Equus quagga isolate Etosha38 chromosome 21, UCLA_HA_Equagga_1.0, whole genome shotgun sequence.
type: Entry
definition: Equus quagga isolate Etosha38 chromosome 21, UCLA_HA_Equagga_1.0, whole genome shotgun sequence.
sequence version: NC_060287.1
sequence date: 2023-03-05
sequence: sequence
division: CON
label: NC_060287.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA805220
dblink: SAMN16526506
keyword: WGS
keyword: RefSeq
source: Equus quagga
organism: Equus quagga
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM038749.1.\nAssembly name: ASM2161350v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California Los\nAngeles on 2022/01/31. The original whole-genome shotgun project\nhas the accession JAKJSB000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California Los Angeles\nAssembly Date :: 19-DEC-2021\nAssembly Method :: RagTag reference assisted assembly v.\n 12-19-21; Supernova de novo assembly\n v. 01-19-2018\nGenome Representation :: Full\nExpected Final Version :: No\nReference-guided Assembly :: EquQua_UCLA_HA1.0\nGenome Coverage :: 48.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_021613505.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/03/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 41249279
topology: linear
so has quality: SO_0000987
location: 1..41249279
location: region:1-41249279:1
RO_0002162: 89248

NC_060287
type: RefSeq
SIO_000068: refseq

PRJNA805220
type: BioProject
SIO_000068: bioproject

SAMN16526506
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41249279:1
position: 41249279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-41249279:1:source
so part of: sequence
organism: Equus quagga
mol type: genomic DNA
isolate: Etosha38
specimen voucher: Etosha38
chromosome: 21
tissue type: Blood
country: Namibia:Etosha
collection date: 2008
collected by: Pauline Kamath, UC Berkeley

89248
type: Taxonomy
SIO_000068: taxonomy

LOC124231268
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231268
note: homer protein homolog 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2600..3652)
location: region:2600-3652:-1
so has part: feature:2600-3652:-1:exon

124231268
type: Gene
SIO_000068: ncbigene

position:2600:-1
position: 2600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652:-1
position: 3652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2600-3652:-1:exon

LOC124231268
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231268
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC124231268
subclass of: SO_0000673
so part of: LOC124231268
location: complement(2600..3652)
location: region:2600-3652:-1
so has part: feature:2600-3652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2600-3652:-1:exon

LOC124231489
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231489
note: ral guanine nucleotide dissociation stimulator-like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(81286..110928)
location: region:81286-110928:-1
so has part: feature:81286-110928:-1:exon
subclass of: SO_0000010

124231489
type: Gene
SIO_000068: ncbigene

position:81286:-1
position: 81286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110928:-1
position: 110928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81286-110928:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X22
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006886564.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81286..81587,82687..82719,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81286-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81286-81587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

position:110791:-1
position: 110791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

position:108976:-1
position: 108976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109362:-1
position: 109362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

position:108404:-1
position: 108404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108895:-1
position: 108895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

position:99382:-1
position: 99382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99473:-1
position: 99473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

position:99062:-1
position: 99062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99182:-1
position: 99182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

position:92110:-1
position: 92110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92197:-1
position: 92197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

position:90301:-1
position: 90301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90412:-1
position: 90412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

position:89544:-1
position: 89544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89736:-1
position: 89736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

position:87872:-1
position: 87872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88037:-1
position: 88037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

position:87701:-1
position: 87701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87756:-1
position: 87756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

position:86414:-1
position: 86414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86629:-1
position: 86629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

position:85947:-1
position: 85947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86047:-1
position: 86047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

position:85366:-1
position: 85366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85434:-1
position: 85434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:82687-82719:-1:exon

position:82687:-1
position: 82687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82719:-1
position: 82719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:81286-81587:-1:exon

position:81587:-1
position: 81587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006886546.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81286..81587,82687..82719,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81286-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81286-81587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

position:85333:-1
position: 85333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81286-81587:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006886556.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81286..81587,82687..82719,85328..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81286-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85328-85434:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81286-81587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85328-85434:-1:exon

position:85328:-1
position: 85328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81286-81587:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886563.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

position:81600:-1
position: 81600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82851-83884:-1:exon

position:82851:-1
position: 82851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83884:-1
position: 83884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81600-82318:-1:exon

position:82318:-1
position: 82318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886568.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..87962,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-87962:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-87962:-1:exon

position:87962:-1
position: 87962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82851-83884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886562.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..81996,82687..82719,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-81996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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urn:…
SIO_000300: 6
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SIO_000300: 13
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urn:…
SIO_000300: 14
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81600-81996:-1:exon

position:81996:-1
position: 81996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886559.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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SIO_000300: 12
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urn:…
SIO_000300: 14
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_046648297.1
SIO_010081: LOC124231489
subclass of: SO_0000673
so part of: LOC124231489
location: complement(join(81600..82719,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:81600-82719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81600-82719:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886560.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83010,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
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so has part: feature:108404-108895:-1:exon
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so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
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so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
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so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:82851-83010:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

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SIO_000300: 6
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82851-83010:-1:exon

position:83010:-1
position: 83010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886553.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83884,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

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SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

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SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

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SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82851-83884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886561.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..81996,82687..82719,85208..85258,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
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so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
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so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:85208-85258:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-81996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

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SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

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SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85208-85258:-1:exon

position:85208:-1
position: 85208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85258:-1
position: 85258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-81996:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886555.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82719,85208..85258,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:85208-85258:-1:exon
so has part: feature:81600-82719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85208-85258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81600-82719:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886558.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83010,85208..85258,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:85208-85258:-1:exon
so has part: feature:82851-83010:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85208-85258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82851-83010:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886552.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83884,85208..85258,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:85208-85258:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85208-85258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82851-83884:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886545.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..85258,85366..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85366-85434:-1:exon
so has part: feature:82851-85258:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85366-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82851-85258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_006886544.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..81996,82687..82719,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-81996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81600-81996:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886554.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..81996,82687..82719,83057..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:83057-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-81996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83057-83884:-1:exon

position:83057:-1
position: 83057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-81996:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886551.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,83057..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:83057-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83057-83884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886549.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82719,83057..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:83057-83884:-1:exon
so has part: feature:81600-82719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83057-83884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81600-82719:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886550.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..81996,82687..82719,82851..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-81996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82851-83884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-81996:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886543.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82851-83884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886557.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..81996,82687..82719,85328..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85328-85434:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-81996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85328-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81600-81996:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886548.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83884,85328..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:81600-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85328-85434:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85328-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82851-83884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886565.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109269,110791..110922))
location: region:81600-110922:-1
so has part: feature:110791-110922:-1:exon
so has part: feature:108976-109269:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

position:110922:-1
position: 110922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109269:-1:exon

position:109269:-1
position: 109269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82851-83884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886569.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(81600..82318,82687..82719,82851..83884,85333..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89699,90301..90412,91126..91654))
location: region:81600-91654:-1
so has part: feature:91126-91654:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89699:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85333-85434:-1:exon
so has part: feature:82851-83884:-1:exon
so has part: feature:82687-82719:-1:exon
so has part: feature:81600-82318:-1:exon

position:91654:-1
position: 91654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91126-91654:-1:exon

position:91126:-1
position: 91126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89544-89699:-1:exon

position:89699:-1
position: 89699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85333-85434:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:82851-83884:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82687-82719:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81600-82318:-1:exon

LOC124231489
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: LOC124231489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral guanine nucleotide dissociation stimulator-like 1
translation: MTFPGHRTELHPGHPPGAGEGVQILLSPWTRSRCIRPPTTASTGLGQCEKDSTLSPDQAHVMLTPRQAQWRTWQSPWTSLPREKLVHCYLPVHPPGLRHRPAGFRPAVPQLEQYLQNSWRPLHCPFFKLKGLYVQVTFTDSDVDCHHPLLVVHLELPEATEAEPQVPAPGLQATAEPEQWPVMEELFRKVVPSQCLSSSWCKRIKPRNEHLAPTIQATVDHFQRVVNFITTTCLRDPSRTARDRARLVEHWIQVAQECNILMNFSLHTVISALQKTSISRLENTWDEVSRRAPKTSRNCIEKTSP
SIO_010081: LOC124231489
subclass of: SO_0000673
so part of: LOC124231489
location: complement(join(85386..85434,85947..86047,86414..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92134))
location: region:85386-92134:-1
so has part: feature:92110-92134:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86414-86629:-1:exon
so has part: feature:85947-86047:-1:exon
so has part: feature:85386-85434:-1:exon

XP_046504253.1
type: Protein
SIO_000068: ncbiprotein

position:85386:-1
position: 85386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92134:-1
position: 92134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92110-92134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86414-86629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85947-86047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85386-85434:-1:exon

LOC124231489
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 89248
gene: LOC124231489
product: ral guanine nucleotide dissociation stimulator-like 1, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_006886567.1
SIO_010081: LOC124231489
so part of: LOC124231489
location: complement(join(85946..86047,86202..86629,87701..87756,87872..88037,89544..89736,90301..90412,92110..92197,99062..99182,99382..99473,108404..108895,108976..109362,110791..110928))
location: region:85946-110928:-1
so has part: feature:110791-110928:-1:exon
so has part: feature:108976-109362:-1:exon
so has part: feature:108404-108895:-1:exon
so has part: feature:99382-99473:-1:exon
so has part: feature:99062-99182:-1:exon
so has part: feature:92110-92197:-1:exon
so has part: feature:90301-90412:-1:exon
so has part: feature:89544-89736:-1:exon
so has part: feature:87872-88037:-1:exon
so has part: feature:87701-87756:-1:exon
so has part: feature:86202-86629:-1:exon
so has part: feature:85946-86047:-1:exon

position:85946:-1
position: 85946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110791-110928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108976-109362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108404-108895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99382-99473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99062-99182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92110-92197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90301-90412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89544-89736:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87872-88037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87701-87756:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86202-86629:-1:exon

position:86202:-1
position: 86202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:85946-86047:-1:exon

LOC124231302
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231302
note: uncharacterized LOC124231302; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 402612..412800
location: region:402612-412800:1
so has part: feature:402612-412800:1:exon
subclass of: SO_0000011

124231302
type: Gene
SIO_000068: ncbigene

position:402612:1
position: 402612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412800:1
position: 412800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402612-412800:1:exon

LOC124231302
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231302
product: uncharacterized LOC124231302
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886485.1
SIO_010081: LOC124231302
subclass of: SO_0000673
so part of: LOC124231302
location: join(402612..402723,409849..409920,412685..412800)
location: region:402612-412800:1
so has part: feature:402612-402723:1:exon
so has part: feature:409849-409920:1:exon
so has part: feature:412685-412800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402612-402723:1:exon

position:402723:1
position: 402723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409849-409920:1:exon

position:409849:1
position: 409849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409920:1
position: 409920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412685-412800:1:exon

position:412685:1
position: 412685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EPHA3
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: EPHA3
note: EPH receptor A3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(758152..1123838)
location: region:758152-1123838:-1
so has part: feature:758152-1123838:-1:exon
subclass of: SO_0000010

124231263
type: Gene
SIO_000068: ncbigene

position:758152:-1
position: 758152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123838:-1
position: 1123838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758152-1123838:-1:exon

EPHA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: EPHA3
product: EPH receptor A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_046647947.1
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(758152..760793,766272..766427,779746..779939,781446..781595,805794..806003,807642..807703,818162..818347,824578..824703,829548..829615,830297..830399,838170..838329,841005..841129,881534..881869,882557..882712,1022286..1022946,1104171..1104235,1123672..1123838))
location: region:758152-1123838:-1
so has part: feature:1123672-1123838:-1:exon
so has part: feature:1104171-1104235:-1:exon
so has part: feature:1022286-1022946:-1:exon
so has part: feature:882557-882712:-1:exon
so has part: feature:881534-881869:-1:exon
so has part: feature:841005-841129:-1:exon
so has part: feature:838170-838329:-1:exon
so has part: feature:830297-830399:-1:exon
so has part: feature:829548-829615:-1:exon
so has part: feature:824578-824703:-1:exon
so has part: feature:818162-818347:-1:exon
so has part: feature:807642-807703:-1:exon
so has part: feature:805794-806003:-1:exon
so has part: feature:781446-781595:-1:exon
so has part: feature:779746-779939:-1:exon
so has part: feature:766272-766427:-1:exon
so has part: feature:758152-760793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1123672-1123838:-1:exon

position:1123672:-1
position: 1123672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104171-1104235:-1:exon

position:1104171:-1
position: 1104171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104235:-1
position: 1104235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1022286-1022946:-1:exon

position:1022286:-1
position: 1022286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022946:-1
position: 1022946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:882557-882712:-1:exon

position:882557:-1
position: 882557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882712:-1
position: 882712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:881534-881869:-1:exon

position:881534:-1
position: 881534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881869:-1
position: 881869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:841005-841129:-1:exon

position:841005:-1
position: 841005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841129:-1
position: 841129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:838170-838329:-1:exon

position:838170:-1
position: 838170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838329:-1
position: 838329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:830297-830399:-1:exon

position:830297:-1
position: 830297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830399:-1
position: 830399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:829548-829615:-1:exon

position:829548:-1
position: 829548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829615:-1
position: 829615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:824578-824703:-1:exon

position:824578:-1
position: 824578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824703:-1
position: 824703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:818162-818347:-1:exon

position:818162:-1
position: 818162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818347:-1
position: 818347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:807642-807703:-1:exon

position:807642:-1
position: 807642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807703:-1
position: 807703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:805794-806003:-1:exon

position:805794:-1
position: 805794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806003:-1
position: 806003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:781446-781595:-1:exon

position:781446:-1
position: 781446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781595:-1
position: 781595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:779746-779939:-1:exon

position:779746:-1
position: 779746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779939:-1
position: 779939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:766272-766427:-1:exon

position:766272:-1
position: 766272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766427:-1
position: 766427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:758152-760793:-1:exon

position:760793:-1
position: 760793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: EPHA3
product: EPH receptor A3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_046647948.1
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(758152..760793,779746..779939,781446..781595,805794..806003,807642..807703,818162..818347,824578..824703,829548..829615,830297..830399,838170..838332,841005..841129,881534..881869,882557..882712,1022286..1022946,1104171..1104235,1123672..1123838))
location: region:758152-1123838:-1
so has part: feature:1123672-1123838:-1:exon
so has part: feature:1104171-1104235:-1:exon
so has part: feature:1022286-1022946:-1:exon
so has part: feature:882557-882712:-1:exon
so has part: feature:881534-881869:-1:exon
so has part: feature:841005-841129:-1:exon
so has part: feature:838170-838332:-1:exon
so has part: feature:830297-830399:-1:exon
so has part: feature:829548-829615:-1:exon
so has part: feature:824578-824703:-1:exon
so has part: feature:818162-818347:-1:exon
so has part: feature:807642-807703:-1:exon
so has part: feature:805794-806003:-1:exon
so has part: feature:781446-781595:-1:exon
so has part: feature:779746-779939:-1:exon
so has part: feature:758152-760793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1123672-1123838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104171-1104235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1022286-1022946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882557-882712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:881534-881869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841005-841129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:838170-838332:-1:exon

position:838332:-1
position: 838332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:830297-830399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829548-829615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824578-824703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818162-818347:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:807642-807703:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:805794-806003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:781446-781595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779746-779939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:758152-760793:-1:exon

EPHA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: EPHA3
product: EPH receptor A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_046647946.1
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(758152..760793,766272..766427,779746..779939,781446..781595,805794..806003,807642..807703,818162..818347,824578..824703,829548..829615,830297..830399,838170..838332,841005..841129,881534..881869,882557..882712,1022286..1022946,1104171..1104235,1123672..1123838))
location: region:758152-1123838:-1
so has part: feature:1123672-1123838:-1:exon
so has part: feature:1104171-1104235:-1:exon
so has part: feature:1022286-1022946:-1:exon
so has part: feature:882557-882712:-1:exon
so has part: feature:881534-881869:-1:exon
so has part: feature:841005-841129:-1:exon
so has part: feature:838170-838332:-1:exon
so has part: feature:830297-830399:-1:exon
so has part: feature:829548-829615:-1:exon
so has part: feature:824578-824703:-1:exon
so has part: feature:818162-818347:-1:exon
so has part: feature:807642-807703:-1:exon
so has part: feature:805794-806003:-1:exon
so has part: feature:781446-781595:-1:exon
so has part: feature:779746-779939:-1:exon
so has part: feature:766272-766427:-1:exon
so has part: feature:758152-760793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1123672-1123838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104171-1104235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1022286-1022946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882557-882712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:881534-881869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841005-841129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:838170-838332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830297-830399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829548-829615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824578-824703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818162-818347:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:807642-807703:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:805794-806003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:781446-781595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779746-779939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:766272-766427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:758152-760793:-1:exon

EPHA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: EPHA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 3 isoform X2
translation: MDCHLSVLLLLSCSALGCSGEVTVPPSNEVNLLDSKTVQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVSRNSAQKIYVELKFTLRDCNSIPLVSGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEVREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDAPRMYCSTEGEWLVPIGKCSCNAGYEEGGLMCRACRPGFYKASDGGMKCAKCPPHSSTPEDGSVNCRCENNYFRADRDPPSMACTRPPSAPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAINGVSELSSPPRQFAAVSITTNQAAPSPVITIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKEQETSYTILRARGTNVTISSLKPDTTYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGENSQVVMIAISAAGAILLLSGVTYVLIGRFCGYHKSKHGAEEKRLHFGNGHLKLPGLRTYVDPHTYEDPAQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDGFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKVVTSAAARPSNLLLDQSNVDVPTFRTPGDWLNGVRTAQCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(760688..760793,766272..766427,779746..779939,781446..781595,805794..806003,807642..807703,818162..818347,824578..824703,829548..829615,830297..830399,838170..838329,841005..841129,881534..881869,882557..882712,1022286..1022946,1104171..1104235,1123672..1123759))
location: region:760688-1123759:-1
so has part: feature:1123672-1123759:-1:exon
so has part: feature:1104171-1104235:-1:exon
so has part: feature:1022286-1022946:-1:exon
so has part: feature:882557-882712:-1:exon
so has part: feature:881534-881869:-1:exon
so has part: feature:841005-841129:-1:exon
so has part: feature:838170-838329:-1:exon
so has part: feature:830297-830399:-1:exon
so has part: feature:829548-829615:-1:exon
so has part: feature:824578-824703:-1:exon
so has part: feature:818162-818347:-1:exon
so has part: feature:807642-807703:-1:exon
so has part: feature:805794-806003:-1:exon
so has part: feature:781446-781595:-1:exon
so has part: feature:779746-779939:-1:exon
so has part: feature:766272-766427:-1:exon
so has part: feature:760688-760793:-1:exon

XP_046503903.1
type: Protein
SIO_000068: ncbiprotein

position:760688:-1
position: 760688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123759:-1
position: 1123759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1123672-1123759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104171-1104235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1022286-1022946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882557-882712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:881534-881869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841005-841129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:838170-838329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830297-830399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829548-829615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824578-824703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818162-818347:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:807642-807703:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:805794-806003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:781446-781595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779746-779939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:766272-766427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760688-760793:-1:exon

EPHA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: EPHA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 3 isoform X3
translation: MDCHLSVLLLLSCSALGCSGEVTVPPSNEVNLLDSKTVQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVSRNSAQKIYVELKFTLRDCNSIPLVSGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEVREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDAPRMYCSTEGEWLVPIGKCSCNAGYEEGGLMCRACRPGFYKASDGGMKCAKCPPHSSTPEDGSVNCRCENNYFRADRDPPSMACTRPPSAPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAINGVSELSSPPRQFAAVSITTNQAAPSPVITIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKQEQETSYTILRARGTNVTISSLKPDTTYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGENSQVVMIAISAAGAILLLSGVTYVLIGRFCGYHKSKHGAEEKRLHFGNGHLKLPGLRTYVDPHTYEDPAQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDGFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKVVTSAAASDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(760688..760793,779746..779939,781446..781595,805794..806003,807642..807703,818162..818347,824578..824703,829548..829615,830297..830399,838170..838332,841005..841129,881534..881869,882557..882712,1022286..1022946,1104171..1104235,1123672..1123759))
location: region:760688-1123759:-1
so has part: feature:1123672-1123759:-1:exon
so has part: feature:1104171-1104235:-1:exon
so has part: feature:1022286-1022946:-1:exon
so has part: feature:882557-882712:-1:exon
so has part: feature:881534-881869:-1:exon
so has part: feature:841005-841129:-1:exon
so has part: feature:838170-838332:-1:exon
so has part: feature:830297-830399:-1:exon
so has part: feature:829548-829615:-1:exon
so has part: feature:824578-824703:-1:exon
so has part: feature:818162-818347:-1:exon
so has part: feature:807642-807703:-1:exon
so has part: feature:805794-806003:-1:exon
so has part: feature:781446-781595:-1:exon
so has part: feature:779746-779939:-1:exon
so has part: feature:760688-760793:-1:exon

XP_046503904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1123672-1123759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104171-1104235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1022286-1022946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882557-882712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:881534-881869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841005-841129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:838170-838332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830297-830399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829548-829615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824578-824703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818162-818347:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:807642-807703:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:805794-806003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:781446-781595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779746-779939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760688-760793:-1:exon

EPHA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: EPHA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 3 isoform X1
translation: MDCHLSVLLLLSCSALGCSGEVTVPPSNEVNLLDSKTVQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVSRNSAQKIYVELKFTLRDCNSIPLVSGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEVREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDAPRMYCSTEGEWLVPIGKCSCNAGYEEGGLMCRACRPGFYKASDGGMKCAKCPPHSSTPEDGSVNCRCENNYFRADRDPPSMACTRPPSAPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAINGVSELSSPPRQFAAVSITTNQAAPSPVITIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKQEQETSYTILRARGTNVTISSLKPDTTYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGENSQVVMIAISAAGAILLLSGVTYVLIGRFCGYHKSKHGAEEKRLHFGNGHLKLPGLRTYVDPHTYEDPAQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDGFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKVVTSAAARPSNLLLDQSNVDVPTFRTPGDWLNGVRTAQCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(760688..760793,766272..766427,779746..779939,781446..781595,805794..806003,807642..807703,818162..818347,824578..824703,829548..829615,830297..830399,838170..838332,841005..841129,881534..881869,882557..882712,1022286..1022946,1104171..1104235,1123672..1123759))
location: region:760688-1123759:-1
so has part: feature:1123672-1123759:-1:exon
so has part: feature:1104171-1104235:-1:exon
so has part: feature:1022286-1022946:-1:exon
so has part: feature:882557-882712:-1:exon
so has part: feature:881534-881869:-1:exon
so has part: feature:841005-841129:-1:exon
so has part: feature:838170-838332:-1:exon
so has part: feature:830297-830399:-1:exon
so has part: feature:829548-829615:-1:exon
so has part: feature:824578-824703:-1:exon
so has part: feature:818162-818347:-1:exon
so has part: feature:807642-807703:-1:exon
so has part: feature:805794-806003:-1:exon
so has part: feature:781446-781595:-1:exon
so has part: feature:779746-779939:-1:exon
so has part: feature:766272-766427:-1:exon
so has part: feature:760688-760793:-1:exon

XP_046503902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1123672-1123759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104171-1104235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1022286-1022946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882557-882712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:881534-881869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841005-841129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:838170-838332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830297-830399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829548-829615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824578-824703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818162-818347:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:807642-807703:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:805794-806003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:781446-781595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779746-779939:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:766272-766427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760688-760793:-1:exon

CSNKA2IP
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: CSNKA2IP
note: casein kinase 2 subunit alpha' interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1653094..1655271)
location: region:1653094-1655271:-1
so has part: feature:1653094-1655271:-1:exon
subclass of: SO_0000010

124231518
type: Gene
SIO_000068: ncbigene

position:1653094:-1
position: 1653094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655271:-1
position: 1655271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1653094-1655271:-1:exon

CSNKA2IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CSNKA2IP
product: casein kinase 2 subunit alpha' interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_046648329.1
SIO_010081: CSNKA2IP
subclass of: SO_0000673
so part of: CSNKA2IP
location: complement(1653094..1655271)
location: region:1653094-1655271:-1
so has part: feature:1653094-1655271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1653094-1655271:-1:exon

CSNKA2IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CSNKA2IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase II subunit alpha'-interacting protein
translation: MVPLAYYDQPFVPLAHSYQLATTNSLTPQCMGEKLNQPNDQSVVRVQSHNDNPAAPPLNSNQKVQRCSILPSAKSQDTISPGFYNRVLKSPLPHSERQATPSLNLPWRTSLRPNQRTLNSPFFHPKPQTTSSLDLKKTSTSLEPSQTALRSQLPFPKTWKTSSLDLCWTSPSPKSNQRVSSSSLSPLKYQETPSLDNLWTSSSLGPNQRALNSTLPHTKTEKTFSLNSLWTSLLEHNQRSLSSPSLNLIPQTNDVLHSSPSMEPSQMALSSQLPDSRPQTIPILSSNSSILSLSLSNSKSKLSPLPHSVHQTQSLPLFRPKPQTMLTLDRDVRTLSSPICHSKFQNTISPNDKYRATGLSSPYPKLNVSGRSLSSSTHHIRNKAASTLGSRLLSKSSFDFRAKTEPNKEIPWTLDYIYPCIVKGGTIPDDVLNKIVNSLSKNRIQRDLSRQILFRRMRGRPNPHPGPRLSSSYVVCLACASCIKSQCNHLTGRKDPRSATLFVIPTPEPSSEGKIKVKLVLILCLPQTSFSSCLPCPVKENQPEESSEDNFEEVEKISQFSPPSEPDITQGLNMKTTRLTVARENKVVSQQPQAVDWLLYVKKSSNSLPKPLLSASSSSTSSSSSSSCSSSFSSSSTSPHPSKESTTSTLSGCVFTKVLGDHKLPPGVSWLEFICSKNHQPLPGKPHPSQSPPPQIRPVRSSTPGKGPKGSKILFKLFQTKSQNE
SIO_010081: CSNKA2IP
subclass of: SO_0000673
so part of: CSNKA2IP
location: complement(1653094..1655271)
location: region:1653094-1655271:-1
so has part: feature:1653094-1655271:-1:exon

XP_046504285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1653094-1655271:-1:exon

C21H3orf38
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: C21H3orf38
note: chromosome 21 C3orf38 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1956566..1971230)
location: region:1956566-1971230:-1
so has part: feature:1956566-1971230:-1:exon
subclass of: SO_0000010

124231479
type: Gene
SIO_000068: ncbigene

position:1956566:-1
position: 1956566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971230:-1
position: 1971230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1956566-1971230:-1:exon

C21H3orf38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: C21H3orf38
product: chromosome 21 C3orf38 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648285.1
SIO_010081: C21H3orf38
subclass of: SO_0000673
so part of: C21H3orf38
location: complement(join(1956566..1964958,1966493..1966731,1967957..1971230))
location: region:1956566-1971230:-1
so has part: feature:1967957-1971230:-1:exon
so has part: feature:1966493-1966731:-1:exon
so has part: feature:1956566-1964958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1967957-1971230:-1:exon

position:1967957:-1
position: 1967957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1966493-1966731:-1:exon

position:1966493:-1
position: 1966493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966731:-1
position: 1966731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1956566-1964958:-1:exon

position:1964958:-1
position: 1964958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H3orf38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: C21H3orf38
product: chromosome 21 C3orf38 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648284.1
SIO_010081: C21H3orf38
subclass of: SO_0000673
so part of: C21H3orf38
location: complement(join(1956566..1964961,1966493..1966731,1967957..1971228))
location: region:1956566-1971228:-1
so has part: feature:1967957-1971228:-1:exon
so has part: feature:1966493-1966731:-1:exon
so has part: feature:1956566-1964961:-1:exon

position:1971228:-1
position: 1971228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1967957-1971228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1966493-1966731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956566-1964961:-1:exon

position:1964961:-1
position: 1964961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H3orf38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: C21H3orf38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf38 homolog isoform X2
translation: MLTSLIWREHGRRQASDNAPPAGPRCGPVGCRPPATGPRRRPGFPGAGPTRARGRLRRASATEAGDGRWRSPVGTGAQGGPAAYGPRGPRAGRAGRRSRSAAGVPGGAPRGAGAPGGDAACAVGRRRRGSQPALPGPRSLRGAPPQDRLPTPALRYARRRLSADAALPKAGRARRLSVPAARQAVRGAAFLRDLTGDHFRRGSGIPEAPGGEHRQALPVSVAEAPAGGRGGDVVGVVLSRRLGVEMSGLSYPEMEGCRNLLGLLDNDEITALCDTVTNRLVQPDDRQDAIRAILVYSQSAEELLRRRKVHREVIFKYLAAQGVIIPPATEKHNLIQHAKDYWKKQLQLKLKETPEPVKTENVRVFQQEKEDKKAEKVDFHRLGEEFCHWFFQLLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYKTSEQNVIDYHGADIVSLRLLSLVKEEYLFLSPNLDSRGLKCASSPHGLVMVGVAGTVHRGNSCLGIFEQIFGLIRCPFVENTWKIKFINLRIIGEGSLAPGKLMEPAITFEPSDLEAFHNVITLCGTNEVYGLM
SIO_010081: C21H3orf38
subclass of: SO_0000673
so part of: C21H3orf38
location: complement(join(1964383..1964958,1966493..1966731,1967957..1968818))
location: region:1964383-1968818:-1
so has part: feature:1967957-1968818:-1:exon
so has part: feature:1966493-1966731:-1:exon
so has part: feature:1964383-1964958:-1:exon

XP_046504241.1
type: Protein
SIO_000068: ncbiprotein

position:1964383:-1
position: 1964383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968818:-1
position: 1968818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1967957-1968818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1966493-1966731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1964383-1964958:-1:exon

