123..631249,631333..631422,631512..631587,631698..631948)
location: region:630849-631948:1
so has part: feature:630849-631006:1:exon
so has part: feature:631123-631249:1:exon
so has part: feature:631333-631422:1:exon
so has part: feature:631512-631587:1:exon
so has part: feature:631698-631948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630849-631006:1:exon

position:631006:1
position: 631006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631123-631249:1:exon

position:631123:1
position: 631123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631249:1
position: 631249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631333-631422:1:exon

position:631333:1
position: 631333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631422:1
position: 631422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:631512-631587:1:exon

position:631512:1
position: 631512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631587:1
position: 631587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:631698-631948:1:exon

position:631698:1
position: 631698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GTSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: GTSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1
translation: MEPQALVQCPYDRSHQVRVSRLPYHLVKCQRNNPQVARKLATCPFNASHRVPHGKLQRHIASCPDQRQPDLPHGMETHLSYRMKQPEVLAAWQDPLSQEDWEAELEDLEDPSPFILNVRTNDLCLPCDSSAPAAPTSQNRDRGAAGVPAAGAKWQAQE
SIO_010081: GTSF1
subclass of: SO_0000673
so part of: GTSF1
location: join(630914..631006,631123..631249,631333..631422,631512..631587,631698..631788)
location: region:630914-631788:1
so has part: feature:630914-631006:1:exon
so has part: feature:631123-631249:1:exon
so has part: feature:631333-631422:1:exon
so has part: feature:631512-631587:1:exon
so has part: feature:631698-631788:1:exon

XP_027636384.1
type: Protein
SIO_000068: ncbiprotein

position:630914:1
position: 630914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631788:1
position: 631788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630914-631006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631123-631249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631333-631422:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631512-631587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631698-631788:1:exon

LOC129782907
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: LOC129782907
note: uncharacterized LOC129782907; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 633515..635999
location: region:633515-635999:1
so has part: feature:633515-635999:1:exon
subclass of: SO_0000011

129782907
type: Gene
SIO_000068: ncbigene

position:633515:1
position: 633515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635999:1
position: 635999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633515-635999:1:exon

LOC129782907
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8954
nc RNA class: lncRNA
gene: LOC129782907
product: uncharacterized LOC129782907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008745023.1
SIO_010081: LOC129782907
subclass of: SO_0000673
so part of: LOC129782907
location: join(633515..634039,634172..634258,634715..635999)
location: region:633515-635999:1
so has part: feature:633515-634039:1:exon
so has part: feature:634172-634258:1:exon
so has part: feature:634715-635999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633515-634039:1:exon

position:634039:1
position: 634039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634172-634258:1:exon

position:634172:1
position: 634172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634258:1
position: 634258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634715-635999:1:exon

position:634715:1
position: 634715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITGA5
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: ITGA5
note: integrin subunit alpha 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 639214..649934
location: region:639214-649934:1
so has part: feature:639214-649934:1:exon
subclass of: SO_0000010

101923738
type: Gene
SIO_000068: ncbigene

position:639214:1
position: 639214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649934:1
position: 649934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639214-649934:1:exon

ITGA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: ITGA5
product: integrin subunit alpha 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_055792329.1
SIO_010081: ITGA5
subclass of: SO_0000673
so part of: ITGA5
location: join(639214..639302,640188..640315,640778..640891,641002..641128,641539..641600,641868..641913,642136..642261,642753..642797,642895..642938,643136..643192,643336..643388,643503..643711,644115..644306,644744..644789,644858..644965,645415..645470,645585..645736,645818..645955,646376..646443,646523..646673,646995..647087,647166..647245,647659..647739,647826..647932,648166..648317,648798..648906,649208..649322,649833..649934)
location: region:639214-649934:1
so has part: feature:639214-639302:1:exon
so has part: feature:640188-640315:1:exon
so has part: feature:640778-640891:1:exon
so has part: feature:641002-641128:1:exon
so has part: feature:641539-641600:1:exon
so has part: feature:641868-641913:1:exon
so has part: feature:642136-642261:1:exon
so has part: feature:642753-642797:1:exon
so has part: feature:642895-642938:1:exon
so has part: feature:643136-643192:1:exon
so has part: feature:643336-643388:1:exon
so has part: feature:643503-643711:1:exon
so has part: feature:644115-644306:1:exon
so has part: feature:644744-644789:1:exon
so has part: feature:644858-644965:1:exon
so has part: feature:645415-645470:1:exon
so has part: feature:645585-645736:1:exon
so has part: feature:645818-645955:1:exon
so has part: feature:646376-646443:1:exon
so has part: feature:646523-646673:1:exon
so has part: feature:646995-647087:1:exon
so has part: feature:647166-647245:1:exon
so has part: feature:647659-647739:1:exon
so has part: feature:647826-647932:1:exon
so has part: feature:648166-648317:1:exon
so has part: feature:648798-648906:1:exon
so has part: feature:649208-649322:1:exon
so has part: feature:649833-649934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639214-639302:1:exon

position:639302:1
position: 639302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:640188-640315:1:exon

position:640188:1
position: 640188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640315:1
position: 640315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:640778-640891:1:exon

position:640778:1
position: 640778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640891:1
position: 640891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641002-641128:1:exon

position:641002:1
position: 641002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641128:1
position: 641128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:641539-641600:1:exon

position:641539:1
position: 641539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641600:1
position: 641600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:641868-641913:1:exon

position:641868:1
position: 641868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641913:1
position: 641913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:642136-642261:1:exon

position:642136:1
position: 642136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642261:1
position: 642261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:642753-642797:1:exon

position:642753:1
position: 642753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642797:1
position: 642797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:642895-642938:1:exon

position:642895:1
position: 642895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642938:1
position: 642938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:643136-643192:1:exon

position:643136:1
position: 643136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643192:1
position: 643192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:643336-643388:1:exon

position:643336:1
position: 643336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643388:1
position: 643388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:643503-643711:1:exon

position:643503:1
position: 643503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643711:1
position: 643711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:644115-644306:1:exon

position:644115:1
position: 644115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644306:1
position: 644306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:644744-644789:1:exon

position:644744:1
position: 644744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644789:1
position: 644789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:644858-644965:1:exon

position:644858:1
position: 644858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644965:1
position: 644965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:645415-645470:1:exon

position:645415:1
position: 645415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645470:1
position: 645470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:645585-645736:1:exon

position:645585:1
position: 645585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645736:1
position: 645736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:645818-645955:1:exon

position:645818:1
position: 645818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645955:1
position: 645955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:646376-646443:1:exon

position:646376:1
position: 646376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646443:1
position: 646443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:646523-646673:1:exon

position:646523:1
position: 646523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646673:1
position: 646673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:646995-647087:1:exon

position:646995:1
position: 646995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647087:1
position: 647087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:647166-647245:1:exon

position:647166:1
position: 647166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647245:1
position: 647245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:647659-647739:1:exon

position:647659:1
position: 647659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647739:1
position: 647739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:647826-647932:1:exon

position:647826:1
position: 647826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647932:1
position: 647932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:648166-648317:1:exon

position:648166:1
position: 648166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648317:1
position: 648317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:648798-648906:1:exon

position:648798:1
position: 648798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648906:1
position: 648906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:649208-649322:1:exon

position:649208:1
position: 649208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649322:1
position: 649322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:649833-649934:1:exon

position:649833:1
position: 649833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITGA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: ITGA5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: integrin alpha-5
translation: MSPRGGQSTTAPGPPVMTAPPSTLTTSEPAPMTSGATAQRPPTPVEFKSLQWFGATVRAHNASILACAPLYSWSPPKEEGGGREPVGTCFLSIGNFSKFVEYAPCRSDLNSAAGQGYCQGGFSAEFTQTGRVLLGGPGSYFWQGQVMSATQEQITASSYPEYFIQEVAGQLQTRQAAPTHDDSYMGYSVAVGEFSGDTTQDFVAGVPKGNLTYGYVTILNGTNMKSLYNFSGEQMAAYFGYAVAATDVNNDGLADLLVGAPLFMARTGEGRVQEVGRVYLYLQLPGGALPTPAMALTGPQEFGRFGSAIAPLGDLDLDGFNDVAVGAPLGTEGRQGLVYIYSGRGAGLHPQPAQVLRGHWAPGRHPDFFGAALRGATDLDGNGYPDLLVGAFGVDTAVVYRGRPIVHASAMLSVFPTMFNPEERSCVLEGTGLHVPCINVSFCLNASGRHLPGPIGFTVELSMDGAKAGGGRRALFLPGGQPTRTLTLPVPNGAGTRCHTMAVFLRNESEFRDKLSPIAVGLSFALDPHAPPDTHGLHPVLAAHTHTRLETKAHIQLDCGEDNICVPDLQLEASADRHAVYLGDRNSLNLTFNARNQGEGGAYEAELHVRPPPHAQYTGVLRPHGNFSALSCELGVGNNSSPLICDLGNPMKAGASIWGGLRFTVPHLSDSSKSIRFELQIRSKNANNSQSEVVTVPLEVRAATRLSAFGVSRPDVVIVPEGGWTPEQPPRQLQDLGPPVEHIYEVVNEGPSAISHGTLELSCPXSYRGHPLLYVTGHSGPRNCSTSHPLDNLRLAEQEQSPEAHGPAAPGHRGRGHQGHAGQQPPCTPLHPGVPRGRVLPPELPHGGGWRSSSG
SIO_010081: ITGA5
subclass of: SO_0000673
so part of: ITGA5
location: join(640235..640315,640778..640891,641002..641128,641539..641600,641868..641913,642136..642261,642753..642797,642895..642938,643136..643192,643336..643388,643503..643711,644115..644306,644744..644789,644858..644965,645415..645470,645585..645736,645818..645955,646376..646443,646523..646673,646995..647087,647166..647245,647659..647739,647826..647932,648166..648317,648798..648906,649208..649278)
location: region:640235-649278:1
so has part: feature:640235-640315:1:exon
so has part: feature:640778-640891:1:exon
so has part: feature:641002-641128:1:exon
so has part: feature:641539-641600:1:exon
so has part: feature:641868-641913:1:exon
so has part: feature:642136-642261:1:exon
so has part: feature:642753-642797:1:exon
so has part: feature:642895-642938:1:exon
so has part: feature:643136-643192:1:exon
so has part: feature:643336-643388:1:exon
so has part: feature:643503-643711:1:exon
so has part: feature:644115-644306:1:exon
so has part: feature:644744-644789:1:exon
so has part: feature:644858-644965:1:exon
so has part: feature:645415-645470:1:exon
so has part: feature:645585-645736:1:exon
so has part: feature:645818-645955:1:exon
so has part: feature:646376-646443:1:exon
so has part: feature:646523-646673:1:exon
so has part: feature:646995-647087:1:exon
so has part: feature:647166-647245:1:exon
so has part: feature:647659-647739:1:exon
so has part: feature:647826-647932:1:exon
so has part: feature:648166-648317:1:exon
so has part: feature:648798-648906:1:exon
so has part: feature:649208-649278:1:exon

XP_055648304.1
type: Protein
SIO_000068: ncbiprotein

position:640235:1
position: 640235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649278:1
position: 649278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640235-640315:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:640778-640891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641002-641128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641539-641600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641868-641913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642136-642261:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642753-642797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:642895-642938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:643136-643192:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:643336-643388:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:643503-643711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:644115-644306:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644744-644789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:644858-644965:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:645415-645470:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:645585-645736:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:645818-645955:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:646376-646443:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:646523-646673:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:646995-647087:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:647166-647245:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:647659-647739:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:647826-647932:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:648166-648317:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:648798-648906:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:649208-649278:1:exon

ZNF385A
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: ZNF385A
note: zinc finger protein 385A; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 652565..656775
location: region:652565-656775:1
so has part: feature:652565-656775:1:exon
subclass of: SO_0000010

106112207
type: Gene
SIO_000068: ncbigene

position:652565:1
position: 652565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656775:1
position: 656775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652565-656775:1:exon

ZNF385A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: ZNF385A
product: zinc finger protein 385A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_055792404.1
SIO_010081: ZNF385A
subclass of: SO_0000673
so part of: ZNF385A
location: join(652565..653026,653885..653984,654456..654600,654672..654894,655297..655465,655881..655973,656410..656775)
location: region:652565-656775:1
so has part: feature:652565-653026:1:exon
so has part: feature:653885-653984:1:exon
so has part: feature:654456-654600:1:exon
so has part: feature:654672-654894:1:exon
so has part: feature:655297-655465:1:exon
so has part: feature:655881-655973:1:exon
so has part: feature:656410-656775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:652565-653026:1:exon

position:653026:1
position: 653026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653885-653984:1:exon

position:653885:1
position: 653885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653984:1
position: 653984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654456-654600:1:exon

position:654456:1
position: 654456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654600:1
position: 654600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:654672-654894:1:exon

position:654672:1
position: 654672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654894:1
position: 654894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:655297-655465:1:exon

position:655297:1
position: 655297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655465:1
position: 655465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:655881-655973:1:exon

position:655881:1
position: 655881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655973:1
position: 655973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:656410-656775:1:exon

position:656410:1
position: 656410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF385A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: ZNF385A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 385A
translation: MLRAPGPLGAPPGRLLLPDAAAALRLLPPLPAMEPVPKAVLGAALGKPRRPVIACSVCQIRFNSESQAAAHYQGNRHARRLKGLEATRARRGGDTTGTPSPMPTAAGEMPDSTAGDQPPAPAAPGAPRPPSPPVPPPAAAAEATGGAGGGRGGSEEEEEKAKAKRLLYCALCKVAVNSLSQLEAHNKGTKHKTLVEARSGLGPIRAFPRLGXGLRGTPPAEAPERSFHCQICNVRLNSELQLKQHISSRRHRDGVAGKPNPLLSRHKKPRTPTELAPLPFHKELPKALAGGGLLPPPLALAAAAAAMAAPPLALRPXPGPPLLPGPPLAPALLRPAPGPLRPAHAPLLFSPY
SIO_010081: ZNF385A
subclass of: SO_0000673
so part of: ZNF385A
location: join(652932..653026,653885..653984,654456..654600,654672..654894,655297..655465,655881..655973,656410..656641)
location: region:652932-656641:1
so has part: feature:652932-653026:1:exon
so has part: feature:653885-653984:1:exon
so has part: feature:654456-654600:1:exon
so has part: feature:654672-654894:1:exon
so has part: feature:655297-655465:1:exon
so has part: feature:655881-655973:1:exon
so has part: feature:656410-656641:1:exon

XP_055648379.1
type: Protein
SIO_000068: ncbiprotein

position:652932:1
position: 652932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656641:1
position: 656641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652932-653026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653885-653984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654456-654600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654672-654894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655297-655465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655881-655973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:656410-656641:1:exon

COPZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: COPZ1
note: COPI coat complex subunit zeta 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(659171..662392)
location: region:659171-662392:-1
so has part: feature:659171-662392:-1:exon
subclass of: SO_0000010

101921785
type: Gene
SIO_000068: ncbigene

position:659171:-1
position: 659171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662392:-1
position: 662392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659171-662392:-1:exon

COPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: COPZ1
product: COPI coat complex subunit zeta 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055791971.1
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: complement(join(659171..659262,659512..659550,659663..659714,659813..659890,660178..660237,660556..660643,660768..660849,661167..661235,662182..662392))
location: region:659171-662392:-1
so has part: feature:662182-662392:-1:exon
so has part: feature:661167-661235:-1:exon
so has part: feature:660768-660849:-1:exon
so has part: feature:660556-660643:-1:exon
so has part: feature:660178-660237:-1:exon
so has part: feature:659813-659890:-1:exon
so has part: feature:659663-659714:-1:exon
so has part: feature:659512-659550:-1:exon
so has part: feature:659171-659262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662182-662392:-1:exon

position:662182:-1
position: 662182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661167-661235:-1:exon

position:661167:-1
position: 661167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661235:-1
position: 661235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:660768-660849:-1:exon

position:660768:-1
position: 660768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660849:-1
position: 660849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:660556-660643:-1:exon

position:660556:-1
position: 660556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660643:-1
position: 660643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:660178-660237:-1:exon

position:660178:-1
position: 660178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660237:-1
position: 660237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:659813-659890:-1:exon

position:659813:-1
position: 659813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659890:-1
position: 659890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:659663-659714:-1:exon

position:659663:-1
position: 659663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659714:-1
position: 659714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:659512-659550:-1:exon

position:659512:-1
position: 659512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659550:-1
position: 659550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:659171-659262:-1:exon

position:659262:-1
position: 659262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: COPZ1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(660231..660233),aa:OTHER)
product: LOW QUALITY PROTEIN: coatomer subunit zeta-1
translation: MEALILEPSLYTVKAVIILDNDGDRLFAKYYDDTYPSAKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSHENSXCLTAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVVLESDPQQVVHRVAVRGEDVPLTEQTVSQVLQSAKEQIKWSLLR
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: complement(join(659215..659262,659512..659550,659663..659714,659813..659890,660178..660237,660556..660643,660768..660849,661167..661235,662182..662199))
location: region:659215-662199:-1
so has part: feature:662182-662199:-1:exon
so has part: feature:661167-661235:-1:exon
so has part: feature:660768-660849:-1:exon
so has part: feature:660556-660643:-1:exon
so has part: feature:660178-660237:-1:exon
so has part: feature:659813-659890:-1:exon
so has part: feature:659663-659714:-1:exon
so has part: feature:659512-659550:-1:exon
so has part: feature:659215-659262:-1:exon

XP_055647946.1
type: Protein
SIO_000068: ncbiprotein

position:659215:-1
position: 659215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662199:-1
position: 662199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662182-662199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661167-661235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660768-660849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660556-660643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660178-660237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659813-659890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659663-659714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659512-659550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:659215-659262:-1:exon

NFE2
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: NFE2
note: nuclear factor, erythroid 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 662773..666600
location: region:662773-666600:1
so has part: feature:662773-666600:1:exon
subclass of: SO_0000010

129782861
type: Gene
SIO_000068: ncbigene

position:662773:1
position: 662773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666600:1
position: 666600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662773-666600:1:exon

NFE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NFE2
product: nuclear factor, erythroid 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055791973.1
SIO_010081: NFE2
subclass of: SO_0000673
so part of: NFE2
location: join(662773..663364,664816..664859,665196..665313,665683..666600)
location: region:662773-666600:1
so has part: feature:662773-663364:1:exon
so has part: feature:664816-664859:1:exon
so has part: feature:665196-665313:1:exon
so has part: feature:665683-666600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662773-663364:1:exon

position:663364:1
position: 663364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664816-664859:1:exon

position:664816:1
position: 664816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664859:1
position: 664859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665196-665313:1:exon

position:665196:1
position: 665196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665313:1
position: 665313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665683-666600:1:exon

position:665683:1
position: 665683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NFE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor NF-E2 45 kDa subunit
translation: MPGGVCALPPHLVPSVASPLSPTAPPCLQCVPLCPPATHTPCPTPGHRRRVPVTAPTPCSPGPSCVPIPVPVSPCTCQAIHVPPFVSPSLQPRASHPAPKSPVLLPPPLLPSRVPVPPPSLSPVSLGRAPTCGCAGGWHCHGLACVPASPRRISVSHGPALSTGHQEAAATAAAPAWGTPRRWRRSGEAGGRGLSLAPPPPGPAEVELTWQEILSLSELQGLDMVADTPIDPSPFCSVPPPSPYTPLPPPHLPTPSPPPPLRTPHSPPPFPTPPLPTSFPAEPPAHPAARRDARRASALALPIGPEAIVNLPVEDFNALLGRARLSGPELALARDIRRRGKNKVAAQKCRRRKLEAIAQLQAELGSLGQERERLLRVRGQAERALGALRRDLAHVSAQVLGALRDGAGNPLPPECFGLRLAPDGELSLESPGLGE
SIO_010081: NFE2
subclass of: SO_0000673
so part of: NFE2
location: join(662867..663364,664816..664859,665196..665313,665683..666330)
location: region:662867-666330:1
so has part: feature:662867-663364:1:exon
so has part: feature:664816-664859:1:exon
so has part: feature:665196-665313:1:exon
so has part: feature:665683-666330:1:exon

XP_055647948.1
type: Protein
SIO_000068: ncbiprotein

position:662867:1
position: 662867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666330:1
position: 666330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662867-663364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664816-664859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665196-665313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665683-666330:1:exon

HNRNPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HNRNPA1
note: heterogeneous nuclear ribonucleoprotein A1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(667868..673165)
location: region:667868-673165:-1
so has part: feature:667868-673165:-1:exon
subclass of: SO_0000010

101923389
type: Gene
SIO_000068: ncbigene

position:667868:-1
position: 667868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673165:-1
position: 673165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667868-673165:-1:exon

HNRNPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HNRNPA1
product: heterogeneous nuclear ribonucleoprotein A1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon
transcript id: XM_055791964.1
SIO_010081: HNRNPA1
subclass of: SO_0000673
so part of: HNRNPA1
location: complement(join(667868..668186,668722..668784,668869..668991,669575..669748,669941..670030,670291..670383,670492..670584,670669..670879,671008..671154,671388..671504,673007..673165))
location: region:667868-673165:-1
so has part: feature:673007-673165:-1:exon
so has part: feature:671388-671504:-1:exon
so has part: feature:671008-671154:-1:exon
so has part: feature:670669-670879:-1:exon
so has part: feature:670492-670584:-1:exon
so has part: feature:670291-670383:-1:exon
so has part: feature:669941-670030:-1:exon
so has part: feature:669575-669748:-1:exon
so has part: feature:668869-668991:-1:exon
so has part: feature:668722-668784:-1:exon
so has part: feature:667868-668186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673007-673165:-1:exon

position:673007:-1
position: 673007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671388-671504:-1:exon

position:671388:-1
position: 671388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671504:-1
position: 671504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:671008-671154:-1:exon

position:671008:-1
position: 671008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671154:-1
position: 671154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:670669-670879:-1:exon

position:670669:-1
position: 670669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670879:-1
position: 670879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670492-670584:-1:exon

position:670492:-1
position: 670492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670584:-1
position: 670584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:670291-670383:-1:exon

position:670291:-1
position: 670291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670383:-1
position: 670383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:669941-670030:-1:exon

position:669941:-1
position: 669941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670030:-1
position: 670030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:669575-669748:-1:exon

position:669575:-1
position: 669575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669748:-1
position: 669748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:668869-668991:-1:exon

position:668869:-1
position: 668869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668991:-1
position: 668991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:668722-668784:-1:exon

position:668722:-1
position: 668722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668784:-1
position: 668784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:667868-668186:-1:exon

position:668186:-1
position: 668186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HNRNPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HNRNPA1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1
translation: MAKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKXIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASASQRGRSGSGNFGGGRGGGFGGNDNFSRGGNFGGRGGFGGSRGGGYGGGGDGYGGGDGYNGFGNDGYGGSGPGYSGGNRGYGGSSTYDGYNNGGGGFGGGSGGRRPARGPALAVRNGLSEAGTGSNFGGGGNYNDFGSYNNQSSNFGPMKGGNFGGRSSGPYGGGGYGSSSGGGSYGGGRRF
SIO_010081: HNRNPA1
subclass of: SO_0000673
so part of: HNRNPA1
location: complement(join(668729..668784,668869..668991,669575..669748,669941..670030,670291..670383,670492..670584,670669..670879,671008..671154,671388..671504,673007..673021))
location: region:668729-673021:-1
so has part: feature:673007-673021:-1:exon
so has part: feature:671388-671504:-1:exon
so has part: feature:671008-671154:-1:exon
so has part: feature:670669-670879:-1:exon
so has part: feature:670492-670584:-1:exon
so has part: feature:670291-670383:-1:exon
so has part: feature:669941-670030:-1:exon
so has part: feature:669575-669748:-1:exon
so has part: feature:668869-668991:-1:exon
so has part: feature:668729-668784:-1:exon

XP_055647939.1
type: Protein
SIO_000068: ncbiprotein

position:668729:-1
position: 668729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673021:-1
position: 673021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673007-673021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671388-671504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671008-671154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670669-670879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670492-670584:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670291-670383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669941-670030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:669575-669748:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668869-668991:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668729-668784:-1:exon

CBX5
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: CBX5
note: chromobox 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 673421..677104
location: region:673421-677104:1
so has part: feature:673421-677104:1:exon
subclass of: SO_0000010

101921615
type: Gene
SIO_000068: ncbigene

position:673421:1
position: 673421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677104:1
position: 677104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673421-677104:1:exon

CBX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: CBX5
product: chromobox 5, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055791970.1
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: join(673421..673636,675380..675535,675615..675801,676248..676345,676452..677104)
location: region:673421-677104:1
so has part: feature:673421-673636:1:exon
so has part: feature:675380-675535:1:exon
so has part: feature:675615-675801:1:exon
so has part: feature:676248-676345:1:exon
so has part: feature:676452-677104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673421-673636:1:exon

position:673636:1
position: 673636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675380-675535:1:exon

position:675380:1
position: 675380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675535:1
position: 675535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675615-675801:1:exon

position:675615:1
position: 675615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675801:1
position: 675801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:676248-676345:1:exon

position:676248:1
position: 676248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676345:1
position: 676345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:676452-677104:1:exon

position:676452:1
position: 676452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: CBX5
product: chromobox 5, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055791968.1
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: join(673422..673631,675380..675535,675615..675801,676248..676345,676452..677104)
location: region:673422-677104:1
so has part: feature:673422-673631:1:exon
so has part: feature:675380-675535:1:exon
so has part: feature:675615-675801:1:exon
so has part: feature:676248-676345:1:exon
so has part: feature:676452-677104:1:exon

position:673422:1
position: 673422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673422-673631:1:exon

position:673631:1
position: 673631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675380-675535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675615-675801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676248-676345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676452-677104:1:exon

CBX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: CBX5
product: chromobox 5, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055791967.1
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: join(673425..673622,675380..675535,675615..675801,676248..676345,676452..677104)
location: region:673425-677104:1
so has part: feature:673425-673622:1:exon
so has part: feature:675380-675535:1:exon
so has part: feature:675615-675801:1:exon
so has part: feature:676248-676345:1:exon
so has part: feature:676452-677104:1:exon

position:673425:1
position: 673425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673425-673622:1:exon

position:673622:1
position: 673622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675380-675535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675615-675801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676248-676345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676452-677104:1:exon

CBX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: CBX5
product: chromobox 5, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055791969.1
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: join(673705..673848,675380..675535,675615..675801,676248..676345,676452..677104)
location: region:673705-677104:1
so has part: feature:673705-673848:1:exon
so has part: feature:675380-675535:1:exon
so has part: feature:675615-675801:1:exon
so has part: feature:676248-676345:1:exon
so has part: feature:676452-677104:1:exon

position:673705:1
position: 673705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673705-673848:1:exon

position:673848:1
position: 673848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675380-675535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675615-675801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676248-676345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676452-677104:1:exon

CBX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: CBX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 5
translation: MGKRSKRPADSSSSGDEEEYVVEKVLDRRVVKGQAEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMRKYKKMKEGDGNKPREKAEGAKRKGGLPASGEDVKAKKKRESNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANLKCPQIVIAFYEERLTWHAYPEDTDSKERETPRS
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: join(675399..675535,675615..675801,676248..676345,676452..676602)
location: region:675399-676602:1
so has part: feature:675399-675535:1:exon
so has part: feature:675615-675801:1:exon
so has part: feature:676248-676345:1:exon
so has part: feature:676452-676602:1:exon

XP_055647942.1
type: Protein
SIO_000068: ncbiprotein

position:675399:1
position: 675399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676602:1
position: 676602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675399-675535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675615-675801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676248-676345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676452-676602:1:exon

CBX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: CBX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 5
translation: MGKRSKRPADSSSSGDEEEYVVEKVLDRRVVKGQAEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMRKYKKMKEGDGNKPREKAEGAKRKGGLPASGEDVKAKKKRESNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANLKCPQIVIAFYEERLTWHAYPEDTDSKERETPRS
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: join(675399..675535,675615..675801,676248..676345,676452..676602)
location: region:675399-676602:1
so has part: feature:675399-675535:1:exon
so has part: feature:675615-675801:1:exon
so has part: feature:676248-676345:1:exon
so has part: feature:676452-676602:1:exon

XP_055647943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675399-675535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675615-675801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676248-676345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676452-676602:1:exon

CBX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: CBX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 5
translation: MGKRSKRPADSSSSGDEEEYVVEKVLDRRVVKGQAEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMRKYKKMKEGDGNKPREKAEGAKRKGGLPASGEDVKAKKKRESNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANLKCPQIVIAFYEERLTWHAYPEDTDSKERETPRS
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: join(675399..675535,675615..675801,676248..676345,676452..676602)
location: region:675399-676602:1
so has part: feature:675399-675535:1:exon
so has part: feature:675615-675801:1:exon
so has part: feature:676248-676345:1:exon
so has part: feature:676452-676602:1:exon

XP_055647944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675399-675535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675615-675801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676248-676345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676452-676602:1:exon

CBX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: CBX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 5
translation: MGKRSKRPADSSSSGDEEEYVVEKVLDRRVVKGQAEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMRKYKKMKEGDGNKPREKAEGAKRKGGLPASGEDVKAKKKRESNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANLKCPQIVIAFYEERLTWHAYPEDTDSKERETPRS
SIO_010081: CBX5
subclass of: SO_0000673
so part of: CBX5
location: join(675399..675535,675615..675801,676248..676345,676452..676602)
location: region:675399-676602:1
so has part: feature:675399-675535:1:exon
so has part: feature:675615-675801:1:exon
so has part: feature:676248-676345:1:exon
so has part: feature:676452-676602:1:exon

XP_055647945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675399-675535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675615-675801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676248-676345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676452-676602:1:exon

SMUG1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: SMUG1
note: single-strand-selective monofunctional uracil-DNA glycosylase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 677499..680658
location: region:677499-680658:1
so has part: feature:677499-680658:1:exon
subclass of: SO_0000010

101923215
type: Gene
SIO_000068: ncbigene

position:677499:1
position: 677499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680658:1
position: 680658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677499-680658:1:exon

