Bubalus bubalis isolate 160015118507 breed Murrah chromosome 19, NDDB_SH_1, whole genome shotgun sequence.
type: Entry
definition: Bubalus bubalis isolate 160015118507 breed Murrah chromosome 19, NDDB_SH_1, whole genome shotgun sequence.
sequence version: NC_059175.1
sequence date: 2021-11-17
sequence: sequence
division: CON
label: NC_059175.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA779724
dblink: SAMN11104991
keyword: WGS
keyword: RefSeq
source: Bubalus bubalis (water buffalo)
organism: Bubalus bubalis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM034289.1.\nAssembly name: NDDB_SH_1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the National Dairy Development\nBoard, India on 2021/09/10. The original whole-genome shotgun\nproject has the accession VDCB00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: National Dairy Development Board, India\nAssembly Date :: 25-FEB-2019\nAssembly Method :: Falcon+Scaff10X+BioNano v. 2019-02-25\nAssembly Name :: NDDB_SH_1\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 572.0x\nSequencing Technology :: PacBio Sequel; 10X and BioNano Optical\n Map\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Bubalus bubalis Annotation Release\n 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 71582194
topology: linear
so has quality: SO_0000987
location: 1..71582194
location: region:1-71582194:1
RO_0002162: 89462

NC_059175
type: RefSeq
SIO_000068: refseq

PRJNA779724
type: BioProject
SIO_000068: bioproject

SAMN11104991
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71582194:1
position: 71582194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-71582194:1:source
so part of: sequence
organism: Bubalus bubalis
mol type: genomic DNA
isolate: 160015118507
chromosome: 19
sex: female
tissue type: blood
dev stage: Adult Heifer
country: India: Hissar, Haryana
breed: Murrah

89462
type: Taxonomy
SIO_000068: taxonomy

LOC123330535
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(49..4070)
location: region:49-4070:-1
so has part: feature:49-4070:-1:exon
subclass of: SO_0000010

123330535
type: Gene
SIO_000068: ncbigene

position:49:-1
position: 49
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4070:-1
position: 4070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49-4070:-1:exon

LOC123330535
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89462
gene: LOC123330535
product: S-antigen protein, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546527.2
SIO_010081: LOC123330535
so part of: LOC123330535
location: complement(join(49..1061,1777..1843,3734..4070))
location: region:49-4070:-1
so has part: feature:3734-4070:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:49-1061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3734-4070:-1:exon

position:3734:-1
position: 3734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

position:1777:-1
position: 1777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843:-1
position: 1843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49-1061:-1:exon

position:1061:-1
position: 1061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123330535
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89462
gene: LOC123330535
product: S-antigen protein, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546531.2
SIO_010081: LOC123330535
so part of: LOC123330535
location: complement(join(49..1061,1777..1843,3364..3727))
location: region:49-3727:-1
so has part: feature:3364-3727:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:49-1061:-1:exon

position:3727:-1
position: 3727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3364-3727:-1:exon

position:3364:-1
position: 3364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49-1061:-1:exon

LOC123330535
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89462
gene: LOC123330535
product: S-antigen protein, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546528.2
SIO_010081: LOC123330535
so part of: LOC123330535
location: complement(join(49..1061,1777..1843,2966..3206))
location: region:49-3206:-1
so has part: feature:2966-3206:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:49-1061:-1:exon

position:3206:-1
position: 3206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2966-3206:-1:exon

position:2966:-1
position: 2966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49-1061:-1:exon

LOC123330535
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89462
gene: LOC123330535
product: S-antigen protein, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546526.2
SIO_010081: LOC123330535
so part of: LOC123330535
location: complement(join(49..1061,1777..1843,3065..3199))
location: region:49-3199:-1
so has part: feature:3065-3199:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:49-1061:-1:exon

position:3199:-1
position: 3199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3065-3199:-1:exon

position:3065:-1
position: 3065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49-1061:-1:exon

LOC123330535
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89462
gene: LOC123330535
product: S-antigen protein, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546530.2
SIO_010081: LOC123330535
so part of: LOC123330535
location: complement(join(49..1061,1777..1843,2861..2922))
location: region:49-2922:-1
so has part: feature:2861-2922:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:49-1061:-1:exon

position:2922:-1
position: 2922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2861-2922:-1:exon

position:2861:-1
position: 2861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49-1061:-1:exon

LOC123330535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LOC123330535
product: S-antigen protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932420.2
SIO_010081: LOC123330535
subclass of: SO_0000673
so part of: LOC123330535
location: complement(join(49..1061,1777..1843,2435..2854))
location: region:49-2854:-1
so has part: feature:2435-2854:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:49-1061:-1:exon

position:2854:-1
position: 2854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2435-2854:-1:exon

position:2435:-1
position: 2435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49-1061:-1:exon

LOC123330535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LOC123330535
product: S-antigen protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932419.2
SIO_010081: LOC123330535
subclass of: SO_0000673
so part of: LOC123330535
location: complement(join(49..1061,1777..1843,2384..2854))
location: region:49-2854:-1
so has part: feature:2384-2854:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:49-1061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2384-2854:-1:exon

position:2384:-1
position: 2384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49-1061:-1:exon

LOC123330535
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89462
gene: LOC123330535
product: S-antigen protein, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546529.2
SIO_010081: LOC123330535
so part of: LOC123330535
location: complement(join(49..1061,1777..1843,2260..2428))
location: region:49-2428:-1
so has part: feature:2260-2428:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:49-1061:-1:exon

position:2428:-1
position: 2428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2260-2428:-1:exon

position:2260:-1
position: 2260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49-1061:-1:exon

LOC123330535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LOC123330535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-antigen protein isoform X2
translation: MGAQGPGWAAPRPTGGSEARGPRGSGWRRVRKPDTSGPHGPEQRTGSGEARFAERSRAWRGPGWEGTETSAPLSPPPRPRTHARTPGMPLGVLEALRAAEPGQAFAGHGAAVFGGVAALAGRSLVAGPSAQAAWRERRGWILLQSGLAPDVLRVYLHEFSRCLYSIQYTTKTTF
SIO_010081: LOC123330535
subclass of: SO_0000673
so part of: LOC123330535
location: complement(join(997..1061,1777..1843,2435..2827))
location: region:997-2827:-1
so has part: feature:2435-2827:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:997-1061:-1:exon

XP_044788355.1
type: Protein
SIO_000068: ncbiprotein

position:997:-1
position: 997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2827:-1
position: 2827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2435-2827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:997-1061:-1:exon

LOC123330535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LOC123330535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC123330535 isoform X1
translation: MGAQGPGWAAPRPTGGSEARGPRGSGWRRVRKPDTSGPHGPEQRTGSGEARFAERSRAWRGPGWEGTETSAPLSPPPRPRTHARTPGMPLGVLEALRAAEPGQAFAGHGAAVFGGVAALAGRSLVAGPSAQVQRAPPWRGAAGWPDRQAAWRERRGWILLQSGLAPDVLRVYLHEFSRCLYSIQYTTKTTF
SIO_010081: LOC123330535
subclass of: SO_0000673
so part of: LOC123330535
location: complement(join(997..1061,1777..1843,2384..2827))
location: region:997-2827:-1
so has part: feature:2384-2827:-1:exon
so has part: feature:1777-1843:-1:exon
so has part: feature:997-1061:-1:exon

XP_044788354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2384-2827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1777-1843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:997-1061:-1:exon

LOC112582873
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112582873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3433..4189
location: region:3433-4189:1
so has part: feature:3433-4189:1:exon
subclass of: SO_0000011

112582873
type: Gene
SIO_000068: ncbigene

position:3433:1
position: 3433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4189:1
position: 4189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3433-4189:1:exon

LOC112582873
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC112582873
product: uncharacterized LOC112582873
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_003107207.3
SIO_010081: LOC112582873
subclass of: SO_0000673
so part of: LOC112582873
location: join(3433..3564,4065..4189)
location: region:3433-4189:1
so has part: feature:3433-3564:1:exon
so has part: feature:4065-4189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3433-3564:1:exon

position:3564:1
position: 3564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4065-4189:1:exon

position:4065:1
position: 4065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123329537
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123329537
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(6653..6771)
location: region:6653-6771:-1
so has part: feature:6653-6771:-1:exon

123329537
type: Gene
SIO_000068: ncbigene

position:6653:-1
position: 6653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6771:-1
position: 6771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6653-6771:-1:exon

LOC123329537
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC123329537
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123329537
subclass of: SO_0000673
so part of: LOC123329537
location: complement(6653..6771)
location: region:6653-6771:-1
so has part: feature:6653-6771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6653-6771:-1:exon

LOC123330660
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10729..16543
location: region:10729-16543:1
so has part: feature:10729-16543:1:exon

123330660
type: Gene
SIO_000068: ncbigene

position:10729:1
position: 10729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16543:1
position: 16543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10729-16543:1:exon

LOC123330660
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC123330660
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123330660
subclass of: SO_0000673
so part of: LOC123330660
location: 10729..10739
location: region:10729-10739:1
so has part: feature:10729-10739:1:exon

position:10739:1
position: 10739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10729-10739:1:exon

LOC123330660
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC123330660
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123330660
subclass of: SO_0000673
so part of: LOC123330660
location: 15345..16543
location: region:15345-16543:1
so has part: feature:15345-16543:1:exon

position:15345:1
position: 15345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15345-16543:1:exon

LOC123329376
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123329376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 28782..29968
location: region:28782-29968:1
so has part: feature:28782-29968:1:exon

123329376
type: Gene
SIO_000068: ncbigene

position:28782:1
position: 28782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29968:1
position: 29968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28782-29968:1:exon

LOC123329376
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC123329376
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123329376
subclass of: SO_0000673
so part of: LOC123329376
location: 28782..28938
location: region:28782-28938:1
so has part: feature:28782-28938:1:exon

position:28938:1
position: 28938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28782-28938:1:exon

LOC123329376
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC123329376
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123329376
subclass of: SO_0000673
so part of: LOC123329376
location: 29244..29968
location: region:29244-29968:1
so has part: feature:29244-29968:1:exon

position:29244:1
position: 29244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29244-29968:1:exon

LOC112580702
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112580702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(32257..33347)
location: region:32257-33347:-1
so has part: feature:32257-33347:-1:exon

112580702
type: Gene
SIO_000068: ncbigene

position:32257:-1
position: 32257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33347:-1
position: 33347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32257-33347:-1:exon

LOC112580702
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC112580702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112580702
subclass of: SO_0000673
so part of: LOC112580702
location: complement(32257..33347)
location: region:32257-33347:-1
so has part: feature:32257-33347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32257-33347:-1:exon

LOC102413020
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC102413020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(35993..36924)
location: region:35993-36924:-1
so has part: feature:35993-36924:-1:exon

102413020
type: Gene
SIO_000068: ncbigene

position:35993:-1
position: 35993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36924:-1
position: 36924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35993-36924:-1:exon

LOC102413020
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102413020
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102413020
subclass of: SO_0000673
so part of: LOC102413020
location: complement(35993..36924)
location: region:35993-36924:-1
so has part: feature:35993-36924:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35993-36924:-1:exon

LOC102393696
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC102393696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(40752..41692)
location: region:40752-41692:-1
so has part: feature:40752-41692:-1:exon

102393696
type: Gene
SIO_000068: ncbigene

position:40752:-1
position: 40752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41692:-1
position: 41692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40752-41692:-1:exon

LOC102393696
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102393696
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102393696
subclass of: SO_0000673
so part of: LOC102393696
location: complement(40752..41692)
location: region:40752-41692:-1
so has part: feature:40752-41692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40752-41692:-1:exon

LOC123330640
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(59930..61048)
location: region:59930-61048:-1
so has part: feature:59930-61048:-1:exon

123330640
type: Gene
SIO_000068: ncbigene

position:59930:-1
position: 59930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61048:-1
position: 61048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59930-61048:-1:exon

LOC123330640
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC123330640
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123330640
subclass of: SO_0000673
so part of: LOC123330640
location: complement(59930..61048)
location: region:59930-61048:-1
so has part: feature:59930-61048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59930-61048:-1:exon

SPZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: SPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 88518..90722
location: region:88518-90722:1
so has part: feature:88518-90722:1:exon
subclass of: SO_0000010

102413981
type: Gene
SIO_000068: ncbigene

position:88518:1
position: 88518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90722:1
position: 90722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88518-90722:1:exon

SPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SPZ1
product: spermatogenic leucine zipper 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044932644.2
SIO_010081: SPZ1
subclass of: SO_0000673
so part of: SPZ1
location: 88518..90722
location: region:88518-90722:1
so has part: feature:88518-90722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88518-90722:1:exon

SPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenic leucine zipper protein 1
translation: MEVPTLSKTLKPPDLNEESLDPRIMIALFEIGSISPVSCSSLPSLKSSDHEAIEQRIAKKFESLLKEIKDIVKHVTSYEQKVTETKEPFKETNMFEVSELREKIIELDEINKELVKKLLASSDLGKKENAKKQEMRLDNQNSEDTVQDCSGDLLNCSKGQKALPETQLSKEKAKHGFPHIQEENIRLRNNMERLLQEAEHWSVEHTELSKLIKSYQKSQNDIKTLKNNGTHSPTQTNNESAKQELEEQVKRLKEDTYSLHLIATLLENECQILEQRVELLDELHHQKEEPQQGEPMQINHEQSDREQKLPEAEKVKIHEKNMPEVEGTFHKRDQFFTSLDICHNKKAHNNKFNTRIAKRALVVKRPASSLS
SIO_010081: SPZ1
subclass of: SO_0000673
so part of: SPZ1
location: 88929..90044
location: region:88929-90044:1
so has part: feature:88929-90044:1:exon

XP_044788579.1
type: Protein
SIO_000068: ncbiprotein

position:88929:1
position: 88929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90044:1
position: 90044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88929-90044:1:exon

PANK3
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: PANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(116800..140064)
location: region:116800-140064:-1
so has part: feature:116800-140064:-1:exon
subclass of: SO_0000010

102414318
type: Gene
SIO_000068: ncbigene

position:116800:-1
position: 116800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140064:-1
position: 140064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116800-140064:-1:exon

PANK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: PANK3
product: pantothenate kinase 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006075511.4
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: complement(join(116800..119510,120894..121019,125706..125829,126784..126960,128947..129200,133313..133665,139840..140060))
location: region:116800-140060:-1
so has part: feature:139840-140060:-1:exon
so has part: feature:133313-133665:-1:exon
so has part: feature:128947-129200:-1:exon
so has part: feature:126784-126960:-1:exon
so has part: feature:125706-125829:-1:exon
so has part: feature:120894-121019:-1:exon
so has part: feature:116800-119510:-1:exon

position:140060:-1
position: 140060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139840-140060:-1:exon

position:139840:-1
position: 139840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133313-133665:-1:exon

position:133313:-1
position: 133313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133665:-1
position: 133665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128947-129200:-1:exon

position:128947:-1
position: 128947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129200:-1
position: 129200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126784-126960:-1:exon

position:126784:-1
position: 126784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126960:-1
position: 126960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:125706-125829:-1:exon

position:125706:-1
position: 125706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125829:-1
position: 125829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120894-121019:-1:exon

position:120894:-1
position: 120894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121019:-1
position: 121019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:116800-119510:-1:exon

position:119510:-1
position: 119510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: PANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pantothenate kinase 3
translation: MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLHTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSMLAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSIARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPNFS
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: complement(join(119460..119510,120894..121019,125706..125829,126784..126960,128947..129200,133313..133665,139840..139867))
location: region:119460-139867:-1
so has part: feature:139840-139867:-1:exon
so has part: feature:133313-133665:-1:exon
so has part: feature:128947-129200:-1:exon
so has part: feature:126784-126960:-1:exon
so has part: feature:125706-125829:-1:exon
so has part: feature:120894-121019:-1:exon
so has part: feature:119460-119510:-1:exon

XP_006075573.1
type: Protein
SIO_000068: ncbiprotein

position:119460:-1
position: 119460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139867:-1
position: 139867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139840-139867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133313-133665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128947-129200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126784-126960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125706-125829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120894-121019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119460-119510:-1:exon

PANK3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89462
gene: PANK3
product: pantothenate kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XR_003105009.2
SIO_010081: PANK3
so part of: PANK3
location: complement(join(119487..119510,120894..121019,126784..126960,128947..129200,133313..133665,139840..140064))
location: region:119487-140064:-1
so has part: feature:139840-140064:-1:exon
so has part: feature:133313-133665:-1:exon
so has part: feature:128947-129200:-1:exon
so has part: feature:126784-126960:-1:exon
so has part: feature:120894-121019:-1:exon
so has part: feature:119487-119510:-1:exon

position:119487:-1
position: 119487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139840-140064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133313-133665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128947-129200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126784-126960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120894-121019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119487-119510:-1:exon

SLIT3
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: SLIT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(255088..984846)
location: region:255088-984846:-1
so has part: feature:255088-984846:-1:exon
subclass of: SO_0000010

102414878
type: Gene
SIO_000068: ncbigene

position:255088:-1
position: 255088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984846:-1
position: 984846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255088-984846:-1:exon

SLIT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SLIT3
product: slit guidance ligand 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932473.2
SIO_010081: SLIT3
subclass of: SO_0000673
so part of: SLIT3
location: complement(join(255088..255501,258104..258312,259553..259838,260469..260623,276407..276537,278525..278765,280246..280383,287475..287568,289661..289800,293543..293640,301395..301519,303502..303665,306015..306086,315646..315717,316520..316591,318454..318522,343460..343592,344757..344920,348012..348155,348997..349140,356478..356552,357747..357897,369302..369465,370875..371018,386236..386307,389904..389975,395992..396063,409325..409466,419227..419390,426712..426783,451450..451521,497601..497672,850857..850928,919278..919349,927694..927765,984514..984846))
location: region:255088-984846:-1
so has part: feature:984514-984846:-1:exon
so has part: feature:927694-927765:-1:exon
so has part: feature:919278-919349:-1:exon
so has part: feature:850857-850928:-1:exon
so has part: feature:497601-497672:-1:exon
so has part: feature:451450-451521:-1:exon
so has part: feature:426712-426783:-1:exon
so has part: feature:419227-419390:-1:exon
so has part: feature:409325-409466:-1:exon
so has part: feature:395992-396063:-1:exon
so has part: feature:389904-389975:-1:exon
so has part: feature:386236-386307:-1:exon
so has part: feature:370875-371018:-1:exon
so has part: feature:369302-369465:-1:exon
so has part: feature:357747-357897:-1:exon
so has part: feature:356478-356552:-1:exon
so has part: feature:348997-349140:-1:exon
so has part: feature:348012-348155:-1:exon
so has part: feature:344757-344920:-1:exon
so has part: feature:343460-343592:-1:exon
so has part: feature:318454-318522:-1:exon
so has part: feature:316520-316591:-1:exon
so has part: feature:315646-315717:-1:exon
so has part: feature:306015-306086:-1:exon
so has part: feature:303502-303665:-1:exon
so has part: feature:301395-301519:-1:exon
so has part: feature:293543-293640:-1:exon
so has part: feature:289661-289800:-1:exon
so has part: feature:287475-287568:-1:exon
so has part: feature:280246-280383:-1:exon
so has part: feature:278525-278765:-1:exon
so has part: feature:276407-276537:-1:exon
so has part: feature:260469-260623:-1:exon
so has part: feature:259553-259838:-1:exon
so has part: feature:258104-258312:-1:exon
so has part: feature:255088-255501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:984514-984846:-1:exon

position:984514:-1
position: 984514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927694-927765:-1:exon

position:927694:-1
position: 927694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927765:-1
position: 927765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919278-919349:-1:exon

position:919278:-1
position: 919278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919349:-1
position: 919349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:850857-850928:-1:exon

position:850857:-1
position: 850857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850928:-1
position: 850928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:497601-497672:-1:exon

position:497601:-1
position: 497601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497672:-1
position: 497672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451450-451521:-1:exon

position:451450:-1
position: 451450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451521:-1
position: 451521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:426712-426783:-1:exon

position:426712:-1
position: 426712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426783:-1
position: 426783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:419227-419390:-1:exon

position:419227:-1
position: 419227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419390:-1
position: 419390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:409325-409466:-1:exon

position:409325:-1
position: 409325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409466:-1
position: 409466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:395992-396063:-1:exon

position:395992:-1
position: 395992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396063:-1
position: 396063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:389904-389975:-1:exon

position:389904:-1
position: 389904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389975:-1
position: 389975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:386236-386307:-1:exon

position:386236:-1
position: 386236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386307:-1
position: 386307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:370875-371018:-1:exon

position:370875:-1
position: 370875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371018:-1
position: 371018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:369302-369465:-1:exon

position:369302:-1
position: 369302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369465:-1
position: 369465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:357747-357897:-1:exon

position:357747:-1
position: 357747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357897:-1
position: 357897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:356478-356552:-1:exon

position:356478:-1
position: 356478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356552:-1
position: 356552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:348997-349140:-1:exon

position:348997:-1
position: 348997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349140:-1
position: 349140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:348012-348155:-1:exon

position:348012:-1
position: 348012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348155:-1
position: 348155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:344757-344920:-1:exon

position:344757:-1
position: 344757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344920:-1
position: 344920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:343460-343592:-1:exon

position:343460:-1
position: 343460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343592:-1
position: 343592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:318454-318522:-1:exon

position:318454:-1
position: 318454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318522:-1
position: 318522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:316520-316591:-1:exon

position:316520:-1
position: 316520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316591:-1
position: 316591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:315646-315717:-1:exon

position:315646:-1
position: 315646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315717:-1
position: 315717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:306015-306086:-1:exon

position:306015:-1
position: 306015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306086:-1
position: 306086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:303502-303665:-1:exon

position:303502:-1
position: 303502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303665:-1
position: 303665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:301395-301519:-1:exon

position:301395:-1
position: 301395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301519:-1
position: 301519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:293543-293640:-1:exon

position:293543:-1
position: 293543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293640:-1
position: 293640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:289661-289800:-1:exon

position:289661:-1
position: 289661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289800:-1
position: 289800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:287475-287568:-1:exon

position:287475:-1
position: 287475
reference: sequence
type: ReverseStrandPosition
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position:287568:-1
position: 287568
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:280246-280383:-1:exon

position:280246:-1
position: 280246
reference: sequence
type: ReverseStrandPosition
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position:280383:-1
position: 280383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:278525-278765:-1:exon

position:278525:-1
position: 278525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278765:-1
position: 278765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:276407-276537:-1:exon

position:276407:-1
position: 276407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276537:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 33
SIO_000628: feature:260469-260623:-1:exon

position:260469:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260623:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 34
SIO_000628: feature:259553-259838:-1:exon

position:259553:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259838:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:258104-258312:-1:exon

position:258104:-1
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reference: sequence
type: ReverseStrandPosition
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position:258312:-1
position: 258312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:255088-255501:-1:exon

position:255501:-1
position: 255501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLIT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SLIT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: slit homolog 3 protein isoform X1
translation: MAPGRTGAGAAVRARLMLALALASVLSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKTDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSNLKLTRLDLSENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFNVADVQKKEYVCPGPHSEPPACNANSISCPSACTCSNNIVDCRGKGLTEIPTNLPEGIVEIRLEQNSIRSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARVPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAASVQELVLTGNQLETTHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNDESSCQLGPRCPEQCTCVETVVRCSNRGLRALPKGIPKDVTELYLEGNHLTAVPRELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLMSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDIGIVAKCDPCLSSPCKNNGTCSQDPVEGHRCACPHGYKGRDCTVPINTCIQNPCLHGGTCHLSETHKGGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGVNNYVCVCPPNFTGELCDEVIDHCVPGMNLCQHEAKCISLDRGFRCECPPGYSGKLCEVNNDDCTAHRCRHGAQCVDAANGYTCICPQGFSGLHCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGLLLYKGDNDPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVSINSPLYLGGIPTSTGLSALRQGMDRQLGGFHGCIHEVRINNELQDFKALPPQALGVSPGCKSCSVCRHGLCRAVEKDSVVCECHPGWTGPLCDQEARNPCLGHSCIQGKCVASGTSYVCRCTEGYGGALCDQKNDSSSACSTFKCHQGQCHISDRGEPYCLCQPGFSGEHCEEETPCLGEVVREVIRRQKGYASCATASKIPVMECRGGCGPQCCQPTRSKRRKYVFQCTDGSSFVEELERHLECACRPCS
SIO_010081: SLIT3
subclass of: SO_0000673
so part of: SLIT3
location: complement(join(255266..255501,258104..258312,259553..259838,260469..260623,276407..276537,278525..278765,280246..280383,287475..287568,289661..289800,293543..293640,301395..301519,303502..303665,306015..306086,315646..315717,316520..316591,318454..318522,343460..343592,344757..344920,348012..348155,348997..349140,356478..356552,357747..357897,369302..369465,370875..371018,386236..386307,389904..389975,395992..396063,409325..409466,419227..419390,426712..426783,451450..451521,497601..497672,850857..850928,919278..919349,927694..927765,984514..984710))
location: region:255266-984710:-1
so has part: feature:984514-984710:-1:exon
so has part: feature:927694-927765:-1:exon
so has part: feature:919278-919349:-1:exon
so has part: feature:850857-850928:-1:exon
so has part: feature:497601-497672:-1:exon
so has part: feature:451450-451521:-1:exon
so has part: feature:426712-426783:-1:exon
so has part: feature:419227-419390:-1:exon
so has part: feature:409325-409466:-1:exon
so has part: feature:395992-396063:-1:exon
so has part: feature:389904-389975:-1:exon
so has part: feature:386236-386307:-1:exon
so has part: feature:370875-371018:-1:exon
so has part: feature:369302-369465:-1:exon
so has part: feature:357747-357897:-1:exon
so has part: feature:356478-356552:-1:exon
so has part: feature:348997-349140:-1:exon
so has part: feature:348012-348155:-1:exon
so has part: feature:344757-344920:-1:exon
so has part: feature:343460-343592:-1:exon
so has part: feature:318454-318522:-1:exon
so has part: feature:316520-316591:-1:exon
so has part: feature:315646-315717:-1:exon
so has part: feature:306015-306086:-1:exon
so has part: feature:303502-303665:-1:exon
so has part: feature:301395-301519:-1:exon
so has part: feature:293543-293640:-1:exon
so has part: feature:289661-289800:-1:exon
so has part: feature:287475-287568:-1:exon
so has part: feature:280246-280383:-1:exon
so has part: feature:278525-278765:-1:exon
so has part: feature:276407-276537:-1:exon
so has part: feature:260469-260623:-1:exon
so has part: feature:259553-259838:-1:exon
so has part: feature:258104-258312:-1:exon
so has part: feature:255266-255501:-1:exon

XP_044788408.2
type: Protein
SIO_000068: ncbiprotein

position:255266:-1
position: 255266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984710:-1
position: 984710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984514-984710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927694-927765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919278-919349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850857-850928:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497601-497672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451450-451521:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426712-426783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:419227-419390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409325-409466:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395992-396063:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389904-389975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386236-386307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370875-371018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369302-369465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:357747-357897:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356478-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:348997-349140:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:348012-348155:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:344757-344920:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343460-343592:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:318454-318522:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:316520-316591:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:315646-315717:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:306015-306086:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:303502-303665:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:301395-301519:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:293543-293640:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:289661-289800:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:287475-287568:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:280246-280383:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:278525-278765:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:276407-276537:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:260469-260623:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:259553-259838:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:258104-258312:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:255266-255501:-1:exon

SLIT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SLIT3
product: slit guidance ligand 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_044932474.2
SIO_010081: SLIT3
subclass of: SO_0000673
so part of: SLIT3
location: complement(join(255377..255501,257746..257819,258104..258312,259553..259838,260469..260623,276407..276537,278525..278765,280246..280383,287475..287568,289661..289800,293543..293640,301395..301519,303502..303665,306015..306086,315646..315717,316520..316591,318454..318522,343460..343592,344757..344920,348012..348155,348997..349140,356478..356552,357747..357897,369302..369465,370875..371018,386236..386307,389904..389975,395992..396063,409325..409466,419227..419390,426712..426783,451450..451521,497601..497672,850857..850928,919278..919349,927694..927765,984514..984846))
location: region:255377-984846:-1
so has part: feature:984514-984846:-1:exon
so has part: feature:927694-927765:-1:exon
so has part: feature:919278-919349:-1:exon
so has part: feature:850857-850928:-1:exon
so has part: feature:497601-497672:-1:exon
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so has part: feature:426712-426783:-1:exon
so has part: feature:419227-419390:-1:exon
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so has part: feature:389904-389975:-1:exon
so has part: feature:386236-386307:-1:exon
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so has part: feature:369302-369465:-1:exon
so has part: feature:357747-357897:-1:exon
so has part: feature:356478-356552:-1:exon
so has part: feature:348997-349140:-1:exon
so has part: feature:348012-348155:-1:exon
so has part: feature:344757-344920:-1:exon
so has part: feature:343460-343592:-1:exon
so has part: feature:318454-318522:-1:exon
so has part: feature:316520-316591:-1:exon
so has part: feature:315646-315717:-1:exon
so has part: feature:306015-306086:-1:exon
so has part: feature:303502-303665:-1:exon
so has part: feature:301395-301519:-1:exon
so has part: feature:293543-293640:-1:exon
so has part: feature:289661-289800:-1:exon
so has part: feature:287475-287568:-1:exon
so has part: feature:280246-280383:-1:exon
so has part: feature:278525-278765:-1:exon
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so has part: feature:260469-260623:-1:exon
so has part: feature:259553-259838:-1:exon
so has part: feature:258104-258312:-1:exon
so has part: feature:257746-257819:-1:exon
so has part: feature:255377-255501:-1:exon

position:255377:-1
position: 255377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984514-984846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927694-927765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919278-919349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850857-850928:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497601-497672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451450-451521:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426712-426783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:419227-419390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409325-409466:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395992-396063:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389904-389975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386236-386307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370875-371018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369302-369465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:357747-357897:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356478-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:348997-349140:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:348012-348155:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:344757-344920:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343460-343592:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:318454-318522:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:316520-316591:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:315646-315717:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:306015-306086:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:303502-303665:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:301395-301519:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:293543-293640:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:289661-289800:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:287475-287568:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:280246-280383:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:278525-278765:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:276407-276537:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:260469-260623:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:259553-259838:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:258104-258312:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:257746-257819:-1:exon

position:257746:-1
position: 257746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257819:-1
position: 257819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:255377-255501:-1:exon