C21H3orf38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: C21H3orf38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf38 homolog isoform X1
translation: MLTSLIWREHGRRQASDNAPPAGPRCGPVGCRPPATGPRRRPGFPGAGPTRARGRLRRASATEAGDGRWRSPVGTGAQGGPAAYGPRGPRAGRAGRRSRSAAGVPGGAPRGAGAPGGDAACAVGRRRRGSQPALPGPRSLRGAPPQDRLPTPALRYARRRLSADAALPKAGRARRLSVPAARQAVRGAAFLRDLTGDHFRRGSGIPEAPGGEHRQALPVSVAEAPAGGRGGDVVGVVLSRRLGVEMSGLSYPEMEGCRNLLGLLDNDEITALCDTVTNRLVQPDDRQDAIRAILVYSQSAEELLRRRKVHREVIFKYLAAQGVIIPPATEKHNLIQHAKDYWKKQLQLKLKETPEPVKTENVRVFQQQEKEDKKAEKVDFHRLGEEFCHWFFQLLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYKTSEQNVIDYHGADIVSLRLLSLVKEEYLFLSPNLDSRGLKCASSPHGLVMVGVAGTVHRGNSCLGIFEQIFGLIRCPFVENTWKIKFINLRIIGEGSLAPGKLMEPAITFEPSDLEAFHNVITLCGTNEVYGLM
SIO_010081: C21H3orf38
subclass of: SO_0000673
so part of: C21H3orf38
location: complement(join(1964383..1964961,1966493..1966731,1967957..1968818))
location: region:1964383-1968818:-1
so has part: feature:1967957-1968818:-1:exon
so has part: feature:1966493-1966731:-1:exon
so has part: feature:1964383-1964961:-1:exon

XP_046504240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1967957-1968818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1966493-1966731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1964383-1964961:-1:exon

ZNF654
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: ZNF654
note: zinc finger protein 654; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1973167..2033389)
location: region:1973167-2033389:-1
so has part: feature:1973167-2033389:-1:exon
subclass of: SO_0000010

124231478
type: Gene
SIO_000068: ncbigene

position:1973167:-1
position: 1973167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033389:-1
position: 2033389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1973167-2033389:-1:exon

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ZNF654
product: zinc finger protein 654, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648282.1
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(1973167..1976274,1976870..1979213,1983058..1983199,1993575..1993714,1994303..1994505,1996206..1997323))
location: region:1973167-1997323:-1
so has part: feature:1996206-1997323:-1:exon
so has part: feature:1994303-1994505:-1:exon
so has part: feature:1993575-1993714:-1:exon
so has part: feature:1983058-1983199:-1:exon
so has part: feature:1976870-1979213:-1:exon
so has part: feature:1973167-1976274:-1:exon

position:1997323:-1
position: 1997323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1996206-1997323:-1:exon

position:1996206:-1
position: 1996206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1994303-1994505:-1:exon

position:1994303:-1
position: 1994303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994505:-1
position: 1994505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1993575-1993714:-1:exon

position:1993575:-1
position: 1993575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993714:-1
position: 1993714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1983058-1983199:-1:exon

position:1983058:-1
position: 1983058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1983199:-1
position: 1983199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1976870-1979213:-1:exon

position:1976870:-1
position: 1976870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1979213:-1
position: 1979213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1973167-1976274:-1:exon

position:1976274:-1
position: 1976274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X2
translation: MALIKSCINHPEISKDLYFHQALFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPKTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYHTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLNESTLENCTGNLKKAVEQQGLDKGLDSLTDQSTGELDSDEIPGVQPKGHINTKKNFTALNASKVDHSVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAPQQEDQEIPALEEINCSNSFISFENGNSHNKDLEVETITVSSDGNKEVIPAHVAEFTEIPISVSEDIENIIENGSPDASLNKVAEPLPVCEDDYEEEEDEEGDYEEDDYDLNQETSVLHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHARTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNAYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSEAILWDVLTDTNPNRQEKDSSSNEKQTVSLPVSTSKSRKDSAEPKTCIESMEKKTDSLVQNGNEHSDDTVSDISLIDQKMPDIEPNAENNCSISDLVNGHSGIEQTPLVSSDPALKTDTNRIRTENGSILPSVVPQEHNTLPASQAPSKPNLTTEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVCKKSVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESA
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(1976267..1976274,1976870..1979213,1983058..1983199,1993575..1993714,1994303..1994419))
location: region:1976267-1994419:-1
so has part: feature:1994303-1994419:-1:exon
so has part: feature:1993575-1993714:-1:exon
so has part: feature:1983058-1983199:-1:exon
so has part: feature:1976870-1979213:-1:exon
so has part: feature:1976267-1976274:-1:exon

XP_046504238.1
type: Protein
SIO_000068: ncbiprotein

position:1976267:-1
position: 1976267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994419:-1
position: 1994419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994303-1994419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993575-1993714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1983058-1983199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976870-1979213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1976267-1976274:-1:exon

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ZNF654
product: zinc finger protein 654, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_046648283.1
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(1976283..1979213,1983058..1983199,1993575..1993714,1994303..1994505,1997188..1997323,2011416..2011497,2033237..2033389))
location: region:1976283-2033389:-1
so has part: feature:2033237-2033389:-1:exon
so has part: feature:2011416-2011497:-1:exon
so has part: feature:1997188-1997323:-1:exon
so has part: feature:1994303-1994505:-1:exon
so has part: feature:1993575-1993714:-1:exon
so has part: feature:1983058-1983199:-1:exon
so has part: feature:1976283-1979213:-1:exon

position:1976283:-1
position: 1976283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2033237-2033389:-1:exon

position:2033237:-1
position: 2033237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2011416-2011497:-1:exon

position:2011416:-1
position: 2011416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2011497:-1
position: 2011497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1997188-1997323:-1:exon

position:1997188:-1
position: 1997188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1994303-1994505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1993575-1993714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983058-1983199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1976283-1979213:-1:exon

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ZNF654
product: zinc finger protein 654, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_046648281.1
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(1976283..1979213,1983058..1983199,1993575..1993714,1994303..1994505,2011416..2011488))
location: region:1976283-2011488:-1
so has part: feature:2011416-2011488:-1:exon
so has part: feature:1994303-1994505:-1:exon
so has part: feature:1993575-1993714:-1:exon
so has part: feature:1983058-1983199:-1:exon
so has part: feature:1976283-1979213:-1:exon

position:2011488:-1
position: 2011488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2011416-2011488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1994303-1994505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993575-1993714:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1983058-1983199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1976283-1979213:-1:exon

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ZNF654
product: zinc finger protein 654, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_046648280.1
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(1976283..1979213,1983058..1983199,1993575..1993714,1994303..1994505,1996206..1997323))
location: region:1976283-1997323:-1
so has part: feature:1996206-1997323:-1:exon
so has part: feature:1994303-1994505:-1:exon
so has part: feature:1993575-1993714:-1:exon
so has part: feature:1983058-1983199:-1:exon
so has part: feature:1976283-1979213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1996206-1997323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1994303-1994505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993575-1993714:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1983058-1983199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1976283-1979213:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X1
translation: MALIKSCINHPEISKDLYFHQALFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPKTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYHTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLNESTLENCTGNLKKAVEQQGLDKGLDSLTDQSTGELDSDEIPGVQPKGHINTKKNFTALNASKVDHSVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAPQQEDQEIPALEEINCSNSFISFENGNSHNKDLEVETITVSSDGNKEVIPAHVAEFTEIPISVSEDIENIIENGSPDASLNKVAEPLPVCEDDYEEEEDEEGDYEEDDYDLNQETSVLHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHARTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNAYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSEAILWDVLTDTNPNRQEKDSSSNEKQTVSLPVSTSKSRKDSAEPKTCIESMEKKTDSLVQNGNEHSDDTVSDISLIDQKMPDIEPNAENNCSISDLVNGHSGIEQTPLVSSDPALKTDTNRIRTENGSILPSVVPQEHNTLPASQAPSKPNLTTEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVCKKSVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESKSSVFSVGISVEIENAIDLYKVKKLTFVCQLIKHYPILYFL
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(1976742..1979213,1983058..1983199,1993575..1993714,1994303..1994419))
location: region:1976742-1994419:-1
so has part: feature:1994303-1994419:-1:exon
so has part: feature:1993575-1993714:-1:exon
so has part: feature:1983058-1983199:-1:exon
so has part: feature:1976742-1979213:-1:exon

XP_046504236.1
type: Protein
SIO_000068: ncbiprotein

position:1976742:-1
position: 1976742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994303-1994419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993575-1993714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1983058-1983199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976742-1979213:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X1
translation: MALIKSCINHPEISKDLYFHQALFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPKTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYHTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLNESTLENCTGNLKKAVEQQGLDKGLDSLTDQSTGELDSDEIPGVQPKGHINTKKNFTALNASKVDHSVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAPQQEDQEIPALEEINCSNSFISFENGNSHNKDLEVETITVSSDGNKEVIPAHVAEFTEIPISVSEDIENIIENGSPDASLNKVAEPLPVCEDDYEEEEDEEGDYEEDDYDLNQETSVLHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHARTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNAYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSEAILWDVLTDTNPNRQEKDSSSNEKQTVSLPVSTSKSRKDSAEPKTCIESMEKKTDSLVQNGNEHSDDTVSDISLIDQKMPDIEPNAENNCSISDLVNGHSGIEQTPLVSSDPALKTDTNRIRTENGSILPSVVPQEHNTLPASQAPSKPNLTTEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVCKKSVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESKSSVFSVGISVEIENAIDLYKVKKLTFVCQLIKHYPILYFL
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(1976742..1979213,1983058..1983199,1993575..1993714,1994303..1994419))
location: region:1976742-1994419:-1
so has part: feature:1994303-1994419:-1:exon
so has part: feature:1993575-1993714:-1:exon
so has part: feature:1983058-1983199:-1:exon
so has part: feature:1976742-1979213:-1:exon

XP_046504237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1994303-1994419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993575-1993714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1983058-1983199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976742-1979213:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X1
translation: MALIKSCINHPEISKDLYFHQALFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPKTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYHTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLNESTLENCTGNLKKAVEQQGLDKGLDSLTDQSTGELDSDEIPGVQPKGHINTKKNFTALNASKVDHSVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAPQQEDQEIPALEEINCSNSFISFENGNSHNKDLEVETITVSSDGNKEVIPAHVAEFTEIPISVSEDIENIIENGSPDASLNKVAEPLPVCEDDYEEEEDEEGDYEEDDYDLNQETSVLHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHARTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNAYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSEAILWDVLTDTNPNRQEKDSSSNEKQTVSLPVSTSKSRKDSAEPKTCIESMEKKTDSLVQNGNEHSDDTVSDISLIDQKMPDIEPNAENNCSISDLVNGHSGIEQTPLVSSDPALKTDTNRIRTENGSILPSVVPQEHNTLPASQAPSKPNLTTEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVCKKSVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESKSSVFSVGISVEIENAIDLYKVKKLTFVCQLIKHYPILYFL
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(1976742..1979213,1983058..1983199,1993575..1993714,1994303..1994419))
location: region:1976742-1994419:-1
so has part: feature:1994303-1994419:-1:exon
so has part: feature:1993575-1993714:-1:exon
so has part: feature:1983058-1983199:-1:exon
so has part: feature:1976742-1979213:-1:exon

XP_046504239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1994303-1994419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993575-1993714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1983058-1983199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976742-1979213:-1:exon

LOC124231480
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231480
note: thioredoxin reductase-like selenoprotein T; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1984633..1986423)
location: region:1984633-1986423:-1
so has part: feature:1984633-1986423:-1:exon

124231480
type: Gene
SIO_000068: ncbigene

position:1984633:-1
position: 1984633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1986423:-1
position: 1986423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984633-1986423:-1:exon

LOC124231480
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231480
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC124231480
subclass of: SO_0000673
so part of: LOC124231480
location: complement(1984633..1986423)
location: region:1984633-1986423:-1
so has part: feature:1984633-1986423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1984633-1986423:-1:exon

CGGBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: CGGBP1
note: CGG triplet repeat binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2061668..2068101
location: region:2061668-2068101:1
so has part: feature:2061668-2068101:1:exon
subclass of: SO_0000010

124231352
type: Gene
SIO_000068: ncbigene

position:2061668:1
position: 2061668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068101:1
position: 2068101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2061668-2068101:1:exon

CGGBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CGGBP1
product: CGG triplet repeat binding protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648116.1
SIO_010081: CGGBP1
subclass of: SO_0000673
so part of: CGGBP1
location: join(2061668..2062071,2064215..2068101)
location: region:2061668-2068101:1
so has part: feature:2061668-2062071:1:exon
so has part: feature:2064215-2068101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2061668-2062071:1:exon

position:2062071:1
position: 2062071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2064215-2068101:1:exon

position:2064215:1
position: 2064215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CGGBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CGGBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CGG triplet repeat-binding protein 1
translation: MERFVVTAPPARNRSKTALYVTPLDRVTEFGGELHEDGGKLFCTSCNVVLNHVRKSAISDHLKSKTHTKRKAEFEEQNVRKKQRPLTASLQCNSTAQTEKVSVIQDFVKMCLEANIPLEKADHPAVRAFLSRHVKNGGSIPKSDQLRRAYLPDGYENENQLLNSQDC
SIO_010081: CGGBP1
subclass of: SO_0000673
so part of: CGGBP1
location: 2064234..2064737
location: region:2064234-2064737:1
so has part: feature:2064234-2064737:1:exon

XP_046504072.1
type: Protein
SIO_000068: ncbiprotein

position:2064234:1
position: 2064234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064737:1
position: 2064737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064234-2064737:1:exon

HTR1F
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: HTR1F
note: 5-hydroxytryptamine receptor 1F; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2126536..2127636)
location: region:2126536-2127636:-1
so has part: feature:2126536-2127636:-1:exon
subclass of: SO_0000010

124231244
type: Gene
SIO_000068: ncbigene

position:2126536:-1
position: 2126536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2127636:-1
position: 2127636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2126536-2127636:-1:exon

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_046647920.1
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(2126536..2127636)
location: region:2126536-2127636:-1
so has part: feature:2126536-2127636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2126536-2127636:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MDFLNSSDQNLTTEEMLYRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISIFISMPPLFWRHQGTSREDECIIKHDHIVSTIYSTFGAFYIPLTLILILYYKIYKAAKMLYHKRQASRIAKEELNGQVLLESGEKSTRLVSTPYTLEKSLSDPSTDLDKIHSAVKSPKSEFKHDKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEEMSNFLTWLGYLNSLINPLIYTAFNEDFKKAFQKLARCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(2126536..2127636)
location: region:2126536-2127636:-1
so has part: feature:2126536-2127636:-1:exon

XP_046503876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2126536-2127636:-1:exon

LOC124231539
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231539
note: 60S ribosomal protein L5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2633200..2634106
location: region:2633200-2634106:1
so has part: feature:2633200-2634106:1:exon

124231539
type: Gene
SIO_000068: ncbigene

position:2633200:1
position: 2633200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2634106:1
position: 2634106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2633200-2634106:1:exon

LOC124231539
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231539
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC124231539
subclass of: SO_0000673
so part of: LOC124231539
location: 2633200..2634106
location: region:2633200-2634106:1
so has part: feature:2633200-2634106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2633200-2634106:1:exon

POU1F1
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: POU1F1
note: POU class 1 homeobox 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2677945..2692830
location: region:2677945-2692830:1
so has part: feature:2677945-2692830:1:exon
subclass of: SO_0000010

124231273
type: Gene
SIO_000068: ncbigene

position:2677945:1
position: 2677945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2692830:1
position: 2692830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2677945-2692830:1:exon

POU1F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: POU1F1
product: POU class 1 homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_046647965.1
SIO_010081: POU1F1
subclass of: SO_0000673
so part of: POU1F1
location: join(2677945..2678086,2680864..2681013,2688454..2688678,2690779..2690943,2691699..2691759,2692620..2692830)
location: region:2677945-2692830:1
so has part: feature:2677945-2678086:1:exon
so has part: feature:2680864-2681013:1:exon
so has part: feature:2688454-2688678:1:exon
so has part: feature:2690779-2690943:1:exon
so has part: feature:2691699-2691759:1:exon
so has part: feature:2692620-2692830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2677945-2678086:1:exon

position:2678086:1
position: 2678086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2680864-2681013:1:exon

position:2680864:1
position: 2680864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681013:1
position: 2681013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2688454-2688678:1:exon

position:2688454:1
position: 2688454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2688678:1
position: 2688678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2690779-2690943:1:exon

position:2690779:1
position: 2690779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2690943:1
position: 2690943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2691699-2691759:1:exon

position:2691699:1
position: 2691699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2691759:1
position: 2691759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2692620-2692830:1:exon

position:2692620:1
position: 2692620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POU1F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: POU1F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pituitary-specific positive transcription factor 1
translation: MSCQPFTSADTFMPLNSESSAALPLIMHHSAAECLPVSNHATNVMSTVPSILSLIQTPKCLCTYFSVTTLGNTATGLHYSVPSCHYGNQSSTYGVMAGSLTPCLYKFPDHTLGHGFPPMHQPLLAEDPAAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEKVGVNERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKTSLNQSLFTISKEHLECR
SIO_010081: POU1F1
subclass of: SO_0000673
so part of: POU1F1
location: join(2677945..2678086,2680864..2681013,2688454..2688678,2690779..2690943,2691699..2691759,2692620..2692830)
location: region:2677945-2692830:1
so has part: feature:2677945-2678086:1:exon
so has part: feature:2680864-2681013:1:exon
so has part: feature:2688454-2688678:1:exon
so has part: feature:2690779-2690943:1:exon
so has part: feature:2691699-2691759:1:exon
so has part: feature:2692620-2692830:1:exon

XP_046503921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2677945-2678086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2680864-2681013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2688454-2688678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690779-2690943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691699-2691759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2692620-2692830:1:exon

CHMP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: CHMP2B
note: charged multivesicular body protein 2B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2697032..2723390)
location: region:2697032-2723390:-1
so has part: feature:2697032-2723390:-1:exon
subclass of: SO_0000010

124231391
type: Gene
SIO_000068: ncbigene

position:2697032:-1
position: 2697032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723390:-1
position: 2723390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697032-2723390:-1:exon

CHMP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CHMP2B
product: charged multivesicular body protein 2B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648177.1
SIO_010081: CHMP2B
subclass of: SO_0000673
so part of: CHMP2B
location: complement(join(2697032..2698733,2698925..2699031,2701578..2701680,2705149..2705343,2710067..2710158,2722969..2723390))
location: region:2697032-2723390:-1
so has part: feature:2722969-2723390:-1:exon
so has part: feature:2710067-2710158:-1:exon
so has part: feature:2705149-2705343:-1:exon
so has part: feature:2701578-2701680:-1:exon
so has part: feature:2698925-2699031:-1:exon
so has part: feature:2697032-2698733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2722969-2723390:-1:exon

position:2722969:-1
position: 2722969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2710067-2710158:-1:exon

position:2710067:-1
position: 2710067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2710158:-1
position: 2710158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2705149-2705343:-1:exon

position:2705149:-1
position: 2705149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705343:-1
position: 2705343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2701578-2701680:-1:exon

position:2701578:-1
position: 2701578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2701680:-1
position: 2701680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2698925-2699031:-1:exon

position:2698925:-1
position: 2698925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699031:-1
position: 2699031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2697032-2698733:-1:exon

position:2698733:-1
position: 2698733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHMP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CHMP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2b
translation: MASLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKVDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDEEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISDEEIERQLKALGVD
SIO_010081: CHMP2B
subclass of: SO_0000673
so part of: CHMP2B
location: complement(join(2698623..2698733,2698925..2699031,2701578..2701680,2705149..2705343,2710067..2710158,2722969..2723002))
location: region:2698623-2723002:-1
so has part: feature:2722969-2723002:-1:exon
so has part: feature:2710067-2710158:-1:exon
so has part: feature:2705149-2705343:-1:exon
so has part: feature:2701578-2701680:-1:exon
so has part: feature:2698925-2699031:-1:exon
so has part: feature:2698623-2698733:-1:exon

XP_046504133.1
type: Protein
SIO_000068: ncbiprotein

position:2698623:-1
position: 2698623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723002:-1
position: 2723002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2722969-2723002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2710067-2710158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2705149-2705343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2701578-2701680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2698925-2699031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2698623-2698733:-1:exon

LOC124231519
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231519
note: 40S ribosomal protein SA-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2830440..2834443
location: region:2830440-2834443:1
so has part: feature:2830440-2834443:1:exon

124231519
type: Gene
SIO_000068: ncbigene

position:2830440:1
position: 2830440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2834443:1
position: 2834443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830440-2834443:1:exon

LOC124231519
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231519
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
pseudo: true
SIO_010081: LOC124231519
subclass of: SO_0000673
so part of: LOC124231519
location: 2830440..2830760
location: region:2830440-2830760:1
so has part: feature:2830440-2830760:1:exon

position:2830760:1
position: 2830760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830440-2830760:1:exon

LOC124231519
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231519
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
pseudo: true
SIO_010081: LOC124231519
subclass of: SO_0000673
so part of: LOC124231519
location: 2833582..2834443
location: region:2833582-2834443:1
so has part: feature:2833582-2834443:1:exon

position:2833582:1
position: 2833582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2833582-2834443:1:exon

LOC124231300
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231300
note: tigger transposable element-derived protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2841555..2843587
location: region:2841555-2843587:1
so has part: feature:2841555-2843587:1:exon

124231300
type: Gene
SIO_000068: ncbigene

position:2841555:1
position: 2841555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843587:1
position: 2843587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2841555-2843587:1:exon

LOC124231300
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC124231300
subclass of: SO_0000673
so part of: LOC124231300
location: 2841555..2842003
location: region:2841555-2842003:1
so has part: feature:2841555-2842003:1:exon

position:2842003:1
position: 2842003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2841555-2842003:1:exon

LOC124231300
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC124231300
subclass of: SO_0000673
so part of: LOC124231300
location: 2842295..2843587
location: region:2842295-2843587:1
so has part: feature:2842295-2843587:1:exon

position:2842295:1
position: 2842295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2842295-2843587:1:exon

VGLL3
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: VGLL3
note: vestigial like family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2949183..3003930
location: region:2949183-3003930:1
so has part: feature:2949183-3003930:1:exon
subclass of: SO_0000010

124231334
type: Gene
SIO_000068: ncbigene

position:2949183:1
position: 2949183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3003930:1
position: 3003930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949183-3003930:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: VGLL3
product: vestigial like family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_046648078.1
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(2949183..2949824,2961751..2962015,2977078..2977602,2997811..3003930)
location: region:2949183-3003930:1
so has part: feature:2949183-2949824:1:exon
so has part: feature:2961751-2962015:1:exon
so has part: feature:2977078-2977602:1:exon
so has part: feature:2997811-3003930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2949183-2949824:1:exon

position:2949824:1
position: 2949824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2961751-2962015:1:exon

position:2961751:1
position: 2961751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962015:1
position: 2962015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2977078-2977602:1:exon

position:2977078:1
position: 2977078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2977602:1
position: 2977602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2997811-3003930:1:exon

position:2997811:1
position: 2997811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: VGLL3
product: vestigial like family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_046648077.1
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(2949184..2949824,2961748..2962015,2977078..2977602,2997811..3003930)
location: region:2949184-3003930:1
so has part: feature:2949184-2949824:1:exon
so has part: feature:2961748-2962015:1:exon
so has part: feature:2977078-2977602:1:exon
so has part: feature:2997811-3003930:1:exon

position:2949184:1
position: 2949184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949184-2949824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2961748-2962015:1:exon

position:2961748:1
position: 2961748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2977078-2977602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2997811-3003930:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: VGLL3
product: vestigial like family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_046648079.1
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(2949185..2949824,2961898..2962015,2977078..2977602,2997811..3003930)
location: region:2949185-3003930:1
so has part: feature:2949185-2949824:1:exon
so has part: feature:2961898-2962015:1:exon
so has part: feature:2977078-2977602:1:exon
so has part: feature:2997811-3003930:1:exon

position:2949185:1
position: 2949185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949185-2949824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2961898-2962015:1:exon

position:2961898:1
position: 2961898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2977078-2977602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2997811-3003930:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X1
translation: MSCAEVMYHPQPYGAPQYLPNPVAAATCPTACYHPAPQPGQQKKLAVYSKMQDSLEVTLPSKQEEEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQASTLHPESAISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQSPPAPCLGGVHPDFQVTAPPGTFTAADPNPWPGHGLHQTGPAPPPPVSESWHYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHPPAGSALDPSYGPLLMPSVRAARIPAPQCDVAKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWY
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(2949699..2949824,2961748..2962015,2977078..2977602,2997811..2997854)
location: region:2949699-2997854:1
so has part: feature:2949699-2949824:1:exon
so has part: feature:2961748-2962015:1:exon
so has part: feature:2977078-2977602:1:exon
so has part: feature:2997811-2997854:1:exon

XP_046504033.1
type: Protein
SIO_000068: ncbiprotein

position:2949699:1
position: 2949699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2997854:1
position: 2997854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949699-2949824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2961748-2962015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2977078-2977602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2997811-2997854:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X2
translation: MSCAEVMYHPQPYGAPQYLPNPVAAATCPTACYHPAPQPGQQKLAVYSKMQDSLEVTLPSKQEEEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQASTLHPESAISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQSPPAPCLGGVHPDFQVTAPPGTFTAADPNPWPGHGLHQTGPAPPPPVSESWHYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHPPAGSALDPSYGPLLMPSVRAARIPAPQCDVAKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWY
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(2949699..2949824,2961751..2962015,2977078..2977602,2997811..2997854)
location: region:2949699-2997854:1
so has part: feature:2949699-2949824:1:exon
so has part: feature:2961751-2962015:1:exon
so has part: feature:2977078-2977602:1:exon
so has part: feature:2997811-2997854:1:exon

XP_046504034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2949699-2949824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2961751-2962015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2977078-2977602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2997811-2997854:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X3
translation: MSCAEVMYHPQPYGAPQYLPNPVAAATCPTACYHPAPQPGQQGDIGSVVDEHFSRALGQASTLHPESAISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQSPPAPCLGGVHPDFQVTAPPGTFTAADPNPWPGHGLHQTGPAPPPPVSESWHYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHPPAGSALDPSYGPLLMPSVRAARIPAPQCDVAKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWY
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(2949699..2949824,2961898..2962015,2977078..2977602,2997811..2997854)
location: region:2949699-2997854:1
so has part: feature:2949699-2949824:1:exon
so has part: feature:2961898-2962015:1:exon
so has part: feature:2977078-2977602:1:exon
so has part: feature:2997811-2997854:1:exon

XP_046504035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2949699-2949824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2961898-2962015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2977078-2977602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2997811-2997854:1:exon

LOC124231577
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231577
note: uncharacterized LOC124231577; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(3295660..3295782)
location: region:3295660-3295782:-1
so has part: feature:3295660-3295782:-1:exon

124231577
type: Gene
SIO_000068: ncbigene

position:3295660:-1
position: 3295660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3295782:-1
position: 3295782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3295660-3295782:-1:exon

LOC124231577
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231577
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC124231577
subclass of: SO_0000673
so part of: LOC124231577
location: complement(3295660..3295782)
location: region:3295660-3295782:-1
so has part: feature:3295660-3295782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3295660-3295782:-1:exon

CADM2
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: CADM2
note: cell adhesion molecule 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3792827..4021271)
location: region:3792827-4021271:-1
so has part: feature:3792827-4021271:-1:exon
subclass of: SO_0000010

124231481
type: Gene
SIO_000068: ncbigene

position:3792827:-1
position: 3792827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021271:-1
position: 4021271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3792827-4021271:-1:exon

CADM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CADM2
product: cell adhesion molecule 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_046648286.1
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(3792827..3792971,3793772..3793897,3882615..3882793,3904960..3905050,3929270..3929440,3944048..3944185,3946422..3946574,4017287..4017436,4021232..4021271))
location: region:3792827-4021271:-1
so has part: feature:4021232-4021271:-1:exon
so has part: feature:4017287-4017436:-1:exon
so has part: feature:3946422-3946574:-1:exon
so has part: feature:3944048-3944185:-1:exon
so has part: feature:3929270-3929440:-1:exon
so has part: feature:3904960-3905050:-1:exon
so has part: feature:3882615-3882793:-1:exon
so has part: feature:3793772-3793897:-1:exon
so has part: feature:3792827-3792971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4021232-4021271:-1:exon

position:4021232:-1
position: 4021232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4017287-4017436:-1:exon

position:4017287:-1
position: 4017287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017436:-1
position: 4017436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3946422-3946574:-1:exon

position:3946422:-1
position: 3946422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3946574:-1
position: 3946574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3944048-3944185:-1:exon

position:3944048:-1
position: 3944048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3944185:-1
position: 3944185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3929270-3929440:-1:exon

position:3929270:-1
position: 3929270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3929440:-1
position: 3929440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3904960-3905050:-1:exon

position:3904960:-1
position: 3904960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3905050:-1
position: 3905050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3882615-3882793:-1:exon

position:3882615:-1
position: 3882615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3882793:-1
position: 3882793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3793772-3793897:-1:exon

position:3793772:-1
position: 3793772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3793897:-1
position: 3793897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3792827-3792971:-1:exon

position:3792971:-1
position: 3792971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 2
translation: MAVYAREVGPGREGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHEALNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDPNALAGQTGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(3792853..3792971,3793772..3793897,3882615..3882793,3904960..3905050,3929270..3929440,3944048..3944185,3946422..3946574,4017287..4017436,4021232..4021271))
location: region:3792853-4021271:-1
so has part: feature:4021232-4021271:-1:exon
so has part: feature:4017287-4017436:-1:exon
so has part: feature:3946422-3946574:-1:exon
so has part: feature:3944048-3944185:-1:exon
so has part: feature:3929270-3929440:-1:exon
so has part: feature:3904960-3905050:-1:exon
so has part: feature:3882615-3882793:-1:exon
so has part: feature:3793772-3793897:-1:exon
so has part: feature:3792853-3792971:-1:exon

XP_046504242.1
type: Protein
SIO_000068: ncbiprotein

position:3792853:-1
position: 3792853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4021232-4021271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4017287-4017436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3946422-3946574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3944048-3944185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3929270-3929440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3904960-3905050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3882615-3882793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3793772-3793897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3792853-3792971:-1:exon

LOC124231520
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231520
note: serine/arginine repetitive matrix protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5683647..5696745)
location: region:5683647-5696745:-1
so has part: feature:5683647-5696745:-1:exon

124231520
type: Gene
SIO_000068: ncbigene

position:5683647:-1
position: 5683647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5696745:-1
position: 5696745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5683647-5696745:-1:exon