SMUG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: SMUG1
product: single-strand-selective monofunctional uracil-DNA glycosylase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055791965.1
SIO_010081: SMUG1
subclass of: SO_0000673
so part of: SMUG1
location: join(677499..678045,678763..679071,679380..680658)
location: region:677499-680658:1
so has part: feature:677499-678045:1:exon
so has part: feature:678763-679071:1:exon
so has part: feature:679380-680658:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677499-678045:1:exon

position:678045:1
position: 678045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678763-679071:1:exon

position:678763:1
position: 678763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679071:1
position: 679071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:679380-680658:1:exon

position:679380:1
position: 679380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMUG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: SMUG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single-strand selective monofunctional uracil DNA glycosylase isoform X1
translation: MEEREAEAAGTVTEPAAVAKAGEDEGGLAGRFLRLEREQSVLLQALPPFGEPVSHVYHPLDYAWEPHCDFVRRYCCTPKRVLFLGMNPGPFGMAQTGVPFGEAWHVREWLQVAGGVKKPPSEHPKRPVLGLACQRAEVSGARFWGLVRTLCPDPHLFFRHCFVHNHCPLLFLASSGRNLPPTELPPAQRDRLMVLCDRMLARAVGLLGVGLVVGIGRYAERRARRALAASGLAVRVEGLPHPSPRNPRANRGWEELAKARLGELGVLELLEEGVRRR
SIO_010081: SMUG1
subclass of: SO_0000673
so part of: SMUG1
location: join(678781..679071,679380..679922)
location: region:678781-679922:1
so has part: feature:678781-679071:1:exon
so has part: feature:679380-679922:1:exon

XP_055647940.1
type: Protein
SIO_000068: ncbiprotein

position:678781:1
position: 678781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679922:1
position: 679922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678781-679071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679380-679922:1:exon

SMUG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: SMUG1
product: single-strand-selective monofunctional uracil-DNA glycosylase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027780569.2
SIO_010081: SMUG1
subclass of: SO_0000673
so part of: SMUG1
location: join(678928..679210,679380..680658)
location: region:678928-680658:1
so has part: feature:678928-679210:1:exon
so has part: feature:679380-680658:1:exon

position:678928:1
position: 678928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678928-679210:1:exon

position:679210:1
position: 679210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:679380-680658:1:exon

SMUG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: SMUG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single-strand selective monofunctional uracil DNA glycosylase isoform X2
translation: MGPQVGETEAQECPGFPVPIPVGHLVPFGEAWHVREWLQVAGGVKKPPSEHPKRPVLGLACQRAEVSGARFWGLVRTLCPDPHLFFRHCFVHNHCPLLFLASSGRNLPPTELPPAQRDRLMVLCDRMLARAVGLLGVGLVVGIGRYAERRARRALAASGLAVRVEGLPHPSPRNPRANRGWEELAKARLGELGVLELLEEGVRRR
SIO_010081: SMUG1
subclass of: SO_0000673
so part of: SMUG1
location: join(679136..679210,679380..679922)
location: region:679136-679922:1
so has part: feature:679136-679210:1:exon
so has part: feature:679380-679922:1:exon

XP_027636370.1
type: Protein
SIO_000068: ncbiprotein

position:679136:1
position: 679136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679136-679210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679380-679922:1:exon

HOXC5
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HOXC5
note: homeobox C5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(732572..753306)
location: region:732572-753306:-1
so has part: feature:732572-753306:-1:exon
subclass of: SO_0000010

101921447
type: Gene
SIO_000068: ncbigene

position:732572:-1
position: 732572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753306:-1
position: 753306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:732572-753306:-1:exon

HOXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HOXC5
product: homeobox C5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_055792383.1
SIO_010081: HOXC5
subclass of: SO_0000673
so part of: HOXC5
location: complement(join(732572..733175,751901..752116,752852..753306))
location: region:732572-753306:-1
so has part: feature:752852-753306:-1:exon
so has part: feature:751901-752116:-1:exon
so has part: feature:732572-733175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752852-753306:-1:exon

position:752852:-1
position: 752852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751901-752116:-1:exon

position:751901:-1
position: 751901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752116:-1
position: 752116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:732572-733175:-1:exon

position:733175:-1
position: 733175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HOXC5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-C5
translation: MSSYVANSFYKQSPTVPAYAMQSYGNYGSVPEVQSPRYRYSGLDLSITLPSSGXASSLSGLDMSATPRANPERPSCTVMGSSGHPLARDDQAXLNPGIYSQKSANTALEERSKSSSEIKAEPVANSTTRRPQLQQQQPPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKKQRGSLVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRAATAAAAGASTAPAAPASTAAGEELPSAAAQDPRTEDITRL
SIO_010081: HOXC5
subclass of: SO_0000673
so part of: HOXC5
location: complement(join(732820..733175,751901..752116,752852..753306))
location: region:732820-753306:-1
so has part: feature:752852-753306:-1:exon
so has part: feature:751901-752116:-1:exon
so has part: feature:732820-733175:-1:exon

XP_055648358.1
type: Protein
SIO_000068: ncbiprotein

position:732820:-1
position: 732820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752852-753306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751901-752116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:732820-733175:-1:exon

HOXC6
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HOXC6
note: homeobox C6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(756631..758447)
location: region:756631-758447:-1
so has part: feature:756631-758447:-1:exon
subclass of: SO_0000010

101922869
type: Gene
SIO_000068: ncbigene

position:756631:-1
position: 756631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758447:-1
position: 758447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756631-758447:-1:exon

HOXC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HOXC6
product: homeobox C6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_005233077.3
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(756631..756944,757732..758447))
location: region:756631-758447:-1
so has part: feature:757732-758447:-1:exon
so has part: feature:756631-756944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757732-758447:-1:exon

position:757732:-1
position: 757732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:756631-756944:-1:exon

position:756944:-1
position: 756944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HOXC6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-C6
translation: MNSYFTNPSLSCHLTSGQEVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSSPFYSPQDNVVFSSSRGPYDYGSNAFYQEKDMLSSCRQNSMGHNTQTSIAQDFTSDQNRNTSQEQKTSIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLSSTLSGAGGGAAAAAADSLAKEEKREETEEEKQKE
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(756631..756944,757732..758134))
location: region:756631-758134:-1
so has part: feature:757732-758134:-1:exon
so has part: feature:756631-756944:-1:exon

XP_005233134.2
type: Protein
SIO_000068: ncbiprotein

position:758134:-1
position: 758134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757732-758134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:756631-756944:-1:exon

HOXC9
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HOXC9
note: homeobox C9; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(785824..788730)
location: region:785824-788730:-1
so has part: feature:785824-788730:-1:exon
subclass of: SO_0000010

101914610
type: Gene
SIO_000068: ncbigene

position:785824:-1
position: 785824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788730:-1
position: 788730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785824-788730:-1:exon

HOXC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HOXC9
product: homeobox C9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_005233116.2
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: complement(join(785824..786162,788156..788730))
location: region:785824-788730:-1
so has part: feature:788156-788730:-1:exon
so has part: feature:785824-786162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788156-788730:-1:exon

position:788156:-1
position: 788156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:785824-786162:-1:exon

position:786162:-1
position: 786162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C9
translation: MNVKEGGTMSASGPISNYYVDSLISHENDELLASRFPSTASHPAAARPSGLVPDCADFPSCSFAPKPAVFTTSWAPVHSQSSVGYHPYAPQAPVGAEPRYMRTWLEPLAGAVSFPAFAPGARPYGLKPDAFPGRRPECGPADGRGYADYMYAAPGELRDRAAQTIPSPESEAIASSKHKEEKHELDPNNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEKTDKEQQ
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: complement(join(785918..786162,788156..788717))
location: region:785918-788717:-1
so has part: feature:788156-788717:-1:exon
so has part: feature:785918-786162:-1:exon

XP_005233173.1
type: Protein
SIO_000068: ncbiprotein

position:785918:-1
position: 785918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788717:-1
position: 788717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788156-788717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785918-786162:-1:exon

HOXC10
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HOXC10
note: homeobox C10; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(799164..803931)
location: region:799164-803931:-1
so has part: feature:799164-803931:-1:exon
subclass of: SO_0000010

101914437
type: Gene
SIO_000068: ncbigene

position:799164:-1
position: 799164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803931:-1
position: 803931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799164-803931:-1:exon

HOXC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HOXC10
product: homeobox C10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 Proteins
transcript id: XM_005233115.3
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: complement(join(799164..800136,803122..803931))
location: region:799164-803931:-1
so has part: feature:803122-803931:-1:exon
so has part: feature:799164-800136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803122-803931:-1:exon

position:803122:-1
position: 803122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:799164-800136:-1:exon

position:800136:-1
position: 800136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C10
translation: MSCPNNVTSNSFLMDSLAGTCRGENYSSSQGMYMQPGSDFSCGVMRNCGIIPSLSKRDEVNSATLSLSTYPSYLSQLDTWCDPKNTYRIEQPVARQLPSCSFPTNVKEENVCCMYNADKRAKNATETALYPNQMPESCLNDHEVPVPSYYRASQGYPSMEKTSNCSNPNEFEASFESRASLNPRNEHLEPAPPPPPPPPPPVAKVSFPENTKTDNTQNTSTNEIKTEKSAPAPKISPSEAEKELNKNTDTSTDNSDNEAKEDIKAENTTGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRENRIRELTSNFNFT
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: complement(join(799859..800136,803122..803902))
location: region:799859-803902:-1
so has part: feature:803122-803902:-1:exon
so has part: feature:799859-800136:-1:exon

XP_005233172.1
type: Protein
SIO_000068: ncbiprotein

position:799859:-1
position: 799859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803902:-1
position: 803902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803122-803902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:799859-800136:-1:exon

HOXC11
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HOXC11
note: homeobox C11; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(815012..817289)
location: region:815012-817289:-1
so has part: feature:815012-817289:-1:exon
subclass of: SO_0000010

101914261
type: Gene
SIO_000068: ncbigene

position:815012:-1
position: 815012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817289:-1
position: 817289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815012-817289:-1:exon

HOXC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HOXC11
product: homeobox C11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_005233114.1
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: complement(join(815012..815244,816614..817289))
location: region:815012-817289:-1
so has part: feature:816614-817289:-1:exon
so has part: feature:815012-815244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:816614-817289:-1:exon

position:816614:-1
position: 816614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815012-815244:-1:exon

position:815244:-1
position: 815244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HOXC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C11
translation: MFNSVNLGNFCSQSRKERSAEFGERAGCASNLYLPSCTYYVPEFSTVSSFLPQAPSRQISYPYSTNLSQVQPVREVSYGLDPSSKWHHRSNYASCYSAEDLMHRECIPPSTMTEMLMKNESVYSHHHPSSNHPASTGFYTSMNKNTVLPQGFDRFFENAYCGAENPTETCLQKGEGKVEAESQPHALSSRGEQGIDPEDEEENTNPGSSASSSSVTKEGSKNSNSSAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSGNPLL
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: complement(join(815012..815244,816614..817289))
location: region:815012-817289:-1
so has part: feature:816614-817289:-1:exon
so has part: feature:815012-815244:-1:exon

XP_005233171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:816614-817289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815012-815244:-1:exon

HOXC12
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HOXC12
note: homeobox C12; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(835262..836842)
location: region:835262-836842:-1
so has part: feature:835262-836842:-1:exon
subclass of: SO_0000010

101914090
type: Gene
SIO_000068: ncbigene

position:835262:-1
position: 835262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836842:-1
position: 836842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835262-836842:-1:exon

HOXC12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HOXC12
product: homeobox C12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_005233113.2
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: complement(join(835262..835500,836278..836842))
location: region:835262-836842:-1
so has part: feature:836278-836842:-1:exon
so has part: feature:835262-835500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:836278-836842:-1:exon

position:836278:-1
position: 836278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835262-835500:-1:exon

position:835500:-1
position: 835500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HOXC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C12
translation: MGEHNLLNPGFVGPLVNIHTGDTFYFPNFRASGGQLPGLPSLSYPRRDNVCSLPWASSEPCNGYPQPYLSSPVSINPSFGRACDLARVEESKCYYRETCSESTGLKREERGRDSALLPLESSLPTGMGGNFSKYDYPASEAVPHDPPSCQSLESDSSSSLLNEGNKGTSGEAGGLVSPLNQGSTLGNGGAPWYPMHTRSRKKRKPYSKLQLAELEGEFMVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLREQALSFF
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: complement(join(835262..835500,836278..836842))
location: region:835262-836842:-1
so has part: feature:836278-836842:-1:exon
so has part: feature:835262-835500:-1:exon

XP_005233170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:836278-836842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835262-835500:-1:exon

HOXC13
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: HOXC13
note: homeobox C13; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(846782..849890)
location: region:846782-849890:-1
so has part: feature:846782-849890:-1:exon
subclass of: SO_0000010

101922233
type: Gene
SIO_000068: ncbigene

position:846782:-1
position: 846782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849890:-1
position: 849890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846782-849890:-1:exon

HOXC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: HOXC13
product: homeobox C13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins
transcript id: XM_005233156.2
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: complement(join(846782..847038,849260..849890))
location: region:846782-849890:-1
so has part: feature:849260-849890:-1:exon
so has part: feature:846782-847038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:849260-849890:-1:exon

position:849260:-1
position: 849260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:846782-847038:-1:exon

position:847038:-1
position: 847038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: HOXC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C13
translation: MTAPLGLPPRWPDGLACRCEDAPREKNRMEGLGHCREMMPHAGLAVPTAPPPPPPQGAAYAELAAAEPPRQCPSGTASSAALGYGYPFGGGYYGCRLSHSHGVNLQQKPCAYHPGEKYPEAGGPLPGEELPSRAKEFAFYPGFPSSYQAVPGYLDVSVVPGLGGHPEPRHDALLPMEGYQHWALSNGWDGQVYCSKEQSQSAHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTKIQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKKVVSKSKTAHLHAT
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: complement(join(846782..847038,849260..849890))
location: region:846782-849890:-1
so has part: feature:849260-849890:-1:exon
so has part: feature:846782-847038:-1:exon

XP_005233213.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:849260-849890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:846782-847038:-1:exon

ATP5MC2
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: ATP5MC2
note: ATP synthase membrane subunit c locus 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 923589..925766
location: region:923589-925766:1
so has part: feature:923589-925766:1:exon
subclass of: SO_0000010

114010987
type: Gene
SIO_000068: ncbigene

position:923589:1
position: 923589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925766:1
position: 925766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923589-925766:1:exon

ATP5MC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: ATP5MC2
product: ATP synthase membrane subunit c locus 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792456.1
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: join(923589..923679,924415..924488,925025..925099,925280..925440,925524..925766)
location: region:923589-925766:1
so has part: feature:923589-923679:1:exon
so has part: feature:924415-924488:1:exon
so has part: feature:925025-925099:1:exon
so has part: feature:925280-925440:1:exon
so has part: feature:925524-925766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923589-923679:1:exon

position:923679:1
position: 923679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924415-924488:1:exon

position:924415:1
position: 924415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924488:1
position: 924488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:925025-925099:1:exon

position:925025:1
position: 925025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925099:1
position: 925099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:925280-925440:1:exon

position:925280:1
position: 925280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925440:1
position: 925440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:925524-925766:1:exon

position:925524:1
position: 925524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5MC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: ATP5MC2
product: ATP synthase membrane subunit c locus 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792457.1
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: join(923616..923670,924415..924488,925025..925099,925280..925440,925524..925766)
location: region:923616-925766:1
so has part: feature:923616-923670:1:exon
so has part: feature:924415-924488:1:exon
so has part: feature:925025-925099:1:exon
so has part: feature:925280-925440:1:exon
so has part: feature:925524-925766:1:exon

position:923616:1
position: 923616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923616-923670:1:exon

position:923670:1
position: 923670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924415-924488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925025-925099:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:925280-925440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:925524-925766:1:exon

ATP5MC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: ATP5MC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C2, mitochondrial
translation: MYACAKFVSTPALVRSSRVLSQPLSASMLSSPEARTEKAHLGAHRAIQTSTAHRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: join(924450..924488,925025..925099,925280..925440,925524..925638)
location: region:924450-925638:1
so has part: feature:924450-924488:1:exon
so has part: feature:925025-925099:1:exon
so has part: feature:925280-925440:1:exon
so has part: feature:925524-925638:1:exon