SLIT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SLIT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: slit homolog 3 protein isoform X2
translation: MAPGRTGAGAAVRARLMLALALASVLSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKTDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSNLKLTRLDLSENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFNVADVQKKEYVCPGPHSEPPACNANSISCPSACTCSNNIVDCRGKGLTEIPTNLPEGIVEIRLEQNSIRSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARVPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAASVQELVLTGNQLETTHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNDESSCQLGPRCPEQCTCVETVVRCSNRGLRALPKGIPKDVTELYLEGNHLTAVPRELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLMSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDIGIVAKCDPCLSSPCKNNGTCSQDPVEGHRCACPHGYKGRDCTVPINTCIQNPCLHGGTCHLSETHKGGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGVNNYVCVCPPNFTGELCDEVIDHCVPGMNLCQHEAKCISLDRGFRCECPPGYSGKLCEVNNDDCTAHRCRHGAQCVDAANGYTCICPQGFSGLHCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGLLLYKGDNDPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVSINSPLYLGGIPTSTGLSALRQGMDRQLGGFHGCIHEVRINNELQDFKALPPQALGVSPGCKSCSVCRHGLCRAVEKDSVVCECHPGWTGPLCDQEARNPCLGHSCIQGKCVASGTSYVCRCTEGYGGALCDQKNDSSSACSTFKCHQGQCHISDRGEPYCLCQPGFSGEHCEEGQRFRNSLATLRDPN
SIO_010081: SLIT3
subclass of: SO_0000673
so part of: SLIT3
location: complement(join(257773..257819,258104..258312,259553..259838,260469..260623,276407..276537,278525..278765,280246..280383,287475..287568,289661..289800,293543..293640,301395..301519,303502..303665,306015..306086,315646..315717,316520..316591,318454..318522,343460..343592,344757..344920,348012..348155,348997..349140,356478..356552,357747..357897,369302..369465,370875..371018,386236..386307,389904..389975,395992..396063,409325..409466,419227..419390,426712..426783,451450..451521,497601..497672,850857..850928,919278..919349,927694..927765,984514..984710))
location: region:257773-984710:-1
so has part: feature:984514-984710:-1:exon
so has part: feature:927694-927765:-1:exon
so has part: feature:919278-919349:-1:exon
so has part: feature:850857-850928:-1:exon
so has part: feature:497601-497672:-1:exon
so has part: feature:451450-451521:-1:exon
so has part: feature:426712-426783:-1:exon
so has part: feature:419227-419390:-1:exon
so has part: feature:409325-409466:-1:exon
so has part: feature:395992-396063:-1:exon
so has part: feature:389904-389975:-1:exon
so has part: feature:386236-386307:-1:exon
so has part: feature:370875-371018:-1:exon
so has part: feature:369302-369465:-1:exon
so has part: feature:357747-357897:-1:exon
so has part: feature:356478-356552:-1:exon
so has part: feature:348997-349140:-1:exon
so has part: feature:348012-348155:-1:exon
so has part: feature:344757-344920:-1:exon
so has part: feature:343460-343592:-1:exon
so has part: feature:318454-318522:-1:exon
so has part: feature:316520-316591:-1:exon
so has part: feature:315646-315717:-1:exon
so has part: feature:306015-306086:-1:exon
so has part: feature:303502-303665:-1:exon
so has part: feature:301395-301519:-1:exon
so has part: feature:293543-293640:-1:exon
so has part: feature:289661-289800:-1:exon
so has part: feature:287475-287568:-1:exon
so has part: feature:280246-280383:-1:exon
so has part: feature:278525-278765:-1:exon
so has part: feature:276407-276537:-1:exon
so has part: feature:260469-260623:-1:exon
so has part: feature:259553-259838:-1:exon
so has part: feature:258104-258312:-1:exon
so has part: feature:257773-257819:-1:exon

XP_044788409.2
type: Protein
SIO_000068: ncbiprotein

position:257773:-1
position: 257773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984514-984710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927694-927765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919278-919349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850857-850928:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497601-497672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451450-451521:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426712-426783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:419227-419390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409325-409466:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395992-396063:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389904-389975:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386236-386307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370875-371018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369302-369465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:357747-357897:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356478-356552:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:348997-349140:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:348012-348155:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:344757-344920:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343460-343592:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:318454-318522:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:316520-316591:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:315646-315717:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:306015-306086:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:303502-303665:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:301395-301519:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:293543-293640:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:289661-289800:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:287475-287568:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:280246-280383:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:278525-278765:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:276407-276537:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:260469-260623:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:259553-259838:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:258104-258312:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:257773-257819:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 601333..601404
location: region:601333-601404:1
so has part: feature:601333-601404:1:exon
subclass of: SO_0000663

123330668
type: Gene
SIO_000068: ncbigene

position:601333:1
position: 601333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601404:1
position: 601404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601333-601404:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 89462
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:601366..601368,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 601333..601404
location: region:601333-601404:1
so has part: feature:601333-601404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601333-601404:1:exon

LOC123465172
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123465172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1002237..1032088)
location: region:1002237-1032088:-1
so has part: feature:1002237-1032088:-1:exon
subclass of: SO_0000011

123465172
type: Gene
SIO_000068: ncbigene

position:1002237:-1
position: 1002237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032088:-1
position: 1032088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002237-1032088:-1:exon

LOC123465172
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123465172
product: uncharacterized LOC123465172, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006640304.1
SIO_010081: LOC123465172
subclass of: SO_0000673
so part of: LOC123465172
location: complement(join(1002237..1002295,1003491..1003671,1023343..1023470,1031347..1031455,1031879..1032088))
location: region:1002237-1032088:-1
so has part: feature:1031879-1032088:-1:exon
so has part: feature:1031347-1031455:-1:exon
so has part: feature:1023343-1023470:-1:exon
so has part: feature:1003491-1003671:-1:exon
so has part: feature:1002237-1002295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1031879-1032088:-1:exon

position:1031879:-1
position: 1031879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031347-1031455:-1:exon

position:1031347:-1
position: 1031347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031455:-1
position: 1031455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023343-1023470:-1:exon

position:1023343:-1
position: 1023343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023470:-1
position: 1023470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1003491-1003671:-1:exon

position:1003491:-1
position: 1003491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003671:-1
position: 1003671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1002237-1002295:-1:exon

position:1002295:-1
position: 1002295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123465172
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123465172
product: uncharacterized LOC123465172, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006640303.1
SIO_010081: LOC123465172
subclass of: SO_0000673
so part of: LOC123465172
location: complement(join(1026167..1027462,1031347..1031455,1031879..1032059))
location: region:1026167-1032059:-1
so has part: feature:1031879-1032059:-1:exon
so has part: feature:1031347-1031455:-1:exon
so has part: feature:1026167-1027462:-1:exon

position:1026167:-1
position: 1026167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032059:-1
position: 1032059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031879-1032059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1031347-1031455:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026167-1027462:-1:exon

position:1027462:-1
position: 1027462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112580673
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112580673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1206441..1296722)
location: region:1206441-1296722:-1
so has part: feature:1206441-1296722:-1:exon
subclass of: SO_0000010

112580673
type: Gene
SIO_000068: ncbigene

position:1206441:-1
position: 1206441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296722:-1
position: 1296722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206441-1296722:-1:exon

LOC112580673
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LOC112580673
product: uncharacterized LOC112580673
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932732.2
SIO_010081: LOC112580673
subclass of: SO_0000673
so part of: LOC112580673
location: complement(join(1206441..1207425,1294437..1294483,1296102..1296467,1296569..1296722))
location: region:1206441-1296722:-1
so has part: feature:1296569-1296722:-1:exon
so has part: feature:1296102-1296467:-1:exon
so has part: feature:1294437-1294483:-1:exon
so has part: feature:1206441-1207425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1296569-1296722:-1:exon

position:1296569:-1
position: 1296569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1296102-1296467:-1:exon

position:1296102:-1
position: 1296102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296467:-1
position: 1296467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1294437-1294483:-1:exon

position:1294437:-1
position: 1294437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294483:-1
position: 1294483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1206441-1207425:-1:exon

position:1207425:-1
position: 1207425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112580673
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LOC112580673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112580673
translation: MCHTAGRHTASADPVFVIPQTQATDPTFRIYAEFPGAVVAAQRNIRAGSEPGALLYAAPALPPSYAPPSGPLAPTFLSSPFSLLLQLSALRFPTLTPRRQRTITSPFTHQELGEAPGLFECNSRENSRHAILSALAWRKGKKREGTPKTVPRPSYGGFGAGSNVALCRVSITHGFGLTTPVKWLFSTSPKSTYLISVSLRIFPTKRPWIRMICIEQNPKQAKGMLAKHNSPGKNVCQGGLSVGCPNNWCALHSDEVSEDVSIMLVVIPQDTYKKSPDFMLFSLGREQYASFILRS
SIO_010081: LOC112580673
subclass of: SO_0000673
so part of: LOC112580673
location: complement(join(1207105..1207425,1294437..1294483,1296102..1296467,1296569..1296722))
location: region:1207105-1296722:-1
so has part: feature:1296569-1296722:-1:exon
so has part: feature:1296102-1296467:-1:exon
so has part: feature:1294437-1294483:-1:exon
so has part: feature:1207105-1207425:-1:exon

XP_044788667.2
type: Protein
SIO_000068: ncbiprotein

position:1207105:-1
position: 1207105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296569-1296722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296102-1296467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294437-1294483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1207105-1207425:-1:exon

SPDL1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1296187..1330121
location: region:1296187-1330121:1
so has part: feature:1296187-1330121:1:exon
subclass of: SO_0000010

102415653
type: Gene
SIO_000068: ncbigene

position:1296187:1
position: 1296187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1330121:1
position: 1330121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296187-1330121:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270813.3
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1296187..1296294,1305063..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1328390)
location: region:1296187-1328390:1
so has part: feature:1296187-1296294:1:exon
so has part: feature:1305063-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1328390:1:exon

position:1328390:1
position: 1328390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296187-1296294:1:exon

position:1296294:1
position: 1296294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305063-1305239:1:exon

position:1305063:1
position: 1305063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305239:1
position: 1305239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1306764-1306940:1:exon

position:1306764:1
position: 1306764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306940:1
position: 1306940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1311042-1311233:1:exon

position:1311042:1
position: 1311042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1311233:1
position: 1311233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1313554-1313703:1:exon

position:1313554:1
position: 1313554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313703:1
position: 1313703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1313804-1313902:1:exon

position:1313804:1
position: 1313804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313902:1
position: 1313902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1313979-1314089:1:exon

position:1313979:1
position: 1313979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314089:1
position: 1314089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1316222-1316362:1:exon

position:1316222:1
position: 1316222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316362:1
position: 1316362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1322372-1322475:1:exon

position:1322372:1
position: 1322372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322475:1
position: 1322475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1323217-1323404:1:exon

position:1323217:1
position: 1323217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323404:1
position: 1323404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1326705-1328390:1:exon

position:1326705:1
position: 1326705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270814.3
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1296187..1296294,1305066..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1328390)
location: region:1296187-1328390:1
so has part: feature:1296187-1296294:1:exon
so has part: feature:1305066-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1328390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1296187-1296294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305066-1305239:1:exon

position:1305066:1
position: 1305066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326705-1328390:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270810.3
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1296250..1296383,1305066..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1328390)
location: region:1296250-1328390:1
so has part: feature:1296250-1296383:1:exon
so has part: feature:1305066-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1328390:1:exon

position:1296250:1
position: 1296250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296250-1296383:1:exon

position:1296383:1
position: 1296383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305066-1305239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326705-1328390:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932383.2
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1296256..1296383,1305063..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1327047,1329447..1330121)
location: region:1296256-1330121:1
so has part: feature:1296256-1296383:1:exon
so has part: feature:1305063-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1327047:1:exon
so has part: feature:1329447-1330121:1:exon

position:1296256:1
position: 1296256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296256-1296383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305063-1305239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326705-1327047:1:exon

position:1327047:1
position: 1327047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1329447-1330121:1:exon

position:1329447:1
position: 1329447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270809.3
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1296261..1296383,1305063..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1328390)
location: region:1296261-1328390:1
so has part: feature:1296261-1296383:1:exon
so has part: feature:1305063-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1328390:1:exon

position:1296261:1
position: 1296261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296261-1296383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305063-1305239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326705-1328390:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270811.3
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1296284..1296422,1305063..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1328390)
location: region:1296284-1328390:1
so has part: feature:1296284-1296422:1:exon
so has part: feature:1305063-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1328390:1:exon

position:1296284:1
position: 1296284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296284-1296422:1:exon

position:1296422:1
position: 1296422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305063-1305239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326705-1328390:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270812.3
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1296289..1296422,1305066..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1328390)
location: region:1296289-1328390:1
so has part: feature:1296289-1296422:1:exon
so has part: feature:1305066-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1328390:1:exon

position:1296289:1
position: 1296289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296289-1296422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305066-1305239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326705-1328390:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X2
translation: MESDVIADLRCKLKETEEERRKAAQYGLQLVESQNELQNQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLSRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNANLMRQVDRLKGEKEEREKEAVSYYDALEKARVVNQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMESKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSQSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVGRSAPHGACATSAAGEEDHRRPPWEARAQSCSNGLEDNNSQLEKPVSVSTSGVILPPYKNLSMDIQPRKEKKCVKLIGVPADSEALSERSRNTPNSPRLAAESRLQREVKQGKETASKREKAACKKSYPTVYVSSKSTPETQCPQQ
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1305081..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1327047,1329447..1329594)
location: region:1305081-1329594:1
so has part: feature:1305081-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1327047:1:exon
so has part: feature:1329447-1329594:1:exon

XP_044788318.2
type: Protein
SIO_000068: ncbiprotein

position:1305081:1
position: 1305081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329594:1
position: 1329594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305081-1305239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326705-1327047:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1329447-1329594:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MESDVIADLRCKLKETEEERRKAAQYGLQLVESQNELQNQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLSRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNANLMRQVDRLKGEKEEREKEAVSYYDALEKARVVNQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMESKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSQSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVGRSAPHGACATSAAGEEDHRRPPWEARAQSCSNGLEDNNSQLEKPVSVSTSGVILPPYKNLSMDIQPRKEKKCVKLIGVPADSEALSERSRNTPNSPRSVSSLLQGSEQPSPSCLYRCMNCAVCFLIYFLSIVCSIIPQFHLPTFQFSKTLRKTKMIARGKDS
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1305081..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1327246)
location: region:1305081-1327246:1
so has part: feature:1305081-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1327246:1:exon

XP_025126594.3
type: Protein
SIO_000068: ncbiprotein

position:1327246:1
position: 1327246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305081-1305239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326705-1327246:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MESDVIADLRCKLKETEEERRKAAQYGLQLVESQNELQNQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLSRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNANLMRQVDRLKGEKEEREKEAVSYYDALEKARVVNQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMESKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSQSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVGRSAPHGACATSAAGEEDHRRPPWEARAQSCSNGLEDNNSQLEKPVSVSTSGVILPPYKNLSMDIQPRKEKKCVKLIGVPADSEALSERSRNTPNSPRSVSSLLQGSEQPSPSCLYRCMNCAVCFLIYFLSIVCSIIPQFHLPTFQFSKTLRKTKMIARGKDS
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1305081..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1327246)
location: region:1305081-1327246:1
so has part: feature:1305081-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1327246:1:exon

XP_025126595.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305081-1305239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326705-1327246:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MESDVIADLRCKLKETEEERRKAAQYGLQLVESQNELQNQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLSRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNANLMRQVDRLKGEKEEREKEAVSYYDALEKARVVNQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMESKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSQSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVGRSAPHGACATSAAGEEDHRRPPWEARAQSCSNGLEDNNSQLEKPVSVSTSGVILPPYKNLSMDIQPRKEKKCVKLIGVPADSEALSERSRNTPNSPRSVSSLLQGSEQPSPSCLYRCMNCAVCFLIYFLSIVCSIIPQFHLPTFQFSKTLRKTKMIARGKDS
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1305081..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1327246)
location: region:1305081-1327246:1
so has part: feature:1305081-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1327246:1:exon

XP_025126596.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305081-1305239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326705-1327246:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MESDVIADLRCKLKETEEERRKAAQYGLQLVESQNELQNQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLSRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNANLMRQVDRLKGEKEEREKEAVSYYDALEKARVVNQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMESKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSQSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVGRSAPHGACATSAAGEEDHRRPPWEARAQSCSNGLEDNNSQLEKPVSVSTSGVILPPYKNLSMDIQPRKEKKCVKLIGVPADSEALSERSRNTPNSPRSVSSLLQGSEQPSPSCLYRCMNCAVCFLIYFLSIVCSIIPQFHLPTFQFSKTLRKTKMIARGKDS
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1305081..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1327246)
location: region:1305081-1327246:1
so has part: feature:1305081-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1327246:1:exon

XP_025126597.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305081-1305239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326705-1327246:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MESDVIADLRCKLKETEEERRKAAQYGLQLVESQNELQNQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLSRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNANLMRQVDRLKGEKEEREKEAVSYYDALEKARVVNQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMESKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSQSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVGRSAPHGACATSAAGEEDHRRPPWEARAQSCSNGLEDNNSQLEKPVSVSTSGVILPPYKNLSMDIQPRKEKKCVKLIGVPADSEALSERSRNTPNSPRSVSSLLQGSEQPSPSCLYRCMNCAVCFLIYFLSIVCSIIPQFHLPTFQFSKTLRKTKMIARGKDS
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1305081..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1327246)
location: region:1305081-1327246:1
so has part: feature:1305081-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1327246:1:exon

XP_025126598.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305081-1305239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326705-1327246:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MESDVIADLRCKLKETEEERRKAAQYGLQLVESQNELQNQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLSRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNANLMRQVDRLKGEKEEREKEAVSYYDALEKARVVNQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMESKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSQSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVGRSAPHGACATSAAGEEDHRRPPWEARAQSCSNGLEDNNSQLEKPVSVSTSGVILPPYKNLSMDIQPRKEKKCVKLIGVPADSEALSERSRNTPNSPRSVSSLLQGSEQPSPSCLYRCMNCAVCFLIYFLSIVCSIIPQFHLPTFQFSKTLRKTKMIARGKDS
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1305081..1305239,1306764..1306940,1311042..1311233,1313554..1313703,1313804..1313902,1313979..1314089,1316222..1316362,1322372..1322475,1323217..1323404,1326705..1327246)
location: region:1305081-1327246:1
so has part: feature:1305081-1305239:1:exon
so has part: feature:1306764-1306940:1:exon
so has part: feature:1311042-1311233:1:exon
so has part: feature:1313554-1313703:1:exon
so has part: feature:1313804-1313902:1:exon
so has part: feature:1313979-1314089:1:exon
so has part: feature:1316222-1316362:1:exon
so has part: feature:1322372-1322475:1:exon
so has part: feature:1323217-1323404:1:exon
so has part: feature:1326705-1327246:1:exon

XP_025126599.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305081-1305239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306764-1306940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311042-1311233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1313554-1313703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1313804-1313902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313979-1314089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1316222-1316362:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1322372-1322475:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323217-1323404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326705-1327246:1:exon

LOC123330593
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1348999..1359071
location: region:1348999-1359071:1
so has part: feature:1348999-1359071:1:exon
subclass of: SO_0000011

123330593
type: Gene
SIO_000068: ncbigene

position:1348999:1
position: 1348999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359071:1
position: 1359071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348999-1359071:1:exon

LOC123330593
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330593
product: uncharacterized LOC123330593
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546615.1
SIO_010081: LOC123330593
subclass of: SO_0000673
so part of: LOC123330593
location: join(1348999..1349743,1356760..1356900,1358523..1359071)
location: region:1348999-1359071:1
so has part: feature:1348999-1349743:1:exon
so has part: feature:1356760-1356900:1:exon
so has part: feature:1358523-1359071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348999-1349743:1:exon

position:1349743:1
position: 1349743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1356760-1356900:1:exon

position:1356760:1
position: 1356760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356900:1
position: 1356900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1358523-1359071:1:exon

position:1358523:1
position: 1358523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DOCK2
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: DOCK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1364129..1821961
location: region:1364129-1821961:1
so has part: feature:1364129-1821961:1:exon
subclass of: SO_0000010

102389854
type: Gene
SIO_000068: ncbigene

position:1364129:1
position: 1364129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821961:1
position: 1821961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364129-1821961:1:exon

DOCK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: DOCK2
product: dedicator of cytokinesis 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_025270818.3
SIO_010081: DOCK2
subclass of: SO_0000673
so part of: DOCK2
location: join(1364129..1364473,1383817..1383900,1396066..1396106,1397229..1397284,1397742..1397838,1399568..1399716,1405553..1405688,1407692..1407846,1414791..1414872,1424776..1424911,1427258..1427333,1428289..1428365,1428943..1429068,1430277..1430401,1438865..1438963,1440640..1440712,1440833..1440936,1442890..1443073,1443245..1443342,1447345..1447434,1448562..1448662,1449458..1449592,1478685..1478793,1490543..1490613,1492694..1492800,1536437..1536585,1567921..1568016,1711971..1712069,1714923..1715017,1730877..1730955,1743485..1743585,1743681..1743739,1755098..1755246,1765225..1765310,1772586..1772742,1775126..1775166,1779214..1779304,1779946..1780065,1784655..1784744,1786500..1786604,1788359..1788500,1794347..1794428,1795779..1795863,1796569..1796655,1801884..1802060,1803513..1803596,1811790..1811927,1816327..1816454,1817447..1817618,1818667..1818787,1819391..1819818)
location: region:1364129-1819818:1
so has part: feature:1364129-1364473:1:exon
so has part: feature:1383817-1383900:1:exon
so has part: feature:1396066-1396106:1:exon
so has part: feature:1397229-1397284:1:exon
so has part: feature:1397742-1397838:1:exon
so has part: feature:1399568-1399716:1:exon
so has part: feature:1405553-1405688:1:exon
so has part: feature:1407692-1407846:1:exon
so has part: feature:1414791-1414872:1:exon
so has part: feature:1424776-1424911:1:exon
so has part: feature:1427258-1427333:1:exon
so has part: feature:1428289-1428365:1:exon
so has part: feature:1428943-1429068:1:exon
so has part: feature:1430277-1430401:1:exon
so has part: feature:1438865-1438963:1:exon
so has part: feature:1440640-1440712:1:exon
so has part: feature:1440833-1440936:1:exon
so has part: feature:1442890-1443073:1:exon
so has part: feature:1443245-1443342:1:exon
so has part: feature:1447345-1447434:1:exon
so has part: feature:1448562-1448662:1:exon
so has part: feature:1449458-1449592:1:exon
so has part: feature:1478685-1478793:1:exon
so has part: feature:1490543-1490613:1:exon
so has part: feature:1492694-1492800:1:exon
so has part: feature:1536437-1536585:1:exon
so has part: feature:1567921-1568016:1:exon
so has part: feature:1711971-1712069:1:exon
so has part: feature:1714923-1715017:1:exon
so has part: feature:1730877-1730955:1:exon
so has part: feature:1743485-1743585:1:exon
so has part: feature:1743681-1743739:1:exon
so has part: feature:1755098-1755246:1:exon
so has part: feature:1765225-1765310:1:exon
so has part: feature:1772586-1772742:1:exon
so has part: feature:1775126-1775166:1:exon
so has part: feature:1779214-1779304:1:exon
so has part: feature:1779946-1780065:1:exon
so has part: feature:1784655-1784744:1:exon
so has part: feature:1786500-1786604:1:exon
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urn:…
SIO_000300: 1
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urn:…
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SIO_000628: feature:1396066-1396106:1:exon

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urn:…
SIO_000300: 4
SIO_000628: feature:1397229-1397284:1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:1397742-1397838:1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:1399568-1399716:1:exon

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urn:…
SIO_000300: 7
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urn:…
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SIO_000628: feature:1414791-1414872:1:exon

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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:1427258-1427333:1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:1428289-1428365:1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:1428943-1429068:1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:1430277-1430401:1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:1438865-1438963:1:exon

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SIO_000300: 16
SIO_000628: feature:1440640-1440712:1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:1440833-1440936:1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:1442890-1443073:1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:1443245-1443342:1:exon

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urn:…
SIO_000300: 20
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SIO_000300: 21
SIO_000628: feature:1448562-1448662:1:exon

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SIO_000300: 22
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SIO_000300: 23
SIO_000628: feature:1478685-1478793:1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:1490543-1490613:1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:1492694-1492800:1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:1536437-1536585:1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:1567921-1568016:1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:1711971-1712069:1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:1714923-1715017:1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:1730877-1730955:1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:1743485-1743585:1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:1743681-1743739:1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:1755098-1755246:1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:1765225-1765310:1:exon

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SIO_000300: 35
SIO_000628: feature:1772586-1772742:1:exon

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SIO_000300: 36
SIO_000628: feature:1775126-1775166:1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:1779214-1779304:1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:1779946-1780065:1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:1784655-1784744:1:exon

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SIO_000300: 40
SIO_000628: feature:1786500-1786604:1:exon

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SIO_000300: 41
SIO_000628: feature:1788359-1788500:1:exon

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SIO_000300: 42
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urn:…
SIO_000300: 43
SIO_000628: feature:1795779-1795863:1:exon

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urn:…
SIO_000300: 44
SIO_000628: feature:1796569-1796655:1:exon

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urn:…
SIO_000300: 45
SIO_000628: feature:1801884-1802060:1:exon

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urn:…
SIO_000300: 46
SIO_000628: feature:1803513-1803596:1:exon

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urn:…
SIO_000300: 47
SIO_000628: feature:1811790-1811927:1:exon

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urn:…
SIO_000300: 48
SIO_000628: feature:1816327-1816454:1:exon

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reference: sequence
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urn:…
SIO_000300: 49
SIO_000628: feature:1817447-1817618:1:exon

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urn:…
SIO_000300: 50
SIO_000628: feature:1818667-1818787:1:exon

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reference: sequence
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urn:…
SIO_000300: 51
SIO_000628: feature:1819391-1819818:1:exon

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DOCK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: DOCK2
product: dedicator of cytokinesis 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_025270819.3
SIO_010081: DOCK2
subclass of: SO_0000673
so part of: DOCK2
location: join(1364130..1364473,1383817..1383900,1396066..1396106,1397229..1397284,1397742..1397838,1399568..1399716,1405553..1405688,1407692..1407846,1414791..1414872,1424776..1424911,1427258..1427333,1428289..1428365,1428943..1429068,1430277..1430401,1438865..1438963,1440640..1440712,1440833..1440936,1442890..1443073,1443245..1443342,1447345..1447434,1448562..1448662,1449458..1449592,1478685..1478793,1490543..1490613,1492694..1492800,1536437..1536585,1567921..1568016,1711971..1712069,1714923..1715017,1730877..1730955,1743485..1743585,1743681..1743739,1755098..1755246,1765225..1765310,1772586..1772742,1775126..1775166,1779214..1779304,1779946..1780065,1784655..1784744,1786500..1786604,1788359..1788500,1794347..1794428,1795779..1795863,1796569..1796655,1801884..1802060,1803513..1803596,1811790..1811927,1816327..1816454,1817447..1817618,1818667..1818787,1819826..1820274)
location: region:1364130-1820274:1
so has part: feature:1364130-1364473:1:exon
so has part: feature:1383817-1383900:1:exon
so has part: feature:1396066-1396106:1:exon
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so has part: feature:1397742-1397838:1:exon
so has part: feature:1399568-1399716:1:exon
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so has part: feature:1427258-1427333:1:exon
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so has part: feature:1447345-1447434:1:exon
so has part: feature:1448562-1448662:1:exon
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so has part: feature:1818667-1818787:1:exon
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position:1364130:1
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reference: sequence
type: ForwardStrandPosition
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position:1820274:1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:1364130-1364473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383817-1383900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1396066-1396106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397229-1397284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397742-1397838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399568-1399716:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1405553-1405688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407692-1407846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414791-1414872:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424776-1424911:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427258-1427333:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1428289-1428365:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1428943-1429068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1430277-1430401:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1438865-1438963:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440640-1440712:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1440833-1440936:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1442890-1443073:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1443245-1443342:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1447345-1447434:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1448562-1448662:1:exon

urn:…
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position:1819826:1
position: 1819826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DOCK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: DOCK2
product: dedicator of cytokinesis 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006075524.4
SIO_010081: DOCK2
subclass of: SO_0000673
so part of: DOCK2
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position:1364132:1
position: 1364132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 51
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position:1820288:1
position: 1820288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820430:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1821392-1821961:1:exon

position:1821392:1
position: 1821392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DOCK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: DOCK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 2 isoform X1
translation: MAPWRKTDKERHGVAIYNFQGSGTSQLSLQIGDVVRIQETCGDWYRGYLVKHKMLQGIFPKSFIYIKEVTVEKKRNIENIIPAEIPLAQEVTTTLWEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGNKILELDLIVRDEDGNILDPDNTSVISLFHAHEEATDKITERIKEEMSKDQPDYGMYSRISSSPTHSLYVFVRNFVCRIGEDAELFMSLYDPNKQMVISENYLVRWGSRGFPKEIEMLNNLKVVFTDLGNKDLNRDKIYLICQIVRVGKMDLKDTNTKKCTQGLRRPFGVAVMDITDIIKGKAESDEEKQHFIPFHPVTAENDFLHSLLGKVTASKGDSGGQGLWVTMKMLVGDIIQIRKDYPHLVDRTTVVARKLGFPEIIMPGDVRNDIYITILQGDFDKYNKTTQRNVEVIMCVCAEDGKTLPNAICVGAGDKPMNEYRSVVYYQVKQPRWMETVKVAVPIEDMQRIHLRFMFRHRSSLESKDKGEKNFAMSYVKLMKEDGTTLHDGCHDLVVLKGDSKKMEDASSYLTLPSYRHHVENKGATLSRSSSSVGGLSVSSRDVFCISTLVCSTKLTQNVGLLGLLKWRMKPQLLQENLEKLKIVDGEEVVKFLQDTLDALFNIMMEHSQSNEYDILVFDALIYIIGLIADRKFQHFNTVLEAYIQQHFSATLAYKKLMTVLKTYLDTSSRGEQCEPILRTLKALEYVFKFIVRSRTLFSQLYEGKEQMEFEESMRRLFESINNLMKSQYKTTILLQVAALKYIPSVLHDVETVFDAKLLSQLLYEFYTCIPPVKLQKQKVQSMNEIVQSNLFKKQECRDILLPVITKELKELLEQKDDMQHQVQEKKYCVELLNSILEVLSCQDAAFTYHHIQEIMVQLLRTVNRTVITMGRDHILISHFVACMTAILNQMGDQHYSFYIETFQTSSELVDFLMETFIMFKDLIGKNVYPADWVAMSMVQNRVFLRAINKFAETMNQKFLENTNFEFQLWNNYFHLAVAFITQDSLQLEQFSHAKYNKILNKYGDMRRLIGFSIRDMWYKLGQNKICFIPGMVGPILEMTLIPEAELRKATIPIFFDMMLCEYQRSGDFKKFENEIILKLDHEVEGGRGDEQYMQLLESILMECAAEHPTIYKSVENFVNLVKGLLEKLLDYRGVMTDESKDNRMSCTVNLLNFYKDNNREEMYIRYLYKLRDLHLDCDNFTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYDIIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYENIMKILRPKPDYFAVGYYGQGFPSFLRNKVFIYRGKEYERREDFQMQLMSQFPNAEKMNTTSAPGDDVKNAPGQYIQCFTVQPVLDEHPRFKNKPVPDQIINFYKSNYVQKFHYSRPVRRGTVDPENEFASMWIERTSFVTAYKLPGILRWFEVVHMSQTTISPLENAIETMSTANEKILMMINQYQSDETLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYAREHPEDQDKLTRLKDLIAWQIPFLGAGIKIHERRVSENLRPFHDRMEECFKNLKVKVEKEYGVREMPDFEDRRVGRPRSMLRSYRQMSIISMASLNSDCSTPSKATSESFDLEMAPPKTPKVEQEEPISPGSTLPEVKLRRSKKRAKRSSVVFADEKPSAESDLKRLSRKHEFMSDTNLSEHVAVAPRASILSQMSFASQSMPTIPALTLSVVGMPGMDEANASPRLSQTFLPLSDGDKKTLKRKKVNQFFKTMLAGKPTEEGKPTSDSTSTDL
SIO_010081: DOCK2
subclass of: SO_0000673
so part of: DOCK2
location: join(1364431..1364473,1383817..1383900,1396066..1396106,1397229..1397284,1397742..1397838,1399568..1399716,1405553..1405688,1407692..1407846,1414791..1414872,1424776..1424911,1427258..1427333,1428289..1428365,1428943..1429068,1430277..1430401,1438865..1438963,1440640..1440712,1440833..1440936,1442890..1443073,1443245..1443342,1447345..1447434,1448562..1448662,1449458..1449592,1478685..1478793,1490543..1490613,1492694..1492800,1536437..1536585,1567921..1568016,1711971..1712069,1714923..1715017,1730877..1730955,1743485..1743585,1743681..1743739,1755098..1755246,1765225..1765310,1772586..1772742,1775126..1775166,1779214..1779304,1779946..1780065,1784655..1784744,1786500..1786604,1788359..1788500,1794347..1794428,1795779..1795863,1796569..1796655,1801884..1802060,1803513..1803596,1811790..1811927,1816327..1816454,1817447..1817618,1818667..1818787,1820288..1820430,1821392..1821454)
location: region:1364431-1821454:1
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XP_006075586.3
type: Protein
SIO_000068: ncbiprotein

position:1364431:1
position: 1364431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821454:1
position: 1821454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 21
SIO_000628: feature:1448562-1448662:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1449458-1449592:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1478685-1478793:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1490543-1490613:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1492694-1492800:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1536437-1536585:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1567921-1568016:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1711971-1712069:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1714923-1715017:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1730877-1730955:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1743485-1743585:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1743681-1743739:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1755098-1755246:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1765225-1765310:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1772586-1772742:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1775126-1775166:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1779214-1779304:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1779946-1780065:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1784655-1784744:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1786500-1786604:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1788359-1788500:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1794347-1794428:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1795779-1795863:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1796569-1796655:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1801884-1802060:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1803513-1803596:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1811790-1811927:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1816327-1816454:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1817447-1817618:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1818667-1818787:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1820288-1820430:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1821392-1821454:1:exon