LOC124231520
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC124231520
subclass of: SO_0000673
so part of: LOC124231520
location: complement(5683647..5684826)
location: region:5683647-5684826:-1
so has part: feature:5683647-5684826:-1:exon

position:5684826:-1
position: 5684826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5683647-5684826:-1:exon

LOC124231520
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC124231520
subclass of: SO_0000673
so part of: LOC124231520
location: complement(5684967..5685166)
location: region:5684967-5685166:-1
so has part: feature:5684967-5685166:-1:exon

position:5684967:-1
position: 5684967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5685166:-1
position: 5685166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5684967-5685166:-1:exon

LOC124231520
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC124231520
subclass of: SO_0000673
so part of: LOC124231520
location: complement(5685242..5685689)
location: region:5685242-5685689:-1
so has part: feature:5685242-5685689:-1:exon

position:5685242:-1
position: 5685242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5685689:-1
position: 5685689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5685242-5685689:-1:exon

LOC124231520
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC124231520
subclass of: SO_0000673
so part of: LOC124231520
location: complement(5696720..5696745)
location: region:5696720-5696745:-1
so has part: feature:5696720-5696745:-1:exon

position:5696720:-1
position: 5696720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5696720-5696745:-1:exon

LOC124231444
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231444
note: uncharacterized LOC124231444; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7459743..7464898)
location: region:7459743-7464898:-1
so has part: feature:7459743-7464898:-1:exon
subclass of: SO_0000011

124231444
type: Gene
SIO_000068: ncbigene

position:7459743:-1
position: 7459743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7464898:-1
position: 7464898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7459743-7464898:-1:exon

LOC124231444
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231444
product: uncharacterized LOC124231444
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886526.1
SIO_010081: LOC124231444
subclass of: SO_0000673
so part of: LOC124231444
location: complement(join(7459743..7460136,7463489..7463536,7464840..7464898))
location: region:7459743-7464898:-1
so has part: feature:7464840-7464898:-1:exon
so has part: feature:7463489-7463536:-1:exon
so has part: feature:7459743-7460136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7464840-7464898:-1:exon

position:7464840:-1
position: 7464840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7463489-7463536:-1:exon

position:7463489:-1
position: 7463489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7463536:-1
position: 7463536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7459743-7460136:-1:exon

position:7460136:-1
position: 7460136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124231443
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231443
note: uncharacterized LOC124231443; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7540499..7581871)
location: region:7540499-7581871:-1
so has part: feature:7540499-7581871:-1:exon
subclass of: SO_0000011

124231443
type: Gene
SIO_000068: ncbigene

position:7540499:-1
position: 7540499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7581871:-1
position: 7581871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7540499-7581871:-1:exon

LOC124231443
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231443
product: uncharacterized LOC124231443, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886524.1
SIO_010081: LOC124231443
subclass of: SO_0000673
so part of: LOC124231443
location: complement(join(7540499..7541915,7542292..7542395,7579941..7580163,7581829..7581871))
location: region:7540499-7581871:-1
so has part: feature:7581829-7581871:-1:exon
so has part: feature:7579941-7580163:-1:exon
so has part: feature:7542292-7542395:-1:exon
so has part: feature:7540499-7541915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7581829-7581871:-1:exon

position:7581829:-1
position: 7581829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7579941-7580163:-1:exon

position:7579941:-1
position: 7579941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7580163:-1
position: 7580163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7542292-7542395:-1:exon

position:7542292:-1
position: 7542292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7542395:-1
position: 7542395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7540499-7541915:-1:exon

position:7541915:-1
position: 7541915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124231443
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231443
product: uncharacterized LOC124231443, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886525.1
SIO_010081: LOC124231443
subclass of: SO_0000673
so part of: LOC124231443
location: complement(join(7540499..7541915,7542292..7542395,7579941..7580163,7581822..7581855))
location: region:7540499-7581855:-1
so has part: feature:7581822-7581855:-1:exon
so has part: feature:7579941-7580163:-1:exon
so has part: feature:7542292-7542395:-1:exon
so has part: feature:7540499-7541915:-1:exon

position:7581855:-1
position: 7581855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7581822-7581855:-1:exon

position:7581822:-1
position: 7581822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7579941-7580163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7542292-7542395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7540499-7541915:-1:exon

GBE1
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: GBE1
note: 1,4-alpha-glucan branching enzyme 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7619671..7866485
location: region:7619671-7866485:1
so has part: feature:7619671-7866485:1:exon
subclass of: SO_0000010

124231305
type: Gene
SIO_000068: ncbigene

position:7619671:1
position: 7619671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7866485:1
position: 7866485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7619671-7866485:1:exon

GBE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: GBE1
product: 1,4-alpha-glucan branching enzyme 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648014.1
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(7619671..7619928,7667191..7667360,7701425..7701540,7737318..7737443,7738272..7738407,7740688..7740778,7744160..7744369,7783909..7784024,7786175..7786302,7791379..7791477,7797305..7797415,7800140..7800311,7833535..7833719,7835325..7835455,7856712..7856829,7864641..7866485)
location: region:7619671-7866485:1
so has part: feature:7619671-7619928:1:exon
so has part: feature:7667191-7667360:1:exon
so has part: feature:7701425-7701540:1:exon
so has part: feature:7737318-7737443:1:exon
so has part: feature:7738272-7738407:1:exon
so has part: feature:7740688-7740778:1:exon
so has part: feature:7744160-7744369:1:exon
so has part: feature:7783909-7784024:1:exon
so has part: feature:7786175-7786302:1:exon
so has part: feature:7791379-7791477:1:exon
so has part: feature:7797305-7797415:1:exon
so has part: feature:7800140-7800311:1:exon
so has part: feature:7833535-7833719:1:exon
so has part: feature:7835325-7835455:1:exon
so has part: feature:7856712-7856829:1:exon
so has part: feature:7864641-7866485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7619671-7619928:1:exon

position:7619928:1
position: 7619928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7667191-7667360:1:exon

position:7667191:1
position: 7667191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7667360:1
position: 7667360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7701425-7701540:1:exon

position:7701425:1
position: 7701425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7701540:1
position: 7701540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7737318-7737443:1:exon

position:7737318:1
position: 7737318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7737443:1
position: 7737443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7738272-7738407:1:exon

position:7738272:1
position: 7738272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7738407:1
position: 7738407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7740688-7740778:1:exon

position:7740688:1
position: 7740688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7740778:1
position: 7740778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7744160-7744369:1:exon

position:7744160:1
position: 7744160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7744369:1
position: 7744369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7783909-7784024:1:exon

position:7783909:1
position: 7783909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7784024:1
position: 7784024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7786175-7786302:1:exon

position:7786175:1
position: 7786175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7786302:1
position: 7786302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7791379-7791477:1:exon

position:7791379:1
position: 7791379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7791477:1
position: 7791477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7797305-7797415:1:exon

position:7797305:1
position: 7797305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7797415:1
position: 7797415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7800140-7800311:1:exon

position:7800140:1
position: 7800140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7800311:1
position: 7800311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7833535-7833719:1:exon

position:7833535:1
position: 7833535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7833719:1
position: 7833719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7835325-7835455:1:exon

position:7835325:1
position: 7835325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7835455:1
position: 7835455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7856712-7856829:1:exon

position:7856712:1
position: 7856712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7856829:1
position: 7856829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7864641-7866485:1:exon

position:7864641:1
position: 7864641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GBE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: GBE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1,4-alpha-glucan-branching enzyme isoform X1
translation: MAAPAARADGSDAALAAALADVPDLGRLLEVDPYLKPYAPDFQRRYNRFSQTLDNIGKNEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNDWNPFSYPYKKLDYGKWDLYIPPKPNKSLLVPHGSKLKVVIRSKSGEILYRISPWAKYVVRESGNVNYDWIHWDPEQPYKFKHSRPKKPRSLRIYESHVGISSHEGKIASYKHFTCNVLPRIKGLGYNCIQMMAIMEHAYYASFGYQITSFFAASSRYGTPEELKELVDTAHSMGITVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGTHDLWDSRLFIYSSWEVLRFLLSNIRWWLEEYGFDGFRFDGVTSMLYHHHGIGASFSGDYHEYFGLQVDEDALTYLMLANHLVHTLYPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLVKEFKDEDWNMGNIVYTLTNRRHLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHALGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNKLEERCGWLSAPQAFVSEKHEGNKVIAFERAALLFIFNFHPSKSYTNYRVGTTLPGKFKIVLDSDAAEYGGHQRLDHNTDFFSEPYEHNERPSSLLVYIPSRVALILQNVDPPN
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(7619795..7619928,7667191..7667360,7701425..7701540,7737318..7737443,7738272..7738407,7740688..7740778,7744160..7744369,7783909..7784024,7786175..7786302,7791379..7791477,7797305..7797415,7800140..7800311,7833535..7833719,7835325..7835455,7856712..7856829,7864641..7864697)
location: region:7619795-7864697:1
so has part: feature:7619795-7619928:1:exon
so has part: feature:7667191-7667360:1:exon
so has part: feature:7701425-7701540:1:exon
so has part: feature:7737318-7737443:1:exon
so has part: feature:7738272-7738407:1:exon
so has part: feature:7740688-7740778:1:exon
so has part: feature:7744160-7744369:1:exon
so has part: feature:7783909-7784024:1:exon
so has part: feature:7786175-7786302:1:exon
so has part: feature:7791379-7791477:1:exon
so has part: feature:7797305-7797415:1:exon
so has part: feature:7800140-7800311:1:exon
so has part: feature:7833535-7833719:1:exon
so has part: feature:7835325-7835455:1:exon
so has part: feature:7856712-7856829:1:exon
so has part: feature:7864641-7864697:1:exon

XP_046503970.1
type: Protein
SIO_000068: ncbiprotein

position:7619795:1
position: 7619795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7864697:1
position: 7864697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7619795-7619928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7667191-7667360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7701425-7701540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7737318-7737443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7738272-7738407:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7740688-7740778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7744160-7744369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7783909-7784024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7786175-7786302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7791379-7791477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7797305-7797415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7800140-7800311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7833535-7833719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7835325-7835455:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7856712-7856829:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7864641-7864697:1:exon

GBE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: GBE1
product: 1,4-alpha-glucan branching enzyme 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648015.1
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(7619798..7619928,7667191..7667360,7677710..7677785,7701425..7701540,7737318..7737443,7738272..7738407,7740688..7740778,7744160..7744369,7783909..7784024,7786175..7786302,7791379..7791477,7797305..7797415,7800140..7800311,7833535..7833719,7835325..7835455,7856712..7856829,7864641..7866485)
location: region:7619798-7866485:1
so has part: feature:7619798-7619928:1:exon
so has part: feature:7667191-7667360:1:exon
so has part: feature:7677710-7677785:1:exon
so has part: feature:7701425-7701540:1:exon
so has part: feature:7737318-7737443:1:exon
so has part: feature:7738272-7738407:1:exon
so has part: feature:7740688-7740778:1:exon
so has part: feature:7744160-7744369:1:exon
so has part: feature:7783909-7784024:1:exon
so has part: feature:7786175-7786302:1:exon
so has part: feature:7791379-7791477:1:exon
so has part: feature:7797305-7797415:1:exon
so has part: feature:7800140-7800311:1:exon
so has part: feature:7833535-7833719:1:exon
so has part: feature:7835325-7835455:1:exon
so has part: feature:7856712-7856829:1:exon
so has part: feature:7864641-7866485:1:exon

position:7619798:1
position: 7619798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7619798-7619928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7667191-7667360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7677710-7677785:1:exon

position:7677710:1
position: 7677710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7677785:1
position: 7677785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7701425-7701540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7737318-7737443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7738272-7738407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7740688-7740778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7744160-7744369:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7783909-7784024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7786175-7786302:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7791379-7791477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7797305-7797415:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7800140-7800311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7833535-7833719:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7835325-7835455:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7856712-7856829:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7864641-7866485:1:exon

GBE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: GBE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1,4-alpha-glucan-branching enzyme isoform X2
translation: MKVVLTSFPEVMNHLASTDVLTGAYTAKSGPREQKEFFLLETSENLLERKKNTYLLGENQMDSSLMVGDDWNPFSYPYKKLDYGKWDLYIPPKPNKSLLVPHGSKLKVVIRSKSGEILYRISPWAKYVVRESGNVNYDWIHWDPEQPYKFKHSRPKKPRSLRIYESHVGISSHEGKIASYKHFTCNVLPRIKGLGYNCIQMMAIMEHAYYASFGYQITSFFAASSRYGTPEELKELVDTAHSMGITVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGTHDLWDSRLFIYSSWEVLRFLLSNIRWWLEEYGFDGFRFDGVTSMLYHHHGIGASFSGDYHEYFGLQVDEDALTYLMLANHLVHTLYPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLVKEFKDEDWNMGNIVYTLTNRRHLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHALGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNKLEERCGWLSAPQAFVSEKHEGNKVIAFERAALLFIFNFHPSKSYTNYRVGTTLPGKFKIVLDSDAAEYGGHQRLDHNTDFFSEPYEHNERPSSLLVYIPSRVALILQNVDPPN
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(7667232..7667360,7677710..7677785,7701425..7701540,7737318..7737443,7738272..7738407,7740688..7740778,7744160..7744369,7783909..7784024,7786175..7786302,7791379..7791477,7797305..7797415,7800140..7800311,7833535..7833719,7835325..7835455,7856712..7856829,7864641..7864697)
location: region:7667232-7864697:1
so has part: feature:7667232-7667360:1:exon
so has part: feature:7677710-7677785:1:exon
so has part: feature:7701425-7701540:1:exon
so has part: feature:7737318-7737443:1:exon
so has part: feature:7738272-7738407:1:exon
so has part: feature:7740688-7740778:1:exon
so has part: feature:7744160-7744369:1:exon
so has part: feature:7783909-7784024:1:exon
so has part: feature:7786175-7786302:1:exon
so has part: feature:7791379-7791477:1:exon
so has part: feature:7797305-7797415:1:exon
so has part: feature:7800140-7800311:1:exon
so has part: feature:7833535-7833719:1:exon
so has part: feature:7835325-7835455:1:exon
so has part: feature:7856712-7856829:1:exon
so has part: feature:7864641-7864697:1:exon

XP_046503971.1
type: Protein
SIO_000068: ncbiprotein

position:7667232:1
position: 7667232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7667232-7667360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7677710-7677785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7701425-7701540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7737318-7737443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7738272-7738407:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7740688-7740778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7744160-7744369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7783909-7784024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7786175-7786302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7791379-7791477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7797305-7797415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7800140-7800311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7833535-7833719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7835325-7835455:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7856712-7856829:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7864641-7864697:1:exon

LOC124231289
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231289
note: uncharacterized LOC124231289; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8720363..8737560
location: region:8720363-8737560:1
so has part: feature:8720363-8737560:1:exon
subclass of: SO_0000011

124231289
type: Gene
SIO_000068: ncbigene

position:8720363:1
position: 8720363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8737560:1
position: 8737560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8720363-8737560:1:exon

LOC124231289
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231289
product: uncharacterized LOC124231289
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886481.1
SIO_010081: LOC124231289
subclass of: SO_0000673
so part of: LOC124231289
location: join(8720363..8720494,8733272..8733376,8737230..8737560)
location: region:8720363-8737560:1
so has part: feature:8720363-8720494:1:exon
so has part: feature:8733272-8733376:1:exon
so has part: feature:8737230-8737560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8720363-8720494:1:exon

position:8720494:1
position: 8720494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8733272-8733376:1:exon

position:8733272:1
position: 8733272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8733376:1
position: 8733376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8737230-8737560:1:exon

position:8737230:1
position: 8737230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124231521
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231521
note: 40S ribosomal protein SA-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9822898..9823871
location: region:9822898-9823871:1
so has part: feature:9822898-9823871:1:exon

124231521
type: Gene
SIO_000068: ncbigene

position:9822898:1
position: 9822898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9823871:1
position: 9823871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9822898-9823871:1:exon

LOC124231521
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231521
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
pseudo: true
SIO_010081: LOC124231521
subclass of: SO_0000673
so part of: LOC124231521
location: 9822898..9823871
location: region:9822898-9823871:1
so has part: feature:9822898-9823871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9822898-9823871:1:exon

ROBO1
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: ROBO1
note: roundabout guidance receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9989128..10369437
location: region:9989128-10369437:1
so has part: feature:9989128-10369437:1:exon
subclass of: SO_0000010

124231324
type: Gene
SIO_000068: ncbigene

position:9989128:1
position: 9989128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10369437:1
position: 10369437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9989128-10369437:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648052.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(9989128..9989593,10058783..10059109,10231845..10232002,10258785..10258905,10259257..10259395,10261445..10261572,10281935..10281943,10286483..10286607,10289230..10289401,10297200..10297405,10298915..10298996,10299172..10299340,10299424..10299590,10305022..10305143,10306079..10306310,10307255..10307376,10311701..10311872,10315567..10315764,10319863..10319889,10321303..10321345,10328047..10328201,10330743..10331078,10332917..10333024,10335702..10335846,10339535..10339783,10349397..10349803,10352803..10352955,10360454..10360762,10366333..10366529,10367764..10369437)
location: region:9989128-10369437:1
so has part: feature:9989128-9989593:1:exon
so has part: feature:10058783-10059109:1:exon
so has part: feature:10231845-10232002:1:exon
so has part: feature:10258785-10258905:1:exon
so has part: feature:10259257-10259395:1:exon
so has part: feature:10261445-10261572:1:exon
so has part: feature:10281935-10281943:1:exon
so has part: feature:10286483-10286607:1:exon
so has part: feature:10289230-10289401:1:exon
so has part: feature:10297200-10297405:1:exon
so has part: feature:10298915-10298996:1:exon
so has part: feature:10299172-10299340:1:exon
so has part: feature:10299424-10299590:1:exon
so has part: feature:10305022-10305143:1:exon
so has part: feature:10306079-10306310:1:exon
so has part: feature:10307255-10307376:1:exon
so has part: feature:10311701-10311872:1:exon
so has part: feature:10315567-10315764:1:exon
so has part: feature:10319863-10319889:1:exon
so has part: feature:10321303-10321345:1:exon
so has part: feature:10328047-10328201:1:exon
so has part: feature:10330743-10331078:1:exon
so has part: feature:10332917-10333024:1:exon
so has part: feature:10335702-10335846:1:exon
so has part: feature:10339535-10339783:1:exon
so has part: feature:10349397-10349803:1:exon
so has part: feature:10352803-10352955:1:exon
so has part: feature:10360454-10360762:1:exon
so has part: feature:10366333-10366529:1:exon
so has part: feature:10367764-10369437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9989128-9989593:1:exon

position:9989593:1
position: 9989593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10058783-10059109:1:exon

position:10058783:1
position: 10058783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10059109:1
position: 10059109
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:10231845-10232002:1:exon

position:10231845:1
position: 10231845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10232002:1
position: 10232002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10258785-10258905:1:exon

position:10258785:1
position: 10258785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10258905:1
position: 10258905
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:10259257-10259395:1:exon

position:10259257:1
position: 10259257
reference: sequence
type: ForwardStrandPosition
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position:10259395:1
position: 10259395
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:10261445-10261572:1:exon

position:10261445:1
position: 10261445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10261572:1
position: 10261572
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:10281935-10281943:1:exon

position:10281935:1
position: 10281935
reference: sequence
type: ForwardStrandPosition
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position:10281943:1
position: 10281943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10286483-10286607:1:exon

position:10286483:1
position: 10286483
reference: sequence
type: ForwardStrandPosition
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position:10286607:1
position: 10286607
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:10289230-10289401:1:exon

position:10289230:1
position: 10289230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10289401:1
position: 10289401
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:10297200-10297405:1:exon

position:10297200:1
position: 10297200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10297405:1
position: 10297405
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:10298915-10298996:1:exon

position:10298915:1
position: 10298915
reference: sequence
type: ForwardStrandPosition
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position:10298996:1
position: 10298996
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:10299172-10299340:1:exon

position:10299172:1
position: 10299172
reference: sequence
type: ForwardStrandPosition
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position:10299340:1
position: 10299340
reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:10299424-10299590:1:exon

position:10299424:1
position: 10299424
reference: sequence
type: ForwardStrandPosition
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position:10299590:1
position: 10299590
reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:10305022-10305143:1:exon

position:10305022:1
position: 10305022
reference: sequence
type: ForwardStrandPosition
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position:10305143:1
position: 10305143
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:10306079-10306310:1:exon

position:10306079:1
position: 10306079
reference: sequence
type: ForwardStrandPosition
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position:10306310:1
position: 10306310
reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:10307255-10307376:1:exon

position:10307255:1
position: 10307255
reference: sequence
type: ForwardStrandPosition
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position:10307376:1
position: 10307376
reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:10311701-10311872:1:exon

position:10311701:1
position: 10311701
reference: sequence
type: ForwardStrandPosition
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position:10311872:1
position: 10311872
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:10315567-10315764:1:exon

position:10315567:1
position: 10315567
reference: sequence
type: ForwardStrandPosition
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position:10315764:1
position: 10315764
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:10319863-10319889:1:exon

position:10319863:1
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reference: sequence
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position:10319889:1
position: 10319889
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type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:10321303-10321345:1:exon

position:10321303:1
position: 10321303
reference: sequence
type: ForwardStrandPosition
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position:10321345:1
position: 10321345
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urn:…
SIO_000300: 21
SIO_000628: feature:10328047-10328201:1:exon

position:10328047:1
position: 10328047
reference: sequence
type: ForwardStrandPosition
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position:10328201:1
position: 10328201
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:10330743-10331078:1:exon

position:10330743:1
position: 10330743
reference: sequence
type: ForwardStrandPosition
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position:10331078:1
position: 10331078
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:10332917-10333024:1:exon

position:10332917:1
position: 10332917
reference: sequence
type: ForwardStrandPosition
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position:10333024:1
position: 10333024
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:10335702-10335846:1:exon

position:10335702:1
position: 10335702
reference: sequence
type: ForwardStrandPosition
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position:10335846:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:10339535-10339783:1:exon

position:10339535:1
position: 10339535
reference: sequence
type: ForwardStrandPosition
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position:10339783:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:10349397-10349803:1:exon

position:10349397:1
position: 10349397
reference: sequence
type: ForwardStrandPosition
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position:10349803:1
position: 10349803
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:10352803-10352955:1:exon

position:10352803:1
position: 10352803
reference: sequence
type: ForwardStrandPosition
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position:10352955:1
position: 10352955
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:10360454-10360762:1:exon

position:10360454:1
position: 10360454
reference: sequence
type: ForwardStrandPosition
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position:10360762:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:10366333-10366529:1:exon

position:10366333:1
position: 10366333
reference: sequence
type: ForwardStrandPosition
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position:10366529:1
position: 10366529
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:10367764-10369437:1:exon

position:10367764:1
position: 10367764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648054.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(9989128..9989593,10058783..10059109,10231845..10232002,10258785..10258905,10259257..10259395,10261445..10261572,10281935..10281943,10286483..10286607,10289230..10289401,10297200..10297405,10298915..10298996,10299172..10299340,10299424..10299590,10305022..10305143,10306079..10306310,10307255..10307376,10311701..10311872,10315567..10315764,10319863..10319889,10321303..10321345,10328047..10328201,10330908..10331078,10332917..10333024,10335702..10335846,10339535..10339783,10349397..10349803,10352803..10352955,10360454..10360762,10366333..10366529,10367764..10369437)
location: region:9989128-10369437:1
so has part: feature:9989128-9989593:1:exon
so has part: feature:10058783-10059109:1:exon
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so has part: feature:10261445-10261572:1:exon
so has part: feature:10281935-10281943:1:exon
so has part: feature:10286483-10286607:1:exon
so has part: feature:10289230-10289401:1:exon
so has part: feature:10297200-10297405:1:exon
so has part: feature:10298915-10298996:1:exon
so has part: feature:10299172-10299340:1:exon
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so has part: feature:10305022-10305143:1:exon
so has part: feature:10306079-10306310:1:exon
so has part: feature:10307255-10307376:1:exon
so has part: feature:10311701-10311872:1:exon
so has part: feature:10315567-10315764:1:exon
so has part: feature:10319863-10319889:1:exon
so has part: feature:10321303-10321345:1:exon
so has part: feature:10328047-10328201:1:exon
so has part: feature:10330908-10331078:1:exon
so has part: feature:10332917-10333024:1:exon
so has part: feature:10335702-10335846:1:exon
so has part: feature:10339535-10339783:1:exon
so has part: feature:10349397-10349803:1:exon
so has part: feature:10352803-10352955:1:exon
so has part: feature:10360454-10360762:1:exon
so has part: feature:10366333-10366529:1:exon
so has part: feature:10367764-10369437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9989128-9989593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10058783-10059109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10231845-10232002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10258785-10258905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10259257-10259395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10261445-10261572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10281935-10281943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10286483-10286607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10289230-10289401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10297200-10297405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10298915-10298996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10299172-10299340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10299424-10299590:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10305022-10305143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10306079-10306310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10307255-10307376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10311701-10311872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10315567-10315764:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10319863-10319889:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10321303-10321345:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10328047-10328201:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10330908-10331078:1:exon

position:10330908:1
position: 10330908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:10332917-10333024:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10335702-10335846:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10339535-10339783:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10349397-10349803:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10352803-10352955:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10360454-10360762:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10366333-10366529:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:10367764-10369437:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648053.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(9989128..9989593,10058783..10059109,10231845..10232002,10258785..10258905,10259257..10259395,10261445..10261572,10281935..10281943,10286483..10286607,10289230..10289401,10297200..10297405,10298915..10298996,10299172..10299340,10299424..10299590,10305022..10305143,10306079..10306310,10307255..10307376,10311701..10311872,10315567..10315764,10321303..10321345,10328047..10328201,10330743..10331078,10332917..10333024,10335702..10335846,10339535..10339783,10349397..10349803,10352803..10352955,10360454..10360762,10366333..10366529,10367764..10369437)
location: region:9989128-10369437:1
so has part: feature:9989128-9989593:1:exon
so has part: feature:10058783-10059109:1:exon
so has part: feature:10231845-10232002:1:exon
so has part: feature:10258785-10258905:1:exon
so has part: feature:10259257-10259395:1:exon
so has part: feature:10261445-10261572:1:exon
so has part: feature:10281935-10281943:1:exon
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so has part: feature:10289230-10289401:1:exon
so has part: feature:10297200-10297405:1:exon
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so has part: feature:10305022-10305143:1:exon
so has part: feature:10306079-10306310:1:exon
so has part: feature:10307255-10307376:1:exon
so has part: feature:10311701-10311872:1:exon
so has part: feature:10315567-10315764:1:exon
so has part: feature:10321303-10321345:1:exon
so has part: feature:10328047-10328201:1:exon
so has part: feature:10330743-10331078:1:exon
so has part: feature:10332917-10333024:1:exon
so has part: feature:10335702-10335846:1:exon
so has part: feature:10339535-10339783:1:exon
so has part: feature:10349397-10349803:1:exon
so has part: feature:10352803-10352955:1:exon
so has part: feature:10360454-10360762:1:exon
so has part: feature:10366333-10366529:1:exon
so has part: feature:10367764-10369437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9989128-9989593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10058783-10059109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10231845-10232002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10258785-10258905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10259257-10259395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10261445-10261572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10281935-10281943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10286483-10286607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10289230-10289401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10297200-10297405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10298915-10298996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10299172-10299340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10299424-10299590:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10305022-10305143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10306079-10306310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10307255-10307376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10311701-10311872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10315567-10315764:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10321303-10321345:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10328047-10328201:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10330743-10331078:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10332917-10333024:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10335702-10335846:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10339535-10339783:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10349397-10349803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10352803-10352955:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10360454-10360762:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10366333-10366529:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10367764-10369437:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648055.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(9989128..9989593,10058783..10059109,10231845..10232002,10258785..10258905,10259257..10259395,10261445..10261572,10281935..10281943,10286483..10286607,10289230..10289401,10297200..10297405,10298915..10298996,10299172..10299340,10299424..10299590,10305022..10305143,10306079..10306310,10307255..10307376,10311701..10311872,10315567..10315764,10321303..10321345,10328047..10328201,10330908..10331078,10332917..10333024,10335702..10335846,10339535..10339783,10349397..10349803,10352803..10352955,10360454..10360762,10366333..10366529,10367764..10369437)
location: region:9989128-10369437:1
so has part: feature:9989128-9989593:1:exon
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so has part: feature:10298915-10298996:1:exon
so has part: feature:10299172-10299340:1:exon
so has part: feature:10299424-10299590:1:exon
so has part: feature:10305022-10305143:1:exon
so has part: feature:10306079-10306310:1:exon
so has part: feature:10307255-10307376:1:exon
so has part: feature:10311701-10311872:1:exon
so has part: feature:10315567-10315764:1:exon
so has part: feature:10321303-10321345:1:exon
so has part: feature:10328047-10328201:1:exon
so has part: feature:10330908-10331078:1:exon
so has part: feature:10332917-10333024:1:exon
so has part: feature:10335702-10335846:1:exon
so has part: feature:10339535-10339783:1:exon
so has part: feature:10349397-10349803:1:exon
so has part: feature:10352803-10352955:1:exon
so has part: feature:10360454-10360762:1:exon
so has part: feature:10366333-10366529:1:exon
so has part: feature:10367764-10369437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9989128-9989593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10058783-10059109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10231845-10232002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10258785-10258905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10259257-10259395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10261445-10261572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10281935-10281943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10286483-10286607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10289230-10289401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10297200-10297405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10298915-10298996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10299172-10299340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10299424-10299590:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10305022-10305143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10306079-10306310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10307255-10307376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10311701-10311872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10315567-10315764:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10321303-10321345:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10328047-10328201:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10330908-10331078:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10332917-10333024:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10335702-10335846:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10339535-10339783:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10349397-10349803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10352803-10352955:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10360454-10360762:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10366333-10366529:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10367764-10369437:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X1
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAASSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCAAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSGEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYGISVDDSYDQEMPCPVPPARMYLQQDELEEDEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHVQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHTAQCPRPTSPVSTDSNMSAAVMQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVSKLPSIEARTDRSSDRKGGSYKGREVLDGRQVADMRTNPGDTREAQEQQNDGKGRGNKATKRDPPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQILGGYERGEENNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(9989539..9989593,10058783..10059109,10231845..10232002,10258785..10258905,10259257..10259395,10261445..10261572,10281935..10281943,10286483..10286607,10289230..10289401,10297200..10297405,10298915..10298996,10299172..10299340,10299424..10299590,10305022..10305143,10306079..10306310,10307255..10307376,10311701..10311872,10315567..10315764,10319863..10319889,10321303..10321345,10328047..10328201,10330743..10331078,10332917..10333024,10335702..10335846,10339535..10339783,10349397..10349803,10352803..10352955,10360454..10360762,10366333..10366529,10367764..10367778)
location: region:9989539-10367778:1
so has part: feature:9989539-9989593:1:exon
so has part: feature:10058783-10059109:1:exon
so has part: feature:10231845-10232002:1:exon
so has part: feature:10258785-10258905:1:exon
so has part: feature:10259257-10259395:1:exon
so has part: feature:10261445-10261572:1:exon
so has part: feature:10281935-10281943:1:exon
so has part: feature:10286483-10286607:1:exon
so has part: feature:10289230-10289401:1:exon
so has part: feature:10297200-10297405:1:exon
so has part: feature:10298915-10298996:1:exon
so has part: feature:10299172-10299340:1:exon
so has part: feature:10299424-10299590:1:exon
so has part: feature:10305022-10305143:1:exon
so has part: feature:10306079-10306310:1:exon
so has part: feature:10307255-10307376:1:exon
so has part: feature:10311701-10311872:1:exon
so has part: feature:10315567-10315764:1:exon
so has part: feature:10319863-10319889:1:exon
so has part: feature:10321303-10321345:1:exon
so has part: feature:10328047-10328201:1:exon
so has part: feature:10330743-10331078:1:exon
so has part: feature:10332917-10333024:1:exon
so has part: feature:10335702-10335846:1:exon
so has part: feature:10339535-10339783:1:exon
so has part: feature:10349397-10349803:1:exon
so has part: feature:10352803-10352955:1:exon
so has part: feature:10360454-10360762:1:exon
so has part: feature:10366333-10366529:1:exon
so has part: feature:10367764-10367778:1:exon