XP_055648431.1
type: Protein
SIO_000068: ncbiprotein

position:924450:1
position: 924450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925638:1
position: 925638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924450-924488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:925025-925099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925280-925440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:925524-925638:1:exon

ATP5MC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: ATP5MC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C2, mitochondrial
translation: MYACAKFVSTPALVRSSRVLSQPLSASMLSSPEARTEKAHLGAHRAIQTSTAHRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: join(924450..924488,925025..925099,925280..925440,925524..925638)
location: region:924450-925638:1
so has part: feature:924450-924488:1:exon
so has part: feature:925025-925099:1:exon
so has part: feature:925280-925440:1:exon
so has part: feature:925524-925638:1:exon

XP_055648432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:924450-924488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:925025-925099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925280-925440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:925524-925638:1:exon

LOC101913823
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: LOC101913823
note: cyclic AMP-dependent transcription factor ATF-7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926335..996056
location: region:926335-996056:1
so has part: feature:926335-996056:1:exon
subclass of: SO_0000010

101913823
type: Gene
SIO_000068: ncbigene

position:926335:1
position: 926335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996056:1
position: 996056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926335-996056:1:exon

LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792035.1
SIO_010081: LOC101913823
subclass of: SO_0000673
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LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792040.1
SIO_010081: LOC101913823
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LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792034.1
SIO_010081: LOC101913823
subclass of: SO_0000673
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LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792037.1
SIO_010081: LOC101913823
subclass of: SO_0000673
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LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792039.1
SIO_010081: LOC101913823
subclass of: SO_0000673
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urn:…
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LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792038.1
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
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LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_055792043.1
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
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urn:…
SIO_000300: 10
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:987618-987734:1:exon

LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792042.1
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(926452..926472,947331..947399,963466..963726,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..996056)
location: region:926452-996056:1
so has part: feature:926452-926472:1:exon
so has part: feature:947331-947399:1:exon
so has part: feature:963466-963726:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-996056:1:exon

position:926452:1
position: 926452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926452-926472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:947331-947399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963466-963726:1:exon

position:963466:1
position: 963466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963726:1
position: 963726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:990451-996056:1:exon

LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_027780633.2
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(945081..945370,947331..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..996056)
location: region:945081-996056:1
so has part: feature:945081-945370:1:exon
so has part: feature:947331-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-996056:1:exon

position:945081:1
position: 945081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945081-945370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:947331-947399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990451-996056:1:exon

LOC101913823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: LOC101913823
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792041.1
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(945322..945370,947331..947399,963466..963726,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..996056)
location: region:945322-996056:1
so has part: feature:945322-945370:1:exon
so has part: feature:947331-947399:1:exon
so has part: feature:963466-963726:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-996056:1:exon

position:945322:1
position: 945322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945322-945370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:947331-947399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963466-963726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:990451-996056:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X1
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(947352..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..990671)
location: region:947352-990671:1
so has part: feature:947352-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-990671:1:exon

XP_027636434.1
type: Protein
SIO_000068: ncbiprotein

position:947352:1
position: 947352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990671:1
position: 990671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947352-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990451-990671:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X1
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(947352..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..990671)
location: region:947352-990671:1
so has part: feature:947352-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-990671:1:exon

XP_055648009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947352-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990451-990671:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X1
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(947352..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..990671)
location: region:947352-990671:1
so has part: feature:947352-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-990671:1:exon

XP_055648010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947352-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990451-990671:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X1
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(947352..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..990671)
location: region:947352-990671:1
so has part: feature:947352-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-990671:1:exon

XP_055648012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947352-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990451-990671:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X1
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(947352..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..990671)
location: region:947352-990671:1
so has part: feature:947352-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-990671:1:exon

XP_055648013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947352-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990451-990671:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X1
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(947352..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..990671)
location: region:947352-990671:1
so has part: feature:947352-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-990671:1:exon

XP_055648014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947352-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990451-990671:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X2
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(947352..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990454..990671)
location: region:947352-990671:1
so has part: feature:947352-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990454-990671:1:exon

XP_055648015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947352-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990454-990671:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X4
translation: MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLGE
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(947352..947399,972728..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987734)
location: region:947352-987734:1
so has part: feature:947352-947399:1:exon
so has part: feature:972728-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987734:1:exon

XP_055648018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947352-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987618-987734:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X3
translation: MTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(972776..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..990671)
location: region:972776-990671:1
so has part: feature:972776-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-990671:1:exon

XP_055648016.1
type: Protein
SIO_000068: ncbiprotein

position:972776:1
position: 972776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972776-972824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:990451-990671:1:exon

LOC101913823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: LOC101913823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7 isoform X3
translation: MTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKATEDDEKKSAGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASNPQSPQNKEKEITSKPVIISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLAESPKESSEPTGSPAPVIQHSSVTASPNGLSVRSAAEAVATSVLTQMASQRTELSMPIPSHVIMAPQSQSAGR
SIO_010081: LOC101913823
subclass of: SO_0000673
so part of: LOC101913823
location: join(972776..972824,975942..976060,978717..978851,979445..979602,982160..982259,983487..983600,984716..984862,986150..986347,987618..987726,990451..990671)
location: region:972776-990671:1
so has part: feature:972776-972824:1:exon
so has part: feature:975942-976060:1:exon
so has part: feature:978717-978851:1:exon
so has part: feature:979445-979602:1:exon
so has part: feature:982160-982259:1:exon
so has part: feature:983487-983600:1:exon
so has part: feature:984716-984862:1:exon
so has part: feature:986150-986347:1:exon
so has part: feature:987618-987726:1:exon
so has part: feature:990451-990671:1:exon

XP_055648017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972776-972824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:975942-976060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978717-978851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979445-979602:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:982160-982259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:983487-983600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:984716-984862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986150-986347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987618-987726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:990451-990671:1:exon

LOC129782867
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: LOC129782867
note: uncharacterized LOC129782867; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(995606..997607)
location: region:995606-997607:-1
so has part: feature:995606-997607:-1:exon
subclass of: SO_0000011

129782867
type: Gene
SIO_000068: ncbigene

position:995606:-1
position: 995606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997607:-1
position: 997607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995606-997607:-1:exon

LOC129782867
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8954
nc RNA class: lncRNA
gene: LOC129782867
product: uncharacterized LOC129782867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008744987.1
SIO_010081: LOC129782867
subclass of: SO_0000673
so part of: LOC129782867
location: complement(join(995606..995738,996051..996160,997437..997607))
location: region:995606-997607:-1
so has part: feature:997437-997607:-1:exon
so has part: feature:996051-996160:-1:exon
so has part: feature:995606-995738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997437-997607:-1:exon

position:997437:-1
position: 997437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:996051-996160:-1:exon

position:996051:-1
position: 996051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996160:-1
position: 996160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:995606-995738:-1:exon

position:995738:-1
position: 995738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPFF
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: NPFF
note: neuropeptide FF-amide peptide precursor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 996157..997709
location: region:996157-997709:1
so has part: feature:996157-997709:1:exon
subclass of: SO_0000010

129782866
type: Gene
SIO_000068: ncbigene

position:996157:1
position: 996157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997709:1
position: 997709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996157-997709:1:exon

NPFF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: NPFF
product: neuropeptide FF-amide peptide precursor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_055792044.1
SIO_010081: NPFF
subclass of: SO_0000673
so part of: NPFF
location: join(996157..997183,997601..997709)
location: region:996157-997709:1
so has part: feature:996157-997183:1:exon
so has part: feature:997601-997709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:996157-997183:1:exon

position:997183:1
position: 997183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:997601-997709:1:exon

position:997601:1
position: 997601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPFF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: NPFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-FMRFamide-related neuropeptide FF
translation: MGFISGGGGARTDPRHPPLPPGPPAAARPGHKRRRRGALAGGAMAGPRLLLLLLLAGTPRAARCCPSPGTGPVSPDRGFGLLGEAGAGFVEAGAAVTPPRSPPPQAAAAPPGPPPAAVLGALLRSLQRPGRSPGPLQPQRLGQGGAQARLSPRSWDPPAAPFWTMATPQRFGRRR
SIO_010081: NPFF
subclass of: SO_0000673
so part of: NPFF
location: join(996765..997183,997601..997709)
location: region:996765-997709:1
so has part: feature:996765-997183:1:exon
so has part: feature:997601-997709:1:exon

XP_055648019.1
type: Protein
SIO_000068: ncbiprotein

position:996765:1
position: 996765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996765-997183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:997601-997709:1:exon

TARBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: TARBP2
note: TARBP2 subunit of RISC loading complex; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(997980..1003208)
location: region:997980-1003208:-1
so has part: feature:997980-1003208:-1:exon
subclass of: SO_0000010

101921894
type: Gene
SIO_000068: ncbigene

position:997980:-1
position: 997980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003208:-1
position: 1003208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997980-1003208:-1:exon

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: TARBP2
product: TARBP2 subunit of RISC loading complex, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 5 Proteins
transcript id: XM_055792381.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(997980..998445,998597..998786,999510..999637,999726..999843,1000439..1000511,1001389..1001494,1002248..1002429,1003098..1003208))
location: region:997980-1003208:-1
so has part: feature:1003098-1003208:-1:exon
so has part: feature:1002248-1002429:-1:exon
so has part: feature:1001389-1001494:-1:exon
so has part: feature:1000439-1000511:-1:exon
so has part: feature:999726-999843:-1:exon
so has part: feature:999510-999637:-1:exon
so has part: feature:998597-998786:-1:exon
so has part: feature:997980-998445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003098-1003208:-1:exon

position:1003098:-1
position: 1003098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1002248-1002429:-1:exon

position:1002248:-1
position: 1002248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002429:-1
position: 1002429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1001389-1001494:-1:exon

position:1001389:-1
position: 1001389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001494:-1
position: 1001494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1000439-1000511:-1:exon

position:1000439:-1
position: 1000439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000511:-1
position: 1000511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:999726-999843:-1:exon

position:999726:-1
position: 999726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999843:-1
position: 999843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:999510-999637:-1:exon

position:999510:-1
position: 999510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999637:-1
position: 999637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:998597-998786:-1:exon

position:998597:-1
position: 998597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998786:-1
position: 998786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:997980-998445:-1:exon

position:998445:-1
position: 998445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: TARBP2
product: TARBP2 subunit of RISC loading complex, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 ESTs, 6 Proteins
transcript id: XM_055792380.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(997980..998445,998597..998786,999510..999637,999726..999843,1000439..1000511,1000697..1000780,1001389..1001494,1002248..1002429,1003098..1003208))
location: region:997980-1003208:-1
so has part: feature:1003098-1003208:-1:exon
so has part: feature:1002248-1002429:-1:exon
so has part: feature:1001389-1001494:-1:exon
so has part: feature:1000697-1000780:-1:exon
so has part: feature:1000439-1000511:-1:exon
so has part: feature:999726-999843:-1:exon
so has part: feature:999510-999637:-1:exon
so has part: feature:998597-998786:-1:exon
so has part: feature:997980-998445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003098-1003208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002248-1002429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1001389-1001494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000697-1000780:-1:exon

position:1000697:-1
position: 1000697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000780:-1
position: 1000780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1000439-1000511:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999726-999843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999510-999637:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:998597-998786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:997980-998445:-1:exon

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2 isoform X2
translation: MSEEGAGGGARRSGGFPSPVPSLEQMLAANPGKTPISLLQEYGTRIGKTPGYDLLKAEGQAHQPNFTFRVTVGDISCTGQGPSKKAAKHKAAEVALKLLKGGDMLEPTAPEEPRGTPLEMKTPVSPPQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLVRIHNVPMEPREGSEAEVEEDQFSMACPRLEGLRGRAPGCTWDSLRNSAGEKIVQLRSHPLAPMGAGACALLQELSEEQSFAISYLDIDALSLSGLHQCLVELSTQPATVCHGAAPSRDGARSQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(998288..998445,998597..998786,999510..999637,999726..999843,1000439..1000511,1001389..1001494,1002248..1002429,1003098..1003150))
location: region:998288-1003150:-1
so has part: feature:1003098-1003150:-1:exon
so has part: feature:1002248-1002429:-1:exon
so has part: feature:1001389-1001494:-1:exon
so has part: feature:1000439-1000511:-1:exon
so has part: feature:999726-999843:-1:exon
so has part: feature:999510-999637:-1:exon
so has part: feature:998597-998786:-1:exon
so has part: feature:998288-998445:-1:exon

XP_055648356.1
type: Protein
SIO_000068: ncbiprotein

position:998288:-1
position: 998288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003150:-1
position: 1003150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003098-1003150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002248-1002429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1001389-1001494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000439-1000511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999726-999843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999510-999637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998597-998786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:998288-998445:-1:exon

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2 isoform X1
translation: MSEEGAGGGARRSGGFPSPVPSLEQMLAANPGKTPISLLQEYGTRIGKTPGYDLLKAEGQAHQPNFTFRVTVGDISCTGQGPSKKAAKHKAAEVALKLLKGGDMLEPTAPEEPSSPFPPEPPVELGPTAAPLAPVVPPPLPRGTPLEMKTPVSPPQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLVRIHNVPMEPREGSEAEVEEDQFSMACPRLEGLRGRAPGCTWDSLRNSAGEKIVQLRSHPLAPMGAGACALLQELSEEQSFAISYLDIDALSLSGLHQCLVELSTQPATVCHGAAPSRDGARSQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(998288..998445,998597..998786,999510..999637,999726..999843,1000439..1000511,1000697..1000780,1001389..1001494,1002248..1002429,1003098..1003150))
location: region:998288-1003150:-1
so has part: feature:1003098-1003150:-1:exon
so has part: feature:1002248-1002429:-1:exon
so has part: feature:1001389-1001494:-1:exon
so has part: feature:1000697-1000780:-1:exon
so has part: feature:1000439-1000511:-1:exon
so has part: feature:999726-999843:-1:exon
so has part: feature:999510-999637:-1:exon
so has part: feature:998597-998786:-1:exon
so has part: feature:998288-998445:-1:exon

XP_055648355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1003098-1003150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002248-1002429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1001389-1001494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000697-1000780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1000439-1000511:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999726-999843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999510-999637:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:998597-998786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:998288-998445:-1:exon

MAP3K12
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: MAP3K12
note: mitogen-activated protein kinase kinase kinase 12; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1004666..1015524
location: region:1004666-1015524:1
so has part: feature:1004666-1015524:1:exon
subclass of: SO_0000010

101921723
type: Gene
SIO_000068: ncbigene

position:1004666:1
position: 1004666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015524:1
position: 1015524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004666-1015524:1:exon