DOCK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: DOCK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 2 isoform X3
translation: MAPWRKTDKERHGVAIYNFQGSGTSQLSLQIGDVVRIQETCGDWYRGYLVKHKMLQGIFPKSFIYIKEVTVEKKRNIENIIPAEIPLAQEVTTTLWEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGNKILELDLIVRDEDGNILDPDNTSVISLFHAHEEATDKITERIKEEMSKDQPDYGMYSRISSSPTHSLYVFVRNFVCRIGEDAELFMSLYDPNKQMVISENYLVRWGSRGFPKEIEMLNNLKVVFTDLGNKDLNRDKIYLICQIVRVGKMDLKDTNTKKCTQGLRRPFGVAVMDITDIIKGKAESDEEKQHFIPFHPVTAENDFLHSLLGKVTASKGDSGGQGLWVTMKMLVGDIIQIRKDYPHLVDRTTVVARKLGFPEIIMPGDVRNDIYITILQGDFDKYNKTTQRNVEVIMCVCAEDGKTLPNAICVGAGDKPMNEYRSVVYYQVKQPRWMETVKVAVPIEDMQRIHLRFMFRHRSSLESKDKGEKNFAMSYVKLMKEDGTTLHDGCHDLVVLKGDSKKMEDASSYLTLPSYRHHVENKGATLSRSSSSVGGLSVSSRDVFCISTLVCSTKLTQNVGLLGLLKWRMKPQLLQENLEKLKIVDGEEVVKFLQDTLDALFNIMMEHSQSNEYDILVFDALIYIIGLIADRKFQHFNTVLEAYIQQHFSATLAYKKLMTVLKTYLDTSSRGEQCEPILRTLKALEYVFKFIVRSRTLFSQLYEGKEQMEFEESMRRLFESINNLMKSQYKTTILLQVAALKYIPSVLHDVETVFDAKLLSQLLYEFYTCIPPVKLQKQKVQSMNEIVQSNLFKKQECRDILLPVITKELKELLEQKDDMQHQVQEKKYCVELLNSILEVLSCQDAAFTYHHIQEIMVQLLRTVNRTVITMGRDHILISHFVACMTAILNQMGDQHYSFYIETFQTSSELVDFLMETFIMFKDLIGKNVYPADWVAMSMVQNRVFLRAINKFAETMNQKFLENTNFEFQLWNNYFHLAVAFITQDSLQLEQFSHAKYNKILNKYGDMRRLIGFSIRDMWYKLGQNKICFIPGMVGPILEMTLIPEAELRKATIPIFFDMMLCEYQRSGDFKKFENEIILKLDHEVEGGRGDEQYMQLLESILMECAAEHPTIYKSVENFVNLVKGLLEKLLDYRGVMTDESKDNRMSCTVNLLNFYKDNNREEMYIRYLYKLRDLHLDCDNFTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYDIIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYENIMKILRPKPDYFAVGYYGQGFPSFLRNKVFIYRGKEYERREDFQMQLMSQFPNAEKMNTTSAPGDDVKNAPGQYIQCFTVQPVLDEHPRFKNKPVPDQIINFYKSNYVQKFHYSRPVRRGTVDPENEFASMWIERTSFVTAYKLPGILRWFEVVHMSQTTISPLENAIETMSTANEKILMMINQYQSDETLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYAREHPEDQDKLTRLKDLIAWQIPFLGAGIKIHERRVSENLRPFHDRMEECFKNLKVKVEKEYGVREMPDFEDRRVGRPRSMLRSYRQMSIISMASLNSDCSTPSKATSESFDLEMAPPKTPKVEQEEPISPGSTLPEVKLRRSKKRAKRSSVVFADEKPSAESDLKRLSRKHEFMSDTNLSEHVAVAPRASILSQMSFASQSMPTIPGQSPGSEQPL
SIO_010081: DOCK2
subclass of: SO_0000673
so part of: DOCK2
location: join(1364431..1364473,1383817..1383900,1396066..1396106,1397229..1397284,1397742..1397838,1399568..1399716,1405553..1405688,1407692..1407846,1414791..1414872,1424776..1424911,1427258..1427333,1428289..1428365,1428943..1429068,1430277..1430401,1438865..1438963,1440640..1440712,1440833..1440936,1442890..1443073,1443245..1443342,1447345..1447434,1448562..1448662,1449458..1449592,1478685..1478793,1490543..1490613,1492694..1492800,1536437..1536585,1567921..1568016,1711971..1712069,1714923..1715017,1730877..1730955,1743485..1743585,1743681..1743739,1755098..1755246,1765225..1765310,1772586..1772742,1775126..1775166,1779214..1779304,1779946..1780065,1784655..1784744,1786500..1786604,1788359..1788500,1794347..1794428,1795779..1795863,1796569..1796655,1801884..1802060,1803513..1803596,1811790..1811927,1816327..1816454,1817447..1817618,1818667..1818787,1819826..1819857)
location: region:1364431-1819857:1
so has part: feature:1364431-1364473:1:exon
so has part: feature:1383817-1383900:1:exon
so has part: feature:1396066-1396106:1:exon
so has part: feature:1397229-1397284:1:exon
so has part: feature:1397742-1397838:1:exon
so has part: feature:1399568-1399716:1:exon
so has part: feature:1405553-1405688:1:exon
so has part: feature:1407692-1407846:1:exon
so has part: feature:1414791-1414872:1:exon
so has part: feature:1424776-1424911:1:exon
so has part: feature:1427258-1427333:1:exon
so has part: feature:1428289-1428365:1:exon
so has part: feature:1428943-1429068:1:exon
so has part: feature:1430277-1430401:1:exon
so has part: feature:1438865-1438963:1:exon
so has part: feature:1440640-1440712:1:exon
so has part: feature:1440833-1440936:1:exon
so has part: feature:1442890-1443073:1:exon
so has part: feature:1443245-1443342:1:exon
so has part: feature:1447345-1447434:1:exon
so has part: feature:1448562-1448662:1:exon
so has part: feature:1449458-1449592:1:exon
so has part: feature:1478685-1478793:1:exon
so has part: feature:1490543-1490613:1:exon
so has part: feature:1492694-1492800:1:exon
so has part: feature:1536437-1536585:1:exon
so has part: feature:1567921-1568016:1:exon
so has part: feature:1711971-1712069:1:exon
so has part: feature:1714923-1715017:1:exon
so has part: feature:1730877-1730955:1:exon
so has part: feature:1743485-1743585:1:exon
so has part: feature:1743681-1743739:1:exon
so has part: feature:1755098-1755246:1:exon
so has part: feature:1765225-1765310:1:exon
so has part: feature:1772586-1772742:1:exon
so has part: feature:1775126-1775166:1:exon
so has part: feature:1779214-1779304:1:exon
so has part: feature:1779946-1780065:1:exon
so has part: feature:1784655-1784744:1:exon
so has part: feature:1786500-1786604:1:exon
so has part: feature:1788359-1788500:1:exon
so has part: feature:1794347-1794428:1:exon
so has part: feature:1795779-1795863:1:exon
so has part: feature:1796569-1796655:1:exon
so has part: feature:1801884-1802060:1:exon
so has part: feature:1803513-1803596:1:exon
so has part: feature:1811790-1811927:1:exon
so has part: feature:1816327-1816454:1:exon
so has part: feature:1817447-1817618:1:exon
so has part: feature:1818667-1818787:1:exon
so has part: feature:1819826-1819857:1:exon

XP_025126604.2
type: Protein
SIO_000068: ncbiprotein

position:1819857:1
position: 1819857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364431-1364473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383817-1383900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1396066-1396106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397229-1397284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397742-1397838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399568-1399716:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1405553-1405688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407692-1407846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414791-1414872:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424776-1424911:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427258-1427333:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1428289-1428365:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1428943-1429068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1430277-1430401:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1438865-1438963:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440640-1440712:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1440833-1440936:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1442890-1443073:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1443245-1443342:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1447345-1447434:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1448562-1448662:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1449458-1449592:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1478685-1478793:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1490543-1490613:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1492694-1492800:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1536437-1536585:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1567921-1568016:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1711971-1712069:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1714923-1715017:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1730877-1730955:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1743485-1743585:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1743681-1743739:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1755098-1755246:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1765225-1765310:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1772586-1772742:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1775126-1775166:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1779214-1779304:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1779946-1780065:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1784655-1784744:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1786500-1786604:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1788359-1788500:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1794347-1794428:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1795779-1795863:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1796569-1796655:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1801884-1802060:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1803513-1803596:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1811790-1811927:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1816327-1816454:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1817447-1817618:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1818667-1818787:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1819826-1819857:1:exon

DOCK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: DOCK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 2 isoform X2
translation: MAPWRKTDKERHGVAIYNFQGSGTSQLSLQIGDVVRIQETCGDWYRGYLVKHKMLQGIFPKSFIYIKEVTVEKKRNIENIIPAEIPLAQEVTTTLWEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGNKILELDLIVRDEDGNILDPDNTSVISLFHAHEEATDKITERIKEEMSKDQPDYGMYSRISSSPTHSLYVFVRNFVCRIGEDAELFMSLYDPNKQMVISENYLVRWGSRGFPKEIEMLNNLKVVFTDLGNKDLNRDKIYLICQIVRVGKMDLKDTNTKKCTQGLRRPFGVAVMDITDIIKGKAESDEEKQHFIPFHPVTAENDFLHSLLGKVTASKGDSGGQGLWVTMKMLVGDIIQIRKDYPHLVDRTTVVARKLGFPEIIMPGDVRNDIYITILQGDFDKYNKTTQRNVEVIMCVCAEDGKTLPNAICVGAGDKPMNEYRSVVYYQVKQPRWMETVKVAVPIEDMQRIHLRFMFRHRSSLESKDKGEKNFAMSYVKLMKEDGTTLHDGCHDLVVLKGDSKKMEDASSYLTLPSYRHHVENKGATLSRSSSSVGGLSVSSRDVFCISTLVCSTKLTQNVGLLGLLKWRMKPQLLQENLEKLKIVDGEEVVKFLQDTLDALFNIMMEHSQSNEYDILVFDALIYIIGLIADRKFQHFNTVLEAYIQQHFSATLAYKKLMTVLKTYLDTSSRGEQCEPILRTLKALEYVFKFIVRSRTLFSQLYEGKEQMEFEESMRRLFESINNLMKSQYKTTILLQVAALKYIPSVLHDVETVFDAKLLSQLLYEFYTCIPPVKLQKQKVQSMNEIVQSNLFKKQECRDILLPVITKELKELLEQKDDMQHQVQEKKYCVELLNSILEVLSCQDAAFTYHHIQEIMVQLLRTVNRTVITMGRDHILISHFVACMTAILNQMGDQHYSFYIETFQTSSELVDFLMETFIMFKDLIGKNVYPADWVAMSMVQNRVFLRAINKFAETMNQKFLENTNFEFQLWNNYFHLAVAFITQDSLQLEQFSHAKYNKILNKYGDMRRLIGFSIRDMWYKLGQNKICFIPGMVGPILEMTLIPEAELRKATIPIFFDMMLCEYQRSGDFKKFENEIILKLDHEVEGGRGDEQYMQLLESILMECAAEHPTIYKSVENFVNLVKGLLEKLLDYRGVMTDESKDNRMSCTVNLLNFYKDNNREEMYIRYLYKLRDLHLDCDNFTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYDIIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYENIMKILRPKPDYFAVGYYGQGFPSFLRNKVFIYRGKEYERREDFQMQLMSQFPNAEKMNTTSAPGDDVKNAPGQYIQCFTVQPVLDEHPRFKNKPVPDQIINFYKSNYVQKFHYSRPVRRGTVDPENEFASMWIERTSFVTAYKLPGILRWFEVVHMSQTTISPLENAIETMSTANEKILMMINQYQSDETLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYAREHPEDQDKLTRLKDLIAWQIPFLGAGIKIHERRVSENLRPFHDRMEECFKNLKVKVEKEYGVREMPDFEDRRVGRPRSMLRSYRQMSIISMASLNSDCSTPSKATSESFDLEMAPPKTPKVEQEEPISPGSTLPEVKLRRSKKRAKRSSVVFADEKPSAESDLKRLSRKHEFMSDTNLSEHVAVAPRASILSQMSFASQSMPTIPAKGPQAPSSLQPVTNRPQVGGQRQASEQSFICRLSSLALLPEQFPPNTPCKKCLP
SIO_010081: DOCK2
subclass of: SO_0000673
so part of: DOCK2
location: join(1364431..1364473,1383817..1383900,1396066..1396106,1397229..1397284,1397742..1397838,1399568..1399716,1405553..1405688,1407692..1407846,1414791..1414872,1424776..1424911,1427258..1427333,1428289..1428365,1428943..1429068,1430277..1430401,1438865..1438963,1440640..1440712,1440833..1440936,1442890..1443073,1443245..1443342,1447345..1447434,1448562..1448662,1449458..1449592,1478685..1478793,1490543..1490613,1492694..1492800,1536437..1536585,1567921..1568016,1711971..1712069,1714923..1715017,1730877..1730955,1743485..1743585,1743681..1743739,1755098..1755246,1765225..1765310,1772586..1772742,1775126..1775166,1779214..1779304,1779946..1780065,1784655..1784744,1786500..1786604,1788359..1788500,1794347..1794428,1795779..1795863,1796569..1796655,1801884..1802060,1803513..1803596,1811790..1811927,1816327..1816454,1817447..1817618,1818667..1818787,1819391..1819557)
location: region:1364431-1819557:1
so has part: feature:1364431-1364473:1:exon
so has part: feature:1383817-1383900:1:exon
so has part: feature:1396066-1396106:1:exon
so has part: feature:1397229-1397284:1:exon
so has part: feature:1397742-1397838:1:exon
so has part: feature:1399568-1399716:1:exon
so has part: feature:1405553-1405688:1:exon
so has part: feature:1407692-1407846:1:exon
so has part: feature:1414791-1414872:1:exon
so has part: feature:1424776-1424911:1:exon
so has part: feature:1427258-1427333:1:exon
so has part: feature:1428289-1428365:1:exon
so has part: feature:1428943-1429068:1:exon
so has part: feature:1430277-1430401:1:exon
so has part: feature:1438865-1438963:1:exon
so has part: feature:1440640-1440712:1:exon
so has part: feature:1440833-1440936:1:exon
so has part: feature:1442890-1443073:1:exon
so has part: feature:1443245-1443342:1:exon
so has part: feature:1447345-1447434:1:exon
so has part: feature:1448562-1448662:1:exon
so has part: feature:1449458-1449592:1:exon
so has part: feature:1478685-1478793:1:exon
so has part: feature:1490543-1490613:1:exon
so has part: feature:1492694-1492800:1:exon
so has part: feature:1536437-1536585:1:exon
so has part: feature:1567921-1568016:1:exon
so has part: feature:1711971-1712069:1:exon
so has part: feature:1714923-1715017:1:exon
so has part: feature:1730877-1730955:1:exon
so has part: feature:1743485-1743585:1:exon
so has part: feature:1743681-1743739:1:exon
so has part: feature:1755098-1755246:1:exon
so has part: feature:1765225-1765310:1:exon
so has part: feature:1772586-1772742:1:exon
so has part: feature:1775126-1775166:1:exon
so has part: feature:1779214-1779304:1:exon
so has part: feature:1779946-1780065:1:exon
so has part: feature:1784655-1784744:1:exon
so has part: feature:1786500-1786604:1:exon
so has part: feature:1788359-1788500:1:exon
so has part: feature:1794347-1794428:1:exon
so has part: feature:1795779-1795863:1:exon
so has part: feature:1796569-1796655:1:exon
so has part: feature:1801884-1802060:1:exon
so has part: feature:1803513-1803596:1:exon
so has part: feature:1811790-1811927:1:exon
so has part: feature:1816327-1816454:1:exon
so has part: feature:1817447-1817618:1:exon
so has part: feature:1818667-1818787:1:exon
so has part: feature:1819391-1819557:1:exon

XP_025126603.2
type: Protein
SIO_000068: ncbiprotein

position:1819557:1
position: 1819557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364431-1364473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383817-1383900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1396066-1396106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397229-1397284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397742-1397838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399568-1399716:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1405553-1405688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1407692-1407846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414791-1414872:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424776-1424911:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427258-1427333:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1428289-1428365:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1428943-1429068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1430277-1430401:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1438865-1438963:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440640-1440712:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1440833-1440936:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1442890-1443073:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1443245-1443342:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1447345-1447434:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1448562-1448662:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1449458-1449592:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1478685-1478793:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1490543-1490613:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1492694-1492800:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1536437-1536585:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1567921-1568016:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1711971-1712069:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1714923-1715017:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1730877-1730955:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1743485-1743585:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1743681-1743739:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1755098-1755246:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1765225-1765310:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1772586-1772742:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1775126-1775166:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1779214-1779304:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1779946-1780065:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1784655-1784744:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1786500-1786604:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1788359-1788500:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1794347-1794428:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1795779-1795863:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1796569-1796655:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1801884-1802060:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1803513-1803596:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1811790-1811927:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1816327-1816454:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1817447-1817618:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1818667-1818787:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1819391-1819557:1:exon

INSYN2B
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: INSYN2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1588471..1611221)
location: region:1588471-1611221:-1
so has part: feature:1588471-1611221:-1:exon
subclass of: SO_0000010

102389081
type: Gene
SIO_000068: ncbigene

position:1588471:-1
position: 1588471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611221:-1
position: 1611221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588471-1611221:-1:exon

INSYN2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: INSYN2B
product: inhibitory synaptic factor family member 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_025270821.2
SIO_010081: INSYN2B
subclass of: SO_0000673
so part of: INSYN2B
location: complement(join(1588471..1588657,1608678..1608752,1609882..1611221))
location: region:1588471-1611221:-1
so has part: feature:1609882-1611221:-1:exon
so has part: feature:1608678-1608752:-1:exon
so has part: feature:1588471-1588657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1609882-1611221:-1:exon

position:1609882:-1
position: 1609882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1608678-1608752:-1:exon

position:1608678:-1
position: 1608678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608752:-1
position: 1608752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1588471-1588657:-1:exon

position:1588657:-1
position: 1588657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INSYN2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: INSYN2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein INSYN2B
translation: MAQQSMKVRPVLLKRNSLESVELVKQPHHRRSKSQQVRFKEDGTSKTPPGLAEVDVQTSEDPAVMGKTQASRHHHLPTYSLSFPRSQKAGGFRNIAIQTSPSLRKHFPVFKRKRLTASKSLVEMPTASQSAIQVNGSLSEQDIVSSDLAYLRLAQHLEDGPRRVKVSHPFLPRMSKVQSNGPVSLCFEAGTWRALEKVTAAIQVPDDIYHSPTWAGRESTLSPDRSAEMSNSIPPSVDRHPGDGRRELPPDSERIPSCLNAPSRASHMPGTGNLQPELLLPKDNSNDKDLGPLSSRSKERCAPSYPRTHSSPPPGSQSQPAQTGGASDCSSLSNNYQDLQSLQTNSESGSAPVCQEQTAKNPIKSDIPELQNCPGSGHLPSSLPNRETKQQRVTGGINPIHLVQGELCDLQGRLQSVEESLHSNQEKIKVLLNVIQDLEKARALTEGRNFYRTGQDLNNCSTCQNTACIIYSVEYDFRQQEGRFHEVLQSLEEVELAEEASPPPKSPPKSPVPEKQDLRRKTKKVKKKCFWWI
SIO_010081: INSYN2B
subclass of: SO_0000673
so part of: INSYN2B
location: complement(join(1588471..1588657,1608678..1608752,1609882..1611221))
location: region:1588471-1611221:-1
so has part: feature:1609882-1611221:-1:exon
so has part: feature:1608678-1608752:-1:exon
so has part: feature:1588471-1588657:-1:exon

XP_025126606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1609882-1611221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1608678-1608752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588471-1588657:-1:exon

FOXI1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: FOXI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1829661..1835734
location: region:1829661-1835734:1
so has part: feature:1829661-1835734:1:exon
subclass of: SO_0000010

102390173
type: Gene
SIO_000068: ncbigene

position:1829661:1
position: 1829661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1835734:1
position: 1835734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1829661-1835734:1:exon

FOXI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: FOXI1
product: forkhead box I1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_006075525.3
SIO_010081: FOXI1
subclass of: SO_0000673
so part of: FOXI1
location: join(1829661..1832471,1834107..1835734)
location: region:1829661-1835734:1
so has part: feature:1829661-1832471:1:exon
so has part: feature:1834107-1835734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1829661-1832471:1:exon

position:1832471:1
position: 1832471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1834107-1835734:1:exon

position:1834107:1
position: 1834107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: FOXI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein I1
translation: MSSFDLPAPSPPRCSPQFPSLGQEPPEMNLYYENFFHPQGAPSPQRPPSFEGGGEYGAAPNPYLWLNGPAVTPPPYLPGGSPFLPQAYGGMQRQLLPAGMPTLGAGDLGWLPLPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDVSSSAGSMVSEKTEAGLLAGSPETAEAQDILDGAAPGPTGSPEKRPTPPPPGTPCLSSFLSTMSAYVSGPSPVSRPTATTPGLSLEPADKGGQNSLSFSSYTPLTNISGPAGGGEWASPMPSNALGYGGSVLNQFSPPFYGSISTNSVLYPREGTEV
SIO_010081: FOXI1
subclass of: SO_0000673
so part of: FOXI1
location: join(1831895..1832471,1834107..1834669)
location: region:1831895-1834669:1
so has part: feature:1831895-1832471:1:exon
so has part: feature:1834107-1834669:1:exon

XP_006075587.1
type: Protein
SIO_000068: ncbiprotein

position:1831895:1
position: 1831895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834669:1
position: 1834669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1831895-1832471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1834107-1834669:1:exon

LOC112580734
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112580734
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1851917..1852021)
location: region:1851917-1852021:-1
so has part: feature:1851917-1852021:-1:exon
subclass of: SO_0000623

112580734
type: Gene
SIO_000068: ncbigene

position:1851917:-1
position: 1851917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852021:-1
position: 1852021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1851917-1852021:-1:exon

LOC112580734
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: snRNA
gene: LOC112580734
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003105072.1
SIO_010081: LOC112580734
subclass of: SO_0000673
so part of: LOC112580734
location: complement(1851917..1852021)
location: region:1851917-1852021:-1
so has part: feature:1851917-1852021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1851917-1852021:-1:exon

C19H5orf58
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: C19H5orf58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1940155..1953698
location: region:1940155-1953698:1
so has part: feature:1940155-1953698:1:exon
subclass of: SO_0000010

112580675
type: Gene
SIO_000068: ncbigene

position:1940155:1
position: 1940155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1953698:1
position: 1953698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940155-1953698:1:exon

C19H5orf58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf58
product: chromosome 19 C5orf58 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270830.3
SIO_010081: C19H5orf58
subclass of: SO_0000673
so part of: C19H5orf58
location: join(1940155..1940240,1941273..1941346,1942611..1942704,1953430..1953698)
location: region:1940155-1953698:1
so has part: feature:1940155-1940240:1:exon
so has part: feature:1941273-1941346:1:exon
so has part: feature:1942611-1942704:1:exon
so has part: feature:1953430-1953698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1940155-1940240:1:exon

position:1940240:1
position: 1940240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1941273-1941346:1:exon

position:1941273:1
position: 1941273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1941346:1
position: 1941346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1942611-1942704:1:exon

position:1942611:1
position: 1942611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1942704:1
position: 1942704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1953430-1953698:1:exon

position:1953430:1
position: 1953430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C19H5orf58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf58
product: chromosome 19 C5orf58 homolog, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270833.3
SIO_010081: C19H5orf58
subclass of: SO_0000673
so part of: C19H5orf58
location: join(1940191..1940240,1942611..1942704,1953430..1953698)
location: region:1940191-1953698:1
so has part: feature:1940191-1940240:1:exon
so has part: feature:1942611-1942704:1:exon
so has part: feature:1953430-1953698:1:exon

position:1940191:1
position: 1940191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940191-1940240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1942611-1942704:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1953430-1953698:1:exon

C19H5orf58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf58
product: chromosome 19 C5orf58 homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045163661.1
SIO_010081: C19H5orf58
subclass of: SO_0000673
so part of: C19H5orf58
location: join(1940270..1940432,1941273..1941346,1942611..1942704,1953430..1953698)
location: region:1940270-1953698:1
so has part: feature:1940270-1940432:1:exon
so has part: feature:1941273-1941346:1:exon
so has part: feature:1942611-1942704:1:exon
so has part: feature:1953430-1953698:1:exon

position:1940270:1
position: 1940270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940270-1940432:1:exon

position:1940432:1
position: 1940432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1941273-1941346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1942611-1942704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1953430-1953698:1:exon

C19H5orf58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf58
product: chromosome 19 C5orf58 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932635.2
SIO_010081: C19H5orf58
subclass of: SO_0000673
so part of: C19H5orf58
location: join(1940308..1940383,1941273..1941346,1942611..1942704,1953430..1953698)
location: region:1940308-1953698:1
so has part: feature:1940308-1940383:1:exon
so has part: feature:1941273-1941346:1:exon
so has part: feature:1942611-1942704:1:exon
so has part: feature:1953430-1953698:1:exon

position:1940308:1
position: 1940308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940308-1940383:1:exon

position:1940383:1
position: 1940383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1941273-1941346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1942611-1942704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1953430-1953698:1:exon

C19H5orf58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C5orf58 homolog
translation: MIKNNVTDHKLNVEAIIKNINTISLELKKMNELSQLLLCDLTLHFSHPVKTDDLKETERNSPHFEESKMPDVSLASDSF
SIO_010081: C19H5orf58
subclass of: SO_0000673
so part of: C19H5orf58
location: join(1942611..1942704,1953430..1953575)
location: region:1942611-1953575:1
so has part: feature:1942611-1942704:1:exon
so has part: feature:1953430-1953575:1:exon

XP_025126615.2
type: Protein
SIO_000068: ncbiprotein

position:1953575:1
position: 1953575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1942611-1942704:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1953430-1953575:1:exon

C19H5orf58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C5orf58 homolog
translation: MIKNNVTDHKLNVEAIIKNINTISLELKKMNELSQLLLCDLTLHFSHPVKTDDLKETERNSPHFEESKMPDVSLASDSF
SIO_010081: C19H5orf58
subclass of: SO_0000673
so part of: C19H5orf58
location: join(1942611..1942704,1953430..1953575)
location: region:1942611-1953575:1
so has part: feature:1942611-1942704:1:exon
so has part: feature:1953430-1953575:1:exon

XP_044788570.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1942611-1942704:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1953430-1953575:1:exon

C19H5orf58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C5orf58 homolog
translation: MIKNNVTDHKLNVEAIIKNINTISLELKKMNELSQLLLCDLTLHFSHPVKTDDLKETERNSPHFEESKMPDVSLASDSF
SIO_010081: C19H5orf58
subclass of: SO_0000673
so part of: C19H5orf58
location: join(1942611..1942704,1953430..1953575)
location: region:1942611-1953575:1
so has part: feature:1942611-1942704:1:exon
so has part: feature:1953430-1953575:1:exon

XP_045019596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1942611-1942704:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1953430-1953575:1:exon

C19H5orf58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C5orf58 homolog
translation: MIKNNVTDHKLNVEAIIKNINTISLELKKMNELSQLLLCDLTLHFSHPVKTDDLKETERNSPHFEESKMPDVSLASDSF
SIO_010081: C19H5orf58
subclass of: SO_0000673
so part of: C19H5orf58
location: join(1942611..1942704,1953430..1953575)
location: region:1942611-1953575:1
so has part: feature:1942611-1942704:1:exon
so has part: feature:1953430-1953575:1:exon

XP_025126618.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1942611-1942704:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1953430-1953575:1:exon

LCP2
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1955679..2004141)
location: region:1955679-2004141:-1
so has part: feature:1955679-2004141:-1:exon
subclass of: SO_0000010

102390741
type: Gene
SIO_000068: ncbigene

position:1955679:-1
position: 1955679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004141:-1
position: 2004141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1955679-2004141:-1:exon