XP_046504008.1
type: Protein
SIO_000068: ncbiprotein

position:9989539:1
position: 9989539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10367778:1
position: 10367778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9989539-9989593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10058783-10059109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10231845-10232002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10258785-10258905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10259257-10259395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10261445-10261572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10281935-10281943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10286483-10286607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10289230-10289401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10297200-10297405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10298915-10298996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10299172-10299340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10299424-10299590:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10305022-10305143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10306079-10306310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10307255-10307376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10311701-10311872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10315567-10315764:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10319863-10319889:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10321303-10321345:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10328047-10328201:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10330743-10331078:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10332917-10333024:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10335702-10335846:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10339535-10339783:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10349397-10349803:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10352803-10352955:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10360454-10360762:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10366333-10366529:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:10367764-10367778:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X3
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAASSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCAAGNGNSDSNLTTYSRPGQPTPYATTQLIQSNLSNNMNNGSGDSGEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYGISVDDSYDQEMPCPVPPARMYLQQDELEEDEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHVQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHTAQCPRPTSPVSTDSNMSAAVMQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVSKLPSIEARTDRSSDRKGGSYKGREVLDGRQVADMRTNPGDTREAQEQQNDGKGRGNKATKRDPPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQILGGYERGEENNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(9989539..9989593,10058783..10059109,10231845..10232002,10258785..10258905,10259257..10259395,10261445..10261572,10281935..10281943,10286483..10286607,10289230..10289401,10297200..10297405,10298915..10298996,10299172..10299340,10299424..10299590,10305022..10305143,10306079..10306310,10307255..10307376,10311701..10311872,10315567..10315764,10319863..10319889,10321303..10321345,10328047..10328201,10330908..10331078,10332917..10333024,10335702..10335846,10339535..10339783,10349397..10349803,10352803..10352955,10360454..10360762,10366333..10366529,10367764..10367778)
location: region:9989539-10367778:1
so has part: feature:9989539-9989593:1:exon
so has part: feature:10058783-10059109:1:exon
so has part: feature:10231845-10232002:1:exon
so has part: feature:10258785-10258905:1:exon
so has part: feature:10259257-10259395:1:exon
so has part: feature:10261445-10261572:1:exon
so has part: feature:10281935-10281943:1:exon
so has part: feature:10286483-10286607:1:exon
so has part: feature:10289230-10289401:1:exon
so has part: feature:10297200-10297405:1:exon
so has part: feature:10298915-10298996:1:exon
so has part: feature:10299172-10299340:1:exon
so has part: feature:10299424-10299590:1:exon
so has part: feature:10305022-10305143:1:exon
so has part: feature:10306079-10306310:1:exon
so has part: feature:10307255-10307376:1:exon
so has part: feature:10311701-10311872:1:exon
so has part: feature:10315567-10315764:1:exon
so has part: feature:10319863-10319889:1:exon
so has part: feature:10321303-10321345:1:exon
so has part: feature:10328047-10328201:1:exon
so has part: feature:10330908-10331078:1:exon
so has part: feature:10332917-10333024:1:exon
so has part: feature:10335702-10335846:1:exon
so has part: feature:10339535-10339783:1:exon
so has part: feature:10349397-10349803:1:exon
so has part: feature:10352803-10352955:1:exon
so has part: feature:10360454-10360762:1:exon
so has part: feature:10366333-10366529:1:exon
so has part: feature:10367764-10367778:1:exon

XP_046504010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9989539-9989593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10058783-10059109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10231845-10232002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10258785-10258905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10259257-10259395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10261445-10261572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10281935-10281943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10286483-10286607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10289230-10289401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10297200-10297405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10298915-10298996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10299172-10299340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10299424-10299590:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10305022-10305143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10306079-10306310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10307255-10307376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10311701-10311872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10315567-10315764:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10319863-10319889:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10321303-10321345:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10328047-10328201:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10330908-10331078:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10332917-10333024:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10335702-10335846:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10339535-10339783:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10349397-10349803:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10352803-10352955:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10360454-10360762:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10366333-10366529:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:10367764-10367778:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X2
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAASSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCAAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSGEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYGISVDDSYDQEMPCPVPPARMYLQQDELEEDEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHVQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHTAQCPRPTSPVSTDSNMSAAVMQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVSKLPSIEARTDRSSDRKGGSYKGREVLDGRQVADMRTNPGDTREAQEQQNDGKGRGNKATKRDPPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQILGGYERGEENNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(9989539..9989593,10058783..10059109,10231845..10232002,10258785..10258905,10259257..10259395,10261445..10261572,10281935..10281943,10286483..10286607,10289230..10289401,10297200..10297405,10298915..10298996,10299172..10299340,10299424..10299590,10305022..10305143,10306079..10306310,10307255..10307376,10311701..10311872,10315567..10315764,10321303..10321345,10328047..10328201,10330743..10331078,10332917..10333024,10335702..10335846,10339535..10339783,10349397..10349803,10352803..10352955,10360454..10360762,10366333..10366529,10367764..10367778)
location: region:9989539-10367778:1
so has part: feature:9989539-9989593:1:exon
so has part: feature:10058783-10059109:1:exon
so has part: feature:10231845-10232002:1:exon
so has part: feature:10258785-10258905:1:exon
so has part: feature:10259257-10259395:1:exon
so has part: feature:10261445-10261572:1:exon
so has part: feature:10281935-10281943:1:exon
so has part: feature:10286483-10286607:1:exon
so has part: feature:10289230-10289401:1:exon
so has part: feature:10297200-10297405:1:exon
so has part: feature:10298915-10298996:1:exon
so has part: feature:10299172-10299340:1:exon
so has part: feature:10299424-10299590:1:exon
so has part: feature:10305022-10305143:1:exon
so has part: feature:10306079-10306310:1:exon
so has part: feature:10307255-10307376:1:exon
so has part: feature:10311701-10311872:1:exon
so has part: feature:10315567-10315764:1:exon
so has part: feature:10321303-10321345:1:exon
so has part: feature:10328047-10328201:1:exon
so has part: feature:10330743-10331078:1:exon
so has part: feature:10332917-10333024:1:exon
so has part: feature:10335702-10335846:1:exon
so has part: feature:10339535-10339783:1:exon
so has part: feature:10349397-10349803:1:exon
so has part: feature:10352803-10352955:1:exon
so has part: feature:10360454-10360762:1:exon
so has part: feature:10366333-10366529:1:exon
so has part: feature:10367764-10367778:1:exon

XP_046504009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9989539-9989593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10058783-10059109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10231845-10232002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10258785-10258905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10259257-10259395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10261445-10261572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10281935-10281943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10286483-10286607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10289230-10289401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10297200-10297405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10298915-10298996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10299172-10299340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10299424-10299590:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10305022-10305143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10306079-10306310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10307255-10307376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10311701-10311872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10315567-10315764:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10321303-10321345:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10328047-10328201:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10330743-10331078:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10332917-10333024:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10335702-10335846:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10339535-10339783:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10349397-10349803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10352803-10352955:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10360454-10360762:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10366333-10366529:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10367764-10367778:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X4
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAASSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCAAGNGNSDSNLTTYSRPGQPTPYATTQLIQSNLSNNMNNGSGDSGEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYGISVDDSYDQEMPCPVPPARMYLQQDELEEDEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHVQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHTAQCPRPTSPVSTDSNMSAAVMQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVSKLPSIEARTDRSSDRKGGSYKGREVLDGRQVADMRTNPGDTREAQEQQNDGKGRGNKATKRDPPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQILGGYERGEENNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(9989539..9989593,10058783..10059109,10231845..10232002,10258785..10258905,10259257..10259395,10261445..10261572,10281935..10281943,10286483..10286607,10289230..10289401,10297200..10297405,10298915..10298996,10299172..10299340,10299424..10299590,10305022..10305143,10306079..10306310,10307255..10307376,10311701..10311872,10315567..10315764,10321303..10321345,10328047..10328201,10330908..10331078,10332917..10333024,10335702..10335846,10339535..10339783,10349397..10349803,10352803..10352955,10360454..10360762,10366333..10366529,10367764..10367778)
location: region:9989539-10367778:1
so has part: feature:9989539-9989593:1:exon
so has part: feature:10058783-10059109:1:exon
so has part: feature:10231845-10232002:1:exon
so has part: feature:10258785-10258905:1:exon
so has part: feature:10259257-10259395:1:exon
so has part: feature:10261445-10261572:1:exon
so has part: feature:10281935-10281943:1:exon
so has part: feature:10286483-10286607:1:exon
so has part: feature:10289230-10289401:1:exon
so has part: feature:10297200-10297405:1:exon
so has part: feature:10298915-10298996:1:exon
so has part: feature:10299172-10299340:1:exon
so has part: feature:10299424-10299590:1:exon
so has part: feature:10305022-10305143:1:exon
so has part: feature:10306079-10306310:1:exon
so has part: feature:10307255-10307376:1:exon
so has part: feature:10311701-10311872:1:exon
so has part: feature:10315567-10315764:1:exon
so has part: feature:10321303-10321345:1:exon
so has part: feature:10328047-10328201:1:exon
so has part: feature:10330908-10331078:1:exon
so has part: feature:10332917-10333024:1:exon
so has part: feature:10335702-10335846:1:exon
so has part: feature:10339535-10339783:1:exon
so has part: feature:10349397-10349803:1:exon
so has part: feature:10352803-10352955:1:exon
so has part: feature:10360454-10360762:1:exon
so has part: feature:10366333-10366529:1:exon
so has part: feature:10367764-10367778:1:exon

XP_046504011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9989539-9989593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10058783-10059109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10231845-10232002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10258785-10258905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10259257-10259395:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10261445-10261572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10281935-10281943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10286483-10286607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10289230-10289401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10297200-10297405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10298915-10298996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10299172-10299340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10299424-10299590:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10305022-10305143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10306079-10306310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10307255-10307376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10311701-10311872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10315567-10315764:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10321303-10321345:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10328047-10328201:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10330908-10331078:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10332917-10333024:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10335702-10335846:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10339535-10339783:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10349397-10349803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10352803-10352955:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10360454-10360762:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10366333-10366529:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10367764-10367778:1:exon

LOC124231523
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231523
note: uncharacterized LOC124231523; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10761641..10930103
location: region:10761641-10930103:1
so has part: feature:10761641-10930103:1:exon

124231523
type: Gene
SIO_000068: ncbigene

position:10761641:1
position: 10761641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10930103:1
position: 10930103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10761641-10930103:1:exon

LOC124231523
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231523
subclass of: SO_0000673
so part of: LOC124231523
location: 10761641..10761688
location: region:10761641-10761688:1
so has part: feature:10761641-10761688:1:exon

position:10761688:1
position: 10761688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10761641-10761688:1:exon

LOC124231523
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231523
subclass of: SO_0000673
so part of: LOC124231523
location: 10762871..10763031
location: region:10762871-10763031:1
so has part: feature:10762871-10763031:1:exon

position:10762871:1
position: 10762871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10763031:1
position: 10763031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10762871-10763031:1:exon

LOC124231523
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231523
subclass of: SO_0000673
so part of: LOC124231523
location: 10772002..10772083
location: region:10772002-10772083:1
so has part: feature:10772002-10772083:1:exon

position:10772002:1
position: 10772002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10772083:1
position: 10772083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10772002-10772083:1:exon

LOC124231523
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231523
subclass of: SO_0000673
so part of: LOC124231523
location: 10773442..10773543
location: region:10773442-10773543:1
so has part: feature:10773442-10773543:1:exon

position:10773442:1
position: 10773442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10773543:1
position: 10773543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10773442-10773543:1:exon

LOC124231523
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231523
subclass of: SO_0000673
so part of: LOC124231523
location: 10773978..10774118
location: region:10773978-10774118:1
so has part: feature:10773978-10774118:1:exon

position:10773978:1
position: 10773978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10774118:1
position: 10774118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10773978-10774118:1:exon

LOC124231523
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231523
subclass of: SO_0000673
so part of: LOC124231523
location: 10927330..10928167
location: region:10927330-10928167:1
so has part: feature:10927330-10928167:1:exon

position:10927330:1
position: 10927330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10928167:1
position: 10928167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10927330-10928167:1:exon

LOC124231523
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231523
subclass of: SO_0000673
so part of: LOC124231523
location: 10928208..10930103
location: region:10928208-10930103:1
so has part: feature:10928208-10930103:1:exon

position:10928208:1
position: 10928208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10928208-10930103:1:exon

ROBO2
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: ROBO2
note: roundabout guidance receptor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11186621..11753846)
location: region:11186621-11753846:-1
so has part: feature:11186621-11753846:-1:exon
subclass of: SO_0000010

124231347
type: Gene
SIO_000068: ncbigene

position:11186621:-1
position: 11186621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11753846:-1
position: 11753846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11186621-11753846:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_046648104.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
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SIO_000300: 28
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ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_046648103.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
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urn:…
SIO_000300: 29
SIO_000628: feature:11186621-11190481:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_046648102.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
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location: region:11186621-11753846:-1
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urn:…
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urn:…
SIO_000300: 26
SIO_000628: feature:11200675-11200848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11194239-11194511:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11192341-11192541:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:11186621-11190481:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_046648106.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(11186621..11190481,11192341..11192541,11200675..11200848,11214162..11214367,11218586..11218846,11227965..11228121,11234174..11234455,11239868..11239995,11241436..11241478,11248939..11249121,11258676..11258847,11261134..11261258,11263877..11264108,11271878..11271999,11275135..11275301,11276879..11277041,11277483..11277564,11281774..11281979,11286638..11286809,11291242..11291366,11308557..11308568,11313080..11313207,11339842..11339980,11351062..11351182,11354356..11354513,11699061..11699387,11752893..11753845))
location: region:11186621-11753845:-1
so has part: feature:11752893-11753845:-1:exon
so has part: feature:11699061-11699387:-1:exon
so has part: feature:11354356-11354513:-1:exon
so has part: feature:11351062-11351182:-1:exon
so has part: feature:11339842-11339980:-1:exon
so has part: feature:11313080-11313207:-1:exon
so has part: feature:11308557-11308568:-1:exon
so has part: feature:11291242-11291366:-1:exon
so has part: feature:11286638-11286809:-1:exon
so has part: feature:11281774-11281979:-1:exon
so has part: feature:11277483-11277564:-1:exon
so has part: feature:11276879-11277041:-1:exon
so has part: feature:11275135-11275301:-1:exon
so has part: feature:11271878-11271999:-1:exon
so has part: feature:11263877-11264108:-1:exon
so has part: feature:11261134-11261258:-1:exon
so has part: feature:11258676-11258847:-1:exon
so has part: feature:11248939-11249121:-1:exon
so has part: feature:11241436-11241478:-1:exon
so has part: feature:11239868-11239995:-1:exon
so has part: feature:11234174-11234455:-1:exon
so has part: feature:11227965-11228121:-1:exon
so has part: feature:11218586-11218846:-1:exon
so has part: feature:11214162-11214367:-1:exon
so has part: feature:11200675-11200848:-1:exon
so has part: feature:11192341-11192541:-1:exon
so has part: feature:11186621-11190481:-1:exon

position:11753845:-1
position: 11753845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11752893-11753845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11699061-11699387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11354356-11354513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11351062-11351182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11339842-11339980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11313080-11313207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11308557-11308568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11291242-11291366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11286638-11286809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11281774-11281979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11277483-11277564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11276879-11277041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11275135-11275301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11271878-11271999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11263877-11264108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11261134-11261258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11258676-11258847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11248939-11249121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11241436-11241478:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11239868-11239995:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11234174-11234455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11227965-11228121:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11218586-11218846:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11214162-11214367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11200675-11200848:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11192341-11192541:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11186621-11190481:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_046648105.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(11186621..11190481,11192341..11192541,11200675..11200848,11203058..11203240,11214162..11214367,11218586..11218846,11227965..11228121,11234174..11234455,11239868..11239995,11241436..11241478,11248939..11249121,11258676..11258847,11261134..11261258,11263877..11264108,11271878..11271999,11275135..11275301,11276879..11277041,11277483..11277564,11281774..11281979,11286638..11286809,11291242..11291366,11308557..11308568,11313080..11313207,11339842..11339980,11351062..11351182,11354356..11354513,11699061..11699387,11752893..11753845))
location: region:11186621-11753845:-1
so has part: feature:11752893-11753845:-1:exon
so has part: feature:11699061-11699387:-1:exon
so has part: feature:11354356-11354513:-1:exon
so has part: feature:11351062-11351182:-1:exon
so has part: feature:11339842-11339980:-1:exon
so has part: feature:11313080-11313207:-1:exon
so has part: feature:11308557-11308568:-1:exon
so has part: feature:11291242-11291366:-1:exon
so has part: feature:11286638-11286809:-1:exon
so has part: feature:11281774-11281979:-1:exon
so has part: feature:11277483-11277564:-1:exon
so has part: feature:11276879-11277041:-1:exon
so has part: feature:11275135-11275301:-1:exon
so has part: feature:11271878-11271999:-1:exon
so has part: feature:11263877-11264108:-1:exon
so has part: feature:11261134-11261258:-1:exon
so has part: feature:11258676-11258847:-1:exon
so has part: feature:11248939-11249121:-1:exon
so has part: feature:11241436-11241478:-1:exon
so has part: feature:11239868-11239995:-1:exon
so has part: feature:11234174-11234455:-1:exon
so has part: feature:11227965-11228121:-1:exon
so has part: feature:11218586-11218846:-1:exon
so has part: feature:11214162-11214367:-1:exon
so has part: feature:11203058-11203240:-1:exon
so has part: feature:11200675-11200848:-1:exon
so has part: feature:11192341-11192541:-1:exon
so has part: feature:11186621-11190481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11752893-11753845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11699061-11699387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11354356-11354513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11351062-11351182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11339842-11339980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11313080-11313207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11308557-11308568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11291242-11291366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11286638-11286809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11281774-11281979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11277483-11277564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11276879-11277041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11275135-11275301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11271878-11271999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11263877-11264108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11261134-11261258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11258676-11258847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11248939-11249121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11241436-11241478:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11239868-11239995:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11234174-11234455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11227965-11228121:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11218586-11218846:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11214162-11214367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11203058-11203240:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11200675-11200848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11192341-11192541:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11186621-11190481:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X2
translation: MSRLMFTQLLLCGFLYVRVDGSRLRQEDFPPRIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSRNASLEVALLRDDFRQNPTDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFERPTFLRRPINQVVLEEEAVEFRCQVQGDPQPTVRWKKDDADLPRGRYDIKDDYTLRIKKAVSTDEGTYLCIAENRVGKVEASATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLGVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVLYRQTSGLQATSTWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTIRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDDQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPNYPWLADSWPATSLPVNNSNSGPNEIGNFGRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNGGKGGKKKKNKNSSKPQKNNGSNWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNNQPPQPPVPPLGYMSGALISDLETDVPDDDADDEEEALEIPRPLRALEQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFASGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALSQSQRPRPTKKQNGRRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSTERKGSSLERQQASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKALHKQGVGPEETLVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEALRGSHQRNASDLLDIGYMGSNSQGQFTE
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(11190477..11190481,11192350..11192541,11194239..11194511,11200675..11200848,11203058..11203240,11214162..11214367,11218586..11218846,11227965..11228121,11234174..11234455,11239868..11239995,11241436..11241478,11248939..11249121,11258676..11258847,11261134..11261258,11263877..11264108,11271878..11271999,11275135..11275301,11276879..11277041,11277483..11277564,11281774..11281979,11286638..11286809,11291242..11291366,11308557..11308568,11313080..11313207,11339842..11339980,11351062..11351182,11354356..11354513,11699061..11699387,11752893..11752953))
location: region:11190477-11752953:-1
so has part: feature:11752893-11752953:-1:exon
so has part: feature:11699061-11699387:-1:exon
so has part: feature:11354356-11354513:-1:exon
so has part: feature:11351062-11351182:-1:exon
so has part: feature:11339842-11339980:-1:exon
so has part: feature:11313080-11313207:-1:exon
so has part: feature:11308557-11308568:-1:exon
so has part: feature:11291242-11291366:-1:exon
so has part: feature:11286638-11286809:-1:exon
so has part: feature:11281774-11281979:-1:exon
so has part: feature:11277483-11277564:-1:exon
so has part: feature:11276879-11277041:-1:exon
so has part: feature:11275135-11275301:-1:exon
so has part: feature:11271878-11271999:-1:exon
so has part: feature:11263877-11264108:-1:exon
so has part: feature:11261134-11261258:-1:exon
so has part: feature:11258676-11258847:-1:exon
so has part: feature:11248939-11249121:-1:exon
so has part: feature:11241436-11241478:-1:exon
so has part: feature:11239868-11239995:-1:exon
so has part: feature:11234174-11234455:-1:exon
so has part: feature:11227965-11228121:-1:exon
so has part: feature:11218586-11218846:-1:exon
so has part: feature:11214162-11214367:-1:exon
so has part: feature:11203058-11203240:-1:exon
so has part: feature:11200675-11200848:-1:exon
so has part: feature:11194239-11194511:-1:exon
so has part: feature:11192350-11192541:-1:exon
so has part: feature:11190477-11190481:-1:exon

XP_046504059.1
type: Protein
SIO_000068: ncbiprotein

position:11190477:-1
position: 11190477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11752953:-1
position: 11752953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11752893-11752953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11699061-11699387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11354356-11354513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11351062-11351182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11339842-11339980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11313080-11313207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11308557-11308568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11291242-11291366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11286638-11286809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11281774-11281979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11277483-11277564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11276879-11277041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11275135-11275301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11271878-11271999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11263877-11264108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11261134-11261258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11258676-11258847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11248939-11249121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11241436-11241478:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11239868-11239995:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11234174-11234455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11227965-11228121:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11218586-11218846:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11214162-11214367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11203058-11203240:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11200675-11200848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11194239-11194511:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11192350-11192541:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:11190477-11190481:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X5
translation: MSRLMFTQLLLCGFLYVRVDGSRLRQEDFPPRIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSRNASLEVALLRDDFRQNPTDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFERPTFLRRPINQVVLEEEAVEFRCQVQGDPQPTVRWKKDDADLPRGRYDIKDDYTLRIKKAVSTDEGTYLCIAENRVGKVEASATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLGVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVLYRQTSGLQATSTWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTIRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDDQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPNYPWLADSWPATSLPVNNSNSGPNEIGNFGRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNGGKGGKKKKNKNSSKPQKNNGSNWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNNQPPQPPVPPLGYMSGALISDLETDVPDDDADDEEEALEIPRPLRALEQTPGSSMDNLDSSVTGKAFTSSQRPRPTSPFSTDSNTSAALSQSQRPRPTKKQNGRRMDQQPALPHRREGMTDEETLVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEALRGSHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(11190480..11190481,11192341..11192541,11200675..11200848,11214162..11214367,11218586..11218846,11227965..11228121,11234174..11234455,11239868..11239995,11241436..11241478,11248939..11249121,11258676..11258847,11261134..11261258,11263877..11264108,11271878..11271999,11275135..11275301,11276879..11277041,11277483..11277564,11281774..11281979,11286638..11286809,11291242..11291366,11308557..11308568,11313080..11313207,11339842..11339980,11351062..11351182,11354356..11354513,11699061..11699387,11752893..11752953))
location: region:11190480-11752953:-1
so has part: feature:11752893-11752953:-1:exon
so has part: feature:11699061-11699387:-1:exon
so has part: feature:11354356-11354513:-1:exon
so has part: feature:11351062-11351182:-1:exon
so has part: feature:11339842-11339980:-1:exon
so has part: feature:11313080-11313207:-1:exon
so has part: feature:11308557-11308568:-1:exon
so has part: feature:11291242-11291366:-1:exon
so has part: feature:11286638-11286809:-1:exon
so has part: feature:11281774-11281979:-1:exon
so has part: feature:11277483-11277564:-1:exon
so has part: feature:11276879-11277041:-1:exon
so has part: feature:11275135-11275301:-1:exon
so has part: feature:11271878-11271999:-1:exon
so has part: feature:11263877-11264108:-1:exon
so has part: feature:11261134-11261258:-1:exon
so has part: feature:11258676-11258847:-1:exon
so has part: feature:11248939-11249121:-1:exon
so has part: feature:11241436-11241478:-1:exon
so has part: feature:11239868-11239995:-1:exon
so has part: feature:11234174-11234455:-1:exon
so has part: feature:11227965-11228121:-1:exon
so has part: feature:11218586-11218846:-1:exon
so has part: feature:11214162-11214367:-1:exon
so has part: feature:11200675-11200848:-1:exon
so has part: feature:11192341-11192541:-1:exon
so has part: feature:11190480-11190481:-1:exon

XP_046504062.1
type: Protein
SIO_000068: ncbiprotein

position:11190480:-1
position: 11190480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11752893-11752953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11699061-11699387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11354356-11354513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11351062-11351182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11339842-11339980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11313080-11313207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11308557-11308568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11291242-11291366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11286638-11286809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11281774-11281979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11277483-11277564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11276879-11277041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11275135-11275301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11271878-11271999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11263877-11264108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11261134-11261258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11258676-11258847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11248939-11249121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11241436-11241478:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11239868-11239995:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11234174-11234455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11227965-11228121:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11218586-11218846:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11214162-11214367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11200675-11200848:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11192341-11192541:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11190480-11190481:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X3
translation: MSRLMFTQLLLCGFLYVRVDGSRLRQEDFPPRIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSRNASLEVALLRDDFRQNPTDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFERPTFLRRPINQVVLEEEAVEFRCQVQGDPQPTVRWKKDDADLPRGRYDIKDDYTLRIKKAVSTDEGTYLCIAENRVGKVEASATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLGVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVLYRQTSGLQATSTWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTIRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDDQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPNYPWLADSWPATSLPVNNSNSGPNEIGNFGRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNGGKGGKKKKNKNSSKPQKNNGSNWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNNQPPQPPVPPLGYMSGALISDLETDVPDDDADDEEEALEIPRPLRALEQTPGSSMDNLDSSVTGKAFTSSQRPRPTSPFSTDSNTSAALSQSQRPRPTKKQNGRRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSTERKGSSLERQQASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKALHKQGVGPEETLVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEALRGSHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(11190480..11190481,11192341..11192541,11194239..11194511,11200675..11200848,11214162..11214367,11218586..11218846,11227965..11228121,11234174..11234455,11239868..11239995,11241436..11241478,11248939..11249121,11258676..11258847,11261134..11261258,11263877..11264108,11271878..11271999,11275135..11275301,11276879..11277041,11277483..11277564,11281774..11281979,11286638..11286809,11291242..11291366,11308557..11308568,11313080..11313207,11339842..11339980,11351062..11351182,11354356..11354513,11699061..11699387,11752893..11752953))
location: region:11190480-11752953:-1
so has part: feature:11752893-11752953:-1:exon
so has part: feature:11699061-11699387:-1:exon
so has part: feature:11354356-11354513:-1:exon
so has part: feature:11351062-11351182:-1:exon
so has part: feature:11339842-11339980:-1:exon
so has part: feature:11313080-11313207:-1:exon
so has part: feature:11308557-11308568:-1:exon
so has part: feature:11291242-11291366:-1:exon
so has part: feature:11286638-11286809:-1:exon
so has part: feature:11281774-11281979:-1:exon
so has part: feature:11277483-11277564:-1:exon
so has part: feature:11276879-11277041:-1:exon
so has part: feature:11275135-11275301:-1:exon
so has part: feature:11271878-11271999:-1:exon
so has part: feature:11263877-11264108:-1:exon
so has part: feature:11261134-11261258:-1:exon
so has part: feature:11258676-11258847:-1:exon
so has part: feature:11248939-11249121:-1:exon
so has part: feature:11241436-11241478:-1:exon
so has part: feature:11239868-11239995:-1:exon
so has part: feature:11234174-11234455:-1:exon
so has part: feature:11227965-11228121:-1:exon
so has part: feature:11218586-11218846:-1:exon
so has part: feature:11214162-11214367:-1:exon
so has part: feature:11200675-11200848:-1:exon
so has part: feature:11194239-11194511:-1:exon
so has part: feature:11192341-11192541:-1:exon
so has part: feature:11190480-11190481:-1:exon