MAP3K12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: MAP3K12
product: mitogen-activated protein kinase kinase kinase 12
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins
transcript id: XM_055792445.1
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: join(1004666..1004843,1007167..1007545,1007848..1008031,1009037..1009228,1009932..1010090,1010488..1010647,1011055..1011162,1011747..1011857,1012060..1012176,1012602..1012739,1013205..1013652,1014056..1014126,1014264..1014516,1015361..1015524)
location: region:1004666-1015524:1
so has part: feature:1004666-1004843:1:exon
so has part: feature:1007167-1007545:1:exon
so has part: feature:1007848-1008031:1:exon
so has part: feature:1009037-1009228:1:exon
so has part: feature:1009932-1010090:1:exon
so has part: feature:1010488-1010647:1:exon
so has part: feature:1011055-1011162:1:exon
so has part: feature:1011747-1011857:1:exon
so has part: feature:1012060-1012176:1:exon
so has part: feature:1012602-1012739:1:exon
so has part: feature:1013205-1013652:1:exon
so has part: feature:1014056-1014126:1:exon
so has part: feature:1014264-1014516:1:exon
so has part: feature:1015361-1015524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004666-1004843:1:exon

position:1004843:1
position: 1004843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1007167-1007545:1:exon

position:1007167:1
position: 1007167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007545:1
position: 1007545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1007848-1008031:1:exon

position:1007848:1
position: 1007848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008031:1
position: 1008031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1009037-1009228:1:exon

position:1009037:1
position: 1009037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009228:1
position: 1009228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1009932-1010090:1:exon

position:1009932:1
position: 1009932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010090:1
position: 1010090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1010488-1010647:1:exon

position:1010488:1
position: 1010488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010647:1
position: 1010647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1011055-1011162:1:exon

position:1011055:1
position: 1011055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011162:1
position: 1011162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1011747-1011857:1:exon

position:1011747:1
position: 1011747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011857:1
position: 1011857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1012060-1012176:1:exon

position:1012060:1
position: 1012060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012176:1
position: 1012176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1012602-1012739:1:exon

position:1012602:1
position: 1012602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012739:1
position: 1012739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1013205-1013652:1:exon

position:1013205:1
position: 1013205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013652:1
position: 1013652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1014056-1014126:1:exon

position:1014056:1
position: 1014056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014126:1
position: 1014126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1014264-1014516:1:exon

position:1014264:1
position: 1014264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014516:1
position: 1014516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1015361-1015524:1:exon

position:1015361:1
position: 1015361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: MAP3K12
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 12
translation: MACLHETRTPSPSLALASDGTPEQELTPTQCVLRDVLPPPPAAPAAPAEAWPRRGPPRHPDLGPEGAGPLAAEAAHLRCQAGGGFLEGLFGCLKPVWTMIGKAYAAEHKHPQEDPWEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKETDIKHLRKLKHPNIITFKGVCTQAPCYCIIMEFCAQGQLYEVLRAGRKVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELIDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSGCPDGFKVLLRQCWNSKPRNRPSFXQILLHLDIASADVLSTPQETYFKSQAEWREEVKLHFEKIKSEGTCLHRLEEELINRRREELRHALDIREHYERKLERANNLYMELSALMLQLELKEKELLRREQALEKRYPGLFKPRAPRGLLHGNAVETLIKKRNVPQKLSPHGKRPDILKPEVLLPKLDAAMAQVALPGCPKGPPSPGRSRRAKGRHRKAGPRGGCGEPGPEAGPPRGLAGPPPTTTGPDLLGGTLEAVGAPPATVPDAGPEGATGSQGSPPPQPPVPGEPERESGAGRGGKVGAGQHLTPAALLYRAAVTRGQKRGVSSEEEEGEVDSEVELPLRQRWPPGMSKRQSLSTFSSENFSDGDGDEGHTSEPSHSATPDVGSTNTDERPDDRSEDLLSQGSEIPLDAAAPPEGPGRRHGGLSPKVSEDSDCDSAELDHSGSGEGPPRPTAPPGL
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: join(1007205..1007545,1007848..1008031,1009037..1009228,1009932..1010090,1010488..1010647,1011055..1011162,1011747..1011857,1012060..1012176,1012602..1012739,1013205..1013652,1014056..1014126,1014264..1014516,1015361..1015453)
location: region:1007205-1015453:1
so has part: feature:1007205-1007545:1:exon
so has part: feature:1007848-1008031:1:exon
so has part: feature:1009037-1009228:1:exon
so has part: feature:1009932-1010090:1:exon
so has part: feature:1010488-1010647:1:exon
so has part: feature:1011055-1011162:1:exon
so has part: feature:1011747-1011857:1:exon
so has part: feature:1012060-1012176:1:exon
so has part: feature:1012602-1012739:1:exon
so has part: feature:1013205-1013652:1:exon
so has part: feature:1014056-1014126:1:exon
so has part: feature:1014264-1014516:1:exon
so has part: feature:1015361-1015453:1:exon

XP_055648420.1
type: Protein
SIO_000068: ncbiprotein

position:1007205:1
position: 1007205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015453:1
position: 1015453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007205-1007545:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007848-1008031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009037-1009228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009932-1010090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010488-1010647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011055-1011162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1011747-1011857:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1012060-1012176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1012602-1012739:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1013205-1013652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1014056-1014126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1014264-1014516:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1015361-1015453:1:exon

PCBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: PCBP2
note: poly(rC) binding protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1016244..1032678)
location: region:1016244-1032678:-1
so has part: feature:1016244-1032678:-1:exon
subclass of: SO_0000010

101912962
type: Gene
SIO_000068: ncbigene

position:1016244:-1
position: 1016244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032678:-1
position: 1032678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016244-1032678:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792229.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016244..1016714,1019482..1019651,1020053..1020105,1021157..1021195,1021737..1021809,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029845,1032537..1032678))
location: region:1016244-1032678:-1
so has part: feature:1032537-1032678:-1:exon
so has part: feature:1029710-1029845:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1021157-1021195:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016244-1016714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032537-1032678:-1:exon

position:1032537:-1
position: 1032537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1029710-1029845:-1:exon

position:1029710:-1
position: 1029710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029845:-1
position: 1029845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1029244-1029267:-1:exon

position:1029244:-1
position: 1029244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029267:-1
position: 1029267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029113-1029145:-1:exon

position:1029113:-1
position: 1029113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029145:-1
position: 1029145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1028647-1028763:-1:exon

position:1028647:-1
position: 1028647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028763:-1
position: 1028763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1027057-1027188:-1:exon

position:1027057:-1
position: 1027057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027188:-1
position: 1027188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1026315-1026443:-1:exon

position:1026315:-1
position: 1026315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026443:-1
position: 1026443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1025717-1025791:-1:exon

position:1025717:-1
position: 1025717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025791:-1
position: 1025791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1021737-1021809:-1:exon

position:1021737:-1
position: 1021737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021809:-1
position: 1021809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1021157-1021195:-1:exon

position:1021157:-1
position: 1021157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021195:-1
position: 1021195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1020053-1020105:-1:exon

position:1020053:-1
position: 1020053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020105:-1
position: 1020105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1019482-1019651:-1:exon

position:1019482:-1
position: 1019482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019651:-1
position: 1019651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1016244-1016714:-1:exon

position:1016714:-1
position: 1016714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792228.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016244..1016714,1019482..1019651,1020053..1020105,1021737..1021809,1022934..1022975,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029845,1032537..1032678))
location: region:1016244-1032678:-1
so has part: feature:1032537-1032678:-1:exon
so has part: feature:1029710-1029845:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016244-1016714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032537-1032678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029710-1029845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1022934-1022975:-1:exon

position:1022934:-1
position: 1022934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022975:-1
position: 1022975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1016244-1016714:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792227.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016244..1016714,1019482..1019651,1020053..1020105,1021157..1021195,1021737..1021809,1022934..1022975,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029845,1032537..1032678))
location: region:1016244-1032678:-1
so has part: feature:1032537-1032678:-1:exon
so has part: feature:1029710-1029845:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1021157-1021195:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016244-1016714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032537-1032678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029710-1029845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021157-1021195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1016244-1016714:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792226.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016244..1016714,1019482..1019651,1020053..1020105,1021737..1021809,1022934..1022975,1023985..1024071,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029845,1032537..1032678))
location: region:1016244-1032678:-1
so has part: feature:1032537-1032678:-1:exon
so has part: feature:1029710-1029845:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1023985-1024071:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016244-1016714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032537-1032678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029710-1029845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023985-1024071:-1:exon

position:1023985:-1
position: 1023985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024071:-1
position: 1024071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1016244-1016714:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792224.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016244..1016714,1019482..1019651,1020053..1020105,1021157..1021195,1021737..1021809,1022934..1022975,1023985..1024071,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029845,1032537..1032678))
location: region:1016244-1032678:-1
so has part: feature:1032537-1032678:-1:exon
so has part: feature:1029710-1029845:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1023985-1024071:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1021157-1021195:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016244-1016714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032537-1032678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029710-1029845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023985-1024071:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1021157-1021195:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1016244-1016714:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792223.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016244..1016714,1019482..1019651,1020053..1020105,1021737..1021809,1022934..1022975,1023752..1023817,1023985..1024071,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029845,1032537..1032678))
location: region:1016244-1032678:-1
so has part: feature:1032537-1032678:-1:exon
so has part: feature:1029710-1029845:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1023985-1024071:-1:exon
so has part: feature:1023752-1023817:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016244-1016714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032537-1032678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029710-1029845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023985-1024071:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1023752-1023817:-1:exon

position:1023752:-1
position: 1023752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023817:-1
position: 1023817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1016244-1016714:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792222.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016244..1016714,1019482..1019651,1020053..1020105,1021157..1021195,1021737..1021809,1022934..1022975,1023752..1023817,1023985..1024071,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029845,1032537..1032678))
location: region:1016244-1032678:-1
so has part: feature:1032537-1032678:-1:exon
so has part: feature:1029710-1029845:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1023985-1024071:-1:exon
so has part: feature:1023752-1023817:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1021157-1021195:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016244-1016714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032537-1032678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029710-1029845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023985-1024071:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1023752-1023817:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1021157-1021195:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1016244-1016714:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X7
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016678..1016714,1019482..1019651,1020053..1020105,1021157..1021195,1021737..1021809,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029778))
location: region:1016678-1029778:-1
so has part: feature:1029710-1029778:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1021157-1021195:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016678-1016714:-1:exon

XP_055648204.1
type: Protein
SIO_000068: ncbiprotein

position:1016678:-1
position: 1016678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029778:-1
position: 1029778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029710-1029778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021157-1021195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1016678-1016714:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X6
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016678..1016714,1019482..1019651,1020053..1020105,1021737..1021809,1022934..1022975,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029778))
location: region:1016678-1029778:-1
so has part: feature:1029710-1029778:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016678-1016714:-1:exon

XP_055648203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029710-1029778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1016678-1016714:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X5
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016678..1016714,1019482..1019651,1020053..1020105,1021157..1021195,1021737..1021809,1022934..1022975,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029778))
location: region:1016678-1029778:-1
so has part: feature:1029710-1029778:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1021157-1021195:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016678-1016714:-1:exon

XP_055648202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029710-1029778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1021157-1021195:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1016678-1016714:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X4
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016678..1016714,1019482..1019651,1020053..1020105,1021737..1021809,1022934..1022975,1023985..1024071,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029778))
location: region:1016678-1029778:-1
so has part: feature:1029710-1029778:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1023985-1024071:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016678-1016714:-1:exon

XP_055648201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029710-1029778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023985-1024071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1016678-1016714:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X3
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016678..1016714,1019482..1019651,1020053..1020105,1021157..1021195,1021737..1021809,1022934..1022975,1023985..1024071,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029778))
location: region:1016678-1029778:-1
so has part: feature:1029710-1029778:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1023985-1024071:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1021157-1021195:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016678-1016714:-1:exon

XP_055648199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029710-1029778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023985-1024071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021157-1021195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1016678-1016714:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X2
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEATRQPLHGNELGPIPAWAAVLPAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016678..1016714,1019482..1019651,1020053..1020105,1021737..1021809,1022934..1022975,1023752..1023817,1023985..1024071,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029778))
location: region:1016678-1029778:-1
so has part: feature:1029710-1029778:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1023985-1024071:-1:exon
so has part: feature:1023752-1023817:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016678-1016714:-1:exon

XP_055648198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029710-1029778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023985-1024071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023752-1023817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1016678-1016714:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X1
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEATRQPLHGNELGPIPAWAAVLPAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1016678..1016714,1019482..1019651,1020053..1020105,1021157..1021195,1021737..1021809,1022934..1022975,1023752..1023817,1023985..1024071,1025717..1025791,1026315..1026443,1027057..1027188,1028647..1028763,1029113..1029145,1029244..1029267,1029710..1029778))
location: region:1016678-1029778:-1
so has part: feature:1029710-1029778:-1:exon
so has part: feature:1029244-1029267:-1:exon
so has part: feature:1029113-1029145:-1:exon
so has part: feature:1028647-1028763:-1:exon
so has part: feature:1027057-1027188:-1:exon
so has part: feature:1026315-1026443:-1:exon
so has part: feature:1025717-1025791:-1:exon
so has part: feature:1023985-1024071:-1:exon
so has part: feature:1023752-1023817:-1:exon
so has part: feature:1022934-1022975:-1:exon
so has part: feature:1021737-1021809:-1:exon
so has part: feature:1021157-1021195:-1:exon
so has part: feature:1020053-1020105:-1:exon
so has part: feature:1019482-1019651:-1:exon
so has part: feature:1016678-1016714:-1:exon

XP_055648197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029710-1029778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029244-1029267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029113-1029145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028647-1028763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027057-1027188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026315-1026443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025717-1025791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023985-1024071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023752-1023817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1022934-1022975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1021737-1021809:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1021157-1021195:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1020053-1020105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1019482-1019651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1016678-1016714:-1:exon

COL2A1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: COL2A1
note: collagen type II alpha 1 chain; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1034634..1051635
location: region:1034634-1051635:1
so has part: feature:1034634-1051635:1:exon
subclass of: SO_0000010

101919991
type: Gene
SIO_000068: ncbigene

position:1034634:1
position: 1034634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051635:1
position: 1051635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034634-1051635:1:exon