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006075527.4
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1955679..1956432,1958450..1958605,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975604,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2004133))
location: region:1955679-2004133:-1
so has part: feature:2003833-2004133:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975604:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1958450-1958605:-1:exon
so has part: feature:1955679-1956432:-1:exon

position:2004133:-1
position: 2004133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2004133:-1:exon

position:2003833:-1
position: 2003833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

position:1998631:-1
position: 1998631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998693:-1
position: 1998693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

position:1993581:-1
position: 1993581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993627:-1
position: 1993627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

position:1984630:-1
position: 1984630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984695:-1
position: 1984695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

position:1984239:-1
position: 1984239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984270:-1
position: 1984270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

position:1983619:-1
position: 1983619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1983656:-1
position: 1983656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

position:1980019:-1
position: 1980019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980217:-1
position: 1980217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

position:1977943:-1
position: 1977943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978040:-1
position: 1978040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975604:-1:exon

position:1975538:-1
position: 1975538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975604:-1
position: 1975604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

position:1975361:-1
position: 1975361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975444:-1
position: 1975444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

position:1971469:-1
position: 1971469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971494:-1
position: 1971494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

position:1971343:-1
position: 1971343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971362:-1
position: 1971362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

position:1971143:-1
position: 1971143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971250:-1
position: 1971250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

position:1969750:-1
position: 1969750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969780:-1
position: 1969780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

position:1967397:-1
position: 1967397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967409:-1
position: 1967409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

position:1966600:-1
position: 1966600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966729:-1
position: 1966729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

position:1965080:-1
position: 1965080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1965129:-1
position: 1965129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

position:1961537:-1
position: 1961537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961628:-1
position: 1961628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

position:1960860:-1
position: 1960860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960937:-1
position: 1960937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1958450-1958605:-1:exon

position:1958450:-1
position: 1958450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958605:-1
position: 1958605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1955679-1956432:-1:exon

position:1956432:-1
position: 1956432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270825.3
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1955679..1956432,1958450..1958605,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2004131))
location: region:1955679-2004131:-1
so has part: feature:2003833-2004131:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1958450-1958605:-1:exon
so has part: feature:1955679-1956432:-1:exon

position:2004131:-1
position: 2004131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2004131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975607:-1:exon

position:1975607:-1
position: 1975607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1958450-1958605:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1955679-1956432:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X5
translation: MAFKNVPFRSEVLNWDPNTLADYFKKLNYKDCEKVVRKYDIDGPRFLNLAENDIQKFPKLRVPILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPNDDADAEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPSLPPLPAAGRIHQPLPPPQPNHEEPSRSRNHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPVISDKPSVLGGRPPGEHFPKIQKPPLPPATERHDRGSPLPGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMTSNTFPSRSTKPSPKNSLPLTHSSGAFSESNTNFPQSASLPPYFSQGPGNRPLPRMEGRNFSPVPSKPRPQSPGEEENSLNEDWYVSYITRTEAEAALRKINQDGTFLVRDSSKKTISNPYVLMVLYKDKVYNIQIRYQEESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTYSAGYP
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1956310..1956432,1958450..1958605,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975604,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2003910))
location: region:1956310-2003910:-1
so has part: feature:2003833-2003910:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975604:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1958450-1958605:-1:exon
so has part: feature:1956310-1956432:-1:exon

XP_006075589.1
type: Protein
SIO_000068: ncbiprotein

position:1956310:-1
position: 1956310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003910:-1
position: 2003910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2003910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1958450-1958605:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1956310-1956432:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X4
translation: MAFKNVPFRSEVLNWDPNTLADYFKKLNYKDCEKVVRKYDIDGPRFLNLAENDIQKFPKLRVPILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPNDDADAEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPSLPPLPAAGRIHQQPLPPPQPNHEEPSRSRNHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPVISDKPSVLGGRPPGEHFPKIQKPPLPPATERHDRGSPLPGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMTSNTFPSRSTKPSPKNSLPLTHSSGAFSESNTNFPQSASLPPYFSQGPGNRPLPRMEGRNFSPVPSKPRPQSPGEEENSLNEDWYVSYITRTEAEAALRKINQDGTFLVRDSSKKTISNPYVLMVLYKDKVYNIQIRYQEESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTYSAGYP
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1956310..1956432,1958450..1958605,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2003910))
location: region:1956310-2003910:-1
so has part: feature:2003833-2003910:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1958450-1958605:-1:exon
so has part: feature:1956310-1956432:-1:exon

XP_025126610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2003910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1958450-1958605:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1956310-1956432:-1:exon

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_025270824.3
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959809..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1985111..1985267,1993581..1993627,1998631..1998699))
location: region:1959809-1998699:-1
so has part: feature:1998631-1998699:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1985111-1985267:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959809-1960268:-1:exon

position:1959809:-1
position: 1959809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998699:-1
position: 1998699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1998631-1998699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1985111-1985267:-1:exon

position:1985111:-1
position: 1985111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985267:-1
position: 1985267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1959809-1960268:-1:exon

position:1960268:-1
position: 1960268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_044932634.2
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959810..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1998631..1998678))
location: region:1959810-1998678:-1
so has part: feature:1998631-1998678:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959810-1960268:-1:exon

position:1959810:-1
position: 1959810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998678:-1
position: 1998678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1998631-1998678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1959810-1960268:-1:exon

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_025270828.3
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959810..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1992720..1992824))
location: region:1959810-1992824:-1
so has part: feature:1992720-1992824:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959810-1960268:-1:exon

position:1992824:-1
position: 1992824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1992720-1992824:-1:exon

position:1992720:-1
position: 1992720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1959810-1960268:-1:exon

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_025270823.3
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959811..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975604,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2004141))
location: region:1959811-2004141:-1
so has part: feature:2003833-2004141:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975604:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959811-1960268:-1:exon

position:1959811:-1
position: 1959811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2004141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1959811-1960268:-1:exon

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_025270822.3
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959811..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2004140))
location: region:1959811-2004140:-1
so has part: feature:2003833-2004140:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959811-1960268:-1:exon

position:2004140:-1
position: 2004140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2004140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1959811-1960268:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X2
translation: MAFKNVPFRSEVLNWDPNTLADYFKKLNYKDCEKVVRKYDIDGPRFLNLAENDIQKFPKLRVPILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPNDDADAEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPSLPPLPAAGRIHQPLPPPQPNHEEPSRSRNHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPVISDKPSVLGGRPPGEHFPKIQKPPLPPATERHDRGSPLPGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMTSNTFPSRSTKPSPKNSLPLTHSSGAFSESNTNFPQSASLPPYFSQGPGNRPLPRMEGRNFSPVPSKPRPQSPGEEENSLNEDWYVSYITRTEAEAALRKINQESHSIKRKLFPPNFQHLTSCIFLLTPNCHPQQCGRTHIETDSSNLLSFSLEISNCHLILKVLNLISCLPVLNTNLKPIYQRYFTFRILHILRLQQKSWSLKLGGTFIFFLIIGSD
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959921..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975604,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2003910))
location: region:1959921-2003910:-1
so has part: feature:2003833-2003910:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975604:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959921-1960268:-1:exon

XP_025126608.3
type: Protein
SIO_000068: ncbiprotein

position:1959921:-1
position: 1959921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2003910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1959921-1960268:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X1
translation: MAFKNVPFRSEVLNWDPNTLADYFKKLNYKDCEKVVRKYDIDGPRFLNLAENDIQKFPKLRVPILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPNDDADAEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPSLPPLPAAGRIHQQPLPPPQPNHEEPSRSRNHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPVISDKPSVLGGRPPGEHFPKIQKPPLPPATERHDRGSPLPGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMTSNTFPSRSTKPSPKNSLPLTHSSGAFSESNTNFPQSASLPPYFSQGPGNRPLPRMEGRNFSPVPSKPRPQSPGEEENSLNEDWYVSYITRTEAEAALRKINQESHSIKRKLFPPNFQHLTSCIFLLTPNCHPQQCGRTHIETDSSNLLSFSLEISNCHLILKVLNLISCLPVLNTNLKPIYQRYFTFRILHILRLQQKSWSLKLGGTFIFFLIIGSD
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959921..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2003910))
location: region:1959921-2003910:-1
so has part: feature:2003833-2003910:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959921-1960268:-1:exon

XP_025126607.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2003910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1959921-1960268:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X6
translation: MTSMGHGFWILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPNDDADAEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPSLPPLPAAGRIHQQPLPPPQPNHEEPSRSRNHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPVISDKPSVLGGRPPGEHFPKIQKPPLPPATERHDRGSPLPGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMTSNTFPSRSTKPSPKNSLPLTHSSGAFSESNTNFPQSASLPPYFSQGPGNRPLPRMEGRNFSPVPSKPRPQSPGEEENSLNEDWYVSYITRTEAEAALRKINQESHSIKRKLFPPNFQHLTSCIFLLTPNCHPQQCGRTHIETDSSNLLSFSLEISNCHLILKVLNLISCLPVLNTNLKPIYQRYFTFRILHILRLQQKSWSLKLGGTFIFFLIIGSD
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959921..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1998631..1998656))
location: region:1959921-1998656:-1
so has part: feature:1998631-1998656:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959921-1960268:-1:exon

XP_044788569.2
type: Protein
SIO_000068: ncbiprotein

position:1998656:-1
position: 1998656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1998631-1998656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1959921-1960268:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X7
translation: MLAGARILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPNDDADAEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPSLPPLPAAGRIHQQPLPPPQPNHEEPSRSRNHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPVISDKPSVLGGRPPGEHFPKIQKPPLPPATERHDRGSPLPGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMTSNTFPSRSTKPSPKNSLPLTHSSGAFSESNTNFPQSASLPPYFSQGPGNRPLPRMEGRNFSPVPSKPRPQSPGEEENSLNEDWYVSYITRTEAEAALRKINQESHSIKRKLFPPNFQHLTSCIFLLTPNCHPQQCGRTHIETDSSNLLSFSLEISNCHLILKVLNLISCLPVLNTNLKPIYQRYFTFRILHILRLQQKSWSLKLGGTFIFFLIIGSD
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959921..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1992720..1992736))
location: region:1959921-1992736:-1
so has part: feature:1992720-1992736:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959921-1960268:-1:exon

XP_025126613.3
type: Protein
SIO_000068: ncbiprotein

position:1992736:-1
position: 1992736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1992720-1992736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1959921-1960268:-1:exon

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X3
translation: MGNTSPSVYENPCHQGGNRGWKEISGPRSAPKLLSRVLQRAADSSRSQRILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPNDDADAEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPSLPPLPAAGRIHQQPLPPPQPNHEEPSRSRNHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPVISDKPSVLGGRPPGEHFPKIQKPPLPPATERHDRGSPLPGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMTSNTFPSRSTKPSPKNSLPLTHSSGAFSESNTNFPQSASLPPYFSQGPGNRPLPRMEGRNFSPVPSKPRPQSPGEEENSLNEDWYVSYITRTEAEAALRKINQESHSIKRKLFPPNFQHLTSCIFLLTPNCHPQQCGRTHIETDSSNLLSFSLEISNCHLILKVLNLISCLPVLNTNLKPIYQRYFTFRILHILRLQQKSWSLKLGGTFIFFLIIGSD
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1959921..1960268,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1985111..1985256))
location: region:1959921-1985256:-1
so has part: feature:1985111-1985256:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1959921-1960268:-1:exon

XP_025126609.3
type: Protein
SIO_000068: ncbiprotein

position:1985256:-1
position: 1985256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985111-1985256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1959921-1960268:-1:exon

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LCP2
product: lymphocyte cytosolic protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_025270829.3
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1960127..1960692,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2004136))
location: region:1960127-2004136:-1
so has part: feature:2003833-2004136:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1960127-1960692:-1:exon

position:1960127:-1
position: 1960127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004136:-1
position: 2004136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2004136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1960127-1960692:-1:exon

position:1960692:-1
position: 1960692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2 isoform X8
translation: MAFKNVPFRSEVLNWDPNTLADYFKKLNYKDCEKVVRKYDIDGPRFLNLAENDIQKFPKLRVPILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPNDDADAEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPSLPPLPAAGRIHQQPLPPPQPNHEEPSRSRNHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPVISDKPSVLGGRPPGEHFPKIQKPPLPPATERHDRGSPLPGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMTSNTFPSRSTKPSPKNSLPLTHSSGAFSESNTNFPQSASLPPYFSQGPGNRPLPRMEGRNFSPVPSKPRPQSPGEEENSLNEDWYVSYITRTEAEAALRKINQFG
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(1960684..1960692,1960860..1960937,1961537..1961628,1965080..1965129,1966600..1966729,1967397..1967409,1969750..1969780,1971143..1971250,1971343..1971362,1971469..1971494,1975361..1975444,1975538..1975607,1977943..1978040,1980019..1980217,1983619..1983656,1984239..1984270,1984630..1984695,1993581..1993627,1998631..1998693,2003833..2003910))
location: region:1960684-2003910:-1
so has part: feature:2003833-2003910:-1:exon
so has part: feature:1998631-1998693:-1:exon
so has part: feature:1993581-1993627:-1:exon
so has part: feature:1984630-1984695:-1:exon
so has part: feature:1984239-1984270:-1:exon
so has part: feature:1983619-1983656:-1:exon
so has part: feature:1980019-1980217:-1:exon
so has part: feature:1977943-1978040:-1:exon
so has part: feature:1975538-1975607:-1:exon
so has part: feature:1975361-1975444:-1:exon
so has part: feature:1971469-1971494:-1:exon
so has part: feature:1971343-1971362:-1:exon
so has part: feature:1971143-1971250:-1:exon
so has part: feature:1969750-1969780:-1:exon
so has part: feature:1967397-1967409:-1:exon
so has part: feature:1966600-1966729:-1:exon
so has part: feature:1965080-1965129:-1:exon
so has part: feature:1961537-1961628:-1:exon
so has part: feature:1960860-1960937:-1:exon
so has part: feature:1960684-1960692:-1:exon

XP_025126614.1
type: Protein
SIO_000068: ncbiprotein

position:1960684:-1
position: 1960684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003833-2003910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1998631-1998693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993581-1993627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1984630-1984695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1984239-1984270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983619-1983656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980019-1980217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1977943-1978040:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975538-1975607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1975361-1975444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1971469-1971494:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1971343-1971362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1971143-1971250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1969750-1969780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1967397-1967409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1966600-1966729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1965080-1965129:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961537-1961628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960860-1960937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1960684-1960692:-1:exon

KCNIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2059161..2462363
location: region:2059161-2462363:1
so has part: feature:2059161-2462363:1:exon
subclass of: SO_0000010

102391062
type: Gene
SIO_000068: ncbigene

position:2059161:1
position: 2059161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2462363:1
position: 2462363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2059161-2462363:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006075532.4
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2059161..2059526,2445856..2445980,2446700..2446769,2448287..2448357,2449059..2449166,2456569..2456673,2457841..2457903,2461545..2462363)
location: region:2059161-2462363:1
so has part: feature:2059161-2059526:1:exon
so has part: feature:2445856-2445980:1:exon
so has part: feature:2446700-2446769:1:exon
so has part: feature:2448287-2448357:1:exon
so has part: feature:2449059-2449166:1:exon
so has part: feature:2456569-2456673:1:exon
so has part: feature:2457841-2457903:1:exon
so has part: feature:2461545-2462363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2059161-2059526:1:exon

position:2059526:1
position: 2059526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2445856-2445980:1:exon

position:2445856:1
position: 2445856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2445980:1
position: 2445980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2446700-2446769:1:exon

position:2446700:1
position: 2446700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2446769:1
position: 2446769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2448287-2448357:1:exon

position:2448287:1
position: 2448287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2448357:1
position: 2448357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2449059-2449166:1:exon

position:2449059:1
position: 2449059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449166:1
position: 2449166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2456569-2456673:1:exon

position:2456569:1
position: 2456569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2456673:1
position: 2456673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2457841-2457903:1:exon

position:2457841:1
position: 2457841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457903:1
position: 2457903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2461545-2462363:1:exon

position:2461545:1
position: 2461545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006075529.4
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2059264..2059668,2445856..2445980,2446700..2446769,2448287..2448357,2449059..2449166,2456569..2456673,2457841..2457903,2461545..2462363)
location: region:2059264-2462363:1
so has part: feature:2059264-2059668:1:exon
so has part: feature:2445856-2445980:1:exon
so has part: feature:2446700-2446769:1:exon
so has part: feature:2448287-2448357:1:exon
so has part: feature:2449059-2449166:1:exon
so has part: feature:2456569-2456673:1:exon
so has part: feature:2457841-2457903:1:exon
so has part: feature:2461545-2462363:1:exon

position:2059264:1
position: 2059264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2059264-2059668:1:exon

position:2059668:1
position: 2059668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2445856-2445980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2446700-2446769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2448287-2448357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2449059-2449166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456569-2456673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2457841-2457903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2461545-2462363:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045163645.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2059264..2059668,2445856..2445980,2446700..2446769,2448287..2448357,2449059..2449166,2456569..2456673,2461545..2462363)
location: region:2059264-2462363:1
so has part: feature:2059264-2059668:1:exon
so has part: feature:2445856-2445980:1:exon
so has part: feature:2446700-2446769:1:exon
so has part: feature:2448287-2448357:1:exon
so has part: feature:2449059-2449166:1:exon
so has part: feature:2456569-2456673:1:exon
so has part: feature:2461545-2462363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2059264-2059668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2445856-2445980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2446700-2446769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2448287-2448357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2449059-2449166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456569-2456673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2461545-2462363:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X1
translation: MQKPDSLQRQLCCSWSLWGASISQDPSRQAPSSRARKVGASLLGADNTTCLSSATMSGCSKRCKLGFVKFAQTIFKLITGTLSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFHAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDIFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2059416..2059668,2445856..2445980,2446700..2446769,2448287..2448357,2449059..2449166,2456569..2456673,2457841..2457903,2461545..2461592)
location: region:2059416-2461592:1
so has part: feature:2059416-2059668:1:exon
so has part: feature:2445856-2445980:1:exon
so has part: feature:2446700-2446769:1:exon
so has part: feature:2448287-2448357:1:exon
so has part: feature:2449059-2449166:1:exon
so has part: feature:2456569-2456673:1:exon
so has part: feature:2457841-2457903:1:exon
so has part: feature:2461545-2461592:1:exon

XP_006075591.3
type: Protein
SIO_000068: ncbiprotein

position:2059416:1
position: 2059416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461592:1
position: 2461592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2059416-2059668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2445856-2445980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2446700-2446769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2448287-2448357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2449059-2449166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456569-2456673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2457841-2457903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2461545-2461592:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X2
translation: MQKPDSLQRQLCCSWSLWGASISQDPSRQAPSSRARKVGASLLGADNTTCLSSATMSGCSKRCKLGFVKFAQTIFKLITGTLSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFHAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDIFFQDDNIMRSLQLFQNVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2059416..2059668,2445856..2445980,2446700..2446769,2448287..2448357,2449059..2449166,2456569..2456673,2461545..2461592)
location: region:2059416-2461592:1
so has part: feature:2059416-2059668:1:exon
so has part: feature:2445856-2445980:1:exon
so has part: feature:2446700-2446769:1:exon
so has part: feature:2448287-2448357:1:exon
so has part: feature:2449059-2449166:1:exon
so has part: feature:2456569-2456673:1:exon
so has part: feature:2461545-2461592:1:exon

XP_045019580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2059416-2059668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2445856-2445980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2446700-2446769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2448287-2448357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2449059-2449166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456569-2456673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2461545-2461592:1:exon

KCNMB1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2077720..2094053)
location: region:2077720-2094053:-1
so has part: feature:2077720-2094053:-1:exon
subclass of: SO_0000010

102392300
type: Gene
SIO_000068: ncbigene

position:2077720:-1
position: 2077720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2094053:-1
position: 2094053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2077720-2094053:-1:exon

KCNMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: KCNMB1
product: potassium calcium-activated channel subfamily M regulatory beta subunit 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006075533.4
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(2077720..2082824,2088006..2088177,2089536..2089693,2093728..2094053))
location: region:2077720-2094053:-1
so has part: feature:2093728-2094053:-1:exon
so has part: feature:2089536-2089693:-1:exon
so has part: feature:2088006-2088177:-1:exon
so has part: feature:2077720-2082824:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2093728-2094053:-1:exon

position:2093728:-1
position: 2093728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2089536-2089693:-1:exon

position:2089536:-1
position: 2089536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2089693:-1
position: 2089693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2088006-2088177:-1:exon

position:2088006:-1
position: 2088006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2088177:-1
position: 2088177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2077720-2082824:-1:exon

position:2082824:-1
position: 2082824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-activated potassium channel subunit beta-1
translation: MGKKLVMAQRRGETRALCLGVAMVVGAVITYYILGTTVLPLYQKSVWTQESTCHLIETNIRDQEELEGKRVPQYPCLWVNVSSVGRWAVLYHTEDTRDQNHQCSYIPSSLDNYQVARADVEKVRARFHEHQDFFCFSTTRENETSVLYRRLYGPQSLLFSLFWPTFLLTGGLLIIIMVKINQSLSILAAQR
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(2082555..2082824,2088006..2088177,2089536..2089669))
location: region:2082555-2089669:-1
so has part: feature:2089536-2089669:-1:exon
so has part: feature:2088006-2088177:-1:exon
so has part: feature:2082555-2082824:-1:exon

XP_006075595.2
type: Protein
SIO_000068: ncbiprotein

position:2082555:-1
position: 2082555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2089669:-1
position: 2089669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2089536-2089669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2088006-2088177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2082555-2082824:-1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006075531.4
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2206040..2206155,2445856..2445980,2446700..2446769,2448287..2448357,2449059..2449166,2456569..2456673,2457841..2457903,2461545..2462363)
location: region:2206040-2462363:1
so has part: feature:2206040-2206155:1:exon
so has part: feature:2445856-2445980:1:exon
so has part: feature:2446700-2446769:1:exon
so has part: feature:2448287-2448357:1:exon
so has part: feature:2449059-2449166:1:exon
so has part: feature:2456569-2456673:1:exon
so has part: feature:2457841-2457903:1:exon
so has part: feature:2461545-2462363:1:exon

position:2206040:1
position: 2206040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2206040-2206155:1:exon

position:2206155:1
position: 2206155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2445856-2445980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2446700-2446769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2448287-2448357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2449059-2449166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456569-2456673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2457841-2457903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2461545-2462363:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X3
translation: MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFHAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDIFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2206095..2206155,2445856..2445980,2446700..2446769,2448287..2448357,2449059..2449166,2456569..2456673,2457841..2457903,2461545..2461592)
location: region:2206095-2461592:1
so has part: feature:2206095-2206155:1:exon
so has part: feature:2445856-2445980:1:exon
so has part: feature:2446700-2446769:1:exon
so has part: feature:2448287-2448357:1:exon
so has part: feature:2449059-2449166:1:exon
so has part: feature:2456569-2456673:1:exon
so has part: feature:2457841-2457903:1:exon
so has part: feature:2461545-2461592:1:exon

XP_006075593.2
type: Protein
SIO_000068: ncbiprotein

position:2206095:1
position: 2206095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2206095-2206155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2445856-2445980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2446700-2446769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2448287-2448357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2449059-2449166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456569-2456673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2457841-2457903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2461545-2461592:1:exon

TRNAC-ACA
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: TRNAC-ACA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2251833..2251905)
location: region:2251833-2251905:-1
so has part: feature:2251833-2251905:-1:exon
subclass of: SO_0000663

112580757
type: Gene
SIO_000068: ncbigene

position:2251833:-1
position: 2251833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2251905:-1
position: 2251905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2251833-2251905:-1:exon

TRNAC-ACA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 89462
gene: TRNAC-ACA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon ACA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2251870..2251872),aa:Cys, seq:aca)
SIO_010081: TRNAC-ACA
subclass of: SO_0000673
so part of: TRNAC-ACA
location: complement(2251833..2251905)
location: region:2251833-2251905:-1
so has part: feature:2251833-2251905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2251833-2251905:-1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X4
translation: MTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFHAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDIFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2445879..2445980,2446700..2446769,2448287..2448357,2449059..2449166,2456569..2456673,2457841..2457903,2461545..2461592)
location: region:2445879-2461592:1
so has part: feature:2445879-2445980:1:exon
so has part: feature:2446700-2446769:1:exon
so has part: feature:2448287-2448357:1:exon
so has part: feature:2449059-2449166:1:exon
so has part: feature:2456569-2456673:1:exon
so has part: feature:2457841-2457903:1:exon
so has part: feature:2461545-2461592:1:exon

XP_006075594.2
type: Protein
SIO_000068: ncbiprotein

position:2445879:1
position: 2445879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2445879-2445980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2446700-2446769:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2448287-2448357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2449059-2449166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2456569-2456673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2457841-2457903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2461545-2461592:1:exon

LOC102392612
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC102392612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2500507..2527696
location: region:2500507-2527696:1
so has part: feature:2500507-2527696:1:exon
subclass of: SO_0000010

102392612
type: Gene
SIO_000068: ncbigene

position:2500507:1
position: 2500507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527696:1
position: 2527696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2500507-2527696:1:exon

LOC102392612
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LOC102392612
product: gamma-aminobutyric acid type A receptor subunit pi, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006075534.4
SIO_010081: LOC102392612
subclass of: SO_0000673
so part of: LOC102392612
location: join(2500507..2500672,2505968..2506064,2506776..2506894,2511605..2511672,2512408..2512625,2514278..2514360,2517752..2517889,2518351..2518503,2518949..2519136,2525803..2527696)
location: region:2500507-2527696:1
so has part: feature:2500507-2500672:1:exon
so has part: feature:2505968-2506064:1:exon
so has part: feature:2506776-2506894:1:exon
so has part: feature:2511605-2511672:1:exon
so has part: feature:2512408-2512625:1:exon
so has part: feature:2514278-2514360:1:exon
so has part: feature:2517752-2517889:1:exon
so has part: feature:2518351-2518503:1:exon
so has part: feature:2518949-2519136:1:exon
so has part: feature:2525803-2527696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2500507-2500672:1:exon

position:2500672:1
position: 2500672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2505968-2506064:1:exon

position:2505968:1
position: 2505968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506064:1
position: 2506064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2506776-2506894:1:exon

position:2506776:1
position: 2506776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506894:1
position: 2506894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2511605-2511672:1:exon

position:2511605:1
position: 2511605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511672:1
position: 2511672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2512408-2512625:1:exon

position:2512408:1
position: 2512408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512625:1
position: 2512625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2514278-2514360:1:exon

position:2514278:1
position: 2514278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514360:1
position: 2514360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2517752-2517889:1:exon

position:2517752:1
position: 2517752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517889:1
position: 2517889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2518351-2518503:1:exon

position:2518351:1
position: 2518351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518503:1
position: 2518503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2518949-2519136:1:exon

position:2518949:1
position: 2518949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519136:1
position: 2519136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2525803-2527696:1:exon

position:2525803:1
position: 2525803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102392612
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LOC102392612
product: gamma-aminobutyric acid type A receptor subunit pi, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932447.2
SIO_010081: LOC102392612
subclass of: SO_0000673
so part of: LOC102392612
location: join(2500507..2500672,2506776..2506894,2511605..2511672,2512408..2512625,2514278..2514360,2517752..2517889,2518351..2518503,2518949..2519136,2525803..2527696)
location: region:2500507-2527696:1
so has part: feature:2500507-2500672:1:exon
so has part: feature:2506776-2506894:1:exon
so has part: feature:2511605-2511672:1:exon
so has part: feature:2512408-2512625:1:exon
so has part: feature:2514278-2514360:1:exon
so has part: feature:2517752-2517889:1:exon
so has part: feature:2518351-2518503:1:exon
so has part: feature:2518949-2519136:1:exon
so has part: feature:2525803-2527696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2500507-2500672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2506776-2506894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2511605-2511672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2512408-2512625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514278-2514360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2517752-2517889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2518351-2518503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2518949-2519136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2525803-2527696:1:exon

LOC102392612
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LOC102392612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi isoform X1
translation: MRRSLHLTFLWLSLFSAWMCVQGNQFNIEVSRSNKLSLPGFENLTAGYNKFLRPNFGGEPVQIAVTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGKAKEVEEVNITNIINSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKFKFVFRDKLGRIVDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWAYYMYF
SIO_010081: LOC102392612
subclass of: SO_0000673
so part of: LOC102392612
location: join(2506012..2506064,2506776..2506894,2511605..2511672,2512408..2512625,2514278..2514360,2517752..2517889,2518351..2518503,2518949..2519136,2525803..2526105)
location: region:2506012-2526105:1
so has part: feature:2506012-2506064:1:exon
so has part: feature:2506776-2506894:1:exon
so has part: feature:2511605-2511672:1:exon
so has part: feature:2512408-2512625:1:exon
so has part: feature:2514278-2514360:1:exon
so has part: feature:2517752-2517889:1:exon
so has part: feature:2518351-2518503:1:exon
so has part: feature:2518949-2519136:1:exon
so has part: feature:2525803-2526105:1:exon

XP_006075596.3
type: Protein
SIO_000068: ncbiprotein

position:2506012:1
position: 2506012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2526105:1
position: 2526105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2506012-2506064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2506776-2506894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2511605-2511672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2512408-2512625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514278-2514360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2517752-2517889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2518351-2518503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2518949-2519136:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2525803-2526105:1:exon

LOC102392612
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LOC102392612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi isoform X2
translation: MCVQGNQFNIEVSRSNKLSLPGFENLTAGYNKFLRPNFGGEPVQIAVTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGKAKEVEEVNITNIINSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKFKFVFRDKLGRIVDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWAYYMYF
SIO_010081: LOC102392612
subclass of: SO_0000673
so part of: LOC102392612
location: join(2506777..2506894,2511605..2511672,2512408..2512625,2514278..2514360,2517752..2517889,2518351..2518503,2518949..2519136,2525803..2526105)
location: region:2506777-2526105:1
so has part: feature:2506777-2506894:1:exon
so has part: feature:2511605-2511672:1:exon
so has part: feature:2512408-2512625:1:exon
so has part: feature:2514278-2514360:1:exon
so has part: feature:2517752-2517889:1:exon
so has part: feature:2518351-2518503:1:exon
so has part: feature:2518949-2519136:1:exon
so has part: feature:2525803-2526105:1:exon

XP_044788382.2
type: Protein
SIO_000068: ncbiprotein

position:2506777:1
position: 2506777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2506777-2506894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2511605-2511672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2512408-2512625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2514278-2514360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2517752-2517889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2518351-2518503:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2518949-2519136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2525803-2526105:1:exon

RANBP17
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2585006..2947487
location: region:2585006-2947487:1
so has part: feature:2585006-2947487:1:exon
subclass of: SO_0000010