XP_046504060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11752893-11752953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11699061-11699387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11354356-11354513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11351062-11351182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11339842-11339980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11313080-11313207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11308557-11308568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11291242-11291366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11286638-11286809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11281774-11281979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11277483-11277564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11276879-11277041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11275135-11275301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11271878-11271999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11263877-11264108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11261134-11261258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11258676-11258847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11248939-11249121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11241436-11241478:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11239868-11239995:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11234174-11234455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11227965-11228121:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11218586-11218846:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11214162-11214367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11200675-11200848:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11194239-11194511:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11192341-11192541:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11190480-11190481:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X4
translation: MSRLMFTQLLLCGFLYVRVDGSRLRQEDFPPRIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSRNASLEVALLRDDFRQNPTDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFERPTFLRRPINQVVLEEEAVEFRCQVQGDPQPTVRWKKDDADLPRGRYDIKDDYTLRIKKAVSTDEGTYLCIAENRVGKVEASATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLGVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVLYRQTSGLQATSTWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTIRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDDQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPNYPWLADSWPATSLPVNNSNSGPNEIGNFGRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNGGKGGKKKKNKNSSKPQKNNGSNWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNNQPPQPPVPPLGYMSGALISDLETDVPDDDADDEEEALEIPRPLRALEQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFASGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALSQSQRPRPTKKQNGRRMDQQPALPHRREGMTDEETLVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEALRGSHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(11190480..11190481,11192341..11192541,11200675..11200848,11203058..11203240,11214162..11214367,11218586..11218846,11227965..11228121,11234174..11234455,11239868..11239995,11241436..11241478,11248939..11249121,11258676..11258847,11261134..11261258,11263877..11264108,11271878..11271999,11275135..11275301,11276879..11277041,11277483..11277564,11281774..11281979,11286638..11286809,11291242..11291366,11308557..11308568,11313080..11313207,11339842..11339980,11351062..11351182,11354356..11354513,11699061..11699387,11752893..11752953))
location: region:11190480-11752953:-1
so has part: feature:11752893-11752953:-1:exon
so has part: feature:11699061-11699387:-1:exon
so has part: feature:11354356-11354513:-1:exon
so has part: feature:11351062-11351182:-1:exon
so has part: feature:11339842-11339980:-1:exon
so has part: feature:11313080-11313207:-1:exon
so has part: feature:11308557-11308568:-1:exon
so has part: feature:11291242-11291366:-1:exon
so has part: feature:11286638-11286809:-1:exon
so has part: feature:11281774-11281979:-1:exon
so has part: feature:11277483-11277564:-1:exon
so has part: feature:11276879-11277041:-1:exon
so has part: feature:11275135-11275301:-1:exon
so has part: feature:11271878-11271999:-1:exon
so has part: feature:11263877-11264108:-1:exon
so has part: feature:11261134-11261258:-1:exon
so has part: feature:11258676-11258847:-1:exon
so has part: feature:11248939-11249121:-1:exon
so has part: feature:11241436-11241478:-1:exon
so has part: feature:11239868-11239995:-1:exon
so has part: feature:11234174-11234455:-1:exon
so has part: feature:11227965-11228121:-1:exon
so has part: feature:11218586-11218846:-1:exon
so has part: feature:11214162-11214367:-1:exon
so has part: feature:11203058-11203240:-1:exon
so has part: feature:11200675-11200848:-1:exon
so has part: feature:11192341-11192541:-1:exon
so has part: feature:11190480-11190481:-1:exon

XP_046504061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11752893-11752953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11699061-11699387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11354356-11354513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11351062-11351182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11339842-11339980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11313080-11313207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11308557-11308568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11291242-11291366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11286638-11286809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11281774-11281979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11277483-11277564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11276879-11277041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11275135-11275301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11271878-11271999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11263877-11264108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11261134-11261258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11258676-11258847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11248939-11249121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11241436-11241478:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11239868-11239995:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11234174-11234455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11227965-11228121:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11218586-11218846:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11214162-11214367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11203058-11203240:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11200675-11200848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11192341-11192541:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11190480-11190481:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X1
translation: MSRLMFTQLLLCGFLYVRVDGSRLRQEDFPPRIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSRNASLEVALLRDDFRQNPTDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFERPTFLRRPINQVVLEEEAVEFRCQVQGDPQPTVRWKKDDADLPRGRYDIKDDYTLRIKKAVSTDEGTYLCIAENRVGKVEASATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLGVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVLYRQTSGLQATSTWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTIRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDDQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPNYPWLADSWPATSLPVNNSNSGPNEIGNFGRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNGGKGGKKKKNKNSSKPQKNNGSNWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNNQPPQPPVPPLGYMSGALISDLETDVPDDDADDEEEALEIPRPLRALEQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFASGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALSQSQRPRPTKKQNGRRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSTERKGSSLERQQASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKALHKQGVGPEETLVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEALRGSHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(11190480..11190481,11192341..11192541,11194239..11194511,11200675..11200848,11203058..11203240,11214162..11214367,11218586..11218846,11227965..11228121,11234174..11234455,11239868..11239995,11241436..11241478,11248939..11249121,11258676..11258847,11261134..11261258,11263877..11264108,11271878..11271999,11275135..11275301,11276879..11277041,11277483..11277564,11281774..11281979,11286638..11286809,11291242..11291366,11308557..11308568,11313080..11313207,11339842..11339980,11351062..11351182,11354356..11354513,11699061..11699387,11752893..11752953))
location: region:11190480-11752953:-1
so has part: feature:11752893-11752953:-1:exon
so has part: feature:11699061-11699387:-1:exon
so has part: feature:11354356-11354513:-1:exon
so has part: feature:11351062-11351182:-1:exon
so has part: feature:11339842-11339980:-1:exon
so has part: feature:11313080-11313207:-1:exon
so has part: feature:11308557-11308568:-1:exon
so has part: feature:11291242-11291366:-1:exon
so has part: feature:11286638-11286809:-1:exon
so has part: feature:11281774-11281979:-1:exon
so has part: feature:11277483-11277564:-1:exon
so has part: feature:11276879-11277041:-1:exon
so has part: feature:11275135-11275301:-1:exon
so has part: feature:11271878-11271999:-1:exon
so has part: feature:11263877-11264108:-1:exon
so has part: feature:11261134-11261258:-1:exon
so has part: feature:11258676-11258847:-1:exon
so has part: feature:11248939-11249121:-1:exon
so has part: feature:11241436-11241478:-1:exon
so has part: feature:11239868-11239995:-1:exon
so has part: feature:11234174-11234455:-1:exon
so has part: feature:11227965-11228121:-1:exon
so has part: feature:11218586-11218846:-1:exon
so has part: feature:11214162-11214367:-1:exon
so has part: feature:11203058-11203240:-1:exon
so has part: feature:11200675-11200848:-1:exon
so has part: feature:11194239-11194511:-1:exon
so has part: feature:11192341-11192541:-1:exon
so has part: feature:11190480-11190481:-1:exon

XP_046504058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11752893-11752953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11699061-11699387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11354356-11354513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11351062-11351182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11339842-11339980:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11313080-11313207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11308557-11308568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11291242-11291366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11286638-11286809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11281774-11281979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11277483-11277564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11276879-11277041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11275135-11275301:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11271878-11271999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11263877-11264108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11261134-11261258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11258676-11258847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11248939-11249121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11241436-11241478:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11239868-11239995:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11234174-11234455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11227965-11228121:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11218586-11218846:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11214162-11214367:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11203058-11203240:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11200675-11200848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11194239-11194511:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11192341-11192541:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:11190480-11190481:-1:exon

LOC124231351
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231351
note: calponin-3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12779096..12780691
location: region:12779096-12780691:1
so has part: feature:12779096-12780691:1:exon
subclass of: SO_0000010

124231351
type: Gene
SIO_000068: ncbigene

position:12779096:1
position: 12779096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12780691:1
position: 12780691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12779096-12780691:1:exon

LOC124231351
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: LOC124231351
product: calponin-3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648115.1
SIO_010081: LOC124231351
subclass of: SO_0000673
so part of: LOC124231351
location: 12779096..12780691
location: region:12779096-12780691:1
so has part: feature:12779096-12780691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12779096-12780691:1:exon

LOC124231351
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: LOC124231351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calponin-3-like
translation: MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGTNFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDVGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCTSQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQDDYPRDYQYGDQGLDY
SIO_010081: LOC124231351
subclass of: SO_0000673
so part of: LOC124231351
location: 12779180..12780169
location: region:12779180-12780169:1
so has part: feature:12779180-12780169:1:exon

XP_046504071.1
type: Protein
SIO_000068: ncbiprotein

position:12779180:1
position: 12779180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12780169:1
position: 12780169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12779180-12780169:1:exon

LIPI
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LIPI
note: lipase I; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12825151..12904642)
location: region:12825151-12904642:-1
so has part: feature:12825151-12904642:-1:exon
subclass of: SO_0000010

124231526
type: Gene
SIO_000068: ncbigene

position:12825151:-1
position: 12825151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12904642:-1
position: 12904642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12825151-12904642:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: LIPI
product: lipase I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_046648331.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(12825151..12825238,12842607..12842783,12848617..12848728,12858500..12858601,12860255..12860422,12861387..12861476,12875914..12876015,12877899..12878007,12886944..12887329,12904453..12904642))
location: region:12825151-12904642:-1
so has part: feature:12904453-12904642:-1:exon
so has part: feature:12886944-12887329:-1:exon
so has part: feature:12877899-12878007:-1:exon
so has part: feature:12875914-12876015:-1:exon
so has part: feature:12861387-12861476:-1:exon
so has part: feature:12860255-12860422:-1:exon
so has part: feature:12858500-12858601:-1:exon
so has part: feature:12848617-12848728:-1:exon
so has part: feature:12842607-12842783:-1:exon
so has part: feature:12825151-12825238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12904453-12904642:-1:exon

position:12904453:-1
position: 12904453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12886944-12887329:-1:exon

position:12886944:-1
position: 12886944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12887329:-1
position: 12887329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12877899-12878007:-1:exon

position:12877899:-1
position: 12877899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12878007:-1
position: 12878007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12875914-12876015:-1:exon

position:12875914:-1
position: 12875914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12876015:-1
position: 12876015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12861387-12861476:-1:exon

position:12861387:-1
position: 12861387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12861476:-1
position: 12861476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12860255-12860422:-1:exon

position:12860255:-1
position: 12860255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12860422:-1
position: 12860422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12858500-12858601:-1:exon

position:12858500:-1
position: 12858500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12858601:-1
position: 12858601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12848617-12848728:-1:exon

position:12848617:-1
position: 12848617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12848728:-1
position: 12848728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12842607-12842783:-1:exon

position:12842607:-1
position: 12842607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12842783:-1
position: 12842783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12825151-12825238:-1:exon

position:12825238:-1
position: 12825238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: LIPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I
translation: MSAREWRRRRDPAPSRRFTAPPGRGGGAGDEAARAGAERSCEATPPAPRGDHPRRLLPRFQRDQNKRPCLEFSHLSVKDSFKDLFIPKTETFLIMYTRSNLNCAEPLFEQNYSLNVNFNVSKKTVWLIHGYRPTGSPPAWLQNFLRVLLKQDDMNIIVVDWNRGATTFIYDRAVKNTRKVAESLSESVQSLLKHGASLDNFHFIGVSLGAHISGFVGKKFQGQLGRITGVDPAGPKFSGKPSSGRLDYTDAKFVDVIHSDTDGLGIKEPLGHIDFYPNGGKKQPGCPKSIFSGIDFIKCDHQRAVYLFMATLETNCNFISFPCNSYKDYKTGSCVDCDNFKTKSCPRLGYQAELWKDVLKEKTAGRFQTSVFLDTTGANPFCTYYFVLSITSLDETMKDGYITFKLFNQIGVVEKARLYKKNKSFYKLQEAKILAQFFNDVVNISSIHLAYFQSSHQRCSTCEYIIQRLMLKSLTYPERPPLCMYDFVLKESKEVFLNPSACITKET
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(12825151..12825238,12842607..12842783,12848617..12848728,12858500..12858601,12860255..12860422,12861387..12861476,12875914..12876015,12877899..12878007,12886944..12887329,12904453..12904642))
location: region:12825151-12904642:-1
so has part: feature:12904453-12904642:-1:exon
so has part: feature:12886944-12887329:-1:exon
so has part: feature:12877899-12878007:-1:exon
so has part: feature:12875914-12876015:-1:exon
so has part: feature:12861387-12861476:-1:exon
so has part: feature:12860255-12860422:-1:exon
so has part: feature:12858500-12858601:-1:exon
so has part: feature:12848617-12848728:-1:exon
so has part: feature:12842607-12842783:-1:exon
so has part: feature:12825151-12825238:-1:exon

XP_046504287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12904453-12904642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12886944-12887329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12877899-12878007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12875914-12876015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12861387-12861476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12860255-12860422:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12858500-12858601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12848617-12848728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12842607-12842783:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12825151-12825238:-1:exon

RBM11
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: RBM11
note: RNA binding motif protein 11; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12904642..12916480
location: region:12904642-12916480:1
so has part: feature:12904642-12916480:1:exon
subclass of: SO_0000010

124231498
type: Gene
SIO_000068: ncbigene

position:12904642:1
position: 12904642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12916480:1
position: 12916480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12904642-12916480:1:exon

RBM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: RBM11
product: RNA binding motif protein 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_046648314.1
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(12904642..12904745,12908297..12908459,12909675..12909747,12913739..12913832,12915476..12916480)
location: region:12904642-12916480:1
so has part: feature:12904642-12904745:1:exon
so has part: feature:12908297-12908459:1:exon
so has part: feature:12909675-12909747:1:exon
so has part: feature:12913739-12913832:1:exon
so has part: feature:12915476-12916480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12904642-12904745:1:exon

position:12904745:1
position: 12904745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12908297-12908459:1:exon

position:12908297:1
position: 12908297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12908459:1
position: 12908459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12909675-12909747:1:exon

position:12909675:1
position: 12909675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12909747:1
position: 12909747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12913739-12913832:1:exon

position:12913739:1
position: 12913739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12913832:1
position: 12913832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12915476-12916480:1:exon

position:12915476:1
position: 12915476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: RBM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing regulator RBM11
translation: MFPAQEEADRTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEGASRSCFPMPFFPITAALPQEYFFFQNMQWQAYNPALQLPYYEMTAPLPNSASVSSSLNCVSDFEAGPSSYEWTHQQTSDSDLYQMNKRKRQKQTSDSDSSTENSRGNEYSQKFRKCKKKKRY
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(12904650..12904745,12908297..12908459,12909675..12909747,12913739..12913832,12915476..12915763)
location: region:12904650-12915763:1
so has part: feature:12904650-12904745:1:exon
so has part: feature:12908297-12908459:1:exon
so has part: feature:12909675-12909747:1:exon
so has part: feature:12913739-12913832:1:exon
so has part: feature:12915476-12915763:1:exon

XP_046504270.1
type: Protein
SIO_000068: ncbiprotein

position:12904650:1
position: 12904650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12915763:1
position: 12915763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12904650-12904745:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12908297-12908459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12909675-12909747:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12913739-12913832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12915476-12915763:1:exon

LOC124231256
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231256
note: multidrug resistance-associated protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12969196..13051178
location: region:12969196-13051178:1
so has part: feature:12969196-13051178:1:exon
subclass of: SO_0000010

124231256
type: Gene
SIO_000068: ncbigene

position:12969196:1
position: 12969196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13051178:1
position: 13051178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12969196-13051178:1:exon

LOC124231256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: LOC124231256
product: multidrug resistance-associated protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_046647939.1
SIO_010081: LOC124231256
subclass of: SO_0000673
so part of: LOC124231256
location: join(12969196..12969326,12974933..12974994,12981271..12981418,12982226..12982368,12988233..12988410,12998774..12999028,13001066..13001131,13004332..13004469,13005855..13006001,13007709..13007793,13007889..13007955,13008327..13008453,13012527..13012703,13015767..13015934,13017384..13017546,13020923..13020998,13028174..13028234,13028693..13028912,13033587..13033741,13035630..13035785,13038884..13039083,13040294..13040420,13041770..13041871,13044384..13044527,13046955..13047113,13048395..13048561,13049536..13049730,13050081..13051178)
location: region:12969196-13051178:1
so has part: feature:12969196-12969326:1:exon
so has part: feature:12974933-12974994:1:exon
so has part: feature:12981271-12981418:1:exon
so has part: feature:12982226-12982368:1:exon
so has part: feature:12988233-12988410:1:exon
so has part: feature:12998774-12999028:1:exon
so has part: feature:13001066-13001131:1:exon
so has part: feature:13004332-13004469:1:exon
so has part: feature:13005855-13006001:1:exon
so has part: feature:13007709-13007793:1:exon
so has part: feature:13007889-13007955:1:exon
so has part: feature:13008327-13008453:1:exon
so has part: feature:13012527-13012703:1:exon
so has part: feature:13015767-13015934:1:exon
so has part: feature:13017384-13017546:1:exon
so has part: feature:13020923-13020998:1:exon
so has part: feature:13028174-13028234:1:exon
so has part: feature:13028693-13028912:1:exon
so has part: feature:13033587-13033741:1:exon
so has part: feature:13035630-13035785:1:exon
so has part: feature:13038884-13039083:1:exon
so has part: feature:13040294-13040420:1:exon
so has part: feature:13041770-13041871:1:exon
so has part: feature:13044384-13044527:1:exon
so has part: feature:13046955-13047113:1:exon
so has part: feature:13048395-13048561:1:exon
so has part: feature:13049536-13049730:1:exon
so has part: feature:13050081-13051178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12969196-12969326:1:exon

position:12969326:1
position: 12969326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12974933-12974994:1:exon

position:12974933:1
position: 12974933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12974994:1
position: 12974994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12981271-12981418:1:exon

position:12981271:1
position: 12981271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12981418:1
position: 12981418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12982226-12982368:1:exon

position:12982226:1
position: 12982226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12982368:1
position: 12982368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12988233-12988410:1:exon

position:12988233:1
position: 12988233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12988410:1
position: 12988410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12998774-12999028:1:exon

position:12998774:1
position: 12998774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12999028:1
position: 12999028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13001066-13001131:1:exon

position:13001066:1
position: 13001066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13001131:1
position: 13001131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13004332-13004469:1:exon

position:13004332:1
position: 13004332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13004469:1
position: 13004469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13005855-13006001:1:exon

position:13005855:1
position: 13005855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13006001:1
position: 13006001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13007709-13007793:1:exon

position:13007709:1
position: 13007709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13007793:1
position: 13007793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13007889-13007955:1:exon

position:13007889:1
position: 13007889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13007955:1
position: 13007955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13008327-13008453:1:exon

position:13008327:1
position: 13008327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13008453:1
position: 13008453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13012527-13012703:1:exon

position:13012527:1
position: 13012527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13012703:1
position: 13012703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13015767-13015934:1:exon

position:13015767:1
position: 13015767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13015934:1
position: 13015934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13017384-13017546:1:exon

position:13017384:1
position: 13017384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13017546:1
position: 13017546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13020923-13020998:1:exon

position:13020923:1
position: 13020923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13020998:1
position: 13020998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13028174-13028234:1:exon

position:13028174:1
position: 13028174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13028234:1
position: 13028234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13028693-13028912:1:exon

position:13028693:1
position: 13028693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13028912:1
position: 13028912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:13033587-13033741:1:exon

position:13033587:1
position: 13033587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13033741:1
position: 13033741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:13035630-13035785:1:exon

position:13035630:1
position: 13035630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13035785:1
position: 13035785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:13038884-13039083:1:exon

position:13038884:1
position: 13038884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13039083:1
position: 13039083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:13040294-13040420:1:exon

position:13040294:1
position: 13040294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13040420:1
position: 13040420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:13041770-13041871:1:exon

position:13041770:1
position: 13041770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13041871:1
position: 13041871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:13044384-13044527:1:exon

position:13044384:1
position: 13044384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13044527:1
position: 13044527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:13046955-13047113:1:exon

position:13046955:1
position: 13046955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13047113:1
position: 13047113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:13048395-13048561:1:exon

position:13048395:1
position: 13048395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13048561:1
position: 13048561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:13049536-13049730:1:exon

position:13049536:1
position: 13049536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13049730:1
position: 13049730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:13050081-13051178:1:exon

position:13050081:1
position: 13050081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124231256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: LOC124231256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multidrug resistance-associated protein 1-like
translation: MFSILRRWGASSSYQRVPGGPEAQKCSPEKSASFFSKMTYSWFSRIIILGYKKPLEREDLFELNESDSSYVICPVFEKQWRKEVLRNQERQKVKASFHKEAHTRKPSLLCALWNTFKFVLIQVALFKVLADILSFTSPLIMKQMIIFCEHRPDFGWSGYGYALALFVVVFLQTLILQQYQRFNILTSAKIKTAVIGLIYKKALFLSNVSRKKFSTGEIINLMSADAQQLMDLTANLNLLWSAPFQILVAVSLLWQELGPAVLAGVAVLVLVIPINALVATRVKKLKKSQTKNKDKQIKLLNEILHGIKILKLYAWEPSYKKKIIEIREQELEIQKSAGYLAVFSMLTLTCIPFLVSLATFGIYFLLDEGNVLTATKVFTSISLFNILRLPLFDLPTVISAVVQARISLGRLEDFLSSEELLPQNIETNYTGDHAIAFTNASFAWDKTGIPVLKDLNIKIPEGALVAVVGQVGSGKSSVLSAILGEMEKLTGVVQRKGSVAYVSQQAWIQNCILQENILFGSIMQKQFYERVLEACALLPDLEQLPNGDQTEIGERGVNISGGQKHRVSLARAVYSGADIYLLDDPLSAVDVHVGKQLFEKVIGSSGILKNKTRILVTHNLTLLPQMDLIIVMGSGRVAQMGTYQELLSKTKNLANLLQVFSEQEKAHALEQVSVINSRTILKDQILEQNDRPSLDQGKQFSMKKEKIPIGGVKFSIILKYLRAFGWLWVWLSMATYLGQNLVGIGQNLWLSAWAKEAKHVSEFTEWKQIRSNNLNIYGLLGLMQGLFVCSGAYVLTRGSLAASRTLHTQLLDNVLHLPLQFFETNPIGQIINRFTKDMFIIDMRFHYYLRTWVNCTLDVIGTVLVIVGALPLFILGVIPLVFLYFAIQRYYVASSRQIRRLAGASRSPIISHFSETLLGVSTIRAFAHERRFIQQNKEVVNENLVCFYNNVISNRWLSVRLEFLGNLMVFFAALLAVLAGDSIDSAIVGLSISYALNITQSLNFWVRKACEIETNAVSIERVCEYENMDKEAPWIMSKRPPSQWPHKGVVEFINYQARYRDDLGLALQDITFQTHGEEKIGIVGRTGAGKSTLSNCLFRILERSGGKIIIDGIDISTIGLHDLRGKLNIIPQDPVLFSGTLQMNLDPLDKYSDSELWEVLELCHLKEFVQSLPRKLLHEISEGGENLSVGQRQLICLARALLRKTKILVLDEATASIDFETDNLVQTTIRKEFSDCTILTIAHRLHSVIDSDRVLVLDSGRIIEFETPRNLICQKGLFFAMLTEAGITQDSGTKK
SIO_010081: LOC124231256
subclass of: SO_0000673
so part of: LOC124231256
location: join(12969255..12969326,12974933..12974994,12981271..12981418,12982226..12982368,12988233..12988410,12998774..12999028,13001066..13001131,13004332..13004469,13005855..13006001,13007709..13007793,13007889..13007955,13008327..13008453,13012527..13012703,13015767..13015934,13017384..13017546,13020923..13020998,13028174..13028234,13028693..13028912,13033587..13033741,13035630..13035785,13038884..13039083,13040294..13040420,13041770..13041871,13044384..13044527,13046955..13047113,13048395..13048561,13049536..13049730,13050081..13050210)
location: region:12969255-13050210:1
so has part: feature:12969255-12969326:1:exon
so has part: feature:12974933-12974994:1:exon
so has part: feature:12981271-12981418:1:exon
so has part: feature:12982226-12982368:1:exon
so has part: feature:12988233-12988410:1:exon
so has part: feature:12998774-12999028:1:exon
so has part: feature:13001066-13001131:1:exon
so has part: feature:13004332-13004469:1:exon
so has part: feature:13005855-13006001:1:exon
so has part: feature:13007709-13007793:1:exon
so has part: feature:13007889-13007955:1:exon
so has part: feature:13008327-13008453:1:exon
so has part: feature:13012527-13012703:1:exon
so has part: feature:13015767-13015934:1:exon
so has part: feature:13017384-13017546:1:exon
so has part: feature:13020923-13020998:1:exon
so has part: feature:13028174-13028234:1:exon
so has part: feature:13028693-13028912:1:exon
so has part: feature:13033587-13033741:1:exon
so has part: feature:13035630-13035785:1:exon
so has part: feature:13038884-13039083:1:exon
so has part: feature:13040294-13040420:1:exon
so has part: feature:13041770-13041871:1:exon
so has part: feature:13044384-13044527:1:exon
so has part: feature:13046955-13047113:1:exon
so has part: feature:13048395-13048561:1:exon
so has part: feature:13049536-13049730:1:exon
so has part: feature:13050081-13050210:1:exon

XP_046503895.1
type: Protein
SIO_000068: ncbiprotein

position:12969255:1
position: 12969255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13050210:1
position: 13050210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12969255-12969326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12974933-12974994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12981271-12981418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12982226-12982368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12988233-12988410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12998774-12999028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13001066-13001131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13004332-13004469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13005855-13006001:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13007709-13007793:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13007889-13007955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13008327-13008453:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13012527-13012703:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13015767-13015934:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13017384-13017546:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13020923-13020998:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13028174-13028234:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13028693-13028912:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13033587-13033741:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13035630-13035785:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13038884-13039083:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13040294-13040420:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13041770-13041871:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13044384-13044527:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13046955-13047113:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13048395-13048561:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13049536-13049730:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13050081-13050210:1:exon

HSPA13
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: HSPA13
note: heat shock protein family A (Hsp70) member 13; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13056438..13066759)
location: region:13056438-13066759:-1
so has part: feature:13056438-13066759:-1:exon
subclass of: SO_0000010

124231454
type: Gene
SIO_000068: ncbigene

position:13056438:-1
position: 13056438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13066759:-1
position: 13066759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13056438-13066759:-1:exon

HSPA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: HSPA13
product: heat shock protein family A (Hsp70) member 13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648256.1
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(13056438..13059691,13060659..13060826,13062410..13062623,13064824..13065164,13066696..13066759))
location: region:13056438-13066759:-1
so has part: feature:13066696-13066759:-1:exon
so has part: feature:13064824-13065164:-1:exon
so has part: feature:13062410-13062623:-1:exon
so has part: feature:13060659-13060826:-1:exon
so has part: feature:13056438-13059691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13066696-13066759:-1:exon

position:13066696:-1
position: 13066696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13064824-13065164:-1:exon

position:13064824:-1
position: 13064824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13065164:-1
position: 13065164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13062410-13062623:-1:exon

position:13062410:-1
position: 13062410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13062623:-1
position: 13062623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13060659-13060826:-1:exon

position:13060659:-1
position: 13060659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13060826:-1
position: 13060826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13056438-13059691:-1:exon

position:13059691:-1
position: 13059691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: HSPA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 13
translation: MAGEMTILGSAVLTLLLAGYLAQQYLPLPTPKVIGIDLGTTYCSVGVFFPGSGKVKVIPDENGHISIPSMVSFTDRDVFVGYESLELADSNPQNTIYDAKRFIGKIFTPEELEAEIGRYPFKVLNKNGMVEFSVTSNETITVSPEYVGSRLLLKLKEMAEEYLGMPVANAVISVPAEFDLKQRNSTIEAANLAGLKILRVINEPTAAAMAYGLHKADVFHVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQYLYKQIYETYGFLPSRKEEIHRLRQAVEMVKLNLTLHQSAQLSVLLTVEEKDRKEPQSTDTELPKDRLSPSDGHPMNNVFEAGLSEKKSGESQVLFETEISRKLFDSINEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFFGKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSALEIPNKHLQKTNFN
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(13059024..13059691,13060659..13060826,13062410..13062623,13064824..13065164,13066696..13066720))
location: region:13059024-13066720:-1
so has part: feature:13066696-13066720:-1:exon
so has part: feature:13064824-13065164:-1:exon
so has part: feature:13062410-13062623:-1:exon
so has part: feature:13060659-13060826:-1:exon
so has part: feature:13059024-13059691:-1:exon

XP_046504212.1
type: Protein
SIO_000068: ncbiprotein

position:13059024:-1
position: 13059024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13066720:-1
position: 13066720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13066696-13066720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13064824-13065164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13062410-13062623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13060659-13060826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13059024-13059691:-1:exon

SAMSN1
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: SAMSN1
note: SAM domain, SH3 domain and nuclear localization signals 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13148840..13280321)
location: region:13148840-13280321:-1
so has part: feature:13148840-13280321:-1:exon
subclass of: SO_0000010

124231258
type: Gene
SIO_000068: ncbigene

position:13148840:-1
position: 13148840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13280321:-1
position: 13280321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13148840-13280321:-1:exon

SAMSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: SAMSN1
product: SAM domain, SH3 domain and nuclear localization signals 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_046647940.1
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(13148840..13149713,13161466..13161616,13163545..13163751,13166826..13166977,13169231..13169357,13173448..13173597,13177361..13177432,13229190..13229542,13230750..13230876,13239971..13240037,13246850..13246931,13254250..13254336,13256097..13256134,13259097..13259134,13274811..13274939,13280187..13280321))
location: region:13148840-13280321:-1
so has part: feature:13280187-13280321:-1:exon
so has part: feature:13274811-13274939:-1:exon
so has part: feature:13259097-13259134:-1:exon
so has part: feature:13256097-13256134:-1:exon
so has part: feature:13254250-13254336:-1:exon
so has part: feature:13246850-13246931:-1:exon
so has part: feature:13239971-13240037:-1:exon
so has part: feature:13230750-13230876:-1:exon
so has part: feature:13229190-13229542:-1:exon
so has part: feature:13177361-13177432:-1:exon
so has part: feature:13173448-13173597:-1:exon
so has part: feature:13169231-13169357:-1:exon
so has part: feature:13166826-13166977:-1:exon
so has part: feature:13163545-13163751:-1:exon
so has part: feature:13161466-13161616:-1:exon
so has part: feature:13148840-13149713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13280187-13280321:-1:exon

position:13280187:-1
position: 13280187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13274811-13274939:-1:exon

position:13274811:-1
position: 13274811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13274939:-1
position: 13274939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13259097-13259134:-1:exon

position:13259097:-1
position: 13259097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13259134:-1
position: 13259134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13256097-13256134:-1:exon

position:13256097:-1
position: 13256097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13256134:-1
position: 13256134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13254250-13254336:-1:exon

position:13254250:-1
position: 13254250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13254336:-1
position: 13254336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13246850-13246931:-1:exon

position:13246850:-1
position: 13246850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13246931:-1
position: 13246931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13239971-13240037:-1:exon

position:13239971:-1
position: 13239971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13240037:-1
position: 13240037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13230750-13230876:-1:exon

position:13230750:-1
position: 13230750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13230876:-1
position: 13230876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13229190-13229542:-1:exon

position:13229190:-1
position: 13229190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13229542:-1
position: 13229542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13177361-13177432:-1:exon

position:13177361:-1
position: 13177361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13177432:-1
position: 13177432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13173448-13173597:-1:exon

position:13173448:-1
position: 13173448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13173597:-1
position: 13173597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13169231-13169357:-1:exon

position:13169231:-1
position: 13169231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13169357:-1
position: 13169357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13166826-13166977:-1:exon

position:13166826:-1
position: 13166826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13166977:-1
position: 13166977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13163545-13163751:-1:exon

position:13163545:-1
position: 13163545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13163751:-1
position: 13163751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13161466-13161616:-1:exon

position:13161466:-1
position: 13161466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13161616:-1
position: 13161616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13148840-13149713:-1:exon

position:13149713:-1
position: 13149713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: SAMSN1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(13280244..13280246), aa:OTHER)
product: LOW QUALITY PROTEIN: SAM domain-containing protein SAMSN-1
translation: MRTVQTTVKARESCEGQSYSXKHGNRGLKLTIMNLFCFSLEGSMDSLYEPVPEQQTNQESASGRAAPLSCFEESGKTRSNLFMEVSNFEKAKPKRKSIQRSMSENKVFEGKTVNDTLWQEPSKPENDSHIRRLCQLEDVSEDDDFLLSNNIQTLQGKRLQGISHQVTFECWSASYCQRHVKPTASEIAIRPGGDPVESMGTLKRLQKLVWTKKARVPSLDETKPTLINLQDEDETLISCMKLAKSQERKVNNVGTRRKEEVEIRLDSISASLVRSSTSAGCSLAEMLSYNEGEIPMWNSWKPFPENPLWTCVDFQIAQVAPWDNCFRCTHHPRLKSSGTDMDLPHSWRSSSFGNFDRFRNNTVSKPEDSAEVYEGEAICESGEQNKTSNNGGSLGKKMRAISWTMKRRVAKKYIKALSEEKGEEDGEDVLPYRNSDPVIGTHAEISLKTSDSMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYSGPFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGMWTGMLNNKVGNFKFIYVDVISEEEAAPKKIKAHRRSEREKSKTLQEFLERIQLQEYASTLLLNGYETVEDLKDITESHLIELNIKNPEDRMRLLSAAENLLEEETIQEEEDESVPLTLRPDISLNKSQLDDCPRDSGCYISSENSDNGKEDPESENLSDLVQKITITEPSD
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(13149511..13149713,13161466..13161616,13163545..13163751,13166826..13166977,13169231..13169357,13173448..13173597,13177361..13177432,13229190..13229542,13230750..13230876,13239971..13240037,13246850..13246931,13254250..13254336,13256097..13256134,13259097..13259134,13274811..13274939,13280187..13280306))
location: region:13149511-13280306:-1
so has part: feature:13280187-13280306:-1:exon
so has part: feature:13274811-13274939:-1:exon
so has part: feature:13259097-13259134:-1:exon
so has part: feature:13256097-13256134:-1:exon
so has part: feature:13254250-13254336:-1:exon
so has part: feature:13246850-13246931:-1:exon
so has part: feature:13239971-13240037:-1:exon
so has part: feature:13230750-13230876:-1:exon
so has part: feature:13229190-13229542:-1:exon
so has part: feature:13177361-13177432:-1:exon
so has part: feature:13173448-13173597:-1:exon
so has part: feature:13169231-13169357:-1:exon
so has part: feature:13166826-13166977:-1:exon
so has part: feature:13163545-13163751:-1:exon
so has part: feature:13161466-13161616:-1:exon
so has part: feature:13149511-13149713:-1:exon

XP_046503896.1
type: Protein
SIO_000068: ncbiprotein

position:13149511:-1
position: 13149511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13280306:-1
position: 13280306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13280187-13280306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13274811-13274939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13259097-13259134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13256097-13256134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13254250-13254336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13246850-13246931:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13239971-13240037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13230750-13230876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13229190-13229542:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13177361-13177432:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13173448-13173597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13169231-13169357:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13166826-13166977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13163545-13163751:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13161466-13161616:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13149511-13149713:-1:exon

LOC124231434
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231434
note: glyceraldehyde-3-phosphate dehydrogenase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 13376411..13377316
location: region:13376411-13377316:1
so has part: feature:13376411-13377316:1:exon

124231434
type: Gene
SIO_000068: ncbigene

position:13376411:1
position: 13376411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13377316:1
position: 13377316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13376411-13377316:1:exon

LOC124231434
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231434
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC124231434
subclass of: SO_0000673
so part of: LOC124231434
location: 13376411..13376697
location: region:13376411-13376697:1
so has part: feature:13376411-13376697:1:exon

position:13376697:1
position: 13376697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13376411-13376697:1:exon

LOC124231434
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231434
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC124231434
subclass of: SO_0000673
so part of: LOC124231434
location: 13376730..13377316
location: region:13376730-13377316:1
so has part: feature:13376730-13377316:1:exon

position:13376730:1
position: 13376730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13376730-13377316:1:exon

LOC124231527
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231527
note: RNA-binding motif protein, X-linked 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13405725..13412207)
location: region:13405725-13412207:-1
so has part: feature:13405725-13412207:-1:exon

124231527
type: Gene
SIO_000068: ncbigene

position:13405725:-1
position: 13405725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13412207:-1
position: 13412207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13405725-13412207:-1:exon

LOC124231527
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231527
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231527
subclass of: SO_0000673
so part of: LOC124231527
location: complement(13405725..13406690)
location: region:13405725-13406690:-1
so has part: feature:13405725-13406690:-1:exon

position:13406690:-1
position: 13406690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13405725-13406690:-1:exon

LOC124231527
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231527
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231527
subclass of: SO_0000673
so part of: LOC124231527
location: complement(13410384..13410462)
location: region:13410384-13410462:-1
so has part: feature:13410384-13410462:-1:exon

position:13410384:-1
position: 13410384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13410462:-1
position: 13410462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13410384-13410462:-1:exon

LOC124231527
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231527
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231527
subclass of: SO_0000673
so part of: LOC124231527
location: complement(13412039..13412207)
location: region:13412039-13412207:-1
so has part: feature:13412039-13412207:-1:exon

position:13412039:-1
position: 13412039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13412039-13412207:-1:exon

LOC124231435
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231435
note: uncharacterized LOC124231435; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13433948..13441552)
location: region:13433948-13441552:-1
so has part: feature:13433948-13441552:-1:exon
subclass of: SO_0000011

124231435
type: Gene
SIO_000068: ncbigene

position:13433948:-1
position: 13433948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13441552:-1
position: 13441552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13433948-13441552:-1:exon

LOC124231435
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231435
product: uncharacterized LOC124231435
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886519.1
SIO_010081: LOC124231435
subclass of: SO_0000673
so part of: LOC124231435
location: complement(join(13433948..13434028,13440912..13441063,13441463..13441552))
location: region:13433948-13441552:-1
so has part: feature:13441463-13441552:-1:exon
so has part: feature:13440912-13441063:-1:exon
so has part: feature:13433948-13434028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13441463-13441552:-1:exon

position:13441463:-1
position: 13441463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13440912-13441063:-1:exon

position:13440912:-1
position: 13440912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13441063:-1
position: 13441063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13433948-13434028:-1:exon

position:13434028:-1
position: 13434028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: NRIP1
note: nuclear receptor interacting protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13504105..13597310)
location: region:13504105-13597310:-1
so has part: feature:13504105-13597310:-1:exon
subclass of: SO_0000010

124231319
type: Gene
SIO_000068: ncbigene

position:13504105:-1
position: 13504105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13597310:-1
position: 13597310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13504105-13597310:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648048.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(13504105..13511374,13577617..13577698,13597000..13597310))
location: region:13504105-13597310:-1
so has part: feature:13597000-13597310:-1:exon
so has part: feature:13577617-13577698:-1:exon
so has part: feature:13504105-13511374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13597000-13597310:-1:exon

position:13597000:-1
position: 13597000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13577617-13577698:-1:exon

position:13577617:-1
position: 13577617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13577698:-1
position: 13577698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13504105-13511374:-1:exon

position:13511374:-1
position: 13511374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648047.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(13504105..13511374,13549886..13550000,13577617..13577698,13597000..13597310))
location: region:13504105-13597310:-1
so has part: feature:13597000-13597310:-1:exon
so has part: feature:13577617-13577698:-1:exon
so has part: feature:13549886-13550000:-1:exon
so has part: feature:13504105-13511374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13597000-13597310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13577617-13577698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13549886-13550000:-1:exon

position:13549886:-1
position: 13549886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13550000:-1
position: 13550000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13504105-13511374:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648044.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(13504105..13511374,13549886..13550000,13553233..13553340,13577617..13577698,13597000..13597310))
location: region:13504105-13597310:-1
so has part: feature:13597000-13597310:-1:exon
so has part: feature:13577617-13577698:-1:exon
so has part: feature:13553233-13553340:-1:exon
so has part: feature:13549886-13550000:-1:exon
so has part: feature:13504105-13511374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13597000-13597310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13577617-13577698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13553233-13553340:-1:exon

position:13553233:-1
position: 13553233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13553340:-1
position: 13553340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13549886-13550000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13504105-13511374:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648046.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(13504105..13511374,13549886..13550000,13553233..13553340,13564863..13564925,13577617..13577698,13597000..13597310))
location: region:13504105-13597310:-1
so has part: feature:13597000-13597310:-1:exon
so has part: feature:13577617-13577698:-1:exon
so has part: feature:13564863-13564925:-1:exon
so has part: feature:13553233-13553340:-1:exon
so has part: feature:13549886-13550000:-1:exon
so has part: feature:13504105-13511374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13597000-13597310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13577617-13577698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13564863-13564925:-1:exon

position:13564863:-1
position: 13564863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13564925:-1
position: 13564925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13553233-13553340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13549886-13550000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13504105-13511374:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648045.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(13504105..13511374,13549886..13550000,13553233..13553340,13577617..13577698,13595290..13595381))
location: region:13504105-13595381:-1
so has part: feature:13595290-13595381:-1:exon
so has part: feature:13577617-13577698:-1:exon
so has part: feature:13553233-13553340:-1:exon
so has part: feature:13549886-13550000:-1:exon
so has part: feature:13504105-13511374:-1:exon

position:13595381:-1
position: 13595381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13595290-13595381:-1:exon

position:13595290:-1
position: 13595290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13577617-13577698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13553233-13553340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13549886-13550000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13504105-13511374:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSVVLTYLEGLLMHQAAEGSGTAVDKKSAGRNEEDQNFNVSSKAFPTCQSNGPVLNTQTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDPIVNINVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTDLPDVTKNLIRERFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSSHLNGQARTSSSKLMASRSTFQNAMGIVPSSPKNAGCKNSLERNNIKQVANNSLLLHLLKSQTIPKPMNGHNHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKPEPDQPVSLDNLTQSLLNTWDPKARDVDSKEDPDTSKKSKLNSHQKVTLLQLLLGHKNEENTERNNSPQEVHSDVTKFSTQNYTRTSVIESPSTNRTTPVSTPPLLASTKAESPINLSQHSLVIKWNSPPYACSSQPEKPANTASNHLMDLTKSKESQGEKPAQNEGAQNPATFSASKLLQNLAQCGMQSSVSGEEQRPSKQLLGVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQATCPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKNLLRDESTQEHTDRALNEQILMVKIKSEPCDELHIHNTNVHLSHDAKGAPFLGMAPPVQRSAAALPASEDFKSEPISPQDFSFSKNGLLSRLLRQNQESYLADDLDNSPRNSQLTLVESKNLCMVPKKRKLYTEPLENPFKKMKNNLVDATNSHSAPDVLYGSLLNQQELKFSRNDLEFKYPASHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSQHGSNSVVDSKKKGHKNNVPSSKPEFSISSLNGLMYGSTQPNACVDNRTFPYPGVVKTALSPPFPEYLGCAGSRPESGLLNGCSMPSEKGPIKWVITDGDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQSRDMWREPSSADSVSQVTIKEQLLPAAETKASFFNLRSPYNSHMGNNASRPHSANGEGYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(13507562..13511029)
location: region:13507562-13511029:-1
so has part: feature:13507562-13511029:-1:exon

XP_046504000.1
type: Protein
SIO_000068: ncbiprotein

position:13507562:-1
position: 13507562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13511029:-1
position: 13511029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13507562-13511029:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSVVLTYLEGLLMHQAAEGSGTAVDKKSAGRNEEDQNFNVSSKAFPTCQSNGPVLNTQTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDPIVNINVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTDLPDVTKNLIRERFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSSHLNGQARTSSSKLMASRSTFQNAMGIVPSSPKNAGCKNSLERNNIKQVANNSLLLHLLKSQTIPKPMNGHNHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKPEPDQPVSLDNLTQSLLNTWDPKARDVDSKEDPDTSKKSKLNSHQKVTLLQLLLGHKNEENTERNNSPQEVHSDVTKFSTQNYTRTSVIESPSTNRTTPVSTPPLLASTKAESPINLSQHSLVIKWNSPPYACSSQPEKPANTASNHLMDLTKSKESQGEKPAQNEGAQNPATFSASKLLQNLAQCGMQSSVSGEEQRPSKQLLGVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQATCPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKNLLRDESTQEHTDRALNEQILMVKIKSEPCDELHIHNTNVHLSHDAKGAPFLGMAPPVQRSAAALPASEDFKSEPISPQDFSFSKNGLLSRLLRQNQESYLADDLDNSPRNSQLTLVESKNLCMVPKKRKLYTEPLENPFKKMKNNLVDATNSHSAPDVLYGSLLNQQELKFSRNDLEFKYPASHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSQHGSNSVVDSKKKGHKNNVPSSKPEFSISSLNGLMYGSTQPNACVDNRTFPYPGVVKTALSPPFPEYLGCAGSRPESGLLNGCSMPSEKGPIKWVITDGDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQSRDMWREPSSADSVSQVTIKEQLLPAAETKASFFNLRSPYNSHMGNNASRPHSANGEGYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(13507562..13511029)
location: region:13507562-13511029:-1
so has part: feature:13507562-13511029:-1:exon

XP_046504001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13507562-13511029:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSVVLTYLEGLLMHQAAEGSGTAVDKKSAGRNEEDQNFNVSSKAFPTCQSNGPVLNTQTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDPIVNINVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTDLPDVTKNLIRERFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSSHLNGQARTSSSKLMASRSTFQNAMGIVPSSPKNAGCKNSLERNNIKQVANNSLLLHLLKSQTIPKPMNGHNHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKPEPDQPVSLDNLTQSLLNTWDPKARDVDSKEDPDTSKKSKLNSHQKVTLLQLLLGHKNEENTERNNSPQEVHSDVTKFSTQNYTRTSVIESPSTNRTTPVSTPPLLASTKAESPINLSQHSLVIKWNSPPYACSSQPEKPANTASNHLMDLTKSKESQGEKPAQNEGAQNPATFSASKLLQNLAQCGMQSSVSGEEQRPSKQLLGVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQATCPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKNLLRDESTQEHTDRALNEQILMVKIKSEPCDELHIHNTNVHLSHDAKGAPFLGMAPPVQRSAAALPASEDFKSEPISPQDFSFSKNGLLSRLLRQNQESYLADDLDNSPRNSQLTLVESKNLCMVPKKRKLYTEPLENPFKKMKNNLVDATNSHSAPDVLYGSLLNQQELKFSRNDLEFKYPASHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSQHGSNSVVDSKKKGHKNNVPSSKPEFSISSLNGLMYGSTQPNACVDNRTFPYPGVVKTALSPPFPEYLGCAGSRPESGLLNGCSMPSEKGPIKWVITDGDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQSRDMWREPSSADSVSQVTIKEQLLPAAETKASFFNLRSPYNSHMGNNASRPHSANGEGYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(13507562..13511029)
location: region:13507562-13511029:-1
so has part: feature:13507562-13511029:-1:exon

XP_046504002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13507562-13511029:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSVVLTYLEGLLMHQAAEGSGTAVDKKSAGRNEEDQNFNVSSKAFPTCQSNGPVLNTQTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDPIVNINVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTDLPDVTKNLIRERFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSSHLNGQARTSSSKLMASRSTFQNAMGIVPSSPKNAGCKNSLERNNIKQVANNSLLLHLLKSQTIPKPMNGHNHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKPEPDQPVSLDNLTQSLLNTWDPKARDVDSKEDPDTSKKSKLNSHQKVTLLQLLLGHKNEENTERNNSPQEVHSDVTKFSTQNYTRTSVIESPSTNRTTPVSTPPLLASTKAESPINLSQHSLVIKWNSPPYACSSQPEKPANTASNHLMDLTKSKESQGEKPAQNEGAQNPATFSASKLLQNLAQCGMQSSVSGEEQRPSKQLLGVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQATCPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKNLLRDESTQEHTDRALNEQILMVKIKSEPCDELHIHNTNVHLSHDAKGAPFLGMAPPVQRSAAALPASEDFKSEPISPQDFSFSKNGLLSRLLRQNQESYLADDLDNSPRNSQLTLVESKNLCMVPKKRKLYTEPLENPFKKMKNNLVDATNSHSAPDVLYGSLLNQQELKFSRNDLEFKYPASHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSQHGSNSVVDSKKKGHKNNVPSSKPEFSISSLNGLMYGSTQPNACVDNRTFPYPGVVKTALSPPFPEYLGCAGSRPESGLLNGCSMPSEKGPIKWVITDGDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQSRDMWREPSSADSVSQVTIKEQLLPAAETKASFFNLRSPYNSHMGNNASRPHSANGEGYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(13507562..13511029)
location: region:13507562-13511029:-1
so has part: feature:13507562-13511029:-1:exon

XP_046504003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13507562-13511029:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSVVLTYLEGLLMHQAAEGSGTAVDKKSAGRNEEDQNFNVSSKAFPTCQSNGPVLNTQTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDPIVNINVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTDLPDVTKNLIRERFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSSHLNGQARTSSSKLMASRSTFQNAMGIVPSSPKNAGCKNSLERNNIKQVANNSLLLHLLKSQTIPKPMNGHNHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKPEPDQPVSLDNLTQSLLNTWDPKARDVDSKEDPDTSKKSKLNSHQKVTLLQLLLGHKNEENTERNNSPQEVHSDVTKFSTQNYTRTSVIESPSTNRTTPVSTPPLLASTKAESPINLSQHSLVIKWNSPPYACSSQPEKPANTASNHLMDLTKSKESQGEKPAQNEGAQNPATFSASKLLQNLAQCGMQSSVSGEEQRPSKQLLGVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQATCPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKNLLRDESTQEHTDRALNEQILMVKIKSEPCDELHIHNTNVHLSHDAKGAPFLGMAPPVQRSAAALPASEDFKSEPISPQDFSFSKNGLLSRLLRQNQESYLADDLDNSPRNSQLTLVESKNLCMVPKKRKLYTEPLENPFKKMKNNLVDATNSHSAPDVLYGSLLNQQELKFSRNDLEFKYPASHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSQHGSNSVVDSKKKGHKNNVPSSKPEFSISSLNGLMYGSTQPNACVDNRTFPYPGVVKTALSPPFPEYLGCAGSRPESGLLNGCSMPSEKGPIKWVITDGDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQSRDMWREPSSADSVSQVTIKEQLLPAAETKASFFNLRSPYNSHMGNNASRPHSANGEGYGLLGSVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(13507562..13511029)
location: region:13507562-13511029:-1
so has part: feature:13507562-13511029:-1:exon

XP_046504004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13507562-13511029:-1:exon

LOC124231304
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231304
note: uncharacterized LOC124231304; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13766109..13805771
location: region:13766109-13805771:1
so has part: feature:13766109-13805771:1:exon
subclass of: SO_0000011

124231304
type: Gene
SIO_000068: ncbigene

position:13766109:1
position: 13766109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13805771:1
position: 13805771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13766109-13805771:1:exon

LOC124231304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231304
product: uncharacterized LOC124231304
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886486.1
SIO_010081: LOC124231304
subclass of: SO_0000673
so part of: LOC124231304
location: join(13766109..13766173,13776850..13776950,13805694..13805771)
location: region:13766109-13805771:1
so has part: feature:13766109-13766173:1:exon
so has part: feature:13776850-13776950:1:exon
so has part: feature:13805694-13805771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13766109-13766173:1:exon

position:13766173:1
position: 13766173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13776850-13776950:1:exon

position:13776850:1
position: 13776850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13776950:1
position: 13776950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13805694-13805771:1:exon

position:13805694:1
position: 13805694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP25
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: USP25
note: ubiquitin specific peptidase 25; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14237915..14363548
location: region:14237915-14363548:1
so has part: feature:14237915-14363548:1:exon
subclass of: SO_0000010

124231335
type: Gene
SIO_000068: ncbigene

position:14237915:1
position: 14237915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14363548:1
position: 14363548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14237915-14363548:1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: USP25
product: ubiquitin specific peptidase 25, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648081.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14237915..14237924,14245538..14245615,14248888..14249032,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14334356..14334469,14336556..14336651,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14363548)
location: region:14237915-14363548:1
so has part: feature:14237915-14237924:1:exon
so has part: feature:14245538-14245615:1:exon
so has part: feature:14248888-14249032:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14334356-14334469:1:exon
so has part: feature:14336556-14336651:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14363548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14237915-14237924:1:exon

position:14237924:1
position: 14237924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14245538-14245615:1:exon

position:14245538:1
position: 14245538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14245615:1
position: 14245615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14248888-14249032:1:exon

position:14248888:1
position: 14248888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14249032:1
position: 14249032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14284423-14284509:1:exon

position:14284423:1
position: 14284423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14284509:1
position: 14284509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14289780-14289917:1:exon

position:14289780:1
position: 14289780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14289917:1
position: 14289917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14293575-14293651:1:exon

position:14293575:1
position: 14293575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14293651:1
position: 14293651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14304627-14304700:1:exon

position:14304627:1
position: 14304627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14304700:1
position: 14304700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14309262-14309410:1:exon

position:14309262:1
position: 14309262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14309410:1
position: 14309410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14314749-14314876:1:exon

position:14314749:1
position: 14314749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14314876:1
position: 14314876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14315270-14315365:1:exon

position:14315270:1
position: 14315270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14315365:1
position: 14315365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14316510-14316671:1:exon

position:14316510:1
position: 14316510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14316671:1
position: 14316671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14317301-14317527:1:exon

position:14317301:1
position: 14317301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14317527:1
position: 14317527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14319138-14319208:1:exon

position:14319138:1
position: 14319138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14319208:1
position: 14319208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:14319921-14320149:1:exon

position:14319921:1
position: 14319921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14320149:1
position: 14320149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14321550-14321750:1:exon

position:14321550:1
position: 14321550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14321750:1
position: 14321750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14329656-14329795:1:exon

position:14329656:1
position: 14329656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14329795:1
position: 14329795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:14334356-14334469:1:exon

position:14334356:1
position: 14334356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14334469:1
position: 14334469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:14336556-14336651:1:exon

position:14336556:1
position: 14336556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14336651:1
position: 14336651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:14347650-14347828:1:exon

position:14347650:1
position: 14347650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14347828:1
position: 14347828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:14349657-14349735:1:exon

position:14349657:1
position: 14349657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14349735:1
position: 14349735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:14352658-14352737:1:exon

position:14352658:1
position: 14352658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14352737:1
position: 14352737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:14356407-14356530:1:exon

position:14356407:1
position: 14356407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14356530:1
position: 14356530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:14360446-14360641:1:exon

position:14360446:1
position: 14360446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14360641:1
position: 14360641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:14360963-14363548:1:exon

position:14360963:1
position: 14360963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: USP25
product: ubiquitin specific peptidase 25, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648084.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14237915..14237924,14245538..14245615,14248888..14249032,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14363548)
location: region:14237915-14363548:1
so has part: feature:14237915-14237924:1:exon
so has part: feature:14245538-14245615:1:exon
so has part: feature:14248888-14249032:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14363548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14237915-14237924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14245538-14245615:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14248888-14249032:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14360963-14363548:1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: USP25
product: ubiquitin specific peptidase 25, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648082.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14245546..14245615,14248893..14249032,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14334356..14334469,14336556..14336651,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14363548)
location: region:14245546-14363548:1
so has part: feature:14245546-14245615:1:exon
so has part: feature:14248893-14249032:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14334356-14334469:1:exon
so has part: feature:14336556-14336651:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14363548:1:exon

position:14245546:1
position: 14245546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14245546-14245615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14248893-14249032:1:exon

position:14248893:1
position: 14248893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14334356-14334469:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14336556-14336651:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14360963-14363548:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: USP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X1
translation: METWSWQWLSSLRRMPRPLSRRRQLTTKPHFLAMIDTSVWEAKQMRSLFNLLEFRRLVLNYKPPSHAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMLRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPIDDIDASSPPSGSVSSQTLPSTTEQQGTPSSELPSTSPASVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHHENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQALVGIETLPPDLRDFVEEDNQRFEKELEEWDTQLAQKALQEKLLASQKLRESESSITAAQAGEPEYLEQPSRSDFSKHLKEETVRLITKASHEHEDKSPETVLQSKPENTTSQPPSTQQVVEVAIPHVGKFMIEAKEGGYDDEIMMTPNMQGIIMAIGKSRNVYDRCGPEAGFFKAIKLEYSRLVKLSQEDTPPETDYRLHHVVVYFIQNEAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLEYFQGERYIDSLLFLIYAYQNNKELLSKGQYRGHDEELLSHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNELIVPVLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKGFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14248895..14249032,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14334356..14334469,14336556..14336651,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14361135)
location: region:14248895-14361135:1
so has part: feature:14248895-14249032:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14334356-14334469:1:exon
so has part: feature:14336556-14336651:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14361135:1:exon

XP_046504037.1
type: Protein
SIO_000068: ncbiprotein

position:14248895:1
position: 14248895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14361135:1
position: 14361135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14248895-14249032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14334356-14334469:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14336556-14336651:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14360963-14361135:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: USP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X1
translation: METWSWQWLSSLRRMPRPLSRRRQLTTKPHFLAMIDTSVWEAKQMRSLFNLLEFRRLVLNYKPPSHAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMLRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPIDDIDASSPPSGSVSSQTLPSTTEQQGTPSSELPSTSPASVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHHENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQALVGIETLPPDLRDFVEEDNQRFEKELEEWDTQLAQKALQEKLLASQKLRESESSITAAQAGEPEYLEQPSRSDFSKHLKEETVRLITKASHEHEDKSPETVLQSKPENTTSQPPSTQQVVEVAIPHVGKFMIEAKEGGYDDEIMMTPNMQGIIMAIGKSRNVYDRCGPEAGFFKAIKLEYSRLVKLSQEDTPPETDYRLHHVVVYFIQNEAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLEYFQGERYIDSLLFLIYAYQNNKELLSKGQYRGHDEELLSHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNELIVPVLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKGFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14248895..14249032,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14334356..14334469,14336556..14336651,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14361135)
location: region:14248895-14361135:1
so has part: feature:14248895-14249032:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14334356-14334469:1:exon
so has part: feature:14336556-14336651:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14361135:1:exon

XP_046504038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14248895-14249032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14334356-14334469:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14336556-14336651:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14360963-14361135:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: USP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X3
translation: METWSWQWLSSLRRMPRPLSRRRQLTTKPHFLAMIDTSVWEAKQMRSLFNLLEFRRLVLNYKPPSHAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMLRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPIDDIDASSPPSGSVSSQTLPSTTEQQGTPSSELPSTSPASVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHHENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQALVGIETLPPDLRDFVEEDNQRFEKELEEWDTQLAQKALQEKLLASQKLRESESSITAAQAGEPEYLEQPSRSDFSKHLKEETVRLITKASHEHEDKSPETVLQSAIKLEYSRLVKLSQEDTPPETDYRLHHVVVYFIQNEAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLEYFQGERYIDSLLFLIYAYQNNKELLSKGQYRGHDEELLSHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNELIVPVLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKGFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14248895..14249032,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14361135)
location: region:14248895-14361135:1
so has part: feature:14248895-14249032:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14361135:1:exon