COL2A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: COL2A1
product: collagen type II alpha 1 chain
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_055792340.1
SIO_010081: COL2A1
subclass of: SO_0000673
so part of: COL2A1
location: join(1034634..1034839,1036838..1037039,1037758..1037774,1038043..1038075,1038202..1038234,1038329..1038382,1038493..1038594,1038671..1038748,1038924..1038969,1039053..1039106,1039208..1039261,1039362..1039410,1039506..1039564,1039651..1039704,1040112..1040156,1040265..1040318,1040422..1040466,1040570..1040623,1040706..1040804,1041046..1041090,1041695..1041793,1042571..1042624,1043037..1043144,1043233..1043286,1043384..1043482,1044209..1044262,1044336..1044434,1044518..1044571,1044753..1044806,1045042..1045095,1045217..1045270,1045378..1045422,1045722..1045820,1045928..1046035,1046115..1046168,1046258..1046311,1046397..1046450,1046545..1046598,1046676..1046783,1046919..1046972,1047058..1047111,1047473..1047634,1047724..1047831,1048201..1048308,1048509..1048562,1048663..1048770,1049289..1049342,1049456..1049563,1049754..1049807,1049976..1050083,1050169..1050457,1050590..1050777,1051052..1051294,1051420..1051635)
location: region:1034634-1051635:1
so has part: feature:1034634-1034839:1:exon
so has part: feature:1036838-1037039:1:exon
so has part: feature:1037758-1037774:1:exon
so has part: feature:1038043-1038075:1:exon
so has part: feature:1038202-1038234:1:exon
so has part: feature:1038329-1038382:1:exon
so has part: feature:1038493-1038594:1:exon
so has part: feature:1038671-1038748:1:exon
so has part: feature:1038924-1038969:1:exon
so has part: feature:1039053-1039106:1:exon
so has part: feature:1039208-1039261:1:exon
so has part: feature:1039362-1039410:1:exon
so has part: feature:1039506-1039564:1:exon
so has part: feature:1039651-1039704:1:exon
so has part: feature:1040112-1040156:1:exon
so has part: feature:1040265-1040318:1:exon
so has part: feature:1040422-1040466:1:exon
so has part: feature:1040570-1040623:1:exon
so has part: feature:1040706-1040804:1:exon
so has part: feature:1041046-1041090:1:exon
so has part: feature:1041695-1041793:1:exon
so has part: feature:1042571-1042624:1:exon
so has part: feature:1043037-1043144:1:exon
so has part: feature:1043233-1043286:1:exon
so has part: feature:1043384-1043482:1:exon
so has part: feature:1044209-1044262:1:exon
so has part: feature:1044336-1044434:1:exon
so has part: feature:1044518-1044571:1:exon
so has part: feature:1044753-1044806:1:exon
so has part: feature:1045042-1045095:1:exon
so has part: feature:1045217-1045270:1:exon
so has part: feature:1045378-1045422:1:exon
so has part: feature:1045722-1045820:1:exon
so has part: feature:1045928-1046035:1:exon
so has part: feature:1046115-1046168:1:exon
so has part: feature:1046258-1046311:1:exon
so has part: feature:1046397-1046450:1:exon
so has part: feature:1046545-1046598:1:exon
so has part: feature:1046676-1046783:1:exon
so has part: feature:1046919-1046972:1:exon
so has part: feature:1047058-1047111:1:exon
so has part: feature:1047473-1047634:1:exon
so has part: feature:1047724-1047831:1:exon
so has part: feature:1048201-1048308:1:exon
so has part: feature:1048509-1048562:1:exon
so has part: feature:1048663-1048770:1:exon
so has part: feature:1049289-1049342:1:exon
so has part: feature:1049456-1049563:1:exon
so has part: feature:1049754-1049807:1:exon
so has part: feature:1049976-1050083:1:exon
so has part: feature:1050169-1050457:1:exon
so has part: feature:1050590-1050777:1:exon
so has part: feature:1051052-1051294:1:exon
so has part: feature:1051420-1051635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034634-1034839:1:exon

position:1034839:1
position: 1034839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036838-1037039:1:exon

position:1036838:1
position: 1036838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037039:1
position: 1037039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1037758-1037774:1:exon

position:1037758:1
position: 1037758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037774:1
position: 1037774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1038043-1038075:1:exon

position:1038043:1
position: 1038043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038075:1
position: 1038075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1038202-1038234:1:exon

position:1038202:1
position: 1038202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038234:1
position: 1038234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1038329-1038382:1:exon

position:1038329:1
position: 1038329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038382:1
position: 1038382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1038493-1038594:1:exon

position:1038493:1
position: 1038493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038594:1
position: 1038594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1038671-1038748:1:exon

position:1038671:1
position: 1038671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038748:1
position: 1038748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1038924-1038969:1:exon

position:1038924:1
position: 1038924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038969:1
position: 1038969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1039053-1039106:1:exon

position:1039053:1
position: 1039053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039106:1
position: 1039106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1039208-1039261:1:exon

position:1039208:1
position: 1039208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039261:1
position: 1039261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1039362-1039410:1:exon

position:1039362:1
position: 1039362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039410:1
position: 1039410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1039506-1039564:1:exon

position:1039506:1
position: 1039506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039564:1
position: 1039564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1039651-1039704:1:exon

position:1039651:1
position: 1039651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039704:1
position: 1039704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1040112-1040156:1:exon

position:1040112:1
position: 1040112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040156:1
position: 1040156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1040265-1040318:1:exon

position:1040265:1
position: 1040265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040318:1
position: 1040318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1040422-1040466:1:exon

position:1040422:1
position: 1040422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040466:1
position: 1040466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1040570-1040623:1:exon

position:1040570:1
position: 1040570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040623:1
position: 1040623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1040706-1040804:1:exon

position:1040706:1
position: 1040706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040804:1
position: 1040804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1041046-1041090:1:exon

position:1041046:1
position: 1041046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041090:1
position: 1041090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1041695-1041793:1:exon

position:1041695:1
position: 1041695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041793:1
position: 1041793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1042571-1042624:1:exon

position:1042571:1
position: 1042571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042624:1
position: 1042624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1043037-1043144:1:exon

position:1043037:1
position: 1043037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043144:1
position: 1043144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1043233-1043286:1:exon

position:1043233:1
position: 1043233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043286:1
position: 1043286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1043384-1043482:1:exon

position:1043384:1
position: 1043384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043482:1
position: 1043482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1044209-1044262:1:exon

position:1044209:1
position: 1044209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044262:1
position: 1044262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1044336-1044434:1:exon

position:1044336:1
position: 1044336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044434:1
position: 1044434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1044518-1044571:1:exon

position:1044518:1
position: 1044518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044571:1
position: 1044571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1044753-1044806:1:exon

position:1044753:1
position: 1044753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044806:1
position: 1044806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1045042-1045095:1:exon

position:1045042:1
position: 1045042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045095:1
position: 1045095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1045217-1045270:1:exon

position:1045217:1
position: 1045217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045270:1
position: 1045270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1045378-1045422:1:exon

position:1045378:1
position: 1045378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045422:1
position: 1045422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1045722-1045820:1:exon

position:1045722:1
position: 1045722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045820:1
position: 1045820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1045928-1046035:1:exon

position:1045928:1
position: 1045928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046035:1
position: 1046035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1046115-1046168:1:exon

position:1046115:1
position: 1046115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046168:1
position: 1046168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1046258-1046311:1:exon

position:1046258:1
position: 1046258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046311:1
position: 1046311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1046397-1046450:1:exon

position:1046397:1
position: 1046397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046450:1
position: 1046450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1046545-1046598:1:exon

position:1046545:1
position: 1046545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046598:1
position: 1046598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1046676-1046783:1:exon

position:1046676:1
position: 1046676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046783:1
position: 1046783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1046919-1046972:1:exon

position:1046919:1
position: 1046919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046972:1
position: 1046972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1047058-1047111:1:exon

position:1047058:1
position: 1047058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047111:1
position: 1047111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1047473-1047634:1:exon

position:1047473:1
position: 1047473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047634:1
position: 1047634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1047724-1047831:1:exon

position:1047724:1
position: 1047724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047831:1
position: 1047831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1048201-1048308:1:exon

position:1048201:1
position: 1048201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048308:1
position: 1048308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1048509-1048562:1:exon

position:1048509:1
position: 1048509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048562:1
position: 1048562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1048663-1048770:1:exon

position:1048663:1
position: 1048663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048770:1
position: 1048770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1049289-1049342:1:exon

position:1049289:1
position: 1049289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049342:1
position: 1049342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1049456-1049563:1:exon

position:1049456:1
position: 1049456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049563:1
position: 1049563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1049754-1049807:1:exon

position:1049754:1
position: 1049754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049807:1
position: 1049807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1049976-1050083:1:exon

position:1049976:1
position: 1049976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050083:1
position: 1050083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1050169-1050457:1:exon

position:1050169:1
position: 1050169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050457:1
position: 1050457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1050590-1050777:1:exon

position:1050590:1
position: 1050590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050777:1
position: 1050777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1051052-1051294:1:exon

position:1051052:1
position: 1051052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051294:1
position: 1051294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1051420-1051635:1:exon

position:1051420:1
position: 1051420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL2A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: COL2A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: collagen alpha-1(II) chain
translation: MPGRPLPPLRPLPLLRLLPLLLPLLLLLPPPPAAAQDRDLPEAGSCLQDGQSYRDKDVWKPEPCRICVCDTGTVLCDEIICEELRDCPSPEIPFGECCPICPTDQPSGQPGPKGQKGEPGDIKDVVGPRGPPGPQGPAGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGNPGEPGEPGAAGPMGPRGPPGPPGKPGDDGETGKPGKSGERGPPRPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQTEKGPDPIRYMRADEAAGSLRQHDVEVDATLKSLNNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETGETCVYPNPSSIPKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLSTEGSQNVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGKTVIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL
SIO_010081: COL2A1
subclass of: SO_0000673
so part of: COL2A1
location: join(1034719..1034839,1036838..1037039,1037758..1037774,1038043..1038075,1038202..1038234,1038329..1038382,1038493..1038594,1038671..1038748,1038924..1038969,1039053..1039106,1039208..1039261,1039362..1039410,1039506..1039564,1039651..1039704,1040112..1040156,1040265..1040318,1040422..1040466,1040570..1040623,1040706..1040804,1041046..1041090,1041695..1041793,1042571..1042624,1043037..1043144,1043233..1043286,1043384..1043482,1044209..1044262,1044336..1044434,1044518..1044571,1044753..1044806,1045042..1045095,1045217..1045270,1045378..1045422,1045722..1045820,1045928..1046035,1046115..1046168,1046258..1046311,1046397..1046450,1046545..1046598,1046676..1046783,1046919..1046972,1047058..1047111,1047473..1047634,1047724..1047831,1048201..1048308,1048509..1048562,1048663..1048770,1049289..1049342,1049456..1049563,1049754..1049807,1049976..1050083,1050169..1050457,1050590..1050777,1051052..1051294,1051420..1051566)
location: region:1034719-1051566:1
so has part: feature:1034719-1034839:1:exon
so has part: feature:1036838-1037039:1:exon
so has part: feature:1037758-1037774:1:exon
so has part: feature:1038043-1038075:1:exon
so has part: feature:1038202-1038234:1:exon
so has part: feature:1038329-1038382:1:exon
so has part: feature:1038493-1038594:1:exon
so has part: feature:1038671-1038748:1:exon
so has part: feature:1038924-1038969:1:exon
so has part: feature:1039053-1039106:1:exon
so has part: feature:1039208-1039261:1:exon
so has part: feature:1039362-1039410:1:exon
so has part: feature:1039506-1039564:1:exon
so has part: feature:1039651-1039704:1:exon
so has part: feature:1040112-1040156:1:exon
so has part: feature:1040265-1040318:1:exon
so has part: feature:1040422-1040466:1:exon
so has part: feature:1040570-1040623:1:exon
so has part: feature:1040706-1040804:1:exon
so has part: feature:1041046-1041090:1:exon
so has part: feature:1041695-1041793:1:exon
so has part: feature:1042571-1042624:1:exon
so has part: feature:1043037-1043144:1:exon
so has part: feature:1043233-1043286:1:exon
so has part: feature:1043384-1043482:1:exon
so has part: feature:1044209-1044262:1:exon
so has part: feature:1044336-1044434:1:exon
so has part: feature:1044518-1044571:1:exon
so has part: feature:1044753-1044806:1:exon
so has part: feature:1045042-1045095:1:exon
so has part: feature:1045217-1045270:1:exon
so has part: feature:1045378-1045422:1:exon
so has part: feature:1045722-1045820:1:exon
so has part: feature:1045928-1046035:1:exon
so has part: feature:1046115-1046168:1:exon
so has part: feature:1046258-1046311:1:exon
so has part: feature:1046397-1046450:1:exon
so has part: feature:1046545-1046598:1:exon
so has part: feature:1046676-1046783:1:exon
so has part: feature:1046919-1046972:1:exon
so has part: feature:1047058-1047111:1:exon
so has part: feature:1047473-1047634:1:exon
so has part: feature:1047724-1047831:1:exon
so has part: feature:1048201-1048308:1:exon
so has part: feature:1048509-1048562:1:exon
so has part: feature:1048663-1048770:1:exon
so has part: feature:1049289-1049342:1:exon
so has part: feature:1049456-1049563:1:exon
so has part: feature:1049754-1049807:1:exon
so has part: feature:1049976-1050083:1:exon
so has part: feature:1050169-1050457:1:exon
so has part: feature:1050590-1050777:1:exon
so has part: feature:1051052-1051294:1:exon
so has part: feature:1051420-1051566:1:exon

XP_055648315.1
type: Protein
SIO_000068: ncbiprotein

position:1034719:1
position: 1034719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051566:1
position: 1051566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034719-1034839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036838-1037039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037758-1037774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1038043-1038075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038202-1038234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038329-1038382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038493-1038594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038671-1038748:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038924-1038969:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1039053-1039106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1039208-1039261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1039362-1039410:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1039506-1039564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1039651-1039704:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1040112-1040156:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1040265-1040318:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1040422-1040466:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1040570-1040623:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1040706-1040804:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1041046-1041090:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1041695-1041793:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1042571-1042624:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1043037-1043144:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1043233-1043286:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1043384-1043482:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1044209-1044262:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1044336-1044434:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1044518-1044571:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1044753-1044806:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1045042-1045095:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1045217-1045270:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1045378-1045422:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1045722-1045820:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1045928-1046035:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1046115-1046168:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1046258-1046311:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1046397-1046450:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1046545-1046598:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1046676-1046783:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1046919-1046972:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1047058-1047111:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1047473-1047634:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1047724-1047831:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1048201-1048308:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1048509-1048562:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1048663-1048770:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1049289-1049342:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1049456-1049563:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1049754-1049807:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1049976-1050083:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1050169-1050457:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1050590-1050777:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1051052-1051294:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1051420-1051566:1:exon

TMEM106C
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: TMEM106C
note: transmembrane protein 106C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1053911..1058359)
location: region:1053911-1058359:-1
so has part: feature:1053911-1058359:-1:exon
subclass of: SO_0000010

101920164
type: Gene
SIO_000068: ncbigene

position:1053911:-1
position: 1053911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058359:-1
position: 1058359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053911-1058359:-1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: TMEM106C
product: transmembrane protein 106C
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792341.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(1053911..1055261,1055683..1055736,1056033..1056082,1056330..1056470,1056570..1056729,1057277..1057340,1057429..1057648,1058269..1058359))
location: region:1053911-1058359:-1
so has part: feature:1058269-1058359:-1:exon
so has part: feature:1057429-1057648:-1:exon
so has part: feature:1057277-1057340:-1:exon
so has part: feature:1056570-1056729:-1:exon
so has part: feature:1056330-1056470:-1:exon
so has part: feature:1056033-1056082:-1:exon
so has part: feature:1055683-1055736:-1:exon
so has part: feature:1053911-1055261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058269-1058359:-1:exon

position:1058269:-1
position: 1058269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057429-1057648:-1:exon

position:1057429:-1
position: 1057429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057648:-1
position: 1057648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057277-1057340:-1:exon

position:1057277:-1
position: 1057277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057340:-1
position: 1057340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1056570-1056729:-1:exon

position:1056570:-1
position: 1056570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056729:-1
position: 1056729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1056330-1056470:-1:exon

position:1056330:-1
position: 1056330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056470:-1
position: 1056470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1056033-1056082:-1:exon

position:1056033:-1
position: 1056033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056082:-1
position: 1056082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1055683-1055736:-1:exon

position:1055683:-1
position: 1055683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055736:-1
position: 1055736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1053911-1055261:-1:exon

position:1055261:-1
position: 1055261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C
translation: MGSALSLPVSGAPPRQRQKPEDDDDDLLNSRGRVEDIAKFPYVEFTGQDSITCPTCQGTGCIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLISGLVVFFLFPHSVLVNDDGIKVVQVWFDKKNSVVILAITATLRIRNSNFYSVTVTSLTSQVQYMNTVVGTQQITNVSSIQPLSDKLVNFTVKAELGGPFSYVYYFCTFPKVKVHNIVIFMRTSVKLSYIGHMTQSALETYHYVDCSTNSTAALDPLPLQSLSTQGAAREAKSKP
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(1055099..1055261,1055683..1055736,1056033..1056082,1056330..1056470,1056570..1056729,1057277..1057340,1057429..1057621))
location: region:1055099-1057621:-1
so has part: feature:1057429-1057621:-1:exon
so has part: feature:1057277-1057340:-1:exon
so has part: feature:1056570-1056729:-1:exon
so has part: feature:1056330-1056470:-1:exon
so has part: feature:1056033-1056082:-1:exon
so has part: feature:1055683-1055736:-1:exon
so has part: feature:1055099-1055261:-1:exon