102410142
type: Gene
SIO_000068: ncbigene

position:2585006:1
position: 2585006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947487:1
position: 2947487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585006-2947487:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: RANBP17
product: RAN binding protein 17, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270839.3
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
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urn:…
SIO_000300: 1
SIO_000628: feature:2585006-2585188:1:exon

position:2585188:1
position: 2585188
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:2599854-2600000:1:exon

position:2599854:1
position: 2599854
reference: sequence
type: ForwardStrandPosition
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position:2600000:1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:2603507-2603597:1:exon

position:2603507:1
position: 2603507
reference: sequence
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position:2603597:1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:2611783-2611949:1:exon

position:2611783:1
position: 2611783
reference: sequence
type: ForwardStrandPosition
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position:2611949:1
position: 2611949
reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:2616487-2616552:1:exon

position:2616487:1
position: 2616487
reference: sequence
type: ForwardStrandPosition
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position:2616552:1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:2622264-2622368:1:exon

position:2622264:1
position: 2622264
reference: sequence
type: ForwardStrandPosition
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position:2622368:1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:2623144-2623309:1:exon

position:2623144:1
position: 2623144
reference: sequence
type: ForwardStrandPosition
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position:2623309:1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:2626459-2626532:1:exon

position:2626459:1
position: 2626459
reference: sequence
type: ForwardStrandPosition
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position:2626532:1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:2628719-2628838:1:exon

position:2628719:1
position: 2628719
reference: sequence
type: ForwardStrandPosition
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position:2628838:1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:2630187-2630333:1:exon

position:2630187:1
position: 2630187
reference: sequence
type: ForwardStrandPosition
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position:2630333:1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:2630856-2631028:1:exon

position:2630856:1
position: 2630856
reference: sequence
type: ForwardStrandPosition
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position:2631028:1
position: 2631028
reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:2633234-2633427:1:exon

position:2633234:1
position: 2633234
reference: sequence
type: ForwardStrandPosition
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position:2633427:1
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urn:…
SIO_000300: 13
SIO_000628: feature:2673270-2673375:1:exon

position:2673270:1
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reference: sequence
type: ForwardStrandPosition
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position:2673375:1
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urn:…
SIO_000300: 14
SIO_000628: feature:2692849-2692984:1:exon

position:2692849:1
position: 2692849
reference: sequence
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position:2692984:1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:2829687-2829746:1:exon

position:2829687:1
position: 2829687
reference: sequence
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position:2829746:1
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urn:…
SIO_000300: 16
SIO_000628: feature:2838154-2838227:1:exon

position:2838154:1
position: 2838154
reference: sequence
type: ForwardStrandPosition
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position:2838227:1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:2839248-2839328:1:exon

position:2839248:1
position: 2839248
reference: sequence
type: ForwardStrandPosition
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position:2839328:1
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urn:…
SIO_000300: 18
SIO_000628: feature:2848514-2848577:1:exon

position:2848514:1
position: 2848514
reference: sequence
type: ForwardStrandPosition
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position:2848577:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:2848670-2848778:1:exon

position:2848670:1
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reference: sequence
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position:2848778:1
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urn:…
SIO_000300: 20
SIO_000628: feature:2864813-2864916:1:exon

position:2864813:1
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position:2864916:1
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urn:…
SIO_000300: 21
SIO_000628: feature:2870600-2870688:1:exon

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position:2870688:1
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urn:…
SIO_000300: 22
SIO_000628: feature:2880348-2880455:1:exon

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position:2880455:1
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urn:…
SIO_000300: 23
SIO_000628: feature:2882604-2882686:1:exon

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reference: sequence
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position:2882686:1
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urn:…
SIO_000300: 24
SIO_000628: feature:2894182-2894396:1:exon

position:2894182:1
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reference: sequence
type: ForwardStrandPosition
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position:2894396:1
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urn:…
SIO_000300: 25
SIO_000628: feature:2898649-2898787:1:exon

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position:2898787:1
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urn:…
SIO_000300: 26
SIO_000628: feature:2915706-2915872:1:exon

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position:2915872:1
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urn:…
SIO_000300: 27
SIO_000628: feature:2943006-2943104:1:exon

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reference: sequence
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position:2943104:1
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urn:…
SIO_000300: 28
SIO_000628: feature:2944975-2945102:1:exon

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reference: sequence
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position:2945102:1
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urn:…
SIO_000300: 29
SIO_000628: feature:2947071-2947487:1:exon

position:2947071:1
position: 2947071
reference: sequence
type: ForwardStrandPosition
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RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: RANBP17
product: RAN binding protein 17, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932591.2
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2585006..2585188,2599854..2600000,2603507..2603597,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2947071..2947487)
location: region:2585006-2947487:1
so has part: feature:2585006-2585188:1:exon
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so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2947071-2947487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2585006-2585188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2599854-2600000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2603507-2603597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2947071-2947487:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: RANBP17
product: RAN binding protein 17, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932590.2
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2585006..2585188,2599854..2600000,2603507..2603597,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947487)
location: region:2585006-2947487:1
so has part: feature:2585006-2585188:1:exon
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so has part: feature:2630187-2630333:1:exon
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so has part: feature:2839248-2839328:1:exon
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so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
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so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2585006-2585188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2599854-2600000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2603507-2603597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2947071-2947487:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: RANBP17
product: RAN binding protein 17, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270841.3
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2585006..2585188,2599854..2600000,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947487)
location: region:2585006-2947487:1
so has part: feature:2585006-2585188:1:exon
so has part: feature:2599854-2600000:1:exon
so has part: feature:2611783-2611949:1:exon
so has part: feature:2616487-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2829687-2829746:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2585006-2585188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2599854-2600000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2947071-2947487:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: RANBP17
product: RAN binding protein 17, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932594.2
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2585007..2585188,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947487)
location: region:2585007-2947487:1
so has part: feature:2585007-2585188:1:exon
so has part: feature:2611783-2611949:1:exon
so has part: feature:2616487-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2829687-2829746:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947487:1:exon

position:2585007:1
position: 2585007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585007-2585188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2947071-2947487:1:exon

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X1
translation: MALHFQSLAELEALCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAATCLSKLVSRVSPLPVEQRIDIRNYILNYVASQPKLAPFVIQALIQVIAKITKSGWFEVQKDRFVFREIIADVKTFLQGAMEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDILVLACSLLKEILAKPLNLQDQDQQNLVMQVLKLVLNCLNFDFIGSSADESADDLCTVQIPTTWRAIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLESVAVVVRDHLDDPLDDTTTVFQQLEQLCTVSRCEYEKTCTLLVQLFDQNAQNYQKLLHSASRVPVDMAIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPQCSNEKIELAILWFLDQFRKTYVGDQLQRTSKVVRLRSDVSRVPEKAWKVVKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISGSYSLSDFRCRTAFYTALTRLLMVDLGEEEDEFENFMLPLTVSFETVLQIFNNNFKQEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPILQRAIEQWYGEPACTTPILKLMAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLDPPVLLYVLTSISEGLTALDTVVSSSCCTSLDYIVTYLFKHIAKEGKKSLRCREATQAGQRLLHFMQQNPEVLQQMMSVLMNTVVFEDCRNQWSVSRPLLGLILLNEKYFGELRAGLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDMAEALRSEGSAEPLGMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2585171..2585188,2599854..2600000,2603507..2603597,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947161)
location: region:2585171-2947161:1
so has part: feature:2585171-2585188:1:exon
so has part: feature:2599854-2600000:1:exon
so has part: feature:2603507-2603597:1:exon
so has part: feature:2611783-2611949:1:exon
so has part: feature:2616487-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2829687-2829746:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947161:1:exon

XP_025126624.1
type: Protein
SIO_000068: ncbiprotein

position:2585171:1
position: 2585171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947161:1
position: 2947161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585171-2585188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2599854-2600000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2603507-2603597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2947071-2947161:1:exon

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X2
translation: MALHFQSLAELEALCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAATCLSKLVSRVSPLPVEQRIDIRNYILNYVASQPKLAPFVIQALIQVIAKITKSGWFEVQKDRFVFREIIADVKTFLQGAMEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDILVLACSLLKEILAKPLNLQDQDQQNLVMQVLKLVLNCLNFDFIGSSADESADDLCTVQIPTTWRAIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLESVAVVVRDHLDDPLDDTTTVFQQLEQLCTVSRCEYEKTCTLLVQLFDQNAQNYQKLLHSASRVPVDMAIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPQCSNEKIELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISGSYSLSDFRCRTAFYTALTRLLMVDLGEEEDEFENFMLPLTVSFETVLQIFNNNFKQEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPILQRAIEQWYGEPACTTPILKLMAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLDPPVLLYVLTSISEGLTALDTVVSSSCCTSLDYIVTYLFKHIAKEGKKSLRCREATQAGQRLLHFMQQNPEVLQQMMSVLMNTVVFEDCRNQWSVSRPLLGLILLNEKYFGELRAGLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDMAEALRSEGSAEPLGMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2585171..2585188,2599854..2600000,2603507..2603597,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947161)
location: region:2585171-2947161:1
so has part: feature:2585171-2585188:1:exon
so has part: feature:2599854-2600000:1:exon
so has part: feature:2603507-2603597:1:exon
so has part: feature:2611783-2611949:1:exon
so has part: feature:2616487-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947161:1:exon

XP_044788525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2585171-2585188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2599854-2600000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2603507-2603597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2947071-2947161:1:exon

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X4
translation: MALHFQSLAELEALCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAATCLSKLVSRVSPLPVEQRIDIRNYILNYVASQPKLAPFVIQALIQVIAKITKSGWFEVQKDRFVFREIIADVKTFLQGAMEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDILVLACSLLKEILAKPLNLQDQDQQNLVMQVLKLVLNCLNFDFIGSSADESADDLCTVQIPTTWRAIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLESVAVVVRDHLDDPLDDTTTVFQQLEQLCTVSRCEYEKTCTLLVQLFDQNAQNYQKLLHSASRVPVDMAIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPQCSNEKIELAILWFLDQFRKTYVGDQLQRTSKVVRLRSDVSRVPEKAWKVVKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISGSYSLSDFRCRTAFYTALTRLLMVDLGEEEDEFENFMLPLTVSFETVLQIFNNNFKQEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPILQRAIEQWYGEPACTTPILKLMAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLDPPVLLYVLTSISEGLTALDTVVSSSCCTSLDYIVTYLFKHIAKEGKKSLRCREATQAGQRLLHFMQQNPEVLQQVHPEPLRLQKRHG
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2585171..2585188,2599854..2600000,2603507..2603597,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2947071..2947112)
location: region:2585171-2947112:1
so has part: feature:2585171-2585188:1:exon
so has part: feature:2599854-2600000:1:exon
so has part: feature:2603507-2603597:1:exon
so has part: feature:2611783-2611949:1:exon
so has part: feature:2616487-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2829687-2829746:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2947071-2947112:1:exon

XP_044788526.1
type: Protein
SIO_000068: ncbiprotein

position:2947112:1
position: 2947112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585171-2585188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2599854-2600000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2603507-2603597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2947071-2947112:1:exon

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X3
translation: MSQQVSTFIRTRNRNYILNYVASQPKLAPFVIQALIQVIAKITKSGWFEVQKDRFVFREIIADVKTFLQGAMEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDILVLACSLLKEILAKPLNLQDQDQQNLVMQVLKLVLNCLNFDFIGSSADESADDLCTVQIPTTWRAIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLESVAVVVRDHLDDPLDDTTTVFQQLEQLCTVSRCEYEKTCTLLVQLFDQNAQNYQKLLHSASRVPVDMAIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPQCSNEKIELAILWFLDQFRKTYVGDQLQRTSKVVRLRSDVSRVPEKAWKVVKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISGSYSLSDFRCRTAFYTALTRLLMVDLGEEEDEFENFMLPLTVSFETVLQIFNNNFKQEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPILQRAIEQWYGEPACTTPILKLMAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLDPPVLLYVLTSISEGLTALDTVVSSSCCTSLDYIVTYLFKHIAKEGKKSLRCREATQAGQRLLHFMQQNPEVLQQMMSVLMNTVVFEDCRNQWSVSRPLLGLILLNEKYFGELRAGLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDMAEALRSEGSAEPLGMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2599961..2600000,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947161)
location: region:2599961-2947161:1
so has part: feature:2599961-2600000:1:exon
so has part: feature:2611783-2611949:1:exon
so has part: feature:2616487-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2829687-2829746:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947161:1:exon

XP_025126626.1
type: Protein
SIO_000068: ncbiprotein

position:2599961:1
position: 2599961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2599961-2600000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2947071-2947161:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: RANBP17
product: RAN binding protein 17, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932593.2
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2603507..2603597,2610446..2610581,2611783..2611949,2616487..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947487)
location: region:2603507-2947487:1
so has part: feature:2603507-2603597:1:exon
so has part: feature:2610446-2610581:1:exon
so has part: feature:2611783-2611949:1:exon
so has part: feature:2616487-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2829687-2829746:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2603507-2603597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2610446-2610581:1:exon

position:2610446:1
position: 2610446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2610581:1
position: 2610581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2611783-2611949:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2616487-2616552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2947071-2947487:1:exon

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X5
translation: MEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDILVLACSLLKEILAKPLNLQDQDQQNLVMQVLKLVLNCLNFDFIGSSADESADDLCTVQIPTTWRAIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLESVAVVVRDHLDDPLDDTTTVFQQLEQLCTVSRCEYEKTCTLLVQLFDQNAQNYQKLLHSASRVPVDMAIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPQCSNEKIELAILWFLDQFRKTYVGDQLQRTSKVVRLRSDVSRVPEKAWKVVKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISGSYSLSDFRCRTAFYTALTRLLMVDLGEEEDEFENFMLPLTVSFETVLQIFNNNFKQEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPILQRAIEQWYGEPACTTPILKLMAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLDPPVLLYVLTSISEGLTALDTVVSSSCCTSLDYIVTYLFKHIAKEGKKSLRCREATQAGQRLLHFMQQNPEVLQQMMSVLMNTVVFEDCRNQWSVSRPLLGLILLNEKYFGELRAGLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDMAEALRSEGSAEPLGMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2616493..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947161)
location: region:2616493-2947161:1
so has part: feature:2616493-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2829687-2829746:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947161:1:exon

XP_044788528.1
type: Protein
SIO_000068: ncbiprotein

position:2616493:1
position: 2616493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2616493-2616552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2947071-2947161:1:exon

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17 isoform X5
translation: MEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDILVLACSLLKEILAKPLNLQDQDQQNLVMQVLKLVLNCLNFDFIGSSADESADDLCTVQIPTTWRAIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLESVAVVVRDHLDDPLDDTTTVFQQLEQLCTVSRCEYEKTCTLLVQLFDQNAQNYQKLLHSASRVPVDMAIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPQCSNEKIELAILWFLDQFRKTYVGDQLQRTSKVVRLRSDVSRVPEKAWKVVKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISGSYSLSDFRCRTAFYTALTRLLMVDLGEEEDEFENFMLPLTVSFETVLQIFNNNFKQEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPILQRAIEQWYGEPACTTPILKLMAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLDPPVLLYVLTSISEGLTALDTVVSSSCCTSLDYIVTYLFKHIAKEGKKSLRCREATQAGQRLLHFMQQNPEVLQQMMSVLMNTVVFEDCRNQWSVSRPLLGLILLNEKYFGELRAGLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDMAEALRSEGSAEPLGMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2616493..2616552,2622264..2622368,2623144..2623309,2626459..2626532,2628719..2628838,2630187..2630333,2630856..2631028,2633234..2633427,2673270..2673375,2692849..2692984,2829687..2829746,2838154..2838227,2839248..2839328,2848514..2848577,2848670..2848778,2864813..2864916,2870600..2870688,2880348..2880455,2882604..2882686,2894182..2894396,2898649..2898787,2915706..2915872,2943006..2943104,2944975..2945102,2947071..2947161)
location: region:2616493-2947161:1
so has part: feature:2616493-2616552:1:exon
so has part: feature:2622264-2622368:1:exon
so has part: feature:2623144-2623309:1:exon
so has part: feature:2626459-2626532:1:exon
so has part: feature:2628719-2628838:1:exon
so has part: feature:2630187-2630333:1:exon
so has part: feature:2630856-2631028:1:exon
so has part: feature:2633234-2633427:1:exon
so has part: feature:2673270-2673375:1:exon
so has part: feature:2692849-2692984:1:exon
so has part: feature:2829687-2829746:1:exon
so has part: feature:2838154-2838227:1:exon
so has part: feature:2839248-2839328:1:exon
so has part: feature:2848514-2848577:1:exon
so has part: feature:2848670-2848778:1:exon
so has part: feature:2864813-2864916:1:exon
so has part: feature:2870600-2870688:1:exon
so has part: feature:2880348-2880455:1:exon
so has part: feature:2882604-2882686:1:exon
so has part: feature:2894182-2894396:1:exon
so has part: feature:2898649-2898787:1:exon
so has part: feature:2915706-2915872:1:exon
so has part: feature:2943006-2943104:1:exon
so has part: feature:2944975-2945102:1:exon
so has part: feature:2947071-2947161:1:exon

XP_044788529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2616493-2616552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2622264-2622368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2623144-2623309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2626459-2626532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2628719-2628838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2630187-2630333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2630856-2631028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2633234-2633427:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2673270-2673375:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2692849-2692984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2829687-2829746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2838154-2838227:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2839248-2839328:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2848514-2848577:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2848670-2848778:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2864813-2864916:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2870600-2870688:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2880348-2880455:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2882604-2882686:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2894182-2894396:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2898649-2898787:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2915706-2915872:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2943006-2943104:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2944975-2945102:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2947071-2947161:1:exon

TLX3
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2956745..2959893
location: region:2956745-2959893:1
so has part: feature:2956745-2959893:1:exon
subclass of: SO_0000010

102409810
type: Gene
SIO_000068: ncbigene

position:2956745:1
position: 2956745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959893:1
position: 2959893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2956745-2959893:1:exon

TLX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: TLX3
product: T cell leukemia homeobox 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006053702.3
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(2956745..2957602,2957959..2958202,2959136..2959893)
location: region:2956745-2959893:1
so has part: feature:2956745-2957602:1:exon
so has part: feature:2957959-2958202:1:exon
so has part: feature:2959136-2959893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2956745-2957602:1:exon

position:2957602:1
position: 2957602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2957959-2958202:1:exon

position:2957959:1
position: 2957959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958202:1
position: 2958202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2959136-2959893:1:exon

position:2959136:1
position: 2959136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell leukemia homeobox protein 3
translation: MTQSLSGPRTLGKVSVRREAPGTPWPRRNGDPAASPPSPAQPFRPPRMEASASAQTPHPHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRPGATYPSLPTSFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(2957041..2957602,2957959..2958202,2959136..2959346)
location: region:2957041-2959346:1
so has part: feature:2957041-2957602:1:exon
so has part: feature:2957959-2958202:1:exon
so has part: feature:2959136-2959346:1:exon

XP_006053764.2
type: Protein
SIO_000068: ncbiprotein

position:2957041:1
position: 2957041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959346:1
position: 2959346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2957041-2957602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2957959-2958202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2959136-2959346:1:exon

NPM1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3002822..3015766
location: region:3002822-3015766:1
so has part: feature:3002822-3015766:1:exon
subclass of: SO_0000010

102411698
type: Gene
SIO_000068: ncbigene

position:3002822:1
position: 3002822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3015766:1
position: 3015766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002822-3015766:1:exon

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: NPM1
product: nucleophosmin 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270842.2
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3002822..3002989,3004768..3004847,3005405..3005524,3005816..3005909,3006112..3006218,3006314..3006384,3009831..3009885,3010240..3010323,3011060..3011161,3012925..3012999,3015414..3015766)
location: region:3002822-3015766:1
so has part: feature:3002822-3002989:1:exon
so has part: feature:3004768-3004847:1:exon
so has part: feature:3005405-3005524:1:exon
so has part: feature:3005816-3005909:1:exon
so has part: feature:3006112-3006218:1:exon
so has part: feature:3006314-3006384:1:exon
so has part: feature:3009831-3009885:1:exon
so has part: feature:3010240-3010323:1:exon
so has part: feature:3011060-3011161:1:exon
so has part: feature:3012925-3012999:1:exon
so has part: feature:3015414-3015766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3002822-3002989:1:exon

position:3002989:1
position: 3002989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3004768-3004847:1:exon

position:3004768:1
position: 3004768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3004847:1
position: 3004847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3005405-3005524:1:exon

position:3005405:1
position: 3005405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3005524:1
position: 3005524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3005816-3005909:1:exon

position:3005816:1
position: 3005816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3005909:1
position: 3005909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3006112-3006218:1:exon

position:3006112:1
position: 3006112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3006218:1
position: 3006218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3006314-3006384:1:exon

position:3006314:1
position: 3006314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3006384:1
position: 3006384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3009831-3009885:1:exon

position:3009831:1
position: 3009831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3009885:1
position: 3009885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3010240-3010323:1:exon

position:3010240:1
position: 3010240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3010323:1
position: 3010323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3011060-3011161:1:exon

position:3011060:1
position: 3011060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3011161:1
position: 3011161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3012925-3012999:1:exon

position:3012925:1
position: 3012925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3012999:1
position: 3012999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3015414-3015766:1:exon

position:3015414:1
position: 3015414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: NPM1
product: nucleophosmin 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270843.2
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3002822..3002989,3004768..3004847,3005405..3005524,3005816..3005909,3006112..3006218,3006314..3006384,3009831..3009885,3010240..3010323,3011060..3011161,3012169..3012489)
location: region:3002822-3012489:1
so has part: feature:3002822-3002989:1:exon
so has part: feature:3004768-3004847:1:exon
so has part: feature:3005405-3005524:1:exon
so has part: feature:3005816-3005909:1:exon
so has part: feature:3006112-3006218:1:exon
so has part: feature:3006314-3006384:1:exon
so has part: feature:3009831-3009885:1:exon
so has part: feature:3010240-3010323:1:exon
so has part: feature:3011060-3011161:1:exon
so has part: feature:3012169-3012489:1:exon

position:3012489:1
position: 3012489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002822-3002989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3004768-3004847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3005405-3005524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005816-3005909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3006112-3006218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3006314-3006384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3009831-3009885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3010240-3010323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3011060-3011161:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3012169-3012489:1:exon

position:3012169:1
position: 3012169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin isoform X1
translation: MEDSMDMDMSPLRPQNYLFGCELKADRDYHFKVDNDENEHQLSLRTVSLGAGAKDELHVVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEEEEEEEVKLLSISGKRSAPGSGSKVPQKKVKLAADEDEDDDDDDDDDDDEDDDDDDFDEEVEEKAPVKKSVRDTPAKNAQKSNQNGKDSKPSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3002932..3002989,3004768..3004847,3005405..3005524,3005816..3005909,3006112..3006218,3006314..3006384,3009831..3009885,3010240..3010323,3011060..3011161,3012925..3012999,3015414..3015452)
location: region:3002932-3015452:1
so has part: feature:3002932-3002989:1:exon
so has part: feature:3004768-3004847:1:exon
so has part: feature:3005405-3005524:1:exon
so has part: feature:3005816-3005909:1:exon
so has part: feature:3006112-3006218:1:exon
so has part: feature:3006314-3006384:1:exon
so has part: feature:3009831-3009885:1:exon
so has part: feature:3010240-3010323:1:exon
so has part: feature:3011060-3011161:1:exon
so has part: feature:3012925-3012999:1:exon
so has part: feature:3015414-3015452:1:exon

XP_025126627.1
type: Protein
SIO_000068: ncbiprotein

position:3002932:1
position: 3002932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3015452:1
position: 3015452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002932-3002989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3004768-3004847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3005405-3005524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005816-3005909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3006112-3006218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3006314-3006384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3009831-3009885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3010240-3010323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3011060-3011161:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3012925-3012999:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3015414-3015452:1:exon

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin isoform X2
translation: MEDSMDMDMSPLRPQNYLFGCELKADRDYHFKVDNDENEHQLSLRTVSLGAGAKDELHVVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEEEEEEEVKLLSISGKRSAPGSGSKVPQKKVKLAADEDEDDDDDDDDDDDEDDDDDDFDEEVEEKAPVKKSVRDTPAKNAQKSNQNGKDSKPSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKAH
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3002932..3002989,3004768..3004847,3005405..3005524,3005816..3005909,3006112..3006218,3006314..3006384,3009831..3009885,3010240..3010323,3011060..3011161,3012169..3012177)
location: region:3002932-3012177:1
so has part: feature:3002932-3002989:1:exon
so has part: feature:3004768-3004847:1:exon
so has part: feature:3005405-3005524:1:exon
so has part: feature:3005816-3005909:1:exon
so has part: feature:3006112-3006218:1:exon
so has part: feature:3006314-3006384:1:exon
so has part: feature:3009831-3009885:1:exon
so has part: feature:3010240-3010323:1:exon
so has part: feature:3011060-3011161:1:exon
so has part: feature:3012169-3012177:1:exon

XP_025126628.1
type: Protein
SIO_000068: ncbiprotein

position:3012177:1
position: 3012177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002932-3002989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3004768-3004847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3005405-3005524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005816-3005909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3006112-3006218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3006314-3006384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3009831-3009885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3010240-3010323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3011060-3011161:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3012169-3012177:1:exon

FGF18
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3024334..3060105
location: region:3024334-3060105:1
so has part: feature:3024334-3060105:1:exon
subclass of: SO_0000010

102409475
type: Gene
SIO_000068: ncbigene

position:3024334:1
position: 3024334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3060105:1
position: 3060105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024334-3060105:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: FGF18
product: fibroblast growth factor 18
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006053701.4
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(3024334..3024517,3024689..3024725,3039580..3039760,3051971..3052077,3058986..3060105)
location: region:3024334-3060105:1
so has part: feature:3024334-3024517:1:exon
so has part: feature:3024689-3024725:1:exon
so has part: feature:3039580-3039760:1:exon
so has part: feature:3051971-3052077:1:exon
so has part: feature:3058986-3060105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3024334-3024517:1:exon

position:3024517:1
position: 3024517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3024689-3024725:1:exon

position:3024689:1
position: 3024689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3024725:1
position: 3024725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3039580-3039760:1:exon

position:3039580:1
position: 3039580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039760:1
position: 3039760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3051971-3052077:1:exon

position:3051971:1
position: 3051971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3052077:1
position: 3052077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3058986-3060105:1:exon

position:3058986:1
position: 3058986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18
translation: MYSAPSACTCLCLHFLLLCFQVQVLAAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPKGQAELQKPFKYTTVTKRSRRIRPTHPG
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(3024486..3024517,3024689..3024725,3039580..3039760,3051971..3052077,3058986..3059252)
location: region:3024486-3059252:1
so has part: feature:3024486-3024517:1:exon
so has part: feature:3024689-3024725:1:exon
so has part: feature:3039580-3039760:1:exon
so has part: feature:3051971-3052077:1:exon
so has part: feature:3058986-3059252:1:exon

XP_006053763.1
type: Protein
SIO_000068: ncbiprotein

position:3024486:1
position: 3024486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3059252:1
position: 3059252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024486-3024517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3024689-3024725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3039580-3039760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3051971-3052077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3058986-3059252:1:exon

LOC112580729
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112580729
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3139149..3139253
location: region:3139149-3139253:1
so has part: feature:3139149-3139253:1:exon
subclass of: SO_0000623

112580729
type: Gene
SIO_000068: ncbigene

position:3139149:1
position: 3139149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3139253:1
position: 3139253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3139149-3139253:1:exon

LOC112580729
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: snRNA
gene: LOC112580729
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003105068.1
SIO_010081: LOC112580729
subclass of: SO_0000673
so part of: LOC112580729
location: 3139149..3139253
location: region:3139149-3139253:1
so has part: feature:3139149-3139253:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3139149-3139253:1:exon

LOC123330624
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3181638..3183750
location: region:3181638-3183750:1
so has part: feature:3181638-3183750:1:exon
subclass of: SO_0000011

123330624
type: Gene
SIO_000068: ncbigene

position:3181638:1
position: 3181638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3183750:1
position: 3183750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3181638-3183750:1:exon

LOC123330624
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330624
product: uncharacterized LOC123330624
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006546650.2
SIO_010081: LOC123330624
subclass of: SO_0000673
so part of: LOC123330624
location: join(3181638..3181829,3182264..3182496,3183210..3183750)
location: region:3181638-3183750:1
so has part: feature:3181638-3181829:1:exon
so has part: feature:3182264-3182496:1:exon
so has part: feature:3183210-3183750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3181638-3181829:1:exon

position:3181829:1
position: 3181829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3182264-3182496:1:exon

position:3182264:1
position: 3182264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3182496:1
position: 3182496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3183210-3183750:1:exon

position:3183210:1
position: 3183210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123330667
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330667
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3231365..3231467
location: region:3231365-3231467:1
so has part: feature:3231365-3231467:1:exon
subclass of: SO_0000623

123330667
type: Gene
SIO_000068: ncbigene

position:3231365:1
position: 3231365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231467:1
position: 3231467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3231365-3231467:1:exon

LOC123330667
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: snRNA
gene: LOC123330667
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006546740.2
SIO_010081: LOC123330667
subclass of: SO_0000673
so part of: LOC123330667
location: 3231365..3231467
location: region:3231365-3231467:1
so has part: feature:3231365-3231467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3231365-3231467:1:exon

LOC123330573
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3329285..3348776)
location: region:3329285-3348776:-1
so has part: feature:3329285-3348776:-1:exon
subclass of: SO_0000011

123330573
type: Gene
SIO_000068: ncbigene

position:3329285:-1
position: 3329285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3348776:-1
position: 3348776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3329285-3348776:-1:exon

LOC123330573
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330573
product: uncharacterized LOC123330573, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546589.2
SIO_010081: LOC123330573
subclass of: SO_0000673
so part of: LOC123330573
location: complement(join(3329285..3332203,3347407..3348776))
location: region:3329285-3348776:-1
so has part: feature:3347407-3348776:-1:exon
so has part: feature:3329285-3332203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3347407-3348776:-1:exon

position:3347407:-1
position: 3347407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3329285-3332203:-1:exon

position:3332203:-1
position: 3332203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123330573
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330573
product: uncharacterized LOC123330573, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546590.2
SIO_010081: LOC123330573
subclass of: SO_0000673
so part of: LOC123330573
location: complement(join(3329285..3332203,3334485..3334808))
location: region:3329285-3334808:-1
so has part: feature:3334485-3334808:-1:exon
so has part: feature:3329285-3332203:-1:exon

position:3334808:-1
position: 3334808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3334485-3334808:-1:exon

position:3334485:-1
position: 3334485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3329285-3332203:-1:exon

SMIM23
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: SMIM23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3396358..3401349
location: region:3396358-3401349:1
so has part: feature:3396358-3401349:1:exon
subclass of: SO_0000010

123465181
type: Gene
SIO_000068: ncbigene

position:3396358:1
position: 3396358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3401349:1
position: 3401349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3396358-3401349:1:exon

SMIM23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SMIM23
product: small integral membrane protein 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_045163674.1
SIO_010081: SMIM23
subclass of: SO_0000673
so part of: SMIM23
location: join(3396358..3396435,3400569..3400620,3400827..3400894,3401137..3401349)
location: region:3396358-3401349:1
so has part: feature:3396358-3396435:1:exon
so has part: feature:3400569-3400620:1:exon
so has part: feature:3400827-3400894:1:exon
so has part: feature:3401137-3401349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3396358-3396435:1:exon

position:3396435:1
position: 3396435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3400569-3400620:1:exon

position:3400569:1
position: 3400569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3400620:1
position: 3400620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3400827-3400894:1:exon

position:3400827:1
position: 3400827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3400894:1
position: 3400894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3401137-3401349:1:exon

position:3401137:1
position: 3401137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMIM23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SMIM23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 23
translation: MVVHQVGSRGRVAAERRGSRCEDRKQTLLALLVLVLYVSTGISGRSWEVSERIRECNYPQNPVTSQVFEYQTSDSPEEPIKVMRTWLKENVHVFLEKLEKEVQELEQLVRDLEEWLDVLLGEGHPEQLCSTLRNHL
SIO_010081: SMIM23
subclass of: SO_0000673
so part of: SMIM23
location: join(3396358..3396435,3400569..3400620,3400827..3400894,3401137..3401349)
location: region:3396358-3401349:1
so has part: feature:3396358-3396435:1:exon
so has part: feature:3400569-3400620:1:exon
so has part: feature:3400827-3400894:1:exon
so has part: feature:3401137-3401349:1:exon