XP_046504040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14248895-14249032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14360963-14361135:1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: USP25
product: ubiquitin specific peptidase 25, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648083.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14259516..14259575,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14334356..14334469,14336556..14336651,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14363548)
location: region:14259516-14363548:1
so has part: feature:14259516-14259575:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14334356-14334469:1:exon
so has part: feature:14336556-14336651:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14363548:1:exon

position:14259516:1
position: 14259516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14259516-14259575:1:exon

position:14259575:1
position: 14259575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14334356-14334469:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14336556-14336651:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14360963-14363548:1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: USP25
product: ubiquitin specific peptidase 25, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648086.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14259516..14259575,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14363548)
location: region:14259516-14363548:1
so has part: feature:14259516-14259575:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14363548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14259516-14259575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14360963-14363548:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: USP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X2
translation: MDQKIRGIWSLFNLLEFRRLVLNYKPPSHAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMLRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPIDDIDASSPPSGSVSSQTLPSTTEQQGTPSSELPSTSPASVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHHENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQALVGIETLPPDLRDFVEEDNQRFEKELEEWDTQLAQKALQEKLLASQKLRESESSITAAQAGEPEYLEQPSRSDFSKHLKEETVRLITKASHEHEDKSPETVLQSKPENTTSQPPSTQQVVEVAIPHVGKFMIEAKEGGYDDEIMMTPNMQGIIMAIGKSRNVYDRCGPEAGFFKAIKLEYSRLVKLSQEDTPPETDYRLHHVVVYFIQNEAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLEYFQGERYIDSLLFLIYAYQNNKELLSKGQYRGHDEELLSHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNELIVPVLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKGFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14259549..14259575,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14334356..14334469,14336556..14336651,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14361135)
location: region:14259549-14361135:1
so has part: feature:14259549-14259575:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14334356-14334469:1:exon
so has part: feature:14336556-14336651:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14361135:1:exon

XP_046504039.1
type: Protein
SIO_000068: ncbiprotein

position:14259549:1
position: 14259549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14259549-14259575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14334356-14334469:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14336556-14336651:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14360963-14361135:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: USP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X5
translation: MDQKIRGIWSLFNLLEFRRLVLNYKPPSHAQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMLRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPIDDIDASSPPSGSVSSQTLPSTTEQQGTPSSELPSTSPASVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHHENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQALVGIETLPPDLRDFVEEDNQRFEKELEEWDTQLAQKALQEKLLASQKLRESESSITAAQAGEPEYLEQPSRSDFSKHLKEETVRLITKASHEHEDKSPETVLQSAIKLEYSRLVKLSQEDTPPETDYRLHHVVVYFIQNEAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLEYFQGERYIDSLLFLIYAYQNNKELLSKGQYRGHDEELLSHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNELIVPVLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKGFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14259549..14259575,14284423..14284509,14289780..14289917,14293575..14293651,14304627..14304700,14309262..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14361135)
location: region:14259549-14361135:1
so has part: feature:14259549-14259575:1:exon
so has part: feature:14284423-14284509:1:exon
so has part: feature:14289780-14289917:1:exon
so has part: feature:14293575-14293651:1:exon
so has part: feature:14304627-14304700:1:exon
so has part: feature:14309262-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14361135:1:exon

XP_046504042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14259549-14259575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14284423-14284509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14289780-14289917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14293575-14293651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14304627-14304700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14309262-14309410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14360963-14361135:1:exon

USP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: USP25
product: ubiquitin specific peptidase 25, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648085.1
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14304627..14304703,14309264..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14334356..14334469,14336556..14336651,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14363548)
location: region:14304627-14363548:1
so has part: feature:14304627-14304703:1:exon
so has part: feature:14309264-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14334356-14334469:1:exon
so has part: feature:14336556-14336651:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14363548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14304627-14304703:1:exon

position:14304703:1
position: 14304703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14309264-14309410:1:exon

position:14309264:1
position: 14309264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14334356-14334469:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14336556-14336651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14360963-14363548:1:exon

USP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: USP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X4
translation: MFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMLRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPIDDIDASSPPSGSVSSQTLPSTTEQQGTPSSELPSTSPASVAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHHENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQALVGIETLPPDLRDFVEEDNQRFEKELEEWDTQLAQKALQEKLLASQKLRESESSITAAQAGEPEYLEQPSRSDFSKHLKEETVRLITKASHEHEDKSPETVLQSKPENTTSQPPSTQQVVEVAIPHVGKFMIEAKEGGYDDEIMMTPNMQGIIMAIGKSRNVYDRCGPEAGFFKAIKLEYSRLVKLSQEDTPPETDYRLHHVVVYFIQNEAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKPEEVNLEEYEEWHQDYRKFRETTMYLIIGLEYFQGERYIDSLLFLIYAYQNNKELLSKGQYRGHDEELLSHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNELIVPVLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKGFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR
SIO_010081: USP25
subclass of: SO_0000673
so part of: USP25
location: join(14309285..14309410,14314749..14314876,14315270..14315365,14316510..14316671,14317301..14317527,14319138..14319208,14319921..14320149,14321550..14321750,14329656..14329795,14334356..14334469,14336556..14336651,14347650..14347828,14349657..14349735,14352658..14352737,14356407..14356530,14360446..14360641,14360963..14361135)
location: region:14309285-14361135:1
so has part: feature:14309285-14309410:1:exon
so has part: feature:14314749-14314876:1:exon
so has part: feature:14315270-14315365:1:exon
so has part: feature:14316510-14316671:1:exon
so has part: feature:14317301-14317527:1:exon
so has part: feature:14319138-14319208:1:exon
so has part: feature:14319921-14320149:1:exon
so has part: feature:14321550-14321750:1:exon
so has part: feature:14329656-14329795:1:exon
so has part: feature:14334356-14334469:1:exon
so has part: feature:14336556-14336651:1:exon
so has part: feature:14347650-14347828:1:exon
so has part: feature:14349657-14349735:1:exon
so has part: feature:14352658-14352737:1:exon
so has part: feature:14356407-14356530:1:exon
so has part: feature:14360446-14360641:1:exon
so has part: feature:14360963-14361135:1:exon

XP_046504041.1
type: Protein
SIO_000068: ncbiprotein

position:14309285:1
position: 14309285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14309285-14309410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14314749-14314876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14315270-14315365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14316510-14316671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14317301-14317527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14319138-14319208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14319921-14320149:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14321550-14321750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14329656-14329795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14334356-14334469:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14336556-14336651:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14347650-14347828:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14349657-14349735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14352658-14352737:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14356407-14356530:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14360446-14360641:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14360963-14361135:1:exon

LOC124231504
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231504
note: uncharacterized LOC124231504; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14430206..14431580
location: region:14430206-14431580:1
so has part: feature:14430206-14431580:1:exon
subclass of: SO_0000011

124231504
type: Gene
SIO_000068: ncbigene

position:14430206:1
position: 14430206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14431580:1
position: 14431580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14430206-14431580:1:exon

LOC124231504
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231504
product: uncharacterized LOC124231504
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006886578.1
SIO_010081: LOC124231504
subclass of: SO_0000673
so part of: LOC124231504
location: join(14430206..14430287,14431037..14431219,14431295..14431580)
location: region:14430206-14431580:1
so has part: feature:14430206-14430287:1:exon
so has part: feature:14431037-14431219:1:exon
so has part: feature:14431295-14431580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14430206-14430287:1:exon

position:14430287:1
position: 14430287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14431037-14431219:1:exon

position:14431037:1
position: 14431037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14431219:1
position: 14431219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14431295-14431580:1:exon

position:14431295:1
position: 14431295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124231438
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231438
note: uncharacterized LOC124231438; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14431875..14436497
location: region:14431875-14436497:1
so has part: feature:14431875-14436497:1:exon
subclass of: SO_0000011

124231438
type: Gene
SIO_000068: ncbigene

position:14431875:1
position: 14431875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14436497:1
position: 14436497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14431875-14436497:1:exon

LOC124231438
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231438
product: uncharacterized LOC124231438
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006886521.1
SIO_010081: LOC124231438
subclass of: SO_0000673
so part of: LOC124231438
location: join(14431875..14433004,14434202..14434246,14434498..14434752,14435457..14436497)
location: region:14431875-14436497:1
so has part: feature:14431875-14433004:1:exon
so has part: feature:14434202-14434246:1:exon
so has part: feature:14434498-14434752:1:exon
so has part: feature:14435457-14436497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14431875-14433004:1:exon

position:14433004:1
position: 14433004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14434202-14434246:1:exon

position:14434202:1
position: 14434202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14434246:1
position: 14434246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14434498-14434752:1:exon

position:14434498:1
position: 14434498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14434752:1
position: 14434752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14435457-14436497:1:exon

position:14435457:1
position: 14435457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124231572
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231572
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 15106113..15106215
location: region:15106113-15106215:1
so has part: feature:15106113-15106215:1:exon
subclass of: SO_0000623

124231572
type: Gene
SIO_000068: ncbigene

position:15106113:1
position: 15106113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15106215:1
position: 15106215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15106113-15106215:1:exon

LOC124231572
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: snRNA
gene: LOC124231572
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006886598.1
SIO_010081: LOC124231572
subclass of: SO_0000673
so part of: LOC124231572
location: 15106113..15106215
location: region:15106113-15106215:1
so has part: feature:15106113-15106215:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15106113-15106215:1:exon

LOC124231531
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231531
note: acylpyruvase FAHD1, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 15525562..15527156
location: region:15525562-15527156:1
so has part: feature:15525562-15527156:1:exon

124231531
type: Gene
SIO_000068: ncbigene

position:15525562:1
position: 15525562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15527156:1
position: 15527156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15525562-15527156:1:exon

LOC124231531
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231531
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC124231531
subclass of: SO_0000673
so part of: LOC124231531
location: 15525562..15525588
location: region:15525562-15525588:1
so has part: feature:15525562-15525588:1:exon

position:15525588:1
position: 15525588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15525562-15525588:1:exon

LOC124231531
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231531
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC124231531
subclass of: SO_0000673
so part of: LOC124231531
location: 15526544..15527156
location: region:15526544-15527156:1
so has part: feature:15526544-15527156:1:exon

position:15526544:1
position: 15526544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15526544-15527156:1:exon

LOC124231294
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231294
note: uncharacterized LOC124231294; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15589312..15600962
location: region:15589312-15600962:1
so has part: feature:15589312-15600962:1:exon
subclass of: SO_0000011

124231294
type: Gene
SIO_000068: ncbigene

position:15589312:1
position: 15589312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15600962:1
position: 15600962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15589312-15600962:1:exon

LOC124231294
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231294
product: uncharacterized LOC124231294
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006886483.1
SIO_010081: LOC124231294
subclass of: SO_0000673
so part of: LOC124231294
location: join(15589312..15589422,15596558..15596691,15600747..15600962)
location: region:15589312-15600962:1
so has part: feature:15589312-15589422:1:exon
so has part: feature:15596558-15596691:1:exon
so has part: feature:15600747-15600962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15589312-15589422:1:exon

position:15589422:1
position: 15589422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15596558-15596691:1:exon

position:15596558:1
position: 15596558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15596691:1
position: 15596691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15600747-15600962:1:exon

position:15600747:1
position: 15600747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124231281
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231281
note: uncharacterized LOC124231281; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15647976..15655594
location: region:15647976-15655594:1
so has part: feature:15647976-15655594:1:exon
subclass of: SO_0000011

124231281
type: Gene
SIO_000068: ncbigene

position:15647976:1
position: 15647976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15655594:1
position: 15655594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15647976-15655594:1:exon

LOC124231281
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231281
product: uncharacterized LOC124231281
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006886477.1
SIO_010081: LOC124231281
subclass of: SO_0000673
so part of: LOC124231281
location: join(15647976..15648111,15654178..15654266,15655416..15655594)
location: region:15647976-15655594:1
so has part: feature:15647976-15648111:1:exon
so has part: feature:15654178-15654266:1:exon
so has part: feature:15655416-15655594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15647976-15648111:1:exon

position:15648111:1
position: 15648111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15654178-15654266:1:exon

position:15654178:1
position: 15654178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15654266:1
position: 15654266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15655416-15655594:1:exon

position:15655416:1
position: 15655416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CXADR
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: CXADR
note: CXADR Ig-like cell adhesion molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15687244..15744009
location: region:15687244-15744009:1
so has part: feature:15687244-15744009:1:exon
subclass of: SO_0000010

124231374
type: Gene
SIO_000068: ncbigene

position:15687244:1
position: 15687244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15744009:1
position: 15744009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15687244-15744009:1:exon

CXADR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CXADR
product: CXADR Ig-like cell adhesion molecule, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648157.1
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(15687244..15687423,15709993..15710159,15711922..15712126,15718752..15718907,15719849..15719971,15720780..15720918,15722021..15722204,15743406..15744009)
location: region:15687244-15744009:1
so has part: feature:15687244-15687423:1:exon
so has part: feature:15709993-15710159:1:exon
so has part: feature:15711922-15712126:1:exon
so has part: feature:15718752-15718907:1:exon
so has part: feature:15719849-15719971:1:exon
so has part: feature:15720780-15720918:1:exon
so has part: feature:15722021-15722204:1:exon
so has part: feature:15743406-15744009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15687244-15687423:1:exon

position:15687423:1
position: 15687423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15709993-15710159:1:exon

position:15709993:1
position: 15709993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15710159:1
position: 15710159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15711922-15712126:1:exon

position:15711922:1
position: 15711922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15712126:1
position: 15712126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15718752-15718907:1:exon

position:15718752:1
position: 15718752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15718907:1
position: 15718907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15719849-15719971:1:exon

position:15719849:1
position: 15719849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15719971:1
position: 15719971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15720780-15720918:1:exon

position:15720780:1
position: 15720780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15720918:1
position: 15720918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15722021-15722204:1:exon

position:15722021:1
position: 15722021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15722204:1
position: 15722204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15743406-15744009:1:exon

position:15743406:1
position: 15743406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CXADR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CXADR
product: CXADR Ig-like cell adhesion molecule, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648158.1
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(15687303..15687423,15709993..15710159,15711922..15712126,15718752..15718907,15719849..15719971,15720780..15720918,15722021..15726310)
location: region:15687303-15726310:1
so has part: feature:15687303-15687423:1:exon
so has part: feature:15709993-15710159:1:exon
so has part: feature:15711922-15712126:1:exon
so has part: feature:15718752-15718907:1:exon
so has part: feature:15719849-15719971:1:exon
so has part: feature:15720780-15720918:1:exon
so has part: feature:15722021-15726310:1:exon

position:15687303:1
position: 15687303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15726310:1
position: 15726310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15687303-15687423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15709993-15710159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15711922-15712126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15718752-15718907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15719849-15719971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15720780-15720918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15722021-15726310:1:exon

CXADR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CXADR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform X1
translation: MALLLRFVLLCGVADFTRSLSITTPDQMIEKAKGETAYLPCKFTLSPDDQGPLDIEWLLSPPDNQKVDQVIILYSGDKIYDDYYQDLKGRVHFTSSDLKAGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIQLTVLVKPSGTRCYIDGSEEIGSDFKLKCEPKEGSLPLQYEWQKMSDPQKLPTSWLAEMTSSVINVKNASTEYSGTYSCTVRNRVGSDQCLLSLDVVPPSNRAGTIAGAIIGTLCALLVIGFIIFCCLKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKAQYNQVPSEDFERAPQSPTLPPAKLKYAYKTDSATVV
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(15687381..15687423,15709993..15710159,15711922..15712126,15718752..15718907,15719849..15719971,15720780..15720918,15722021..15722204,15743406..15743447)
location: region:15687381-15743447:1
so has part: feature:15687381-15687423:1:exon
so has part: feature:15709993-15710159:1:exon
so has part: feature:15711922-15712126:1:exon
so has part: feature:15718752-15718907:1:exon
so has part: feature:15719849-15719971:1:exon
so has part: feature:15720780-15720918:1:exon
so has part: feature:15722021-15722204:1:exon
so has part: feature:15743406-15743447:1:exon

XP_046504113.1
type: Protein
SIO_000068: ncbiprotein

position:15687381:1
position: 15687381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15743447:1
position: 15743447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15687381-15687423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15709993-15710159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15711922-15712126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15718752-15718907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15719849-15719971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15720780-15720918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15722021-15722204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15743406-15743447:1:exon

CXADR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CXADR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coxsackievirus and adenovirus receptor isoform X2
translation: MALLLRFVLLCGVADFTRSLSITTPDQMIEKAKGETAYLPCKFTLSPDDQGPLDIEWLLSPPDNQKVDQVIILYSGDKIYDDYYQDLKGRVHFTSSDLKAGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIQLTVLVKPSGTRCYIDGSEEIGSDFKLKCEPKEGSLPLQYEWQKMSDPQKLPTSWLAEMTSSVINVKNASTEYSGTYSCTVRNRVGSDQCLLSLDVVPPSNRAGTIAGAIIGTLCALLVIGFIIFCCLKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKAQYNQVPSEDFERAPQSPTLPPAKVAAPNLSRMGAVPVMIPAQSKDGSIV
SIO_010081: CXADR
subclass of: SO_0000673
so part of: CXADR
location: join(15687381..15687423,15709993..15710159,15711922..15712126,15718752..15718907,15719849..15719971,15720780..15720918,15722021..15722285)
location: region:15687381-15722285:1
so has part: feature:15687381-15687423:1:exon
so has part: feature:15709993-15710159:1:exon
so has part: feature:15711922-15712126:1:exon
so has part: feature:15718752-15718907:1:exon
so has part: feature:15719849-15719971:1:exon
so has part: feature:15720780-15720918:1:exon
so has part: feature:15722021-15722285:1:exon

XP_046504114.1
type: Protein
SIO_000068: ncbiprotein

position:15722285:1
position: 15722285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15687381-15687423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15709993-15710159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15711922-15712126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15718752-15718907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15719849-15719971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15720780-15720918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15722021-15722285:1:exon

BTG3
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: BTG3
note: BTG anti-proliferation factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15743914..15763049)
location: region:15743914-15763049:-1
so has part: feature:15743914-15763049:-1:exon
subclass of: SO_0000010

124231376
type: Gene
SIO_000068: ncbigene

position:15743914:-1
position: 15743914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15763049:-1
position: 15763049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15743914-15763049:-1:exon

BTG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: BTG3
product: BTG anti-proliferation factor 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648159.1
SIO_010081: BTG3
subclass of: SO_0000673
so part of: BTG3
location: complement(join(15743914..15744600,15749608..15749815,15754352..15754489,15758683..15758861,15762866..15763049))
location: region:15743914-15763049:-1
so has part: feature:15762866-15763049:-1:exon
so has part: feature:15758683-15758861:-1:exon
so has part: feature:15754352-15754489:-1:exon
so has part: feature:15749608-15749815:-1:exon
so has part: feature:15743914-15744600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15762866-15763049:-1:exon

position:15762866:-1
position: 15762866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15758683-15758861:-1:exon

position:15758683:-1
position: 15758683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15758861:-1
position: 15758861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15754352-15754489:-1:exon

position:15754352:-1
position: 15754352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15754489:-1
position: 15754489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15749608-15749815:-1:exon

position:15749608:-1
position: 15749608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15749815:-1
position: 15749815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15743914-15744600:-1:exon

position:15744600:-1
position: 15744600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BTG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: BTG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BTG3
translation: MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPSKGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLGLPKELTLWVDPCEVCCRYGEKNNAFIVASFENEDENKDEISKKVTRALDKVTSDYHSGSSSSDEETSKEVEVKPSSVTATPSPVYQISELIFPPLPMWHPLPRKKPGMYRGNGHQSHYPPPVPFGYPNQGRKNKPYRPIPVTWVPPPGMHCDRNHWINPHMLAPH
SIO_010081: BTG3
subclass of: SO_0000673
so part of: BTG3
location: complement(join(15744361..15744600,15749608..15749815,15754352..15754489,15758683..15758855))
location: region:15744361-15758855:-1
so has part: feature:15758683-15758855:-1:exon
so has part: feature:15754352-15754489:-1:exon
so has part: feature:15749608-15749815:-1:exon
so has part: feature:15744361-15744600:-1:exon

XP_046504115.1
type: Protein
SIO_000068: ncbiprotein

position:15744361:-1
position: 15744361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15758855:-1
position: 15758855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15758683-15758855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15754352-15754489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15749608-15749815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15744361-15744600:-1:exon

LOC124231429
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231429
note: uncharacterized LOC124231429; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15783085..15836510
location: region:15783085-15836510:1
so has part: feature:15783085-15836510:1:exon
subclass of: SO_0000011

124231429
type: Gene
SIO_000068: ncbigene

position:15783085:1
position: 15783085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15836510:1
position: 15836510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15783085-15836510:1:exon

LOC124231429
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231429
product: uncharacterized LOC124231429
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006886518.1
SIO_010081: LOC124231429
subclass of: SO_0000673
so part of: LOC124231429
location: join(15783085..15783167,15785864..15785901,15789520..15789708,15802116..15802202,15804300..15804551,15806075..15806482,15835321..15836510)
location: region:15783085-15836510:1
so has part: feature:15783085-15783167:1:exon
so has part: feature:15785864-15785901:1:exon
so has part: feature:15789520-15789708:1:exon
so has part: feature:15802116-15802202:1:exon
so has part: feature:15804300-15804551:1:exon
so has part: feature:15806075-15806482:1:exon
so has part: feature:15835321-15836510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15783085-15783167:1:exon

position:15783167:1
position: 15783167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15785864-15785901:1:exon

position:15785864:1
position: 15785864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15785901:1
position: 15785901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15789520-15789708:1:exon

position:15789520:1
position: 15789520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15789708:1
position: 15789708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15802116-15802202:1:exon

position:15802116:1
position: 15802116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15802202:1
position: 15802202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15804300-15804551:1:exon

position:15804300:1
position: 15804300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15804551:1
position: 15804551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15806075-15806482:1:exon

position:15806075:1
position: 15806075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15806482:1
position: 15806482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15835321-15836510:1:exon

position:15835321:1
position: 15835321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C21H21orf91
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: C21H21orf91
note: chromosome 21 C21orf91 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15873112..15905550)
location: region:15873112-15905550:-1
so has part: feature:15873112-15905550:-1:exon
subclass of: SO_0000010

124231345
type: Gene
SIO_000068: ncbigene

position:15873112:-1
position: 15873112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15905550:-1
position: 15905550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15873112-15905550:-1:exon

C21H21orf91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: C21H21orf91
product: chromosome 21 C21orf91 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648101.1
SIO_010081: C21H21orf91
subclass of: SO_0000673
so part of: C21H21orf91
location: complement(join(15873112..15877852,15879392..15879454,15880482..15881018,15904435..15904568,15905455..15905550))
location: region:15873112-15905550:-1
so has part: feature:15905455-15905550:-1:exon
so has part: feature:15904435-15904568:-1:exon
so has part: feature:15880482-15881018:-1:exon
so has part: feature:15879392-15879454:-1:exon
so has part: feature:15873112-15877852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15905455-15905550:-1:exon

position:15905455:-1
position: 15905455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15904435-15904568:-1:exon

position:15904435:-1
position: 15904435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15904568:-1
position: 15904568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15880482-15881018:-1:exon

position:15880482:-1
position: 15880482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15881018:-1
position: 15881018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15879392-15879454:-1:exon

position:15879392:-1
position: 15879392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15879454:-1
position: 15879454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15873112-15877852:-1:exon

position:15877852:-1
position: 15877852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H21orf91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: C21H21orf91
product: chromosome 21 C21orf91 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648100.1
SIO_010081: C21H21orf91
subclass of: SO_0000673
so part of: C21H21orf91
location: complement(join(15873112..15877852,15879392..15879454,15880482..15881018,15904435..15904568,15904805..15904890))
location: region:15873112-15904890:-1
so has part: feature:15904805-15904890:-1:exon
so has part: feature:15904435-15904568:-1:exon
so has part: feature:15880482-15881018:-1:exon
so has part: feature:15879392-15879454:-1:exon
so has part: feature:15873112-15877852:-1:exon

position:15904890:-1
position: 15904890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15904805-15904890:-1:exon

position:15904805:-1
position: 15904805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15904435-15904568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15880482-15881018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15879392-15879454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15873112-15877852:-1:exon

C21H21orf91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: C21H21orf91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein EURL homolog isoform X1
translation: MGTMNEEEQFVNIDLNDDNICSVCKLGTDEETLSFCHVCFELNIDGVPKSNLLHTRSLRGHKDCFEKFHLIANQDCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHLFNFRHKPDKKLLPQFDSQVPKYSAKWIDGSTGGLSNCTQRILEQRENTDFGLAMLQDSGATLCHDSVLWPHSHSQAQKKEETVSNPEANVQTQHAHYSREELNSMTLGEVKQLTAKLRQQIQEVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNYSKLPCLQVGRTGMKSHLPINN
SIO_010081: C21H21orf91
subclass of: SO_0000673
so part of: C21H21orf91
location: complement(join(15877686..15877852,15879392..15879454,15880482..15881018,15904435..15904568,15904805..15904806))
location: region:15877686-15904806:-1
so has part: feature:15904805-15904806:-1:exon
so has part: feature:15904435-15904568:-1:exon
so has part: feature:15880482-15881018:-1:exon
so has part: feature:15879392-15879454:-1:exon
so has part: feature:15877686-15877852:-1:exon

XP_046504056.1
type: Protein
SIO_000068: ncbiprotein

position:15877686:-1
position: 15877686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15904806:-1
position: 15904806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15904805-15904806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15904435-15904568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15880482-15881018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15879392-15879454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15877686-15877852:-1:exon

C21H21orf91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: C21H21orf91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein EURL homolog isoform X2
translation: MNEEEQFVNIDLNDDNICSVCKLGTDEETLSFCHVCFELNIDGVPKSNLLHTRSLRGHKDCFEKFHLIANQDCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHLFNFRHKPDKKLLPQFDSQVPKYSAKWIDGSTGGLSNCTQRILEQRENTDFGLAMLQDSGATLCHDSVLWPHSHSQAQKKEETVSNPEANVQTQHAHYSREELNSMTLGEVKQLTAKLRQQIQEVFEELTHQVQEKDSLASQLHVRHVAIEQLLKNYSKLPCLQVGRTGMKSHLPINN
SIO_010081: C21H21orf91
subclass of: SO_0000673
so part of: C21H21orf91
location: complement(join(15877686..15877852,15879392..15879454,15880482..15881018,15904435..15904561))
location: region:15877686-15904561:-1
so has part: feature:15904435-15904561:-1:exon
so has part: feature:15880482-15881018:-1:exon
so has part: feature:15879392-15879454:-1:exon
so has part: feature:15877686-15877852:-1:exon

XP_046504057.1
type: Protein
SIO_000068: ncbiprotein

position:15904561:-1
position: 15904561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15904435-15904561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15880482-15881018:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15879392-15879454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15877686-15877852:-1:exon

CHODL
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: CHODL
note: chondrolectin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16233330..16255413
location: region:16233330-16255413:1
so has part: feature:16233330-16255413:1:exon
subclass of: SO_0000010

124231405
type: Gene
SIO_000068: ncbigene

position:16233330:1
position: 16233330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16255413:1
position: 16255413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16233330-16255413:1:exon

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CHODL
product: chondrolectin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_046648197.1
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(16233330..16233744,16244341..16244650,16244788..16244945,16248633..16248719,16250606..16250708,16254040..16255413)
location: region:16233330-16255413:1
so has part: feature:16233330-16233744:1:exon
so has part: feature:16244341-16244650:1:exon
so has part: feature:16244788-16244945:1:exon
so has part: feature:16248633-16248719:1:exon
so has part: feature:16250606-16250708:1:exon
so has part: feature:16254040-16255413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16233330-16233744:1:exon

position:16233744:1
position: 16233744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16244341-16244650:1:exon

position:16244341:1
position: 16244341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16244650:1
position: 16244650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16244788-16244945:1:exon

position:16244788:1
position: 16244788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16244945:1
position: 16244945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16248633-16248719:1:exon

position:16248633:1
position: 16248633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16248719:1
position: 16248719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16250606-16250708:1:exon

position:16250606:1
position: 16250606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16250708:1
position: 16250708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16254040-16255413:1:exon

position:16254040:1
position: 16254040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CHODL
product: chondrolectin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_046648199.1
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(16233330..16233744,16244341..16244650,16244788..16244945,16248633..16248719,16250606..16250708,16254045..16255413)
location: region:16233330-16255413:1
so has part: feature:16233330-16233744:1:exon
so has part: feature:16244341-16244650:1:exon
so has part: feature:16244788-16244945:1:exon
so has part: feature:16248633-16248719:1:exon
so has part: feature:16250606-16250708:1:exon
so has part: feature:16254045-16255413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16233330-16233744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16244341-16244650:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16244788-16244945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16248633-16248719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16250606-16250708:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16254045-16255413:1:exon

position:16254045:1
position: 16254045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHODL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: CHODL
product: chondrolectin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_046648198.1
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(16233330..16233744,16244341..16244650,16244788..16244945,16248633..16248719,16250606..16250708,16252633..16252711,16254040..16254111)
location: region:16233330-16254111:1
so has part: feature:16233330-16233744:1:exon
so has part: feature:16244341-16244650:1:exon
so has part: feature:16244788-16244945:1:exon
so has part: feature:16248633-16248719:1:exon
so has part: feature:16250606-16250708:1:exon
so has part: feature:16252633-16252711:1:exon
so has part: feature:16254040-16254111:1:exon

position:16254111:1
position: 16254111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16233330-16233744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16244341-16244650:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16244788-16244945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16248633-16248719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16250606-16250708:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16252633-16252711:1:exon

position:16252633:1
position: 16252633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16252711:1
position: 16252711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16254040-16254111:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CHODL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondrolectin isoform X1
translation: MSRVVSLLLGAALLCGHGAFCRRVVSGQKVCFADLKHPCYKMAYFHELSSRVSFQEARLACESEGGALLSLENQTEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGEGQASGGCPDLYQWSDGSSSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPAEKTYFTNQPGDAHQNVVVTEAGIIPNLIYVVIPTIPLLLLILVAFGTCCFQMVHKSKGRTKTSPTQSTLWISKSSRKESGMEV
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(16233666..16233744,16244341..16244650,16244788..16244945,16248633..16248719,16250606..16250708,16254040..16254124)
location: region:16233666-16254124:1
so has part: feature:16233666-16233744:1:exon
so has part: feature:16244341-16244650:1:exon
so has part: feature:16244788-16244945:1:exon
so has part: feature:16248633-16248719:1:exon
so has part: feature:16250606-16250708:1:exon
so has part: feature:16254040-16254124:1:exon