XP_055648316.1
type: Protein
SIO_000068: ncbiprotein

position:1055099:-1
position: 1055099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057621:-1
position: 1057621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057429-1057621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057277-1057340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1056570-1056729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1056330-1056470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1056033-1056082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1055683-1055736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055099-1055261:-1:exon

VDR
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: VDR
note: vitamin D receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1063245..1102834
location: region:1063245-1102834:1
so has part: feature:1063245-1102834:1:exon
subclass of: SO_0000010

101920347
type: Gene
SIO_000068: ncbigene

position:1063245:1
position: 1063245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102834:1
position: 1102834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063245-1102834:1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: VDR
product: vitamin D receptor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792077.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1063245..1063276,1064485..1064580,1067732..1067819,1070174..1070358,1082977..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1102834)
location: region:1063245-1102834:1
so has part: feature:1063245-1063276:1:exon
so has part: feature:1064485-1064580:1:exon
so has part: feature:1067732-1067819:1:exon
so has part: feature:1070174-1070358:1:exon
so has part: feature:1082977-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1102834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063245-1063276:1:exon

position:1063276:1
position: 1063276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064485-1064580:1:exon

position:1064485:1
position: 1064485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064580:1
position: 1064580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1067732-1067819:1:exon

position:1067732:1
position: 1067732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067819:1
position: 1067819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070174-1070358:1:exon

position:1070174:1
position: 1070174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070358:1
position: 1070358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1082977-1083048:1:exon

position:1082977:1
position: 1082977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083048:1
position: 1083048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1084595-1084745:1:exon

position:1084595:1
position: 1084595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084745:1
position: 1084745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1090496-1090626:1:exon

position:1090496:1
position: 1090496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090626:1
position: 1090626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1098188-1098372:1:exon

position:1098188:1
position: 1098188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098372:1
position: 1098372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1098583-1098706:1:exon

position:1098583:1
position: 1098583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098706:1
position: 1098706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1099215-1099386:1:exon

position:1099215:1
position: 1099215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099386:1
position: 1099386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1100260-1100411:1:exon

position:1100260:1
position: 1100260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100411:1
position: 1100411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1101387-1101503:1:exon

position:1101387:1
position: 1101387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101503:1
position: 1101503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1101639-1102834:1:exon

position:1101639:1
position: 1101639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: VDR
product: vitamin D receptor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792075.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1063245..1063276,1064485..1064580,1067732..1067819,1082977..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1102834)
location: region:1063245-1102834:1
so has part: feature:1063245-1063276:1:exon
so has part: feature:1064485-1064580:1:exon
so has part: feature:1067732-1067819:1:exon
so has part: feature:1082977-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1102834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063245-1063276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064485-1064580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067732-1067819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082977-1083048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101639-1102834:1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: VDR
product: vitamin D receptor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792078.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1063261..1063276,1064485..1064580,1082977..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1102834)
location: region:1063261-1102834:1
so has part: feature:1063261-1063276:1:exon
so has part: feature:1064485-1064580:1:exon
so has part: feature:1082977-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1102834:1:exon

position:1063261:1
position: 1063261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063261-1063276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064485-1064580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082977-1083048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101639-1102834:1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: VDR
product: vitamin D receptor, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792079.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1068626..1069899,1070174..1070358,1082977..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1102834)
location: region:1068626-1102834:1
so has part: feature:1068626-1069899:1:exon
so has part: feature:1070174-1070358:1:exon
so has part: feature:1082977-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1102834:1:exon

position:1068626:1
position: 1068626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068626-1069899:1:exon

position:1069899:1
position: 1069899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1070174-1070358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082977-1083048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101639-1102834:1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: VDR
product: vitamin D receptor, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792081.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1068626..1069899,1082977..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1102834)
location: region:1068626-1102834:1
so has part: feature:1068626-1069899:1:exon
so has part: feature:1082977-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1102834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1068626-1069899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1082977-1083048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1101639-1102834:1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: VDR
product: vitamin D receptor, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792080.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1071694..1071896,1082977..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1102834)
location: region:1071694-1102834:1
so has part: feature:1071694-1071896:1:exon
so has part: feature:1082977-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1102834:1:exon

position:1071694:1
position: 1071694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071694-1071896:1:exon

position:1071896:1
position: 1071896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1082977-1083048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1101639-1102834:1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: VDR
product: vitamin D receptor, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792082.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1072595..1073179,1082977..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1102834)
location: region:1072595-1102834:1
so has part: feature:1072595-1073179:1:exon
so has part: feature:1082977-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1102834:1:exon

position:1072595:1
position: 1072595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072595-1073179:1:exon

position:1073179:1
position: 1073179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1082977-1083048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1101639-1102834:1:exon

LOC114010992
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: LOC114010992
note: uncharacterized LOC114010992; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1079124..1087601)
location: region:1079124-1087601:-1
so has part: feature:1079124-1087601:-1:exon
subclass of: SO_0000011

114010992
type: Gene
SIO_000068: ncbigene

position:1079124:-1
position: 1079124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087601:-1
position: 1087601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079124-1087601:-1:exon

LOC114010992
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8954
nc RNA class: lncRNA
gene: LOC114010992
product: uncharacterized LOC114010992
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_003552693.2
SIO_010081: LOC114010992
subclass of: SO_0000673
so part of: LOC114010992
location: complement(join(1079124..1079722,1084079..1084217,1086889..1087601))
location: region:1079124-1087601:-1
so has part: feature:1086889-1087601:-1:exon
so has part: feature:1084079-1084217:-1:exon
so has part: feature:1079124-1079722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1086889-1087601:-1:exon

position:1086889:-1
position: 1086889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1084079-1084217:-1:exon

position:1084079:-1
position: 1084079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084217:-1
position: 1084217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1079124-1079722:-1:exon

position:1079722:-1
position: 1079722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MSQLQSSWEMHQQSVAYLPDTDMETMAASTSLSDPAGEFDKNMPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFNKFRPPVRSNPGNRGAARSSSILTQDLSSEDSTDLFGSDAFSTFPESVEPQMFSNLVLSEENDETTSMNIDFSHLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRISDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1082985..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1101898)
location: region:1082985-1101898:1
so has part: feature:1082985-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1101898:1:exon

XP_055648050.1
type: Protein
SIO_000068: ncbiprotein

position:1082985:1
position: 1082985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101898:1
position: 1101898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082985-1083048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101639-1101898:1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MSQLQSSWEMHQQSVAYLPDTDMETMAASTSLSDPAGEFDKNMPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFNKFRPPVRSNPGNRGAARSSSILTQDLSSEDSTDLFGSDAFSTFPESVEPQMFSNLVLSEENDETTSMNIDFSHLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRISDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1082985..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1101898)
location: region:1082985-1101898:1
so has part: feature:1082985-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1101898:1:exon

XP_055648052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082985-1083048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101639-1101898:1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MSQLQSSWEMHQQSVAYLPDTDMETMAASTSLSDPAGEFDKNMPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFNKFRPPVRSNPGNRGAARSSSILTQDLSSEDSTDLFGSDAFSTFPESVEPQMFSNLVLSEENDETTSMNIDFSHLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRISDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1082985..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1101898)
location: region:1082985-1101898:1
so has part: feature:1082985-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1101898:1:exon

XP_055648053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082985-1083048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101639-1101898:1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MSQLQSSWEMHQQSVAYLPDTDMETMAASTSLSDPAGEFDKNMPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFNKFRPPVRSNPGNRGAARSSSILTQDLSSEDSTDLFGSDAFSTFPESVEPQMFSNLVLSEENDETTSMNIDFSHLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRISDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1082985..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1101898)
location: region:1082985-1101898:1
so has part: feature:1082985-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1101898:1:exon

XP_055648054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082985-1083048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101639-1101898:1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MSQLQSSWEMHQQSVAYLPDTDMETMAASTSLSDPAGEFDKNMPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFNKFRPPVRSNPGNRGAARSSSILTQDLSSEDSTDLFGSDAFSTFPESVEPQMFSNLVLSEENDETTSMNIDFSHLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRISDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1082985..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1101898)
location: region:1082985-1101898:1
so has part: feature:1082985-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1101898:1:exon

XP_055648055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082985-1083048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101639-1101898:1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MSQLQSSWEMHQQSVAYLPDTDMETMAASTSLSDPAGEFDKNMPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFNKFRPPVRSNPGNRGAARSSSILTQDLSSEDSTDLFGSDAFSTFPESVEPQMFSNLVLSEENDETTSMNIDFSHLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRISDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1082985..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1101898)
location: region:1082985-1101898:1
so has part: feature:1082985-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1101898:1:exon

XP_055648056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082985-1083048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101639-1101898:1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MSQLQSSWEMHQQSVAYLPDTDMETMAASTSLSDPAGEFDKNMPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFNKFRPPVRSNPGNRGAARSSSILTQDLSSEDSTDLFGSDAFSTFPESVEPQMFSNLVLSEENDETTSMNIDFSHLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRISDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(1082985..1083048,1084595..1084745,1090496..1090626,1098188..1098372,1098583..1098706,1099215..1099386,1100260..1100411,1101387..1101503,1101639..1101898)
location: region:1082985-1101898:1
so has part: feature:1082985-1083048:1:exon
so has part: feature:1084595-1084745:1:exon
so has part: feature:1090496-1090626:1:exon
so has part: feature:1098188-1098372:1:exon
so has part: feature:1098583-1098706:1:exon
so has part: feature:1099215-1099386:1:exon
so has part: feature:1100260-1100411:1:exon
so has part: feature:1101387-1101503:1:exon
so has part: feature:1101639-1101898:1:exon

XP_055648057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082985-1083048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084595-1084745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090496-1090626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098188-1098372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098583-1098706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099215-1099386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100260-1100411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101387-1101503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101639-1101898:1:exon

MYG1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: MYG1
note: MYG1 exonuclease; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1103339..1106798
location: region:1103339-1106798:1
so has part: feature:1103339-1106798:1:exon
subclass of: SO_0000010

101920521
type: Gene
SIO_000068: ncbigene

position:1103339:1
position: 1103339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106798:1
position: 1106798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103339-1106798:1:exon

MYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: MYG1
product: MYG1 exonuclease
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792083.1
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: join(1103339..1103518,1104512..1104624,1104702..1104861,1105064..1105213,1105295..1105417,1105999..1106180,1106295..1106798)
location: region:1103339-1106798:1
so has part: feature:1103339-1103518:1:exon
so has part: feature:1104512-1104624:1:exon
so has part: feature:1104702-1104861:1:exon
so has part: feature:1105064-1105213:1:exon
so has part: feature:1105295-1105417:1:exon
so has part: feature:1105999-1106180:1:exon
so has part: feature:1106295-1106798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103339-1103518:1:exon

position:1103518:1
position: 1103518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104512-1104624:1:exon

position:1104512:1
position: 1104512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104624:1
position: 1104624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1104702-1104861:1:exon

position:1104702:1
position: 1104702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104861:1
position: 1104861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105064-1105213:1:exon

position:1105064:1
position: 1105064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105213:1
position: 1105213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1105295-1105417:1:exon

position:1105295:1
position: 1105295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105417:1
position: 1105417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1105999-1106180:1:exon

position:1105999:1
position: 1105999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106180:1
position: 1106180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1106295-1106798:1:exon

position:1106295:1
position: 1106295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: MYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MYG1 exonuclease
translation: MRRGLRLMAAALGSRSAAGPAPAPASAPRIGTHDGTFHCDEVLACCLLRLLPRYRDAEVVRTRDPQRLAQCDVVVDVGGEYDPERHRYDHHQRSFTQSMRSLRPDKPWTTKLSSAGLVYCHFGSQILAELLGQPEDGTVVTVLYDKLYENFVQEIDAIDNGIAQAEGEPRYALTTTLSARVGHLNPRWNDPDQDTEAGFRRAMELVRGEFMDRLDYYHRAWLPARVLVEEAIRRRFEVDASGLVLELPQGGCPWKEHVFSLEQELALPEPLQLVLFPDRSGQWRVQSVPAGPHTFQSRLPLPEPWRGVRDEALSQLAGIPGCVFVHASGFIGGNRTREGALEMARQTLAQQHEGGAQSG
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: join(1103354..1103518,1104512..1104624,1104702..1104861,1105064..1105213,1105295..1105417,1105999..1106180,1106295..1106481)
location: region:1103354-1106481:1
so has part: feature:1103354-1103518:1:exon
so has part: feature:1104512-1104624:1:exon
so has part: feature:1104702-1104861:1:exon
so has part: feature:1105064-1105213:1:exon
so has part: feature:1105295-1105417:1:exon
so has part: feature:1105999-1106180:1:exon
so has part: feature:1106295-1106481:1:exon

XP_055648058.1
type: Protein
SIO_000068: ncbiprotein

position:1103354:1
position: 1103354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106481:1
position: 1106481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103354-1103518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104512-1104624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104702-1104861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105064-1105213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105295-1105417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1105999-1106180:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1106295-1106481:1:exon

AAAS
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: AAAS
note: aladin WD repeat nucleoporin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1108330..1115483)
location: region:1108330-1115483:-1
so has part: feature:1108330-1115483:-1:exon
subclass of: SO_0000010

101920693
type: Gene
SIO_000068: ncbigene

position:1108330:-1
position: 1108330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115483:-1
position: 1115483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108330-1115483:-1:exon