XP_045019609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3396358-3396435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3400569-3400620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3400827-3400894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3401137-3401349:1:exon

LOC102411033
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC102411033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3433621..3481277)
location: region:3433621-3481277:-1
so has part: feature:3433621-3481277:-1:exon

102411033
type: Gene
SIO_000068: ncbigene

position:3433621:-1
position: 3433621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3481277:-1
position: 3481277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3433621-3481277:-1:exon

LOC102411033
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102411033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102411033
subclass of: SO_0000673
so part of: LOC102411033
location: complement(3433621..3435023)
location: region:3433621-3435023:-1
so has part: feature:3433621-3435023:-1:exon

position:3435023:-1
position: 3435023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3433621-3435023:-1:exon

LOC102411033
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102411033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102411033
subclass of: SO_0000673
so part of: LOC102411033
location: complement(3451928..3452032)
location: region:3451928-3452032:-1
so has part: feature:3451928-3452032:-1:exon

position:3451928:-1
position: 3451928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452032:-1
position: 3452032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3451928-3452032:-1:exon

LOC102411033
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102411033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102411033
subclass of: SO_0000673
so part of: LOC102411033
location: complement(3452126..3452262)
location: region:3452126-3452262:-1
so has part: feature:3452126-3452262:-1:exon

position:3452126:-1
position: 3452126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452262:-1
position: 3452262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3452126-3452262:-1:exon

LOC102411033
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102411033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102411033
subclass of: SO_0000673
so part of: LOC102411033
location: complement(3473844..3473977)
location: region:3473844-3473977:-1
so has part: feature:3473844-3473977:-1:exon

position:3473844:-1
position: 3473844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473977:-1
position: 3473977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3473844-3473977:-1:exon

LOC102411033
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102411033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102411033
subclass of: SO_0000673
so part of: LOC102411033
location: complement(3474149..3474348)
location: region:3474149-3474348:-1
so has part: feature:3474149-3474348:-1:exon

position:3474149:-1
position: 3474149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3474348:-1
position: 3474348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3474149-3474348:-1:exon

FBXW11
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3480285..3611242)
location: region:3480285-3611242:-1
so has part: feature:3480285-3611242:-1:exon
subclass of: SO_0000010

102408511
type: Gene
SIO_000068: ncbigene

position:3480285:-1
position: 3480285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3611242:-1
position: 3611242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3480285-3611242:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006053697.4
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3480285..3482737,3489561..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3521414..3521476,3569234..3569335,3610825..3611242))
location: region:3480285-3611242:-1
so has part: feature:3610825-3611242:-1:exon
so has part: feature:3569234-3569335:-1:exon
so has part: feature:3521414-3521476:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489561-3489746:-1:exon
so has part: feature:3480285-3482737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3611242:-1:exon

position:3610825:-1
position: 3610825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3569234-3569335:-1:exon

position:3569234:-1
position: 3569234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3569335:-1
position: 3569335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3521414-3521476:-1:exon

position:3521414:-1
position: 3521414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3521476:-1
position: 3521476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3518115-3518340:-1:exon

position:3518115:-1
position: 3518115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3518340:-1
position: 3518340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3508561-3508747:-1:exon

position:3508561:-1
position: 3508561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508747:-1
position: 3508747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3507596-3507686:-1:exon

position:3507596:-1
position: 3507596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507686:-1
position: 3507686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3500478-3500615:-1:exon

position:3500478:-1
position: 3500478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3500615:-1
position: 3500615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3498373-3498491:-1:exon

position:3498373:-1
position: 3498373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3498491:-1
position: 3498491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3496501-3496750:-1:exon

position:3496501:-1
position: 3496501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3496750:-1
position: 3496750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3493534-3493652:-1:exon

position:3493534:-1
position: 3493534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3493652:-1
position: 3493652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3491734-3491844:-1:exon

position:3491734:-1
position: 3491734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3491844:-1
position: 3491844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3490793-3490871:-1:exon

position:3490793:-1
position: 3490793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3490871:-1
position: 3490871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3489561-3489746:-1:exon

position:3489561:-1
position: 3489561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3489746:-1
position: 3489746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3480285-3482737:-1:exon

position:3482737:-1
position: 3482737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006053699.4
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3480285..3482737,3489561..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3569234..3569335,3610825..3611239))
location: region:3480285-3611239:-1
so has part: feature:3610825-3611239:-1:exon
so has part: feature:3569234-3569335:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489561-3489746:-1:exon
so has part: feature:3480285-3482737:-1:exon

position:3611239:-1
position: 3611239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3611239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569234-3569335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489561-3489746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3480285-3482737:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006053700.4
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3480285..3482737,3489561..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3521414..3521476,3602109..3602270,3610825..3611236))
location: region:3480285-3611236:-1
so has part: feature:3610825-3611236:-1:exon
so has part: feature:3602109-3602270:-1:exon
so has part: feature:3521414-3521476:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489561-3489746:-1:exon
so has part: feature:3480285-3482737:-1:exon

position:3611236:-1
position: 3611236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3611236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3602109-3602270:-1:exon

position:3602109:-1
position: 3602109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3602270:-1
position: 3602270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3521414-3521476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3489561-3489746:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3480285-3482737:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270845.3
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3480285..3482737,3489561..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3610825..3611235))
location: region:3480285-3611235:-1
so has part: feature:3610825-3611235:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489561-3489746:-1:exon
so has part: feature:3480285-3482737:-1:exon

position:3611235:-1
position: 3611235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3611235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3489561-3489746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3480285-3482737:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270844.3
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3480285..3482737,3489561..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3521414..3521476,3610825..3611235))
location: region:3480285-3611235:-1
so has part: feature:3610825-3611235:-1:exon
so has part: feature:3521414-3521476:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489561-3489746:-1:exon
so has part: feature:3480285-3482737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3611235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3521414-3521476:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489561-3489746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3480285-3482737:-1:exon

LOC102411033
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102411033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102411033
subclass of: SO_0000673
so part of: LOC102411033
location: complement(3481247..3481277)
location: region:3481247-3481277:-1
so has part: feature:3481247-3481277:-1:exon

position:3481247:-1
position: 3481247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3481247-3481277:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X5
translation: MEPDSVIEDKTIELMISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3489585..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3610825..3610869))
location: region:3489585-3610869:-1
so has part: feature:3610825-3610869:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489585-3489746:-1:exon

XP_025126630.1
type: Protein
SIO_000068: ncbiprotein

position:3489585:-1
position: 3489585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3610869:-1
position: 3610869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3610869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3489585-3489746:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X3
translation: MEPDSVIEDKTIELMNTSVMEDQNEDESPKKSTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3489585..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3521414..3521476,3610825..3610869))
location: region:3489585-3610869:-1
so has part: feature:3610825-3610869:-1:exon
so has part: feature:3521414-3521476:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489585-3489746:-1:exon

XP_025126629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3610869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3521414-3521476:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489585-3489746:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X2
translation: MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3489585..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3569234..3569335,3610825..3610869))
location: region:3489585-3610869:-1
so has part: feature:3610825-3610869:-1:exon
so has part: feature:3569234-3569335:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489585-3489746:-1:exon

XP_006053761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3610869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569234-3569335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489585-3489746:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X1
translation: MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQNTSVMEDQNEDESPKKSTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3489585..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3521414..3521476,3569234..3569335,3610825..3610869))
location: region:3489585-3610869:-1
so has part: feature:3610825-3610869:-1:exon
so has part: feature:3569234-3569335:-1:exon
so has part: feature:3521414-3521476:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489585-3489746:-1:exon

XP_006053759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3610825-3610869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3569234-3569335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3521414-3521476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3489585-3489746:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X4
translation: MEDQNEDESPKKSTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3489585..3489746,3490793..3490871,3491734..3491844,3493534..3493652,3496501..3496750,3498373..3498491,3500478..3500615,3507596..3507686,3508561..3508747,3518115..3518340,3521414..3521464))
location: region:3489585-3521464:-1
so has part: feature:3521414-3521464:-1:exon
so has part: feature:3518115-3518340:-1:exon
so has part: feature:3508561-3508747:-1:exon
so has part: feature:3507596-3507686:-1:exon
so has part: feature:3500478-3500615:-1:exon
so has part: feature:3498373-3498491:-1:exon
so has part: feature:3496501-3496750:-1:exon
so has part: feature:3493534-3493652:-1:exon
so has part: feature:3491734-3491844:-1:exon
so has part: feature:3490793-3490871:-1:exon
so has part: feature:3489585-3489746:-1:exon

XP_006053762.1
type: Protein
SIO_000068: ncbiprotein

position:3521464:-1
position: 3521464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3521414-3521464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3518115-3518340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3508561-3508747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3507596-3507686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3500478-3500615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498373-3498491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496501-3496750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493534-3493652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3491734-3491844:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3490793-3490871:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3489585-3489746:-1:exon

LOC123330613
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3611339..3620440
location: region:3611339-3620440:1
so has part: feature:3611339-3620440:1:exon
subclass of: SO_0000011

123330613
type: Gene
SIO_000068: ncbigene

position:3611339:1
position: 3611339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3620440:1
position: 3620440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3611339-3620440:1:exon

LOC123330613
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330613
product: uncharacterized LOC123330613
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_006546639.1
SIO_010081: LOC123330613
subclass of: SO_0000673
so part of: LOC123330613
location: join(3611339..3611477,3617554..3617674,3620381..3620440)
location: region:3611339-3620440:1
so has part: feature:3611339-3611477:1:exon
so has part: feature:3617554-3617674:1:exon
so has part: feature:3620381-3620440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3611339-3611477:1:exon

position:3611477:1
position: 3611477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3617554-3617674:1:exon

position:3617554:1
position: 3617554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3617674:1
position: 3617674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3620381-3620440:1:exon

position:3620381:1
position: 3620381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123330614
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3611459..3612151)
location: region:3611459-3612151:-1
so has part: feature:3611459-3612151:-1:exon
subclass of: SO_0000011

123330614
type: Gene
SIO_000068: ncbigene

position:3611459:-1
position: 3611459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3612151:-1
position: 3612151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3611459-3612151:-1:exon

LOC123330614
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330614
product: uncharacterized LOC123330614
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546640.2
SIO_010081: LOC123330614
subclass of: SO_0000673
so part of: LOC123330614
location: complement(join(3611459..3611588,3612026..3612151))
location: region:3611459-3612151:-1
so has part: feature:3612026-3612151:-1:exon
so has part: feature:3611459-3611588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3612026-3612151:-1:exon

position:3612026:-1
position: 3612026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3611459-3611588:-1:exon

position:3611588:-1
position: 3611588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123330550
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3625132..3638797)
location: region:3625132-3638797:-1
so has part: feature:3625132-3638797:-1:exon
subclass of: SO_0000011

123330550
type: Gene
SIO_000068: ncbigene

position:3625132:-1
position: 3625132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3638797:-1
position: 3638797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3625132-3638797:-1:exon

LOC123330550
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330550
product: uncharacterized LOC123330550
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546552.1
SIO_010081: LOC123330550
subclass of: SO_0000673
so part of: LOC123330550
location: complement(join(3625132..3625422,3638662..3638797))
location: region:3625132-3638797:-1
so has part: feature:3638662-3638797:-1:exon
so has part: feature:3625132-3625422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3638662-3638797:-1:exon

position:3638662:-1
position: 3638662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3625132-3625422:-1:exon

position:3625422:-1
position: 3625422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STK10
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: STK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3651396..3780222)
location: region:3651396-3780222:-1
so has part: feature:3651396-3780222:-1:exon
subclass of: SO_0000010

102408168
type: Gene
SIO_000068: ncbigene

position:3651396:-1
position: 3651396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780222:-1
position: 3780222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3651396-3780222:-1:exon

STK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: STK10
product: serine/threonine kinase 10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006053696.4
SIO_010081: STK10
subclass of: SO_0000673
so part of: STK10
location: complement(join(3651396..3653825,3658808..3658921,3661500..3661625,3662127..3662315,3664374..3664498,3666763..3666892,3670384..3670476,3681282..3681461,3681870..3681993,3687241..3687371,3689621..3690163,3691920..3692054,3701525..3701606,3702188..3702382,3703316..3703388,3720535..3720684,3727598..3727646,3752791..3752955,3779530..3780222))
location: region:3651396-3780222:-1
so has part: feature:3779530-3780222:-1:exon
so has part: feature:3752791-3752955:-1:exon
so has part: feature:3727598-3727646:-1:exon
so has part: feature:3720535-3720684:-1:exon
so has part: feature:3703316-3703388:-1:exon
so has part: feature:3702188-3702382:-1:exon
so has part: feature:3701525-3701606:-1:exon
so has part: feature:3691920-3692054:-1:exon
so has part: feature:3689621-3690163:-1:exon
so has part: feature:3687241-3687371:-1:exon
so has part: feature:3681870-3681993:-1:exon
so has part: feature:3681282-3681461:-1:exon
so has part: feature:3670384-3670476:-1:exon
so has part: feature:3666763-3666892:-1:exon
so has part: feature:3664374-3664498:-1:exon
so has part: feature:3662127-3662315:-1:exon
so has part: feature:3661500-3661625:-1:exon
so has part: feature:3658808-3658921:-1:exon
so has part: feature:3651396-3653825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3779530-3780222:-1:exon

position:3779530:-1
position: 3779530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3752791-3752955:-1:exon

position:3752791:-1
position: 3752791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3752955:-1
position: 3752955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3727598-3727646:-1:exon

position:3727598:-1
position: 3727598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3727646:-1
position: 3727646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3720535-3720684:-1:exon

position:3720535:-1
position: 3720535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3720684:-1
position: 3720684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3703316-3703388:-1:exon

position:3703316:-1
position: 3703316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3703388:-1
position: 3703388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3702188-3702382:-1:exon

position:3702188:-1
position: 3702188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3702382:-1
position: 3702382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3701525-3701606:-1:exon

position:3701525:-1
position: 3701525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3701606:-1
position: 3701606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3691920-3692054:-1:exon

position:3691920:-1
position: 3691920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3692054:-1
position: 3692054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3689621-3690163:-1:exon

position:3689621:-1
position: 3689621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690163:-1
position: 3690163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3687241-3687371:-1:exon

position:3687241:-1
position: 3687241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3687371:-1
position: 3687371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3681870-3681993:-1:exon

position:3681870:-1
position: 3681870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3681993:-1
position: 3681993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3681282-3681461:-1:exon

position:3681282:-1
position: 3681282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3681461:-1
position: 3681461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3670384-3670476:-1:exon

position:3670384:-1
position: 3670384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3670476:-1
position: 3670476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3666763-3666892:-1:exon

position:3666763:-1
position: 3666763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3666892:-1
position: 3666892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3664374-3664498:-1:exon

position:3664374:-1
position: 3664374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664498:-1
position: 3664498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3662127-3662315:-1:exon

position:3662127:-1
position: 3662127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3662315:-1
position: 3662315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3661500-3661625:-1:exon

position:3661500:-1
position: 3661500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661625:-1
position: 3661625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3658808-3658921:-1:exon

position:3658808:-1
position: 3658808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3658921:-1
position: 3658921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3651396-3653825:-1:exon

position:3653825:-1
position: 3653825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: STK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 10
translation: MAFANFRRILRLSTFEKRKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETNSEEELEDYIVEIEILATCDHPYIVKLLGAYYYDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALTFLHGKKIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLSPSKWSAEFRDFLKTALDKNPETRPSAAQLLEHPFVSSVTSNKALRELVAEAKAEVMEEIEDGRDEGDEEDAVEAASPLENHTRDSSEVSQLSIDADKLLKESPFTPPPPSQPQDGANGPSEPPGDGALPATSPLDVAPGNENGQAVPVPLRKFRPVSMGARIQVSEEKQAADQGGDLSPAASRSQKASQSRPNSSALETLRSELTNGSLELPAPGAQSLSKRDSDCGSVSTSGSTDFGTSLSADLSVNKESGSLSIKDSRLHNKTLKRTRKFVVDGVEVSITTSKIISEDEKKDEEMRFLRRQELRELRLLQKEEHRNQTQLSSKHELQLEQMHKRFEQEINAKKKFFDIELENLERQQKQQVEKMEQDHAVRRREEAKRIRLEQERDYAKFQEQLKLMKKEVKNEVEKLPRQQRKESMKQKMEEHTQKKQLLDREFVAKQKEDLELAMKRITADNRREICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVKQQLKDQYFLQRHELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGGSAAEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMLAQCESNMNELQQLQNEKCHLLIEHETQKLKALDESHNQNLKEWRDKLRPRKKALEEDLNQKKREQEMFFKMNEESECANPTSPNKVTKFFPYSSADAAS
SIO_010081: STK10
subclass of: SO_0000673
so part of: STK10
location: complement(join(3653682..3653825,3658808..3658921,3661500..3661625,3662127..3662315,3664374..3664498,3666763..3666892,3670384..3670476,3681282..3681461,3681870..3681993,3687241..3687371,3689621..3690163,3691920..3692054,3701525..3701606,3702188..3702382,3703316..3703388,3720535..3720684,3727598..3727646,3752791..3752955,3779530..3779685))
location: region:3653682-3779685:-1
so has part: feature:3779530-3779685:-1:exon
so has part: feature:3752791-3752955:-1:exon
so has part: feature:3727598-3727646:-1:exon
so has part: feature:3720535-3720684:-1:exon
so has part: feature:3703316-3703388:-1:exon
so has part: feature:3702188-3702382:-1:exon
so has part: feature:3701525-3701606:-1:exon
so has part: feature:3691920-3692054:-1:exon
so has part: feature:3689621-3690163:-1:exon
so has part: feature:3687241-3687371:-1:exon
so has part: feature:3681870-3681993:-1:exon
so has part: feature:3681282-3681461:-1:exon
so has part: feature:3670384-3670476:-1:exon
so has part: feature:3666763-3666892:-1:exon
so has part: feature:3664374-3664498:-1:exon
so has part: feature:3662127-3662315:-1:exon
so has part: feature:3661500-3661625:-1:exon
so has part: feature:3658808-3658921:-1:exon
so has part: feature:3653682-3653825:-1:exon

XP_006053758.2
type: Protein
SIO_000068: ncbiprotein

position:3653682:-1
position: 3653682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3779685:-1
position: 3779685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779530-3779685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3752791-3752955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3727598-3727646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3720535-3720684:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3703316-3703388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3702188-3702382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3701525-3701606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3691920-3692054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3689621-3690163:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3687241-3687371:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3681870-3681993:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3681282-3681461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670384-3670476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3666763-3666892:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3664374-3664498:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3662127-3662315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3661500-3661625:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3658808-3658921:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3653682-3653825:-1:exon

LOC123330620
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3691937..3699688
location: region:3691937-3699688:1
so has part: feature:3691937-3699688:1:exon
subclass of: SO_0000011

123330620
type: Gene
SIO_000068: ncbigene

position:3691937:1
position: 3691937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3699688:1
position: 3699688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3691937-3699688:1:exon

LOC123330620
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330620
product: uncharacterized LOC123330620
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_006546646.1
SIO_010081: LOC123330620
subclass of: SO_0000673
so part of: LOC123330620
location: join(3691937..3692076,3694669..3695013,3697037..3699688)
location: region:3691937-3699688:1
so has part: feature:3691937-3692076:1:exon
so has part: feature:3694669-3695013:1:exon
so has part: feature:3697037-3699688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3691937-3692076:1:exon

position:3692076:1
position: 3692076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3694669-3695013:1:exon

position:3694669:1
position: 3694669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3695013:1
position: 3695013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3697037-3699688:1:exon

position:3697037:1
position: 3697037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102407840
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC102407840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3766403..3767352
location: region:3766403-3767352:1
so has part: feature:3766403-3767352:1:exon

102407840
type: Gene
SIO_000068: ncbigene

position:3766403:1
position: 3766403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767352:1
position: 3767352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3766403-3767352:1:exon

LOC102407840
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102407840
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC102407840
subclass of: SO_0000673
so part of: LOC102407840
location: 3766403..3766590
location: region:3766403-3766590:1
so has part: feature:3766403-3766590:1:exon

position:3766590:1
position: 3766590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3766403-3766590:1:exon

LOC102407840
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102407840
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC102407840
subclass of: SO_0000673
so part of: LOC102407840
location: 3766746..3767352
location: region:3766746-3767352:1
so has part: feature:3766746-3767352:1:exon

position:3766746:1
position: 3766746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3766746-3767352:1:exon

LOC123330621
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3777053..3779509)
location: region:3777053-3779509:-1
so has part: feature:3777053-3779509:-1:exon
subclass of: SO_0000011

123330621
type: Gene
SIO_000068: ncbigene

position:3777053:-1
position: 3777053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3779509:-1
position: 3779509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3777053-3779509:-1:exon

LOC123330621
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330621
product: uncharacterized LOC123330621
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546647.2
SIO_010081: LOC123330621
subclass of: SO_0000673
so part of: LOC123330621
location: complement(join(3777053..3778281,3778521..3779509))
location: region:3777053-3779509:-1
so has part: feature:3778521-3779509:-1:exon
so has part: feature:3777053-3778281:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3778521-3779509:-1:exon

position:3778521:-1
position: 3778521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3777053-3778281:-1:exon

position:3778281:-1
position: 3778281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB9
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: EFCAB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3790635..3797165
location: region:3790635-3797165:1
so has part: feature:3790635-3797165:1:exon
subclass of: SO_0000010

102407507
type: Gene
SIO_000068: ncbigene

position:3790635:1
position: 3790635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3797165:1
position: 3797165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3790635-3797165:1:exon

EFCAB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: EFCAB9
product: EF-hand calcium binding domain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045163675.1
SIO_010081: EFCAB9
subclass of: SO_0000673
so part of: EFCAB9
location: join(3790635..3790792,3793930..3794078,3794857..3795033,3796002..3796179,3797116..3797165)
location: region:3790635-3797165:1
so has part: feature:3790635-3790792:1:exon
so has part: feature:3793930-3794078:1:exon
so has part: feature:3794857-3795033:1:exon
so has part: feature:3796002-3796179:1:exon
so has part: feature:3797116-3797165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3790635-3790792:1:exon

position:3790792:1
position: 3790792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3793930-3794078:1:exon

position:3793930:1
position: 3793930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3794078:1
position: 3794078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3794857-3795033:1:exon

position:3794857:1
position: 3794857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3795033:1
position: 3795033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3796002-3796179:1:exon

position:3796002:1
position: 3796002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3796179:1
position: 3796179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3797116-3797165:1:exon

position:3797116:1
position: 3797116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EFCAB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: EFCAB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 9
translation: MKLKQGSFLWYLYLDKLYCLLSVRNVKALVEYFHLLDVHHKKTLNDVLFYHFLHHVTDLTRNQITVVFNMLDWNAVGEIGFDQFYMLVCILLAQENHLEEQFIFRHSRPVFELLDLDGELKIGPDNLHMYNFLFNIKKQQLRDLYYNFDITGDRLLNYKEFKLFTIFSMDKYQESQKAEKEKKKEKALLKKKLSQVNESQRESLLGIKPFESINLRDKFGDWRNAAHFL
SIO_010081: EFCAB9
subclass of: SO_0000673
so part of: EFCAB9
location: join(3790657..3790792,3793930..3794078,3794857..3795033,3796002..3796179,3797116..3797165)
location: region:3790657-3797165:1
so has part: feature:3790657-3790792:1:exon
so has part: feature:3793930-3794078:1:exon
so has part: feature:3794857-3795033:1:exon
so has part: feature:3796002-3796179:1:exon
so has part: feature:3797116-3797165:1:exon

XP_045019610.1
type: Protein
SIO_000068: ncbiprotein

position:3790657:1
position: 3790657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3790657-3790792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3793930-3794078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3794857-3795033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3796002-3796179:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3797116-3797165:1:exon

UBTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: UBTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3800651..3863547)
location: region:3800651-3863547:-1
so has part: feature:3800651-3863547:-1:exon
subclass of: SO_0000010

102406996
type: Gene
SIO_000068: ncbigene

position:3800651:-1
position: 3800651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3863547:-1
position: 3863547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3800651-3863547:-1:exon

UBTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: UBTD2
product: ubiquitin domain containing 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270846.3
SIO_010081: UBTD2
subclass of: SO_0000673
so part of: UBTD2
location: complement(join(3800651..3803153,3819376..3819612,3863382..3863547))
location: region:3800651-3863547:-1
so has part: feature:3863382-3863547:-1:exon
so has part: feature:3819376-3819612:-1:exon
so has part: feature:3800651-3803153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3863382-3863547:-1:exon

position:3863382:-1
position: 3863382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3819376-3819612:-1:exon

position:3819376:-1
position: 3819376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819612:-1
position: 3819612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3800651-3803153:-1:exon

position:3803153:-1
position: 3803153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: UBTD2
product: ubiquitin domain containing 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270847.3
SIO_010081: UBTD2
subclass of: SO_0000673
so part of: UBTD2
location: complement(join(3800651..3803153,3819376..3819612,3862446..3862665))
location: region:3800651-3862665:-1
so has part: feature:3862446-3862665:-1:exon
so has part: feature:3819376-3819612:-1:exon
so has part: feature:3800651-3803153:-1:exon

position:3862665:-1
position: 3862665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3862446-3862665:-1:exon

position:3862446:-1
position: 3862446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3819376-3819612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3800651-3803153:-1:exon

UBTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: UBTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin domain-containing protein 2 isoform X1
translation: MGHRDCRGAGGWGRQGEAGTWDSNPLDSTQIQKVLGLQSSARSTPPPVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAALAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPEPPPNSGYESQLRLRLSTGKDLKLVVRSTDTVYHMKRRLHAAEGVEPASQRWFFSGRPLTDKMRLEELKIPKDYVVQVIMSQPLQNPTPVEN
SIO_010081: UBTD2
subclass of: SO_0000673
so part of: UBTD2
location: complement(join(3802756..3803153,3819376..3819612,3863382..3863523))
location: region:3802756-3863523:-1
so has part: feature:3863382-3863523:-1:exon
so has part: feature:3819376-3819612:-1:exon
so has part: feature:3802756-3803153:-1:exon

XP_025126631.1
type: Protein
SIO_000068: ncbiprotein

position:3802756:-1
position: 3802756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3863523:-1
position: 3863523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863382-3863523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3819376-3819612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3802756-3803153:-1:exon

UBTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: UBTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin domain-containing protein 2 isoform X2
translation: MGGCVGAQHDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAALAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPEPPPNSGYESQLRLRLSTGKDLKLVVRSTDTVYHMKRRLHAAEGVEPASQRWFFSGRPLTDKMRLEELKIPKDYVVQVIMSQPLQNPTPVEN
SIO_010081: UBTD2
subclass of: SO_0000673
so part of: UBTD2
location: complement(join(3802756..3803153,3819376..3819612,3862446..3862515))
location: region:3802756-3862515:-1
so has part: feature:3862446-3862515:-1:exon
so has part: feature:3819376-3819612:-1:exon
so has part: feature:3802756-3803153:-1:exon

XP_025126632.1
type: Protein
SIO_000068: ncbiprotein

position:3862515:-1
position: 3862515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3862446-3862515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3819376-3819612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3802756-3803153:-1:exon

LOC112580737
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112580737
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(3870017..3870089)
location: region:3870017-3870089:-1
so has part: feature:3870017-3870089:-1:exon

112580737
type: Gene
SIO_000068: ncbigene

position:3870017:-1
position: 3870017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3870089:-1
position: 3870089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3870017-3870089:-1:exon

LOC112580737
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC112580737
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC112580737
subclass of: SO_0000673
so part of: LOC112580737
location: complement(3870017..3870089)
location: region:3870017-3870089:-1
so has part: feature:3870017-3870089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3870017-3870089:-1:exon

SH3PXD2B
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: SH3PXD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3897583..4021840)
location: region:3897583-4021840:-1
so has part: feature:3897583-4021840:-1:exon
subclass of: SO_0000010

102410698
type: Gene
SIO_000068: ncbigene

position:3897583:-1
position: 3897583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021840:-1
position: 4021840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3897583-4021840:-1:exon

SH3PXD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: SH3PXD2B
product: SH3 and PX domains 2B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270848.3
SIO_010081: SH3PXD2B
subclass of: SO_0000673
so part of: SH3PXD2B
location: complement(join(3897583..3904028,3920180..3920305,3921176..3921225,3922819..3923045,3926076..3926193,3930926..3931030,3936709..3936843,3944621..3944646,3952440..3952531,3964388..3964464,3971317..3971392,3988418..3988498,4021621..4021840))
location: region:3897583-4021840:-1
so has part: feature:4021621-4021840:-1:exon
so has part: feature:3988418-3988498:-1:exon
so has part: feature:3971317-3971392:-1:exon
so has part: feature:3964388-3964464:-1:exon
so has part: feature:3952440-3952531:-1:exon
so has part: feature:3944621-3944646:-1:exon
so has part: feature:3936709-3936843:-1:exon
so has part: feature:3930926-3931030:-1:exon
so has part: feature:3926076-3926193:-1:exon
so has part: feature:3922819-3923045:-1:exon
so has part: feature:3921176-3921225:-1:exon
so has part: feature:3920180-3920305:-1:exon
so has part: feature:3897583-3904028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4021621-4021840:-1:exon

position:4021621:-1
position: 4021621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3988418-3988498:-1:exon

position:3988418:-1
position: 3988418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3988498:-1
position: 3988498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3971317-3971392:-1:exon

position:3971317:-1
position: 3971317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3971392:-1
position: 3971392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3964388-3964464:-1:exon

position:3964388:-1
position: 3964388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3964464:-1
position: 3964464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3952440-3952531:-1:exon

position:3952440:-1
position: 3952440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3952531:-1
position: 3952531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3944621-3944646:-1:exon

position:3944621:-1
position: 3944621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3944646:-1
position: 3944646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3936709-3936843:-1:exon

position:3936709:-1
position: 3936709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3936843:-1
position: 3936843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3930926-3931030:-1:exon

position:3930926:-1
position: 3930926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3931030:-1
position: 3931030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3926076-3926193:-1:exon

position:3926076:-1
position: 3926076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3926193:-1
position: 3926193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3922819-3923045:-1:exon

position:3922819:-1
position: 3922819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3923045:-1
position: 3923045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3921176-3921225:-1:exon

position:3921176:-1
position: 3921176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3921225:-1
position: 3921225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3920180-3920305:-1:exon

position:3920180:-1
position: 3920180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920305:-1
position: 3920305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3897583-3904028:-1:exon

position:3904028:-1
position: 3904028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3PXD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: SH3PXD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and PX domain-containing protein 2B
translation: MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRPEDLNPPKEEHVGKKKSGGDLTSVDPMVLEQYVVVADYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAMVEVIQKNLEGWWKIRYQGKEGWAPASYLRKSSGEPLPPKLAPGSPAHVGVLELDGVSRQQNSVGREKELLNNQKDGRLEGRPVPDSDIRQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKNLSGWWYIQIEDKEGWAPATFIDKYKKTSNASRPNFLAPLPNEVAQLRLGDTAAVENSSGSEASGPSRPLPDAPHGAGDSGTPWAKDWKGGKEVLRKASSDTSSCAGYEEISDPDLEEKPSLPPRKESIIKSEGELQERQRMEQFRGSSPKPPGMILPMIPAKHAPPARDSRKAEPKPEKSKLFQLKNETGLECGHRVLAKEVKKPSLRPISKSKAGPPEEKPEAVPQNLFLKSKPQVRPKPAPSPRTEPPQGEDQVDICNLRSKLRPAKSQEKASVDGESSHQAGGGQDGAFSRGFPPGEGPGRAQDRTSKQEGPSPKEAPCRAPPRPAKTTDPVPKATPVPLQEASLQRPMVPPRRPPPPKKTSSSSRPLPEVRGPLPEVRGPLPEVRGPLPEVRGPQRESSEGKAAPAPGRALLVPPKAKPFLSNSSGGQDDMRGKGGLGPRMMGKTGENKEKVAAGPFPSTDGPKDLYVAVANFEGDQDTSSFQEGTVFEVREKNSSGWWFCQVQSGAPSWEGWIPSNYLRKKP
SIO_010081: SH3PXD2B
subclass of: SO_0000673
so part of: SH3PXD2B
location: complement(join(3902430..3904028,3920180..3920305,3921176..3921225,3922819..3923045,3926076..3926193,3930926..3931030,3936709..3936843,3944621..3944646,3952440..3952531,3964388..3964464,3971317..3971392,3988418..3988498,4021621..4021695))
location: region:3902430-4021695:-1
so has part: feature:4021621-4021695:-1:exon
so has part: feature:3988418-3988498:-1:exon
so has part: feature:3971317-3971392:-1:exon
so has part: feature:3964388-3964464:-1:exon
so has part: feature:3952440-3952531:-1:exon
so has part: feature:3944621-3944646:-1:exon
so has part: feature:3936709-3936843:-1:exon
so has part: feature:3930926-3931030:-1:exon
so has part: feature:3926076-3926193:-1:exon
so has part: feature:3922819-3923045:-1:exon
so has part: feature:3921176-3921225:-1:exon
so has part: feature:3920180-3920305:-1:exon
so has part: feature:3902430-3904028:-1:exon

XP_025126633.3
type: Protein
SIO_000068: ncbiprotein

position:3902430:-1
position: 3902430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021695:-1
position: 4021695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4021621-4021695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3988418-3988498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3971317-3971392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3964388-3964464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3952440-3952531:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3944621-3944646:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3936709-3936843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3930926-3931030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3926076-3926193:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3922819-3923045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3921176-3921225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3920180-3920305:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3902430-3904028:-1:exon

LOC123330607
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4170884..4171891)
location: region:4170884-4171891:-1
so has part: feature:4170884-4171891:-1:exon
subclass of: SO_0000011

123330607
type: Gene
SIO_000068: ncbigene

position:4170884:-1
position: 4170884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4171891:-1
position: 4171891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4170884-4171891:-1:exon

LOC123330607
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330607
product: uncharacterized LOC123330607
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546631.2
SIO_010081: LOC123330607
subclass of: SO_0000673
so part of: LOC123330607
location: complement(join(4170884..4171073,4171605..4171891))
location: region:4170884-4171891:-1
so has part: feature:4171605-4171891:-1:exon
so has part: feature:4170884-4171073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4171605-4171891:-1:exon

position:4171605:-1
position: 4171605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4170884-4171073:-1:exon

position:4171073:-1
position: 4171073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEURL1B
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: NEURL1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4209043..4254774
location: region:4209043-4254774:1
so has part: feature:4209043-4254774:1:exon
subclass of: SO_0000010

102410498
type: Gene
SIO_000068: ncbigene

position:4209043:1
position: 4209043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4254774:1
position: 4254774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4209043-4254774:1:exon

NEURL1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: NEURL1B
product: neuralized E3 ubiquitin protein ligase 1B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058697.4
SIO_010081: NEURL1B
subclass of: SO_0000673
so part of: NEURL1B
location: join(4209043..4209258,4230999..4231544,4246949..4247668,4249973..4250098,4250401..4254774)
location: region:4209043-4254774:1
so has part: feature:4209043-4209258:1:exon
so has part: feature:4230999-4231544:1:exon
so has part: feature:4246949-4247668:1:exon
so has part: feature:4249973-4250098:1:exon
so has part: feature:4250401-4254774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4209043-4209258:1:exon

position:4209258:1
position: 4209258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4230999-4231544:1:exon

position:4230999:1
position: 4230999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4231544:1
position: 4231544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4246949-4247668:1:exon

position:4246949:1
position: 4246949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4247668:1
position: 4247668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4249973-4250098:1:exon

position:4249973:1
position: 4249973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4250098:1
position: 4250098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4250401-4254774:1:exon

position:4250401:1
position: 4250401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEURL1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: NEURL1B
product: neuralized E3 ubiquitin protein ligase 1B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932377.2
SIO_010081: NEURL1B
subclass of: SO_0000673
so part of: NEURL1B
location: join(4209043..4209258,4230999..4231544,4249973..4250098,4250401..4254774)
location: region:4209043-4254774:1
so has part: feature:4209043-4209258:1:exon
so has part: feature:4230999-4231544:1:exon
so has part: feature:4249973-4250098:1:exon
so has part: feature:4250401-4254774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4209043-4209258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4230999-4231544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4249973-4250098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4250401-4254774:1:exon

NEURL1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: NEURL1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase NEURL1B isoform X1
translation: MGNTVHRTLPESSPPARLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESGFADTLTPARLGQARFSACLPPSSHDAANFDNNELENNQVVAKLGHLALSRAPGPAPADHAAAAIPCGPRERQRPSSSPALLEADLRFHATRGPDVSLSLDRKVACAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGGLRPAELPADPDALIDRKEYWVVARAGPVPSGGDALSFTLRPGGDVLLGVNGRPRGRLLCVDTTQALWAFFAVRGGAAGQLRLLGTLQSSPATTSPSGSLSGSQDDSDSDMAFSVNQSSSASESSLVTAPSSPLSPPVSPVSSPPELVGSKSSECTVCFDGEVDTVIYTCGHMCLCHGCGLRLKRQARACCPICRRPIKDVIKTYRP
SIO_010081: NEURL1B
subclass of: SO_0000673
so part of: NEURL1B
location: join(4209228..4209258,4230999..4231544,4246949..4247668,4249973..4250098,4250401..4250645)
location: region:4209228-4250645:1
so has part: feature:4209228-4209258:1:exon
so has part: feature:4230999-4231544:1:exon
so has part: feature:4246949-4247668:1:exon
so has part: feature:4249973-4250098:1:exon
so has part: feature:4250401-4250645:1:exon

XP_006058759.1
type: Protein
SIO_000068: ncbiprotein

position:4209228:1
position: 4209228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4250645:1
position: 4250645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4209228-4209258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4230999-4231544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4246949-4247668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4249973-4250098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4250401-4250645:1:exon

NEURL1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: NEURL1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase NEURL1B isoform X2
translation: MGNTVHRTLPESSPPARLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALIDVYGITDEVQLLGTLQSSPATTSPSGSLSGSQDDSDSDMAFSVNQSSSASESSLVTAPSSPLSPPVSPVSSPPELVGSKSSECTVCFDGEVDTVIYTCGHMCLCHGCGLRLKRQARACCPICRRPIKDVIKTYRP
SIO_010081: NEURL1B
subclass of: SO_0000673
so part of: NEURL1B
location: join(4209228..4209258,4230999..4231544,4249973..4250098,4250401..4250645)
location: region:4209228-4250645:1
so has part: feature:4209228-4209258:1:exon
so has part: feature:4230999-4231544:1:exon
so has part: feature:4249973-4250098:1:exon
so has part: feature:4250401-4250645:1:exon

XP_044788312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4209228-4209258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4230999-4231544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4249973-4250098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4250401-4250645:1:exon

DUSP1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: DUSP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4346121..4349218)
location: region:4346121-4349218:-1
so has part: feature:4346121-4349218:-1:exon
subclass of: SO_0000010

102410828
type: Gene
SIO_000068: ncbigene

position:4346121:-1
position: 4346121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4349218:-1
position: 4349218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4346121-4349218:-1:exon

DUSP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: DUSP1
product: dual specificity phosphatase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058698.4
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(4346121..4347172,4347603..4347822,4348193..4348338,4348600..4349218))
location: region:4346121-4349218:-1
so has part: feature:4348600-4349218:-1:exon
so has part: feature:4348193-4348338:-1:exon
so has part: feature:4347603-4347822:-1:exon
so has part: feature:4346121-4347172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4348600-4349218:-1:exon

position:4348600:-1
position: 4348600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4348193-4348338:-1:exon

position:4348193:-1
position: 4348193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4348338:-1
position: 4348338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4347603-4347822:-1:exon

position:4347603:-1
position: 4347603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4347822:-1
position: 4347822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4346121-4347172:-1:exon

position:4347172:-1
position: 4347172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUSP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: DUSP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 1
translation: MVMEVVSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELRGRLLAGTYHAVVLLDERSAALDCAKRDGTLALAAGALCREARSAQIFLLKGGYEAFSASYPELCSKQSTPMGLSLPLSTSVPDSAESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDCSTSTTTVFNFPVSIPVHPTNSALSYLQSPITTSPSC
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(4346802..4347172,4347603..4347822,4348193..4348338,4348600..4348966))
location: region:4346802-4348966:-1
so has part: feature:4348600-4348966:-1:exon
so has part: feature:4348193-4348338:-1:exon
so has part: feature:4347603-4347822:-1:exon
so has part: feature:4346802-4347172:-1:exon

XP_006058760.1
type: Protein
SIO_000068: ncbiprotein

position:4346802:-1
position: 4346802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4348966:-1
position: 4348966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4348600-4348966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4348193-4348338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4347603-4347822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4346802-4347172:-1:exon

ERGIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: ERGIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4401580..4516915
location: region:4401580-4516915:1
so has part: feature:4401580-4516915:1:exon
subclass of: SO_0000010

102411163
type: Gene
SIO_000068: ncbigene

position:4401580:1
position: 4401580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4516915:1
position: 4516915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4401580-4516915:1:exon

ERGIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: ERGIC1
product: endoplasmic reticulum-golgi intermediate compartment 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058699.4
SIO_010081: ERGIC1
subclass of: SO_0000673
so part of: ERGIC1
location: join(4401580..4401962,4455311..4455372,4462230..4462302,4472654..4472748,4476774..4476898,4488844..4488948,4493859..4493919,4498620..4498720,4501418..4501540,4515038..4516915)
location: region:4401580-4516915:1
so has part: feature:4401580-4401962:1:exon
so has part: feature:4455311-4455372:1:exon
so has part: feature:4462230-4462302:1:exon
so has part: feature:4472654-4472748:1:exon
so has part: feature:4476774-4476898:1:exon
so has part: feature:4488844-4488948:1:exon
so has part: feature:4493859-4493919:1:exon
so has part: feature:4498620-4498720:1:exon
so has part: feature:4501418-4501540:1:exon
so has part: feature:4515038-4516915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4401580-4401962:1:exon

position:4401962:1
position: 4401962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4455311-4455372:1:exon

position:4455311:1
position: 4455311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4455372:1
position: 4455372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4462230-4462302:1:exon

position:4462230:1
position: 4462230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4462302:1
position: 4462302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4472654-4472748:1:exon

position:4472654:1
position: 4472654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4472748:1
position: 4472748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4476774-4476898:1:exon

position:4476774:1
position: 4476774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4476898:1
position: 4476898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4488844-4488948:1:exon

position:4488844:1
position: 4488844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4488948:1
position: 4488948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4493859-4493919:1:exon

position:4493859:1
position: 4493859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493919:1
position: 4493919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4498620-4498720:1:exon

position:4498620:1
position: 4498620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4498720:1
position: 4498720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4501418-4501540:1:exon

position:4501418:1
position: 4501418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4501540:1
position: 4501540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4515038-4516915:1:exon

position:4515038:1
position: 4515038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERGIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: ERGIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 1
translation: MNNCIFGCSLPLQASSPTARPAKARPSVPAPSPVPQPLGPFNGAAEGAAGGGGGAQCAEPSVTSRRLEAAATVGGGGRPAGAGRPEAALAAGWDPRGAAAHLACSAPIPGGGGDGTMPFDFRRFDIYRKVPKDLTQPTYTGAIISVCCCLFILFLFLSELTGFITTEIVNELYVDDPDKDSGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMKIPLNNGVGCRFEGQFSINKVPGNFHVSTHSATAQPQNPDMTHVIHKLSFGDTLQVHNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQQYSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLGKMH
SIO_010081: ERGIC1
subclass of: SO_0000673
so part of: ERGIC1
location: join(4401595..4401962,4455311..4455372,4462230..4462302,4472654..4472748,4476774..4476898,4488844..4488948,4493859..4493919,4498620..4498720,4501418..4501540,4515038..4515145)
location: region:4401595-4515145:1
so has part: feature:4401595-4401962:1:exon
so has part: feature:4455311-4455372:1:exon
so has part: feature:4462230-4462302:1:exon
so has part: feature:4472654-4472748:1:exon
so has part: feature:4476774-4476898:1:exon
so has part: feature:4488844-4488948:1:exon
so has part: feature:4493859-4493919:1:exon
so has part: feature:4498620-4498720:1:exon
so has part: feature:4501418-4501540:1:exon
so has part: feature:4515038-4515145:1:exon

XP_006058761.2
type: Protein
SIO_000068: ncbiprotein

position:4401595:1
position: 4401595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4515145:1
position: 4515145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4401595-4401962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4455311-4455372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4462230-4462302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4472654-4472748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4476774-4476898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4488844-4488948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4493859-4493919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4498620-4498720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4501418-4501540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4515038-4515145:1:exon

LOC112577690
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112577690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4505089..4507767
location: region:4505089-4507767:1
so has part: feature:4505089-4507767:1:exon
subclass of: SO_0000010

112577690
type: Gene
SIO_000068: ncbigene

position:4505089:1
position: 4505089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4507767:1
position: 4507767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4505089-4507767:1:exon

LOC112577690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: LOC112577690
product: protein FAM104A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932441.2
SIO_010081: LOC112577690
subclass of: SO_0000673
so part of: LOC112577690
location: 4505089..4507767
location: region:4505089-4507767:1
so has part: feature:4505089-4507767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4505089-4507767:1:exon

LOC112577690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: LOC112577690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM104A
translation: MSERLRPRKRRRNGSEEDHHLPPQTKRSSRNPVFHDSWDTESLGSDSGGSSSSSISSPDRASGPESSLHHLAAGPGPHTPQPAPEPSALCQGPYFHINQTLKEAHFHSLQHRGRPPS
SIO_010081: LOC112577690
subclass of: SO_0000673
so part of: LOC112577690
location: 4507027..4507380
location: region:4507027-4507380:1
so has part: feature:4507027-4507380:1:exon

XP_044788376.2
type: Protein
SIO_000068: ncbiprotein

position:4507027:1
position: 4507027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4507380:1
position: 4507380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4507027-4507380:1:exon

RPL26L1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: RPL26L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4526127..4532895
location: region:4526127-4532895:1
so has part: feature:4526127-4532895:1:exon
subclass of: SO_0000010

102411500
type: Gene
SIO_000068: ncbigene

position:4526127:1
position: 4526127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4532895:1
position: 4532895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4526127-4532895:1:exon

RPL26L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: RPL26L1
product: ribosomal protein L26 like 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058700.4
SIO_010081: RPL26L1
subclass of: SO_0000673
so part of: RPL26L1
location: join(4526127..4526281,4526680..4526856,4531721..4531861,4532573..4532895)
location: region:4526127-4532895:1
so has part: feature:4526127-4526281:1:exon
so has part: feature:4526680-4526856:1:exon
so has part: feature:4531721-4531861:1:exon
so has part: feature:4532573-4532895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4526127-4526281:1:exon

position:4526281:1
position: 4526281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4526680-4526856:1:exon

position:4526680:1
position: 4526680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4526856:1
position: 4526856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4531721-4531861:1:exon

position:4531721:1
position: 4531721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4531861:1
position: 4531861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4532573-4532895:1:exon

position:4532573:1
position: 4532573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL26L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: RPL26L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L26-like 1
translation: MGMEHCFLSALAQQGSLTSVHTRAPSELGGPSTNTMKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEELIEKMQE
SIO_010081: RPL26L1
subclass of: SO_0000673
so part of: RPL26L1
location: join(4526186..4526281,4526680..4526856,4531721..4531861,4532573..4532701)
location: region:4526186-4532701:1
so has part: feature:4526186-4526281:1:exon
so has part: feature:4526680-4526856:1:exon
so has part: feature:4531721-4531861:1:exon
so has part: feature:4532573-4532701:1:exon

XP_006058762.1
type: Protein
SIO_000068: ncbiprotein

position:4526186:1
position: 4526186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4532701:1
position: 4532701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4526186-4526281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4526680-4526856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4531721-4531861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4532573-4532701:1:exon

LOC123330547
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330547
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4538866..4541314)
location: region:4538866-4541314:-1
so has part: feature:4538866-4541314:-1:exon
subclass of: SO_0000011

123330547
type: Gene
SIO_000068: ncbigene

position:4538866:-1
position: 4538866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4541314:-1
position: 4541314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4538866-4541314:-1:exon

LOC123330547
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330547
product: uncharacterized LOC123330547, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_006546548.2
SIO_010081: LOC123330547
subclass of: SO_0000673
so part of: LOC123330547
location: complement(join(4538866..4539219,4540378..4540465,4540803..4541053,4541177..4541314))
location: region:4538866-4541314:-1
so has part: feature:4541177-4541314:-1:exon
so has part: feature:4540803-4541053:-1:exon
so has part: feature:4540378-4540465:-1:exon
so has part: feature:4538866-4539219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4541177-4541314:-1:exon

position:4541177:-1
position: 4541177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4540803-4541053:-1:exon

position:4540803:-1
position: 4540803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4541053:-1
position: 4541053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4540378-4540465:-1:exon

position:4540378:-1
position: 4540378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4540465:-1
position: 4540465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4538866-4539219:-1:exon

position:4539219:-1
position: 4539219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123330547
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330547
product: uncharacterized LOC123330547, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_006546547.2
SIO_010081: LOC123330547
subclass of: SO_0000673
so part of: LOC123330547
location: complement(join(4538866..4539219,4540378..4540465,4540803..4541285))
location: region:4538866-4541285:-1
so has part: feature:4540803-4541285:-1:exon
so has part: feature:4540378-4540465:-1:exon
so has part: feature:4538866-4539219:-1:exon

position:4541285:-1
position: 4541285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4540803-4541285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4540378-4540465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4538866-4539219:-1:exon

ATP6V0E1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: ATP6V0E1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4541413..4572860
location: region:4541413-4572860:1
so has part: feature:4541413-4572860:1:exon
subclass of: SO_0000010

102411839
type: Gene
SIO_000068: ncbigene

position:4541413:1
position: 4541413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4572860:1
position: 4572860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4541413-4572860:1:exon

ATP6V0E1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: ATP6V0E1
product: ATPase H+ transporting V0 subunit e1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058701.4
SIO_010081: ATP6V0E1
subclass of: SO_0000673
so part of: ATP6V0E1
location: join(4541413..4541602,4548278..4548325,4564922..4565051,4572369..4572860)
location: region:4541413-4572860:1
so has part: feature:4541413-4541602:1:exon
so has part: feature:4548278-4548325:1:exon
so has part: feature:4564922-4565051:1:exon
so has part: feature:4572369-4572860:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4541413-4541602:1:exon

position:4541602:1
position: 4541602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4548278-4548325:1:exon

position:4548278:1
position: 4548278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4548325:1
position: 4548325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4564922-4565051:1:exon

position:4564922:1
position: 4564922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4565051:1
position: 4565051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4572369-4572860:1:exon

position:4572369:1
position: 4572369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP6V0E1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: ATP6V0E1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit e 1
translation: MAYTGLTVPLIVMSVFWGIVGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHWP
SIO_010081: ATP6V0E1
subclass of: SO_0000673
so part of: ATP6V0E1
location: join(4541499..4541602,4548278..4548325,4564922..4565015)
location: region:4541499-4565015:1
so has part: feature:4541499-4541602:1:exon
so has part: feature:4548278-4548325:1:exon
so has part: feature:4564922-4565015:1:exon

XP_006058763.1
type: Protein
SIO_000068: ncbiprotein

position:4541499:1
position: 4541499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4565015:1
position: 4565015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4541499-4541602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4548278-4548325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4564922-4565015:1:exon

CREBRF
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4586808..4651235
location: region:4586808-4651235:1
so has part: feature:4586808-4651235:1:exon
subclass of: SO_0000010

102412162
type: Gene
SIO_000068: ncbigene

position:4586808:1
position: 4586808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4651235:1
position: 4651235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4586808-4651235:1:exon

CREBRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: CREBRF
product: CREB3 regulatory factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_025270850.2
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4586808..4586953,4610439..4610634,4612909..4613034,4614477..4615563,4621822..4622016,4623947..4624136,4625566..4625639,4634115..4634237,4641458..4641593,4651217..4651235)
location: region:4586808-4651235:1
so has part: feature:4586808-4586953:1:exon
so has part: feature:4610439-4610634:1:exon
so has part: feature:4612909-4613034:1:exon
so has part: feature:4614477-4615563:1:exon
so has part: feature:4621822-4622016:1:exon
so has part: feature:4623947-4624136:1:exon
so has part: feature:4625566-4625639:1:exon
so has part: feature:4634115-4634237:1:exon
so has part: feature:4641458-4641593:1:exon
so has part: feature:4651217-4651235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4586808-4586953:1:exon

position:4586953:1
position: 4586953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4610439-4610634:1:exon

position:4610439:1
position: 4610439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4610634:1
position: 4610634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4612909-4613034:1:exon

position:4612909:1
position: 4612909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4613034:1
position: 4613034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4614477-4615563:1:exon

position:4614477:1
position: 4614477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4615563:1
position: 4615563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4621822-4622016:1:exon

position:4621822:1
position: 4621822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4622016:1
position: 4622016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4623947-4624136:1:exon

position:4623947:1
position: 4623947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4624136:1
position: 4624136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4625566-4625639:1:exon

position:4625566:1
position: 4625566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4625639:1
position: 4625639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4634115-4634237:1:exon

position:4634115:1
position: 4634115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4634237:1
position: 4634237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4641458-4641593:1:exon

position:4641458:1
position: 4641458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4641593:1
position: 4641593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4651217-4651235:1:exon

position:4651217:1
position: 4651217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CREBRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: CREBRF
product: CREB3 regulatory factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058702.4
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4586808..4586953,4610439..4610634,4612909..4613034,4614477..4615563,4621822..4622016,4623947..4624136,4625566..4625639,4634115..4634237,4641458..4647115)
location: region:4586808-4647115:1
so has part: feature:4586808-4586953:1:exon
so has part: feature:4610439-4610634:1:exon
so has part: feature:4612909-4613034:1:exon
so has part: feature:4614477-4615563:1:exon
so has part: feature:4621822-4622016:1:exon
so has part: feature:4623947-4624136:1:exon
so has part: feature:4625566-4625639:1:exon
so has part: feature:4634115-4634237:1:exon
so has part: feature:4641458-4647115:1:exon

position:4647115:1
position: 4647115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4586808-4586953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4610439-4610634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4612909-4613034:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4614477-4615563:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4621822-4622016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4623947-4624136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4625566-4625639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4634115-4634237:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4641458-4647115:1:exon

CREBRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: CREBRF
product: CREB3 regulatory factor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058703.4
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4587801..4588500,4610439..4610634,4612909..4613034,4614477..4615563,4621822..4622016,4623947..4624136,4625566..4625639,4634115..4634237,4641458..4647115)
location: region:4587801-4647115:1
so has part: feature:4587801-4588500:1:exon
so has part: feature:4610439-4610634:1:exon
so has part: feature:4612909-4613034:1:exon
so has part: feature:4614477-4615563:1:exon
so has part: feature:4621822-4622016:1:exon
so has part: feature:4623947-4624136:1:exon
so has part: feature:4625566-4625639:1:exon
so has part: feature:4634115-4634237:1:exon
so has part: feature:4641458-4647115:1:exon

position:4587801:1
position: 4587801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4587801-4588500:1:exon

position:4588500:1
position: 4588500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4610439-4610634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4612909-4613034:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4614477-4615563:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4621822-4622016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4623947-4624136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4625566-4625639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4634115-4634237:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4641458-4647115:1:exon

CREBRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor
translation: MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYELDREMNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGTLTSNWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPLASSFPGKKITSRAAAPVCSSKTLQAEVPLSDCVQKASKPTSSTQIMVKTNMYHNEKVNFHVECKDYVKKAKVKINPVQQSRPLSSQVHADAAKENTCYCGAVAKRAEKKGTEPLQGHAAPALPFKEAQELLLSPLPQEGPGSVAAGESSSLSASTSVSDSSQKKEEHNYSLFVSDNLGEQPTKCSPEEDEEDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTSVTSRKRGKRRYFWEYSEQLTPSQQERMLRPSEWNRETLPSNMYQKNGLHHGKYAVKKSRRTDVEDLTPNPKKLLQIGNELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPREERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPTSKV
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4610626..4610634,4612909..4613034,4614477..4615563,4621822..4622016,4623947..4624136,4625566..4625639,4634115..4634237,4641458..4641573)
location: region:4610626-4641573:1
so has part: feature:4610626-4610634:1:exon
so has part: feature:4612909-4613034:1:exon
so has part: feature:4614477-4615563:1:exon
so has part: feature:4621822-4622016:1:exon
so has part: feature:4623947-4624136:1:exon
so has part: feature:4625566-4625639:1:exon
so has part: feature:4634115-4634237:1:exon
so has part: feature:4641458-4641573:1:exon

XP_025126635.1
type: Protein
SIO_000068: ncbiprotein

position:4610626:1
position: 4610626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4641573:1
position: 4641573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4610626-4610634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4612909-4613034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4614477-4615563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4621822-4622016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4623947-4624136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4625566-4625639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4634115-4634237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4641458-4641573:1:exon

CREBRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor
translation: MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYELDREMNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGTLTSNWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPLASSFPGKKITSRAAAPVCSSKTLQAEVPLSDCVQKASKPTSSTQIMVKTNMYHNEKVNFHVECKDYVKKAKVKINPVQQSRPLSSQVHADAAKENTCYCGAVAKRAEKKGTEPLQGHAAPALPFKEAQELLLSPLPQEGPGSVAAGESSSLSASTSVSDSSQKKEEHNYSLFVSDNLGEQPTKCSPEEDEEDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTSVTSRKRGKRRYFWEYSEQLTPSQQERMLRPSEWNRETLPSNMYQKNGLHHGKYAVKKSRRTDVEDLTPNPKKLLQIGNELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPREERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPTSKV
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4610626..4610634,4612909..4613034,4614477..4615563,4621822..4622016,4623947..4624136,4625566..4625639,4634115..4634237,4641458..4641573)
location: region:4610626-4641573:1
so has part: feature:4610626-4610634:1:exon
so has part: feature:4612909-4613034:1:exon
so has part: feature:4614477-4615563:1:exon
so has part: feature:4621822-4622016:1:exon
so has part: feature:4623947-4624136:1:exon
so has part: feature:4625566-4625639:1:exon
so has part: feature:4634115-4634237:1:exon
so has part: feature:4641458-4641573:1:exon

XP_006058764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4610626-4610634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4612909-4613034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4614477-4615563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4621822-4622016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4623947-4624136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4625566-4625639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4634115-4634237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4641458-4641573:1:exon

CREBRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor
translation: MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYELDREMNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGTLTSNWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPLASSFPGKKITSRAAAPVCSSKTLQAEVPLSDCVQKASKPTSSTQIMVKTNMYHNEKVNFHVECKDYVKKAKVKINPVQQSRPLSSQVHADAAKENTCYCGAVAKRAEKKGTEPLQGHAAPALPFKEAQELLLSPLPQEGPGSVAAGESSSLSASTSVSDSSQKKEEHNYSLFVSDNLGEQPTKCSPEEDEEDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTSVTSRKRGKRRYFWEYSEQLTPSQQERMLRPSEWNRETLPSNMYQKNGLHHGKYAVKKSRRTDVEDLTPNPKKLLQIGNELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPREERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPTSKV
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4610626..4610634,4612909..4613034,4614477..4615563,4621822..4622016,4623947..4624136,4625566..4625639,4634115..4634237,4641458..4641573)
location: region:4610626-4641573:1
so has part: feature:4610626-4610634:1:exon
so has part: feature:4612909-4613034:1:exon
so has part: feature:4614477-4615563:1:exon
so has part: feature:4621822-4622016:1:exon
so has part: feature:4623947-4624136:1:exon
so has part: feature:4625566-4625639:1:exon
so has part: feature:4634115-4634237:1:exon
so has part: feature:4641458-4641573:1:exon

XP_006058765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4610626-4610634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4612909-4613034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4614477-4615563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4621822-4622016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4623947-4624136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4625566-4625639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4634115-4634237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4641458-4641573:1:exon

BNIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: BNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4651289..4664211
location: region:4651289-4664211:1
so has part: feature:4651289-4664211:1:exon
subclass of: SO_0000010

102412696
type: Gene
SIO_000068: ncbigene

position:4651289:1
position: 4651289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4664211:1
position: 4664211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4651289-4664211:1:exon

BNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: BNIP1
product: BCL2 interacting protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058704.3
SIO_010081: BNIP1
subclass of: SO_0000673
so part of: BNIP1
location: join(4651289..4651491,4653663..4653755,4654998..4655089,4658516..4658617,4660262..4660380,4663625..4664211)
location: region:4651289-4664211:1
so has part: feature:4651289-4651491:1:exon
so has part: feature:4653663-4653755:1:exon
so has part: feature:4654998-4655089:1:exon
so has part: feature:4658516-4658617:1:exon
so has part: feature:4660262-4660380:1:exon
so has part: feature:4663625-4664211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4651289-4651491:1:exon

position:4651491:1
position: 4651491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4653663-4653755:1:exon

position:4653663:1
position: 4653663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4653755:1
position: 4653755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4654998-4655089:1:exon

position:4654998:1
position: 4654998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4655089:1
position: 4655089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4658516-4658617:1:exon

position:4658516:1
position: 4658516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4658617:1
position: 4658617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4660262-4660380:1:exon

position:4660262:1
position: 4660262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4660380:1
position: 4660380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4663625-4664211:1:exon

position:4663625:1
position: 4663625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: BNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein SEC20
translation: MAAAQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQELEQSAKEQDKESEKQVLLQEVENHKKQMLSNQTSWRKANLTCKIAIDNLEKAELLQGGDLFRQRKTAKESLAQTSSDITESLMGISRMMSQQVQQSEEAMQTLVNSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFL
SIO_010081: BNIP1
subclass of: SO_0000673
so part of: BNIP1
location: join(4651408..4651491,4653663..4653755,4654998..4655089,4658516..4658617,4660262..4660380,4663625..4663821)
location: region:4651408-4663821:1
so has part: feature:4651408-4651491:1:exon
so has part: feature:4653663-4653755:1:exon
so has part: feature:4654998-4655089:1:exon
so has part: feature:4658516-4658617:1:exon
so has part: feature:4660262-4660380:1:exon
so has part: feature:4663625-4663821:1:exon