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: AAAS
product: aladin WD repeat nucleoporin
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
transcript id: XM_055792074.1
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: complement(join(1108330..1108653,1108856..1108940,1109185..1109266,1110081..1110148,1110287..1110380,1110865..1110955,1111077..1111137,1111350..1111474,1111723..1111843,1111979..1112122,1113217..1113315,1113781..1113827,1114125..1114216,1114374..1114429,1114783..1114910,1115344..1115483))
location: region:1108330-1115483:-1
so has part: feature:1115344-1115483:-1:exon
so has part: feature:1114783-1114910:-1:exon
so has part: feature:1114374-1114429:-1:exon
so has part: feature:1114125-1114216:-1:exon
so has part: feature:1113781-1113827:-1:exon
so has part: feature:1113217-1113315:-1:exon
so has part: feature:1111979-1112122:-1:exon
so has part: feature:1111723-1111843:-1:exon
so has part: feature:1111350-1111474:-1:exon
so has part: feature:1111077-1111137:-1:exon
so has part: feature:1110865-1110955:-1:exon
so has part: feature:1110287-1110380:-1:exon
so has part: feature:1110081-1110148:-1:exon
so has part: feature:1109185-1109266:-1:exon
so has part: feature:1108856-1108940:-1:exon
so has part: feature:1108330-1108653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115344-1115483:-1:exon

position:1115344:-1
position: 1115344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1114783-1114910:-1:exon

position:1114783:-1
position: 1114783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114910:-1
position: 1114910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1114374-1114429:-1:exon

position:1114374:-1
position: 1114374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114429:-1
position: 1114429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1114125-1114216:-1:exon

position:1114125:-1
position: 1114125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114216:-1
position: 1114216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1113781-1113827:-1:exon

position:1113781:-1
position: 1113781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113827:-1
position: 1113827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1113217-1113315:-1:exon

position:1113217:-1
position: 1113217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113315:-1
position: 1113315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1111979-1112122:-1:exon

position:1111979:-1
position: 1111979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112122:-1
position: 1112122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1111723-1111843:-1:exon

position:1111723:-1
position: 1111723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111843:-1
position: 1111843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1111350-1111474:-1:exon

position:1111350:-1
position: 1111350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111474:-1
position: 1111474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1111077-1111137:-1:exon

position:1111077:-1
position: 1111077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111137:-1
position: 1111137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1110865-1110955:-1:exon

position:1110865:-1
position: 1110865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110955:-1
position: 1110955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1110287-1110380:-1:exon

position:1110287:-1
position: 1110287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110380:-1
position: 1110380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1110081-1110148:-1:exon

position:1110081:-1
position: 1110081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110148:-1
position: 1110148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1109185-1109266:-1:exon

position:1109185:-1
position: 1109185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109266:-1
position: 1109266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1108856-1108940:-1:exon

position:1108856:-1
position: 1108856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108940:-1
position: 1108940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1108330-1108653:-1:exon

position:1108653:-1
position: 1108653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: AAAS
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: aladin
translation: MCSLGLFPPPPPPGAVTLYELSNALVCGAPPEPLPLALQSQLADLPVLSLPKETLKAHSRLEHSARPAFIHHREALWKRCLSAWRDVGLSGVLREIASAEEEGLRWAKVGSSHALALCHWLSSLHGSLFPHLSLASEDMIAAFSQAVDWAGCTVRAFAWHPHTSKFAVALLDDSVRVYNSNSATIPSLKHRLQRNVAAVAWKPLCASILAVACQSCVLVWHLDPTSLSTRPSSGCAQVLSYPGHSPVTSLAWAPSGDLLLSASPVDTAMLVWDVSTENCVQLQWFGGGGVTYLAWSPDGSKVLAATPSAVFRVWEAQMWTCERWPTIKGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGEERIGGDVHSMVWDPTGERLAVIIRGNPDAPGSQTVIAVFRTRNSPVFELLPCGFLRGERGAQPQLIAFHPCFQKGALLTVCWSTGKISHVPFFFTSAHAPHASPSRSPVVASASVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: complement(join(1108519..1108653,1108856..1108940,1109185..1109266,1110081..1110148,1110287..1110380,1110865..1110955,1111077..1111137,1111350..1111474,1111723..1111843,1111979..1112122,1113217..1113315,1113781..1113827,1114125..1114216,1114374..1114429,1114783..1114910,1115344..1115468))
location: region:1108519-1115468:-1
so has part: feature:1115344-1115468:-1:exon
so has part: feature:1114783-1114910:-1:exon
so has part: feature:1114374-1114429:-1:exon
so has part: feature:1114125-1114216:-1:exon
so has part: feature:1113781-1113827:-1:exon
so has part: feature:1113217-1113315:-1:exon
so has part: feature:1111979-1112122:-1:exon
so has part: feature:1111723-1111843:-1:exon
so has part: feature:1111350-1111474:-1:exon
so has part: feature:1111077-1111137:-1:exon
so has part: feature:1110865-1110955:-1:exon
so has part: feature:1110287-1110380:-1:exon
so has part: feature:1110081-1110148:-1:exon
so has part: feature:1109185-1109266:-1:exon
so has part: feature:1108856-1108940:-1:exon
so has part: feature:1108519-1108653:-1:exon

XP_055648049.1
type: Protein
SIO_000068: ncbiprotein

position:1108519:-1
position: 1108519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115468:-1
position: 1115468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115344-1115468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1114783-1114910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1114374-1114429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1114125-1114216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1113781-1113827:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1113217-1113315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1111979-1112122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1111723-1111843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1111350-1111474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111077-1111137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110865-1110955:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1110287-1110380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1110081-1110148:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1109185-1109266:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1108856-1108940:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1108519-1108653:-1:exon

SP7
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: SP7
note: Sp7 transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1118666..1122439)
location: region:1118666-1122439:-1
so has part: feature:1118666-1122439:-1:exon
subclass of: SO_0000010

101920863
type: Gene
SIO_000068: ncbigene

position:1118666:-1
position: 1118666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122439:-1
position: 1122439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1118666-1122439:-1:exon

SP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: SP7
product: Sp7 transcription factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_055792243.1
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: complement(join(1118666..1119868,1122358..1122439))
location: region:1118666-1122439:-1
so has part: feature:1122358-1122439:-1:exon
so has part: feature:1118666-1119868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1122358-1122439:-1:exon

position:1122358:-1
position: 1122358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1118666-1119868:-1:exon

position:1119868:-1
position: 1119868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: SP7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor Sp7
translation: MGDSYTAAFPSAPGLLSPSASPQASPSPYXPDYGPFGHPFPAPTGAQEVLGAPVVVTAKGHPPGDCLPGVYPSLEMPHPYGSWYKGGIGGGXPGGSGPAAPSWWDVHPNGGWLGGPAGAEGLQGSLQGQPTLSPPLPTYGSDFGALNPPPYTSNPAAPPTPKTNPGETPKGPRGGSLGGRPACDCPNCQELERLGGPXGSRRKPVHSCHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCLLCSKRFTRSDHLSKHQKTHAESGTPKPPPGTGGEQPPASPRQPPASPGXDAGSPEAGSLLEI
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: complement(1118788..1119779)
location: region:1118788-1119779:-1
so has part: feature:1118788-1119779:-1:exon

XP_055648218.1
type: Protein
SIO_000068: ncbiprotein

position:1118788:-1
position: 1118788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119779:-1
position: 1119779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1118788-1119779:-1:exon

SP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: SP1
note: Sp1 transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1132028..1150744
location: region:1132028-1150744:1
so has part: feature:1132028-1150744:1:exon
subclass of: SO_0000010

101921378
type: Gene
SIO_000068: ncbigene

position:1132028:1
position: 1132028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150744:1
position: 1150744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132028-1150744:1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: SP1
product: Sp1 transcription factor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792172.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(1132028..1132156,1133293..1133387,1134076..1135260,1135360..1135561,1146143..1146311,1146467..1146666,1146779..1150744)
location: region:1132028-1150744:1
so has part: feature:1132028-1132156:1:exon
so has part: feature:1133293-1133387:1:exon
so has part: feature:1134076-1135260:1:exon
so has part: feature:1135360-1135561:1:exon
so has part: feature:1146143-1146311:1:exon
so has part: feature:1146467-1146666:1:exon
so has part: feature:1146779-1150744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1132028-1132156:1:exon

position:1132156:1
position: 1132156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1133293-1133387:1:exon

position:1133293:1
position: 1133293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133387:1
position: 1133387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1134076-1135260:1:exon

position:1134076:1
position: 1134076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135260:1
position: 1135260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1135360-1135561:1:exon

position:1135360:1
position: 1135360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135561:1
position: 1135561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1146143-1146311:1:exon

position:1146143:1
position: 1146143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146311:1
position: 1146311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1146467-1146666:1:exon

position:1146467:1
position: 1146467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146666:1
position: 1146666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1146779-1150744:1:exon

position:1146779:1
position: 1146779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: SP1
product: Sp1 transcription factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792170.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(1132029..1132156,1133293..1133387,1134076..1135561,1146143..1146311,1146467..1146666,1146779..1150744)
location: region:1132029-1150744:1
so has part: feature:1132029-1132156:1:exon
so has part: feature:1133293-1133387:1:exon
so has part: feature:1134076-1135561:1:exon
so has part: feature:1146143-1146311:1:exon
so has part: feature:1146467-1146666:1:exon
so has part: feature:1146779-1150744:1:exon

position:1132029:1
position: 1132029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132029-1132156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133293-1133387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1134076-1135561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146143-1146311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146467-1146666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1146779-1150744:1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X1
translation: MSDQESPEEMVTVKPEKGEGDASSNSSTGGGEGQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLTAAAAQIAQSANGWQIISAGSSTPTASKEQGSNGGDASKSRPVSAGQYVVTTASNLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTSAQVNVQQDASGQLQIIPGTNQQIITSRAGTSNLIAMPNLLQQAVPIQGVGLANNTLSGQTQYVANVPVALNGNITLLPVNSVATSLAPTSQTVTLSSSGSPDSSSQPATSGTAISSTNTATSHASSSAYFTNANSYSTTTTTSNMGIMNFSTSTTVGTNVQAQTPQRVSSVQSSDSLQSQVSGVALQPGQQKEGDQSQQSQQQQQILIQPQLVQGGQAIQALQTTPLSGQTFATQAISQDALQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSMPGLQTINLSALGASGIQVHQLQGLPLAIANTAGDHSTQLGLHGTSGDGLGDENAAVEEGETSPDPQPQQGRKVRREACTCPYCKDSEGRSSGDPGKKKQHICHIPGCGKVYGKTSHLRAHLRWHTGERPFVCTWILCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGAANNVAMNVSAVPMDTGASAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(1132150..1132156,1133293..1133387,1134076..1135561,1146143..1146311,1146467..1146666,1146779..1147098)
location: region:1132150-1147098:1
so has part: feature:1132150-1132156:1:exon
so has part: feature:1133293-1133387:1:exon
so has part: feature:1134076-1135561:1:exon
so has part: feature:1146143-1146311:1:exon
so has part: feature:1146467-1146666:1:exon
so has part: feature:1146779-1147098:1:exon

XP_055648145.1
type: Protein
SIO_000068: ncbiprotein

position:1132150:1
position: 1132150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147098:1
position: 1147098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132150-1132156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133293-1133387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1134076-1135561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146143-1146311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146467-1146666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1146779-1147098:1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X3
translation: MSDQESPEEMVTVKPEKGEGDASSNSSTGGGEGQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLTAAAAQIAQSANGWQIISAGSSTPTASKEQGSNGGDASKSRPVSAGQYVVTTASNLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTSAQVNVQQDASGQLQIIPGTNQQIITSRAGTSNLIAMPNLLQQAVPIQGVGLANNTLSGQTQYVANVPVALNGNITLLPVNSVATSLAPTSQTVTLSSSGSPDSSSQPATSGTAISSTNTATSHASSSAYFTNANSYSTTTTTSNMGIMNFSTSTTVGTNVQAQTPQRVSSVQSSDSLQSQVSGVALQPGQQKEGDQSQQSQQQQQILIQPQLVQGGQAIQALQTTPLSGQTFATQAISQDALQNLQLQAVPNSGPIIIRTPTGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSMPGLQTINLSALGASGIQVHQLQGLPLAIANTAGDHSTQLGLHGTSGDGLGDENAAVEEGETSPDPQPQQGRKVRREACTCPYCKDSEGRSSGDPGKKKQHICHIPGCGKVYGKTSHLRAHLRWHTGERPFVCTWILCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGAANNVAMNVSAVPMDTGASAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(1132150..1132156,1133293..1133387,1134076..1135260,1135360..1135561,1146143..1146311,1146467..1146666,1146779..1147098)
location: region:1132150-1147098:1
so has part: feature:1132150-1132156:1:exon
so has part: feature:1133293-1133387:1:exon
so has part: feature:1134076-1135260:1:exon
so has part: feature:1135360-1135561:1:exon
so has part: feature:1146143-1146311:1:exon
so has part: feature:1146467-1146666:1:exon
so has part: feature:1146779-1147098:1:exon

XP_055648147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132150-1132156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133293-1133387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1134076-1135260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1135360-1135561:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146143-1146311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1146467-1146666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1146779-1147098:1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: SP1
product: Sp1 transcription factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055792171.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(1132903..1133387,1133636..1133767,1134076..1135561,1146143..1146311,1146467..1146666,1146779..1150744)
location: region:1132903-1150744:1
so has part: feature:1132903-1133387:1:exon
so has part: feature:1133636-1133767:1:exon
so has part: feature:1134076-1135561:1:exon
so has part: feature:1146143-1146311:1:exon
so has part: feature:1146467-1146666:1:exon
so has part: feature:1146779-1150744:1:exon

position:1132903:1
position: 1132903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132903-1133387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133636-1133767:1:exon

position:1133636:1
position: 1133636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133767:1
position: 1133767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1134076-1135561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146143-1146311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146467-1146666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1146779-1150744:1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8954
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X2
translation: MPRDNCTSPGLFSCGEESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLTAAAAQIAQSANGWQIISAGSSTPTASKEQGSNGGDASKSRPVSAGQYVVTTASNLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTSAQVNVQQDASGQLQIIPGTNQQIITSRAGTSNLIAMPNLLQQAVPIQGVGLANNTLSGQTQYVANVPVALNGNITLLPVNSVATSLAPTSQTVTLSSSGSPDSSSQPATSGTAISSTNTATSHASSSAYFTNANSYSTTTTTSNMGIMNFSTSTTVGTNVQAQTPQRVSSVQSSDSLQSQVSGVALQPGQQKEGDQSQQSQQQQQILIQPQLVQGGQAIQALQTTPLSGQTFATQAISQDALQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSMPGLQTINLSALGASGIQVHQLQGLPLAIANTAGDHSTQLGLHGTSGDGLGDENAAVEEGETSPDPQPQQGRKVRREACTCPYCKDSEGRSSGDPGKKKQHICHIPGCGKVYGKTSHLRAHLRWHTGERPFVCTWILCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGAANNVAMNVSAVPMDTGASAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(1133720..1133767,1134076..1135561,1146143..1146311,1146467..1146666,1146779..1147098)
location: region:1133720-1147098:1
so has part: feature:1133720-1133767:1:exon
so has part: feature:1134076-1135561:1:exon
so has part: feature:1146143-1146311:1:exon
so has part: feature:1146467-1146666:1:exon
so has part: feature:1146779-1147098:1:exon

XP_055648146.1
type: Protein
SIO_000068: ncbiprotein

position:1133720:1
position: 1133720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133720-1133767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1134076-1135561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146143-1146311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146467-1146666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146779-1147098:1:exon

AMHR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8954
gene: AMHR2
note: anti-Mullerian hormone receptor type 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1152905..1157982
location: region:1152905-1157982:1
so has part: feature:1152905-1157982:1:exon
subclass of: SO_0000010

101921553
type: Gene
SIO_000068: ncbigene

position:1152905:1
position: 1152905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157982:1
position: 1157982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152905-1157982:1:exon

AMHR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8954
gene: AMHR2
product: anti-Mullerian hormone receptor type 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_055792386.1
SIO_010081: AMHR2
subclass of: SO_0000673
so part of: AMHR2
location: join(1152905..1153055,1153542..1153768,1154511..1154625,1154715..1154871,1155425..1155572,1155646..1155783,1156545..1156682,1157593..1157632,1157900..1157982)
location: region:1152905-1157982:1
so has part: feature:1152905-1153055:1:exon
so has part: feature:1153542-1153768:1:exon
so has part: feature:1154511-1154625:1:exon
so has part: feature:1154715-1154871:1:exon
so has part: feature:1155425-1155572:1:exon
so has part: feature:1155646-1155783:1:exon
so has part: feature:1156545-1156682:1:exon
so has part: feature:1157593-1157632:1:exon
so has part: feature:1157900-1157982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152905-1153055:1:exon

position:1153055:1
position: 1153055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153542-1153768:1:exon

position:1153542:1
position: 1153542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153768:1
position: 1153768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1154511-1154625:1:exon

position:1154511:1
position: 1154511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154625:1
position: 1154625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1154715-1154871:1:exon

position:1154715:1
position: 1154715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154871:1
position: 1154871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1155425-1155572:1:exon

position:1155425:1
position: 1155425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155572:1
position: 1155572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1155646-1155783:1:exon

position:1155646:1
position: 1155646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155783:1
position: 1155783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1156545-1156682:1:exon

position:1156545:1
position: 1156545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156682:1
position: 1156682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1157593-1157632:1:exon

position:1157593:1
position: 1157593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157632:1
position: 1157632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1157900-1157982:1:exon