XP_006058766.1
type: Protein
SIO_000068: ncbiprotein

position:4651408:1
position: 4651408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4663821:1
position: 4663821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4651408-4651491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4653663-4653755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4654998-4655089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4658516-4658617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4660262-4660380:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4663625-4663821:1:exon

TRNAC-ACA
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: TRNAC-ACA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4672217..4672288
location: region:4672217-4672288:1
so has part: feature:4672217-4672288:1:exon
subclass of: SO_0000663

123330674
type: Gene
SIO_000068: ncbigene

position:4672217:1
position: 4672217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4672288:1
position: 4672288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4672217-4672288:1:exon

TRNAC-ACA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 89462
gene: TRNAC-ACA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon ACA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4672250..4672252,aa:Cys,seq:aca)
SIO_010081: TRNAC-ACA
subclass of: SO_0000673
so part of: TRNAC-ACA
location: 4672217..4672288
location: region:4672217-4672288:1
so has part: feature:4672217-4672288:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4672217-4672288:1:exon

NKX2-5
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: NKX2-5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4723954..4727373)
location: region:4723954-4727373:-1
so has part: feature:4723954-4727373:-1:exon
subclass of: SO_0000010

102413589
type: Gene
SIO_000068: ncbigene

position:4723954:-1
position: 4723954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4727373:-1
position: 4727373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4723954-4727373:-1:exon

NKX2-5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: NKX2-5
product: NK2 homeobox 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058706.4
SIO_010081: NKX2-5
subclass of: SO_0000673
so part of: NKX2-5
location: complement(join(4723954..4725067,4726593..4727373))
location: region:4723954-4727373:-1
so has part: feature:4726593-4727373:-1:exon
so has part: feature:4723954-4725067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4726593-4727373:-1:exon

position:4726593:-1
position: 4726593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4723954-4725067:-1:exon

position:4725067:-1
position: 4725067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NKX2-5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: NKX2-5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-2.5
translation: MFPSPALTPTPFSVKDILNLEQQQRSLAAGELSARLEATLAPASCMLAAFKPEAYAGPEAAAPGFPELRAELGPAPSPAKCAPAFSAAPAFYPRAYGDPDPAKDHRADKKELCALQKAVELEKPESDSAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPARRIAVPVLVRDGKPCLGDSAPYAPAYGVGLNAYGYNAYPAYPGYGGAACSPGYSCTAAYPAGPPPTQTATATANNNFVNFGVGDLNAVQSPGIPQGNSGVSTLHGIRAW
SIO_010081: NKX2-5
subclass of: SO_0000673
so part of: NKX2-5
location: complement(join(4724427..4725067,4726593..4726923))
location: region:4724427-4726923:-1
so has part: feature:4726593-4726923:-1:exon
so has part: feature:4724427-4725067:-1:exon

XP_006058768.3
type: Protein
SIO_000068: ncbiprotein

position:4724427:-1
position: 4724427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4726923:-1
position: 4726923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4726593-4726923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4724427-4725067:-1:exon

LOC123330592
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4789352..4796968)
location: region:4789352-4796968:-1
so has part: feature:4789352-4796968:-1:exon
subclass of: SO_0000011

123330592
type: Gene
SIO_000068: ncbigene

position:4789352:-1
position: 4789352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4796968:-1
position: 4796968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4789352-4796968:-1:exon

LOC123330592
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330592
product: uncharacterized LOC123330592
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_006546614.2
SIO_010081: LOC123330592
subclass of: SO_0000673
so part of: LOC123330592
location: complement(join(4789352..4790595,4792491..4792553,4795981..4796968))
location: region:4789352-4796968:-1
so has part: feature:4795981-4796968:-1:exon
so has part: feature:4792491-4792553:-1:exon
so has part: feature:4789352-4790595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4795981-4796968:-1:exon

position:4795981:-1
position: 4795981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4792491-4792553:-1:exon

position:4792491:-1
position: 4792491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4792553:-1
position: 4792553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4789352-4790595:-1:exon

position:4790595:-1
position: 4790595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STC2
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: STC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4811027..4824859)
location: region:4811027-4824859:-1
so has part: feature:4811027-4824859:-1:exon
subclass of: SO_0000010

102413908
type: Gene
SIO_000068: ncbigene

position:4811027:-1
position: 4811027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4824859:-1
position: 4824859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4811027-4824859:-1:exon

STC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: STC2
product: stanniocalcin 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058707.4
SIO_010081: STC2
subclass of: SO_0000673
so part of: STC2
location: complement(join(4811027..4814468,4819665..4819876,4822308..4822450,4824486..4824859))
location: region:4811027-4824859:-1
so has part: feature:4824486-4824859:-1:exon
so has part: feature:4822308-4822450:-1:exon
so has part: feature:4819665-4819876:-1:exon
so has part: feature:4811027-4814468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4824486-4824859:-1:exon

position:4824486:-1
position: 4824486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4822308-4822450:-1:exon

position:4822308:-1
position: 4822308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4822450:-1
position: 4822450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4819665-4819876:-1:exon

position:4819665:-1
position: 4819665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4819876:-1
position: 4819876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4811027-4814468:-1:exon

position:4814468:-1
position: 4814468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: STC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stanniocalcin-2
translation: MCAERLGQFVTLALVLVTFDPARGTDATNTPEGPQDRSSQQKGRLSLQNTAEIQHCLVNAGDVGCGVFECFENNSCEIRGLHGICMTFLHNAGKFDAQGKSFIKDALKCKAHALRHRFSCISRKCPAIKEMVFQLQRECYLKHDLCSAAQENIRVMVEMIHFKDLLLHEPYVDLVNLLLTCGEEVKEAITHSVQAQCEQSWGSLCSILSFCTSAIQRPPTAPPEHQLQVDRAKLSRGHPAEMGHHLAEPSSRETGRGAKGERGSKSHPNAHARGRAAGPGAQGTSGSSEWEDEQSEYSDIRR
SIO_010081: STC2
subclass of: SO_0000673
so part of: STC2
location: complement(join(4814066..4814468,4819665..4819876,4822308..4822450,4824486..4824636))
location: region:4814066-4824636:-1
so has part: feature:4824486-4824636:-1:exon
so has part: feature:4822308-4822450:-1:exon
so has part: feature:4819665-4819876:-1:exon
so has part: feature:4814066-4814468:-1:exon

XP_006058769.1
type: Protein
SIO_000068: ncbiprotein

position:4814066:-1
position: 4814066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4824636:-1
position: 4824636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4824486-4824636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4822308-4822450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4819665-4819876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4814066-4814468:-1:exon

LOC123330653
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330653
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4838389..4843101
location: region:4838389-4843101:1
so has part: feature:4838389-4843101:1:exon
subclass of: SO_0000011

123330653
type: Gene
SIO_000068: ncbigene

position:4838389:1
position: 4838389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4843101:1
position: 4843101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4838389-4843101:1:exon

LOC123330653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330653
product: uncharacterized LOC123330653
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_006546712.2
SIO_010081: LOC123330653
subclass of: SO_0000673
so part of: LOC123330653
location: join(4838389..4838763,4842721..4842890,4843041..4843101)
location: region:4838389-4843101:1
so has part: feature:4838389-4838763:1:exon
so has part: feature:4842721-4842890:1:exon
so has part: feature:4843041-4843101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4838389-4838763:1:exon

position:4838763:1
position: 4838763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4842721-4842890:1:exon

position:4842721:1
position: 4842721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4842890:1
position: 4842890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4843041-4843101:1:exon

position:4843041:1
position: 4843041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123330654
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4843189..4843843
location: region:4843189-4843843:1
so has part: feature:4843189-4843843:1:exon
subclass of: SO_0000011

123330654
type: Gene
SIO_000068: ncbigene

position:4843189:1
position: 4843189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4843843:1
position: 4843843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4843189-4843843:1:exon

LOC123330654
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330654
product: uncharacterized LOC123330654
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546713.2
SIO_010081: LOC123330654
subclass of: SO_0000673
so part of: LOC123330654
location: join(4843189..4843461,4843557..4843843)
location: region:4843189-4843843:1
so has part: feature:4843189-4843461:1:exon
so has part: feature:4843557-4843843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4843189-4843461:1:exon

position:4843461:1
position: 4843461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4843557-4843843:1:exon

position:4843557:1
position: 4843557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123330651
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC123330651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4851720..4876072
location: region:4851720-4876072:1
so has part: feature:4851720-4876072:1:exon
subclass of: SO_0000011

123330651
type: Gene
SIO_000068: ncbigene

position:4851720:1
position: 4851720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4876072:1
position: 4876072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4851720-4876072:1:exon

LOC123330651
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330651
product: uncharacterized LOC123330651, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006546710.2
SIO_010081: LOC123330651
subclass of: SO_0000673
so part of: LOC123330651
location: join(4851720..4852011,4863152..4863407,4875712..4876072)
location: region:4851720-4876072:1
so has part: feature:4851720-4852011:1:exon
so has part: feature:4863152-4863407:1:exon
so has part: feature:4875712-4876072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4851720-4852011:1:exon

position:4852011:1
position: 4852011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4863152-4863407:1:exon

position:4863152:1
position: 4863152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4863407:1
position: 4863407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4875712-4876072:1:exon

position:4875712:1
position: 4875712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123330651
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC123330651
product: uncharacterized LOC123330651, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_006546709.2
SIO_010081: LOC123330651
subclass of: SO_0000673
so part of: LOC123330651
location: join(4851723..4852011,4863152..4863407,4869909..4870571)
location: region:4851723-4870571:1
so has part: feature:4851723-4852011:1:exon
so has part: feature:4863152-4863407:1:exon
so has part: feature:4869909-4870571:1:exon

position:4851723:1
position: 4851723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4870571:1
position: 4870571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4851723-4852011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4863152-4863407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4869909-4870571:1:exon

position:4869909:1
position: 4869909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112580709
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112580709
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5050256..5050426)
location: region:5050256-5050426:-1
so has part: feature:5050256-5050426:-1:exon

112580709
type: Gene
SIO_000068: ncbigene

position:5050256:-1
position: 5050256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5050426:-1
position: 5050426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5050256-5050426:-1:exon

LOC112580709
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC112580709
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC112580709
subclass of: SO_0000673
so part of: LOC112580709
location: complement(5050256..5050426)
location: region:5050256-5050426:-1
so has part: feature:5050256-5050426:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5050256-5050426:-1:exon

BOD1
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: BOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5123643..5135676)
location: region:5123643-5135676:-1
so has part: feature:5123643-5135676:-1:exon
subclass of: SO_0000010

102415460
type: Gene
SIO_000068: ncbigene

position:5123643:-1
position: 5123643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5135676:-1
position: 5135676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5123643-5135676:-1:exon

BOD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: BOD1
product: biorientation of chromosomes in cell division 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006058709.4
SIO_010081: BOD1
subclass of: SO_0000673
so part of: BOD1
location: complement(join(5123643..5124418,5125380..5125576,5131208..5131332,5135173..5135676))
location: region:5123643-5135676:-1
so has part: feature:5135173-5135676:-1:exon
so has part: feature:5131208-5131332:-1:exon
so has part: feature:5125380-5125576:-1:exon
so has part: feature:5123643-5124418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5135173-5135676:-1:exon

position:5135173:-1
position: 5135173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5131208-5131332:-1:exon

position:5131208:-1
position: 5131208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5131332:-1
position: 5131332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5125380-5125576:-1:exon

position:5125380:-1
position: 5125380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5125576:-1
position: 5125576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5123643-5124418:-1:exon

position:5124418:-1
position: 5124418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BOD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: BOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: biorientation of chromosomes in cell division protein 1
translation: MQRSAVTSSGERPGRGGRFPPPPAAALLPERLLRPLSTPPPPLPPTSPPPPPPPSPFRAPPPPLHDLGPLFLRGSLTRAPWRAGRAAMADGGGGGGTGAVGGGGAGPASAGTAAGGGGAGGSGGPINPASLPPGDPQLIALIVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQKKEAVPAPPPEPESQDPAAPSQDAS
SIO_010081: BOD1
subclass of: SO_0000673
so part of: BOD1
location: complement(join(5125381..5125576,5131208..5131332,5135173..5135670))
location: region:5125381-5135670:-1
so has part: feature:5135173-5135670:-1:exon
so has part: feature:5131208-5131332:-1:exon
so has part: feature:5125381-5125576:-1:exon

XP_006058771.4
type: Protein
SIO_000068: ncbiprotein

position:5125381:-1
position: 5125381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5135670:-1
position: 5135670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5135173-5135670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5131208-5131332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5125381-5125576:-1:exon

LOC102414453
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC102414453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5135782..5149025
location: region:5135782-5149025:1
so has part: feature:5135782-5149025:1:exon
subclass of: SO_0000011

102414453
type: Gene
SIO_000068: ncbigene

position:5135782:1
position: 5135782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5149025:1
position: 5149025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5135782-5149025:1:exon

LOC102414453
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC102414453
product: uncharacterized LOC102414453
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_327581.3
SIO_010081: LOC102414453
subclass of: SO_0000673
so part of: LOC102414453
location: join(5135782..5135945,5136587..5136733,5148591..5149025)
location: region:5135782-5149025:1
so has part: feature:5135782-5135945:1:exon
so has part: feature:5136587-5136733:1:exon
so has part: feature:5148591-5149025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5135782-5135945:1:exon

position:5135945:1
position: 5135945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5136587-5136733:1:exon

position:5136587:1
position: 5136587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5136733:1
position: 5136733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5148591-5149025:1:exon

position:5148591:1
position: 5148591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102414236
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC102414236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5163464..5183535
location: region:5163464-5183535:1
so has part: feature:5163464-5183535:1:exon
subclass of: SO_0000011

102414236
type: Gene
SIO_000068: ncbigene

position:5163464:1
position: 5163464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5183535:1
position: 5183535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5163464-5183535:1:exon

LOC102414236
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC102414236
product: uncharacterized LOC102414236
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_003105021.3
SIO_010081: LOC102414236
subclass of: SO_0000673
so part of: LOC102414236
location: join(5163464..5164360,5171770..5171904,5172035..5172225,5174361..5174418,5183299..5183535)
location: region:5163464-5183535:1
so has part: feature:5163464-5164360:1:exon
so has part: feature:5171770-5171904:1:exon
so has part: feature:5172035-5172225:1:exon
so has part: feature:5174361-5174418:1:exon
so has part: feature:5183299-5183535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5163464-5164360:1:exon

position:5164360:1
position: 5164360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5171770-5171904:1:exon

position:5171770:1
position: 5171770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5171904:1
position: 5171904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5172035-5172225:1:exon

position:5172035:1
position: 5172035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5172225:1
position: 5172225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5174361-5174418:1:exon

position:5174361:1
position: 5174361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5174418:1
position: 5174418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5183299-5183535:1:exon

position:5183299:1
position: 5183299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112580681
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC112580681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5294208..5298736
location: region:5294208-5298736:1
so has part: feature:5294208-5298736:1:exon
subclass of: SO_0000011

112580681
type: Gene
SIO_000068: ncbigene

position:5294208:1
position: 5294208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5298736:1
position: 5298736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5294208-5298736:1:exon

LOC112580681
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89462
nc RNA class: lncRNA
gene: LOC112580681
product: uncharacterized LOC112580681
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_003105024.3
SIO_010081: LOC112580681
subclass of: SO_0000673
so part of: LOC112580681
location: join(5294208..5294705,5295117..5295255,5296060..5298736)
location: region:5294208-5298736:1
so has part: feature:5294208-5294705:1:exon
so has part: feature:5295117-5295255:1:exon
so has part: feature:5296060-5298736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5294208-5294705:1:exon

position:5294705:1
position: 5294705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5295117-5295255:1:exon

position:5295117:1
position: 5295117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5295255:1
position: 5295255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5296060-5298736:1:exon

position:5296060:1
position: 5296060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102402254
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: LOC102402254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5307344..5309252
location: region:5307344-5309252:1
so has part: feature:5307344-5309252:1:exon

102402254
type: Gene
SIO_000068: ncbigene

position:5307344:1
position: 5307344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5309252:1
position: 5309252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5307344-5309252:1:exon

LOC102402254
type: Exon
subclass of: SO_0000147
RO_0002162: 89462
gene: LOC102402254
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102402254
subclass of: SO_0000673
so part of: LOC102402254
location: 5307344..5309252
location: region:5307344-5309252:1
so has part: feature:5307344-5309252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5307344-5309252:1:exon

CPEB4
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5409713..5482800
location: region:5409713-5482800:1
so has part: feature:5409713-5482800:1:exon
subclass of: SO_0000010

102402567
type: Gene
SIO_000068: ncbigene

position:5409713:1
position: 5409713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5482800:1
position: 5482800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5409713-5482800:1:exon

CPEB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: CPEB4
product: cytoplasmic polyadenylation element binding protein 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006055388.4
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5409713..5412288,5433552..5433633,5453921..5453971,5465446..5465469,5467174..5467347,5472225..5472314,5472675..5472793,5474407..5474521,5475647..5475828,5478403..5482800)
location: region:5409713-5482800:1
so has part: feature:5409713-5412288:1:exon
so has part: feature:5433552-5433633:1:exon
so has part: feature:5453921-5453971:1:exon
so has part: feature:5465446-5465469:1:exon
so has part: feature:5467174-5467347:1:exon
so has part: feature:5472225-5472314:1:exon
so has part: feature:5472675-5472793:1:exon
so has part: feature:5474407-5474521:1:exon
so has part: feature:5475647-5475828:1:exon
so has part: feature:5478403-5482800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5409713-5412288:1:exon

position:5412288:1
position: 5412288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5433552-5433633:1:exon

position:5433552:1
position: 5433552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5433633:1
position: 5433633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5453921-5453971:1:exon

position:5453921:1
position: 5453921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5453971:1
position: 5453971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5465446-5465469:1:exon

position:5465446:1
position: 5465446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5465469:1
position: 5465469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5467174-5467347:1:exon

position:5467174:1
position: 5467174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5467347:1
position: 5467347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5472225-5472314:1:exon

position:5472225:1
position: 5472225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5472314:1
position: 5472314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5472675-5472793:1:exon

position:5472675:1
position: 5472675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5472793:1
position: 5472793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5474407-5474521:1:exon

position:5474407:1
position: 5474407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5474521:1
position: 5474521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5475647-5475828:1:exon

position:5475647:1
position: 5475647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5475828:1
position: 5475828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5478403-5482800:1:exon

position:5478403:1
position: 5478403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPEB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: CPEB4
product: cytoplasmic polyadenylation element binding protein 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006055390.4
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5409713..5412288,5433552..5433633,5467174..5467347,5472225..5472314,5472675..5472793,5474407..5474521,5475647..5475828,5478403..5482800)
location: region:5409713-5482800:1
so has part: feature:5409713-5412288:1:exon
so has part: feature:5433552-5433633:1:exon
so has part: feature:5467174-5467347:1:exon
so has part: feature:5472225-5472314:1:exon
so has part: feature:5472675-5472793:1:exon
so has part: feature:5474407-5474521:1:exon
so has part: feature:5475647-5475828:1:exon
so has part: feature:5478403-5482800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5409713-5412288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5433552-5433633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5467174-5467347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5472225-5472314:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5472675-5472793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5474407-5474521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5475647-5475828:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5478403-5482800:1:exon

CPEB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: CPEB4
product: cytoplasmic polyadenylation element binding protein 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_006055389.4
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5409714..5412288,5433552..5433633,5453921..5453971,5467174..5467347,5472225..5472314,5472675..5472793,5474407..5474521,5475647..5475828,5478403..5482800)
location: region:5409714-5482800:1
so has part: feature:5409714-5412288:1:exon
so has part: feature:5433552-5433633:1:exon
so has part: feature:5453921-5453971:1:exon
so has part: feature:5467174-5467347:1:exon
so has part: feature:5472225-5472314:1:exon
so has part: feature:5472675-5472793:1:exon
so has part: feature:5474407-5474521:1:exon
so has part: feature:5475647-5475828:1:exon
so has part: feature:5478403-5482800:1:exon

position:5409714:1
position: 5409714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5409714-5412288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5433552-5433633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5453921-5453971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5467174-5467347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5472225-5472314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5472675-5472793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5474407-5474521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5475647-5475828:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5478403-5482800:1:exon

CPEB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4 isoform X1
translation: MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQQQEPQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSNYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDSIKGRLNYSYPGSDSSLLINARTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFTHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5411164..5412288,5433552..5433633,5453921..5453971,5465446..5465469,5467174..5467347,5472225..5472314,5472675..5472793,5474407..5474521,5475647..5475828,5478403..5478630)
location: region:5411164-5478630:1
so has part: feature:5411164-5412288:1:exon
so has part: feature:5433552-5433633:1:exon
so has part: feature:5453921-5453971:1:exon
so has part: feature:5465446-5465469:1:exon
so has part: feature:5467174-5467347:1:exon
so has part: feature:5472225-5472314:1:exon
so has part: feature:5472675-5472793:1:exon
so has part: feature:5474407-5474521:1:exon
so has part: feature:5475647-5475828:1:exon
so has part: feature:5478403-5478630:1:exon

XP_006055450.1
type: Protein
SIO_000068: ncbiprotein

position:5411164:1
position: 5411164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5478630:1
position: 5478630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5411164-5412288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5433552-5433633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5453921-5453971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5465446-5465469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5467174-5467347:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5472225-5472314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5472675-5472793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5474407-5474521:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5475647-5475828:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5478403-5478630:1:exon

CPEB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4 isoform X2
translation: MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQQQEPQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSNYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDSIKGRLNYSYPGSDSSLLINGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFTHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5411164..5412288,5433552..5433633,5453921..5453971,5467174..5467347,5472225..5472314,5472675..5472793,5474407..5474521,5475647..5475828,5478403..5478630)
location: region:5411164-5478630:1
so has part: feature:5411164-5412288:1:exon
so has part: feature:5433552-5433633:1:exon
so has part: feature:5453921-5453971:1:exon
so has part: feature:5467174-5467347:1:exon
so has part: feature:5472225-5472314:1:exon
so has part: feature:5472675-5472793:1:exon
so has part: feature:5474407-5474521:1:exon
so has part: feature:5475647-5475828:1:exon
so has part: feature:5478403-5478630:1:exon

XP_006055451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5411164-5412288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5433552-5433633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5453921-5453971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5467174-5467347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5472225-5472314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5472675-5472793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5474407-5474521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5475647-5475828:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5478403-5478630:1:exon

CPEB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4 isoform X3
translation: MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQQQEPQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSNYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDSIKGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFTHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5411164..5412288,5433552..5433633,5467174..5467347,5472225..5472314,5472675..5472793,5474407..5474521,5475647..5475828,5478403..5478630)
location: region:5411164-5478630:1
so has part: feature:5411164-5412288:1:exon
so has part: feature:5433552-5433633:1:exon
so has part: feature:5467174-5467347:1:exon
so has part: feature:5472225-5472314:1:exon
so has part: feature:5472675-5472793:1:exon
so has part: feature:5474407-5474521:1:exon
so has part: feature:5475647-5475828:1:exon
so has part: feature:5478403-5478630:1:exon

XP_006055452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5411164-5412288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5433552-5433633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5467174-5467347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5472225-5472314:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5472675-5472793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5474407-5474521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5475647-5475828:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5478403-5478630:1:exon

C19H5orf47
type: Gene
subclass of: SO_0000704
RO_0002162: 89462
gene: C19H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5505875..5524566
location: region:5505875-5524566:1
so has part: feature:5505875-5524566:1:exon
subclass of: SO_0000010

102403324
type: Gene
SIO_000068: ncbigene

position:5505875:1
position: 5505875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5524566:1
position: 5524566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5505875-5524566:1:exon

C19H5orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf47
product: chromosome 19 C5orf47 homolog, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932588.2
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5505875..5506977,5516654..5516739,5520775..5520843,5524385..5524566)
location: region:5505875-5524566:1
so has part: feature:5505875-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5520775-5520843:1:exon
so has part: feature:5524385-5524566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5505875-5506977:1:exon

position:5506977:1
position: 5506977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

position:5516654:1
position: 5516654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5516739:1
position: 5516739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5520775-5520843:1:exon

position:5520775:1
position: 5520775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5520843:1
position: 5520843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5524385-5524566:1:exon

position:5524385:1
position: 5524385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C19H5orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf47
product: chromosome 19 C5orf47 homolog, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270852.3
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5505878..5506977,5516654..5516739,5520775..5520813,5524385..5524566)
location: region:5505878-5524566:1
so has part: feature:5505878-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5520775-5520813:1:exon
so has part: feature:5524385-5524566:1:exon

position:5505878:1
position: 5505878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5505878-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5520775-5520813:1:exon

position:5520813:1
position: 5520813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5524385-5524566:1:exon

C19H5orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf47
product: chromosome 19 C5orf47 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932585.1
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5506632..5506977,5516654..5516739,5518763..5518862,5524385..5524566)
location: region:5506632-5524566:1
so has part: feature:5506632-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5524385-5524566:1:exon

position:5506632:1
position: 5506632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506632-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

position:5518763:1
position: 5518763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5518862:1
position: 5518862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5524385-5524566:1:exon

C19H5orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf47
product: chromosome 19 C5orf47 homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932586.1
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5506696..5506977,5516654..5516739,5518763..5518862,5520775..5520843,5524385..5524566)
location: region:5506696-5524566:1
so has part: feature:5506696-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5520775-5520843:1:exon
so has part: feature:5524385-5524566:1:exon

position:5506696:1
position: 5506696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506696-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5520775-5520843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5524385-5524566:1:exon

C19H5orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf47
product: chromosome 19 C5orf47 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_025270851.2
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5506729..5506977,5516654..5516739,5518763..5518862,5520775..5520813,5524385..5524566)
location: region:5506729-5524566:1
so has part: feature:5506729-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5520775-5520813:1:exon
so has part: feature:5524385-5524566:1:exon

position:5506729:1
position: 5506729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506729-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5520775-5520813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5524385-5524566:1:exon

C19H5orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf47 homolog isoform X1
translation: MAAAGRELERDRARFVYVTRFGSHQCGGVLALGGRRAQGPRSAGLKHGHSQEKLRAAAPGSPGLTQKNLAKEFDFPIPLSETSKIMKKNKKVLVWNGVYKIISKMLEENEKYRLRLKCQQLSRESLTYFCICLPKKIMKSLKMEF
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5506791..5506977,5516654..5516739,5518763..5518862,5524385..5524449)
location: region:5506791-5524449:1
so has part: feature:5506791-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5524385-5524449:1:exon

XP_044788520.1
type: Protein
SIO_000068: ncbiprotein

position:5506791:1
position: 5506791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5524449:1
position: 5524449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506791-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5524385-5524449:1:exon

C19H5orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf47 homolog isoform X5
translation: MAAAGRELERDRARFVYVTRFGSHQCGGVLALGGRRAQGPRSAGLKHGHSQEKLRAAAPGSPGLTQKNLAKEFDFPIPLSETSKIMKKNKKIQKIQNESSCHLLV
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5506791..5506977,5516654..5516739,5520775..5520813,5524385..5524390)
location: region:5506791-5524390:1
so has part: feature:5506791-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5520775-5520813:1:exon
so has part: feature:5524385-5524390:1:exon

XP_025126637.1
type: Protein
SIO_000068: ncbiprotein

position:5524390:1
position: 5524390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506791-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5520775-5520813:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5524385-5524390:1:exon

C19H5orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf47 homolog isoform X4
translation: MAAAGRELERDRARFVYVTRFGSHQCGGVLALGGRRAQGPRSAGLKHGHSQEKLRAAAPGSPGLTQKNLAKEFDFPIPLSETSKIMKKNKKIQKIQNESSCHLLVRIHLDKN
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5506791..5506977,5516654..5516739,5520775..5520840)
location: region:5506791-5520840:1
so has part: feature:5506791-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5520775-5520840:1:exon

XP_044788523.1
type: Protein
SIO_000068: ncbiprotein

position:5520840:1
position: 5520840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506791-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5520775-5520840:1:exon

C19H5orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf47 homolog isoform X2
translation: MAAAGRELERDRARFVYVTRFGSHQCGGVLALGGRRAQGPRSAGLKHGHSQEKLRAAAPGSPGLTQKNLAKEFDFPIPLSETSKIMKKNKKVLVWNGVYKIISKMLEENEKYRLRLKCQQLSRENSKDTK
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5506791..5506977,5516654..5516739,5518763..5518862,5520775..5520794)
location: region:5506791-5520794:1
so has part: feature:5506791-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5520775-5520794:1:exon

XP_025126636.1
type: Protein
SIO_000068: ncbiprotein

position:5520794:1
position: 5520794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506791-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5520775-5520794:1:exon

C19H5orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf47 homolog isoform X2
translation: MAAAGRELERDRARFVYVTRFGSHQCGGVLALGGRRAQGPRSAGLKHGHSQEKLRAAAPGSPGLTQKNLAKEFDFPIPLSETSKIMKKNKKVLVWNGVYKIISKMLEENEKYRLRLKCQQLSRENSKDTK
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5506791..5506977,5516654..5516739,5518763..5518862,5520775..5520794)
location: region:5506791-5520794:1
so has part: feature:5506791-5506977:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5520775-5520794:1:exon

XP_044788521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5506791-5506977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5520775-5520794:1:exon

C19H5orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf47
product: chromosome 19 C5orf47 homolog, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932587.2
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5507073..5507385,5516654..5516739,5518763..5518862,5524385..5524566)
location: region:5507073-5524566:1
so has part: feature:5507073-5507385:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5524385-5524566:1:exon

position:5507073:1
position: 5507073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5507073-5507385:1:exon

position:5507385:1
position: 5507385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5524385-5524566:1:exon

C19H5orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89462
gene: C19H5orf47
product: chromosome 19 C5orf47 homolog, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044932589.2
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5507087..5507385,5516654..5516739,5518763..5518862,5520775..5520813,5524385..5524566)
location: region:5507087-5524566:1
so has part: feature:5507087-5507385:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5520775-5520813:1:exon
so has part: feature:5524385-5524566:1:exon

position:5507087:1
position: 5507087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5507087-5507385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5520775-5520813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5524385-5524566:1:exon

C19H5orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89462
gene: C19H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf47 homolog isoform X3
translation: MDSPPVGVGTKRRVRTALRSCPEKPQKCNEGLTQKNLAKEFDFPIPLSETSKIMKKNKKVLVWNGVYKIISKMLEENEKYRLRLKCQQLSRESLTYFCICLPKKIMKSLKMEF
SIO_010081: C19H5orf47
subclass of: SO_0000673
so part of: C19H5orf47
location: join(5507295..5507385,5516654..5516739,5518763..5518862,5524385..5524449)
location: region:5507295-5524449:1
so has part: feature:5507295-5507385:1:exon
so has part: feature:5516654-5516739:1:exon
so has part: feature:5518763-5518862:1:exon
so has part: feature:5524385-5524449:1:exon

XP_044788522.2
type: Protein
SIO_000068: ncbiprotein

position:5507295:1
position: 5507295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5507295-5507385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5516654-5516739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5518763-5518862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5524385-5524449:1:exon