XP_046504153.1
type: Protein
SIO_000068: ncbiprotein

position:16233666:1
position: 16233666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16254124:1
position: 16254124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16233666-16233744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16244341-16244650:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16244788-16244945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16248633-16248719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16250606-16250708:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16254040-16254124:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CHODL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondrolectin isoform X3
translation: MSRVVSLLLGAALLCGHGAFCRRVVSGQKVCFADLKHPCYKMAYFHELSSRVSFQEARLACESEGGALLSLENQTEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGEGQASGGCPDLYQWSDGSSSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPAEKTYFTNQPGDAHQNVVVTEAGIIPNLIYVVIPTIPLLLLILVAFGTCCFQMVHKRKNKN
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(16233666..16233744,16244341..16244650,16244788..16244945,16248633..16248719,16250606..16250708,16254045..16254060)
location: region:16233666-16254060:1
so has part: feature:16233666-16233744:1:exon
so has part: feature:16244341-16244650:1:exon
so has part: feature:16244788-16244945:1:exon
so has part: feature:16248633-16248719:1:exon
so has part: feature:16250606-16250708:1:exon
so has part: feature:16254045-16254060:1:exon

XP_046504155.1
type: Protein
SIO_000068: ncbiprotein

position:16254060:1
position: 16254060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16233666-16233744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16244341-16244650:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16244788-16244945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16248633-16248719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16250606-16250708:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16254045-16254060:1:exon

CHODL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: CHODL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondrolectin isoform X2
translation: MSRVVSLLLGAALLCGHGAFCRRVVSGQKVCFADLKHPCYKMAYFHELSSRVSFQEARLACESEGGALLSLENQTEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGEGQASGGCPDLYQWSDGSSSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPAEKTYFTNQPGDAHQNVVVTEAGIIPNLIYVVIPTIPLLLLILVAFGTCCFQMVHKRKARRNFIKDSTPLSYDCLAESLNSSL
SIO_010081: CHODL
subclass of: SO_0000673
so part of: CHODL
location: join(16233666..16233744,16244341..16244650,16244788..16244945,16248633..16248719,16250606..16250708,16252633..16252711,16254040..16254042)
location: region:16233666-16254042:1
so has part: feature:16233666-16233744:1:exon
so has part: feature:16244341-16244650:1:exon
so has part: feature:16244788-16244945:1:exon
so has part: feature:16248633-16248719:1:exon
so has part: feature:16250606-16250708:1:exon
so has part: feature:16252633-16252711:1:exon
so has part: feature:16254040-16254042:1:exon

XP_046504154.1
type: Protein
SIO_000068: ncbiprotein

position:16254042:1
position: 16254042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16233666-16233744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16244341-16244650:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16244788-16244945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16248633-16248719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16250606-16250708:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16252633-16252711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16254040-16254042:1:exon

TMPRSS15
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: TMPRSS15
note: transmembrane serine protease 15; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16257677..16386144)
location: region:16257677-16386144:-1
so has part: feature:16257677-16386144:-1:exon
subclass of: SO_0000010

124231540
type: Gene
SIO_000068: ncbigene

position:16257677:-1
position: 16257677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16386144:-1
position: 16386144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16257677-16386144:-1:exon

TMPRSS15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: TMPRSS15
product: transmembrane serine protease 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_046648334.1
SIO_010081: TMPRSS15
subclass of: SO_0000673
so part of: TMPRSS15
location: complement(join(16257677..16257832,16263353..16263492,16266852..16266947,16268630..16268811,16287732..16287906,16288070..16288119,16291602..16291697,16302966..16303098,16304425..16304535,16316781..16316921,16318997..16319122,16321659..16321748,16329763..16329898,16331901..16332051,16332553..16332658,16340398..16340547,16341265..16341405,16347568..16347674,16356131..16356239,16362190..16362321,16369026..16369061,16370556..16370600,16373268..16373419,16381984..16382051,16382331..16382461,16386000..16386144))
location: region:16257677-16386144:-1
so has part: feature:16386000-16386144:-1:exon
so has part: feature:16382331-16382461:-1:exon
so has part: feature:16381984-16382051:-1:exon
so has part: feature:16373268-16373419:-1:exon
so has part: feature:16370556-16370600:-1:exon
so has part: feature:16369026-16369061:-1:exon
so has part: feature:16362190-16362321:-1:exon
so has part: feature:16356131-16356239:-1:exon
so has part: feature:16347568-16347674:-1:exon
so has part: feature:16341265-16341405:-1:exon
so has part: feature:16340398-16340547:-1:exon
so has part: feature:16332553-16332658:-1:exon
so has part: feature:16331901-16332051:-1:exon
so has part: feature:16329763-16329898:-1:exon
so has part: feature:16321659-16321748:-1:exon
so has part: feature:16318997-16319122:-1:exon
so has part: feature:16316781-16316921:-1:exon
so has part: feature:16304425-16304535:-1:exon
so has part: feature:16302966-16303098:-1:exon
so has part: feature:16291602-16291697:-1:exon
so has part: feature:16288070-16288119:-1:exon
so has part: feature:16287732-16287906:-1:exon
so has part: feature:16268630-16268811:-1:exon
so has part: feature:16266852-16266947:-1:exon
so has part: feature:16263353-16263492:-1:exon
so has part: feature:16257677-16257832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16386000-16386144:-1:exon

position:16386000:-1
position: 16386000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16382331-16382461:-1:exon

position:16382331:-1
position: 16382331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16382461:-1
position: 16382461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16381984-16382051:-1:exon

position:16381984:-1
position: 16381984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16382051:-1
position: 16382051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16373268-16373419:-1:exon

position:16373268:-1
position: 16373268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16373419:-1
position: 16373419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16370556-16370600:-1:exon

position:16370556:-1
position: 16370556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16370600:-1
position: 16370600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16369026-16369061:-1:exon

position:16369026:-1
position: 16369026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16369061:-1
position: 16369061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16362190-16362321:-1:exon

position:16362190:-1
position: 16362190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16362321:-1
position: 16362321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16356131-16356239:-1:exon

position:16356131:-1
position: 16356131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16356239:-1
position: 16356239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16347568-16347674:-1:exon

position:16347568:-1
position: 16347568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16347674:-1
position: 16347674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16341265-16341405:-1:exon

position:16341265:-1
position: 16341265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16341405:-1
position: 16341405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:16340398-16340547:-1:exon

position:16340398:-1
position: 16340398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16340547:-1
position: 16340547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:16332553-16332658:-1:exon

position:16332553:-1
position: 16332553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16332658:-1
position: 16332658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16331901-16332051:-1:exon

position:16331901:-1
position: 16331901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16332051:-1
position: 16332051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:16329763-16329898:-1:exon

position:16329763:-1
position: 16329763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16329898:-1
position: 16329898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:16321659-16321748:-1:exon

position:16321659:-1
position: 16321659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16321748:-1
position: 16321748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:16318997-16319122:-1:exon

position:16318997:-1
position: 16318997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16319122:-1
position: 16319122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:16316781-16316921:-1:exon

position:16316781:-1
position: 16316781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16316921:-1
position: 16316921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:16304425-16304535:-1:exon

position:16304425:-1
position: 16304425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16304535:-1
position: 16304535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:16302966-16303098:-1:exon

position:16302966:-1
position: 16302966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16303098:-1
position: 16303098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:16291602-16291697:-1:exon

position:16291602:-1
position: 16291602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16291697:-1
position: 16291697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:16288070-16288119:-1:exon

position:16288070:-1
position: 16288070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16288119:-1
position: 16288119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:16287732-16287906:-1:exon

position:16287732:-1
position: 16287732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16287906:-1
position: 16287906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:16268630-16268811:-1:exon

position:16268630:-1
position: 16268630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16268811:-1
position: 16268811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:16266852-16266947:-1:exon

position:16266852:-1
position: 16266852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16266947:-1
position: 16266947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:16263353-16263492:-1:exon

position:16263353:-1
position: 16263353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16263492:-1
position: 16263492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:16257677-16257832:-1:exon

position:16257832:-1
position: 16257832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMPRSS15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: TMPRSS15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enteropeptidase
translation: MVSKRSVPSRHCSLSTYEVMFAVLFSILVIVCAGLIAISWLAINDSERDAEFGNSHEARGTLKITSGATYNPNLQDKLSVDFKVLAFDLQQMIDEIFQSSNLKNKYKNSRVLQFENGSITVIFDLFFAQWVSDENVKEEMIQGIEANKSSQLVTFHIDLNSIDITASSENSSTVIPAKTSDKLTTNSPTANPGNISVECLPGSRLCADALKCVAIDLFCDGEFNCPDGSDEDNKICATACDGRFLLTGSSGSFQAANYPNPSTSSVVCQWIIRVNQGLSIELSFDSFNTYYTDVLYIYEGVGSSKILRASLWETSPGIIRIFSNQVTATFLIGSDENDYIGFNATYTAFNSTELNNYEKINCDFEDGFCFWVQDLNDDNEWERVQGSTFPPFTGPDFDHTYGNVSGFYISTPTGPGGRRERVGLLSLPLDPTLEPVCLSFWYYMYGENVYKLSINISSDQNMEKMIFQKEGNYGETWNYGQVTLNETVEFKVAFNAFKNQLLSDIALDDISLTNGICNVSLYPEPTLVPTPPPELPTDCGGPFELWEPNTTFTSMNFPNNYPNQAFCVWNLNAQEGKNIQLHFQEFDLENIADVVEIRDGEGDDSLLLAVYTGPGPVKDVFSTTSRMTVLLITDNLLTKAGFKANFATGYHLGIPEPCKEDNFQCKNGECVPLVNLCDGLPHCPDGSDEAHCVRLFNGTTSNNGLVQFRIQSIWHVACAENWTTQISNDVCQLLGLGSENSSVPIYSTEGGPFVKLNTASNGSLTLTPSEQCLQDSLVLLQCNHKACGKRLVAQEVSPKIVGGNNAKEGAWPWVVALSYNNRLLCGASLVGSDWLVSAAHCVYGRNLEPSKWKAILGLQMTSNLTSPQVVTRLIDQIVINPHYNKRRKESDIAMMHLEFKVNYTDYIQPICLPEENQVFPPGSICSIAGWGTVEYQGSTADILQEADVPLLSNEKCQQQMPEYNITENMVCAGYEKGGVDSCQGDSGGPLMCQENNRWFLAGVTSFGYQCARPNRPGVYARVSRFTEWIQSFLY
SIO_010081: TMPRSS15
subclass of: SO_0000673
so part of: TMPRSS15
location: complement(join(16257677..16257832,16263353..16263492,16266852..16266947,16268630..16268811,16287732..16287906,16288070..16288119,16291602..16291697,16302966..16303098,16304425..16304535,16316781..16316921,16318997..16319122,16321659..16321748,16329763..16329898,16331901..16332051,16332553..16332658,16340398..16340547,16341265..16341405,16347568..16347674,16356131..16356239,16362190..16362321,16369026..16369061,16370556..16370600,16373268..16373419,16381984..16382051,16382331..16382461,16386000..16386144))
location: region:16257677-16386144:-1
so has part: feature:16386000-16386144:-1:exon
so has part: feature:16382331-16382461:-1:exon
so has part: feature:16381984-16382051:-1:exon
so has part: feature:16373268-16373419:-1:exon
so has part: feature:16370556-16370600:-1:exon
so has part: feature:16369026-16369061:-1:exon
so has part: feature:16362190-16362321:-1:exon
so has part: feature:16356131-16356239:-1:exon
so has part: feature:16347568-16347674:-1:exon
so has part: feature:16341265-16341405:-1:exon
so has part: feature:16340398-16340547:-1:exon
so has part: feature:16332553-16332658:-1:exon
so has part: feature:16331901-16332051:-1:exon
so has part: feature:16329763-16329898:-1:exon
so has part: feature:16321659-16321748:-1:exon
so has part: feature:16318997-16319122:-1:exon
so has part: feature:16316781-16316921:-1:exon
so has part: feature:16304425-16304535:-1:exon
so has part: feature:16302966-16303098:-1:exon
so has part: feature:16291602-16291697:-1:exon
so has part: feature:16288070-16288119:-1:exon
so has part: feature:16287732-16287906:-1:exon
so has part: feature:16268630-16268811:-1:exon
so has part: feature:16266852-16266947:-1:exon
so has part: feature:16263353-16263492:-1:exon
so has part: feature:16257677-16257832:-1:exon

XP_046504290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16386000-16386144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16382331-16382461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16381984-16382051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16373268-16373419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16370556-16370600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16369026-16369061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16362190-16362321:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16356131-16356239:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16347568-16347674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16341265-16341405:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16340398-16340547:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16332553-16332658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16331901-16332051:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16329763-16329898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16321659-16321748:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16318997-16319122:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:16316781-16316921:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:16304425-16304535:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16302966-16303098:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:16291602-16291697:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:16288070-16288119:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:16287732-16287906:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:16268630-16268811:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:16266852-16266947:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:16263353-16263492:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16257677-16257832:-1:exon

LOC124231580
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231580
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 16667350..16667456
location: region:16667350-16667456:1
so has part: feature:16667350-16667456:1:exon
subclass of: SO_0000623

124231580
type: Gene
SIO_000068: ncbigene

position:16667350:1
position: 16667350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16667456:1
position: 16667456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16667350-16667456:1:exon

LOC124231580
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: snRNA
gene: LOC124231580
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006886605.1
SIO_010081: LOC124231580
subclass of: SO_0000673
so part of: LOC124231580
location: 16667350..16667456
location: region:16667350-16667456:1
so has part: feature:16667350-16667456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16667350-16667456:1:exon

LOC124231532
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231532
note: magnesium transporter NIPA2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 17221282..17386547
location: region:17221282-17386547:1
so has part: feature:17221282-17386547:1:exon

124231532
type: Gene
SIO_000068: ncbigene

position:17221282:1
position: 17221282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17386547:1
position: 17386547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17221282-17386547:1:exon

LOC124231532
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231532
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC124231532
subclass of: SO_0000673
so part of: LOC124231532
location: 17221282..17221353
location: region:17221282-17221353:1
so has part: feature:17221282-17221353:1:exon

position:17221353:1
position: 17221353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17221282-17221353:1:exon

LOC124231532
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231532
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC124231532
subclass of: SO_0000673
so part of: LOC124231532
location: 17232590..17232752
location: region:17232590-17232752:1
so has part: feature:17232590-17232752:1:exon

position:17232590:1
position: 17232590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17232752:1
position: 17232752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17232590-17232752:1:exon

LOC124231532
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231532
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC124231532
subclass of: SO_0000673
so part of: LOC124231532
location: 17233427..17233515
location: region:17233427-17233515:1
so has part: feature:17233427-17233515:1:exon

position:17233427:1
position: 17233427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17233515:1
position: 17233515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17233427-17233515:1:exon

LOC124231532
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231532
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC124231532
subclass of: SO_0000673
so part of: LOC124231532
location: 17385480..17385604
location: region:17385480-17385604:1
so has part: feature:17385480-17385604:1:exon

position:17385480:1
position: 17385480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17385604:1
position: 17385604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17385480-17385604:1:exon

LOC124231532
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231532
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC124231532
subclass of: SO_0000673
so part of: LOC124231532
location: 17385710..17386547
location: region:17385710-17386547:1
so has part: feature:17385710-17386547:1:exon

position:17385710:1
position: 17385710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17385710-17386547:1:exon

LOC124231533
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231533
note: ubiquitin-conjugating enzyme E2 J2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(17679733..17751111)
location: region:17679733-17751111:-1
so has part: feature:17679733-17751111:-1:exon

124231533
type: Gene
SIO_000068: ncbigene

position:17679733:-1
position: 17679733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17751111:-1
position: 17751111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17679733-17751111:-1:exon

LOC124231533
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231533
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC124231533
subclass of: SO_0000673
so part of: LOC124231533
location: complement(17679733..17680604)
location: region:17679733-17680604:-1
so has part: feature:17679733-17680604:-1:exon

position:17680604:-1
position: 17680604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17679733-17680604:-1:exon

LOC124231533
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231533
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC124231533
subclass of: SO_0000673
so part of: LOC124231533
location: complement(17751046..17751111)
location: region:17751046-17751111:-1
so has part: feature:17751046-17751111:-1:exon

position:17751046:-1
position: 17751046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17751046-17751111:-1:exon

LOC124231573
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231573
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(18007110..18007220)
location: region:18007110-18007220:-1
so has part: feature:18007110-18007220:-1:exon
subclass of: SO_0000623

124231573
type: Gene
SIO_000068: ncbigene

position:18007110:-1
position: 18007110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18007220:-1
position: 18007220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18007110-18007220:-1:exon

LOC124231573
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: snRNA
gene: LOC124231573
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006886599.1
SIO_010081: LOC124231573
subclass of: SO_0000673
so part of: LOC124231573
location: complement(18007110..18007220)
location: region:18007110-18007220:-1
so has part: feature:18007110-18007220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18007110-18007220:-1:exon

NCAM2
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: NCAM2
note: neural cell adhesion molecule 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 18535119..19015531
location: region:18535119-19015531:1
so has part: feature:18535119-19015531:1:exon
subclass of: SO_0000010

124231534
type: Gene
SIO_000068: ncbigene

position:18535119:1
position: 18535119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19015531:1
position: 19015531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18535119-19015531:1:exon

NCAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: NCAM2
product: neural cell adhesion molecule 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_046648333.1
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(18535119..18535250,18535403..18536054,18735994..18736086,18802700..18802774,18805653..18805859,18808289..18808432,18814997..18815134,18840653..18840770,18848036..18848196,18850978..18851123,18874924..18875074,18901967..18902154,18906052..18906148,18920946..18921119,18962023..18962142,18965318..18965439,18974343..18974523,19002121..19002325,19011785..19011904,19015420..19015531)
location: region:18535119-19015531:1
so has part: feature:18535119-18535250:1:exon
so has part: feature:18535403-18536054:1:exon
so has part: feature:18735994-18736086:1:exon
so has part: feature:18802700-18802774:1:exon
so has part: feature:18805653-18805859:1:exon
so has part: feature:18808289-18808432:1:exon
so has part: feature:18814997-18815134:1:exon
so has part: feature:18840653-18840770:1:exon
so has part: feature:18848036-18848196:1:exon
so has part: feature:18850978-18851123:1:exon
so has part: feature:18874924-18875074:1:exon
so has part: feature:18901967-18902154:1:exon
so has part: feature:18906052-18906148:1:exon
so has part: feature:18920946-18921119:1:exon
so has part: feature:18962023-18962142:1:exon
so has part: feature:18965318-18965439:1:exon
so has part: feature:18974343-18974523:1:exon
so has part: feature:19002121-19002325:1:exon
so has part: feature:19011785-19011904:1:exon
so has part: feature:19015420-19015531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18535119-18535250:1:exon

position:18535250:1
position: 18535250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18535403-18536054:1:exon

position:18535403:1
position: 18535403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18536054:1
position: 18536054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18735994-18736086:1:exon

position:18735994:1
position: 18735994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18736086:1
position: 18736086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18802700-18802774:1:exon

position:18802700:1
position: 18802700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18802774:1
position: 18802774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18805653-18805859:1:exon

position:18805653:1
position: 18805653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18805859:1
position: 18805859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:18808289-18808432:1:exon

position:18808289:1
position: 18808289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18808432:1
position: 18808432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:18814997-18815134:1:exon

position:18814997:1
position: 18814997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18815134:1
position: 18815134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:18840653-18840770:1:exon

position:18840653:1
position: 18840653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18840770:1
position: 18840770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:18848036-18848196:1:exon

position:18848036:1
position: 18848036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18848196:1
position: 18848196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:18850978-18851123:1:exon

position:18850978:1
position: 18850978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18851123:1
position: 18851123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:18874924-18875074:1:exon

position:18874924:1
position: 18874924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18875074:1
position: 18875074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:18901967-18902154:1:exon

position:18901967:1
position: 18901967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18902154:1
position: 18902154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:18906052-18906148:1:exon

position:18906052:1
position: 18906052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18906148:1
position: 18906148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:18920946-18921119:1:exon

position:18920946:1
position: 18920946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18921119:1
position: 18921119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:18962023-18962142:1:exon

position:18962023:1
position: 18962023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18962142:1
position: 18962142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:18965318-18965439:1:exon

position:18965318:1
position: 18965318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18965439:1
position: 18965439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:18974343-18974523:1:exon

position:18974343:1
position: 18974343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18974523:1
position: 18974523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:19002121-19002325:1:exon

position:19002121:1
position: 19002121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19002325:1
position: 19002325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:19011785-19011904:1:exon

position:19011785:1
position: 19011785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19011904:1
position: 19011904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:19015420-19015531:1:exon

position:19015420:1
position: 19015420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: NCAM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural cell adhesion molecule 2
translation: MDKKHSAHIAAYLLGPGETGSVDTRGQLRPLCRGRVESARRGQPRGARRPPAASTSARATRRHEVAGGGSGALGCLPPRHWRAGQRADGHRAEHAVATSRRALASPIAATPLTRGAGKRTRCAQLDCGRIPGRSLRGQRPPCGAEGYASAAPPLPAPRPRRPPRRLCCRRGGRWCRRRRRRLDIVRQGAALAVTLRGGARGLRAAGHPGAAAALAVAAVAAEGSLSRAGLNNFGTVHQCHVLNMSLLLSFYLLGLLVSSGQGQVHRQGLFVDWKQNEAFYLEKGQPKTDYGTALLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGENAEVVCRVSSSPAPVVSWLYHNEEVTAISDNRFAMLANNNLQILSINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAITMSQKSFNATAERGEEMTLSCRASGSPEPTISWYRNGKFIEENEKYILKGSNTELTVRNIVNSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTHENGQVTLMCEAEGEPIPEITWKRAVDGITFSEGDKSPDGRIEVRGQHGSSSLHITDVKLSDSGRYDCEAASRIGGHQKSMFLDIEYAPKFISNQTIYYSWEGNPINISCDVNSNPPASVHWRREKLVLPAKNTTNLKTYSAGRKVILEIAPTSDNDFGRYNCTATNRIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASETWKIVRSHGVQTMVVLSNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIKDTLFNGLGLGAVIGLGVAALLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKSKELEEGKAAYLKDGSKEPIVEMRTEDERITNHEDGSPVNEPNETTPLTEPEKLPLKEENGKEVLNPETIEIKVSNDIIQSKEDDSKA
SIO_010081: NCAM2
subclass of: SO_0000673
so part of: NCAM2
location: join(18535119..18535250,18535403..18536054,18735994..18736086,18802700..18802774,18805653..18805859,18808289..18808432,18814997..18815134,18840653..18840770,18848036..18848196,18850978..18851123,18874924..18875074,18901967..18902154,18906052..18906148,18920946..18921119,18962023..18962142,18965318..18965439,18974343..18974523,19002121..19002325,19011785..19011904,19015420..19015531)
location: region:18535119-19015531:1
so has part: feature:18535119-18535250:1:exon
so has part: feature:18535403-18536054:1:exon
so has part: feature:18735994-18736086:1:exon
so has part: feature:18802700-18802774:1:exon
so has part: feature:18805653-18805859:1:exon
so has part: feature:18808289-18808432:1:exon
so has part: feature:18814997-18815134:1:exon
so has part: feature:18840653-18840770:1:exon
so has part: feature:18848036-18848196:1:exon
so has part: feature:18850978-18851123:1:exon
so has part: feature:18874924-18875074:1:exon
so has part: feature:18901967-18902154:1:exon
so has part: feature:18906052-18906148:1:exon
so has part: feature:18920946-18921119:1:exon
so has part: feature:18962023-18962142:1:exon
so has part: feature:18965318-18965439:1:exon
so has part: feature:18974343-18974523:1:exon
so has part: feature:19002121-19002325:1:exon
so has part: feature:19011785-19011904:1:exon
so has part: feature:19015420-19015531:1:exon

XP_046504289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18535119-18535250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18535403-18536054:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18735994-18736086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18802700-18802774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18805653-18805859:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18808289-18808432:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18814997-18815134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18840653-18840770:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18848036-18848196:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18850978-18851123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:18874924-18875074:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18901967-18902154:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:18906052-18906148:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18920946-18921119:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:18962023-18962142:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:18965318-18965439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18974343-18974523:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:19002121-19002325:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:19011785-19011904:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:19015420-19015531:1:exon

LOC124231535
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231535
note: protein downstream neighbor of Son-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 19668653..19775981
location: region:19668653-19775981:1
so has part: feature:19668653-19775981:1:exon

124231535
type: Gene
SIO_000068: ncbigene

position:19668653:1
position: 19668653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19775981:1
position: 19775981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19668653-19775981:1:exon

LOC124231535
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC124231535
subclass of: SO_0000673
so part of: LOC124231535
location: 19668653..19668820
location: region:19668653-19668820:1
so has part: feature:19668653-19668820:1:exon

position:19668820:1
position: 19668820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19668653-19668820:1:exon

LOC124231535
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC124231535
subclass of: SO_0000673
so part of: LOC124231535
location: 19774683..19775981
location: region:19774683-19775981:1
so has part: feature:19774683-19775981:1:exon

position:19774683:1
position: 19774683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19774683-19775981:1:exon

LOC124231360
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231360
note: Y-box-binding protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 19899537..19900869
location: region:19899537-19900869:1
so has part: feature:19899537-19900869:1:exon
subclass of: SO_0000010

124231360
type: Gene
SIO_000068: ncbigene

position:19899537:1
position: 19899537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19900869:1
position: 19900869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19899537-19900869:1:exon

LOC124231360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: LOC124231360
product: Y-box-binding protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648129.1
SIO_010081: LOC124231360
subclass of: SO_0000673
so part of: LOC124231360
location: 19899537..19900869
location: region:19899537-19900869:1
so has part: feature:19899537-19900869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19899537-19900869:1:exon

LOC124231360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: LOC124231360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y-box-binding protein 1-like
translation: MSSEAETQQPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDKKVIATKVLGTVKWFNVRNGYGFINRIDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGTEAANVTGPGGVPVQGSKYTADRNHYRRYARRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRRVRQNMYRGYRPRFHRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGGAE
SIO_010081: LOC124231360
subclass of: SO_0000673
so part of: LOC124231360
location: 19899676..19900638
location: region:19899676-19900638:1
so has part: feature:19899676-19900638:1:exon

XP_046504085.1
type: Protein
SIO_000068: ncbiprotein

position:19899676:1
position: 19899676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19900638:1
position: 19900638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19899676-19900638:1:exon

LOC124231536
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231536
note: elongation factor 1-alpha 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(21301929..21321660)
location: region:21301929-21321660:-1
so has part: feature:21301929-21321660:-1:exon

124231536
type: Gene
SIO_000068: ncbigene

position:21301929:-1
position: 21301929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21321660:-1
position: 21321660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21301929-21321660:-1:exon

LOC124231536
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231536
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231536
subclass of: SO_0000673
so part of: LOC124231536
location: complement(21301929..21303318)
location: region:21301929-21303318:-1
so has part: feature:21301929-21303318:-1:exon

position:21303318:-1
position: 21303318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21301929-21303318:-1:exon

LOC124231536
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231536
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC124231536
subclass of: SO_0000673
so part of: LOC124231536
location: complement(21321571..21321660)
location: region:21321571-21321660:-1
so has part: feature:21321571-21321660:-1:exon

position:21321571:-1
position: 21321571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21321571-21321660:-1:exon

LOC124231301
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231301
note: 39S ribosomal protein L1, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(21486058..21487002)
location: region:21486058-21487002:-1
so has part: feature:21486058-21487002:-1:exon

124231301
type: Gene
SIO_000068: ncbigene

position:21486058:-1
position: 21486058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21487002:-1
position: 21487002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21486058-21487002:-1:exon

LOC124231301
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231301
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC124231301
subclass of: SO_0000673
so part of: LOC124231301
location: complement(21486058..21487002)
location: region:21486058-21487002:-1
so has part: feature:21486058-21487002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21486058-21487002:-1:exon

LOC124231370
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231370
note: uncharacterized LOC124231370; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22575173..22579442)
location: region:22575173-22579442:-1
so has part: feature:22575173-22579442:-1:exon
subclass of: SO_0000011

124231370
type: Gene
SIO_000068: ncbigene

position:22575173:-1
position: 22575173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22579442:-1
position: 22579442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22575173-22579442:-1:exon

LOC124231370
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: lncRNA
gene: LOC124231370
product: uncharacterized LOC124231370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006886506.1
SIO_010081: LOC124231370
subclass of: SO_0000673
so part of: LOC124231370
location: complement(join(22575173..22575198,22576151..22576283,22578403..22578568,22579335..22579442))
location: region:22575173-22579442:-1
so has part: feature:22579335-22579442:-1:exon
so has part: feature:22578403-22578568:-1:exon
so has part: feature:22576151-22576283:-1:exon
so has part: feature:22575173-22575198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22579335-22579442:-1:exon

position:22579335:-1
position: 22579335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22578403-22578568:-1:exon

position:22578403:-1
position: 22578403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22578568:-1
position: 22578568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22576151-22576283:-1:exon

position:22576151:-1
position: 22576151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22576283:-1
position: 22576283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22575173-22575198:-1:exon

position:22575198:-1
position: 22575198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124231368
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231368
note: 60S ribosomal protein L7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(22622438..22623175)
location: region:22622438-22623175:-1
so has part: feature:22622438-22623175:-1:exon

124231368
type: Gene
SIO_000068: ncbigene

position:22622438:-1
position: 22622438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22623175:-1
position: 22623175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22622438-22623175:-1:exon

LOC124231368
type: Exon
subclass of: SO_0000147
RO_0002162: 89248
gene: LOC124231368
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC124231368
subclass of: SO_0000673
so part of: LOC124231368
location: complement(22622438..22623175)
location: region:22622438-22623175:-1
so has part: feature:22622438-22623175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22622438-22623175:-1:exon

LOC124231571
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: LOC124231571
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 22704665..22704772
location: region:22704665-22704772:1
so has part: feature:22704665-22704772:1:exon
subclass of: SO_0000623

124231571
type: Gene
SIO_000068: ncbigene

position:22704665:1
position: 22704665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22704772:1
position: 22704772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22704665-22704772:1:exon

LOC124231571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 89248
nc RNA class: snRNA
gene: LOC124231571
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006886597.1
SIO_010081: LOC124231571
subclass of: SO_0000673
so part of: LOC124231571
location: 22704665..22704772
location: region:22704665-22704772:1
so has part: feature:22704665-22704772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22704665-22704772:1:exon

MRPL39
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: MRPL39
note: mitochondrial ribosomal protein L39; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22737033..22756357)
location: region:22737033-22756357:-1
so has part: feature:22737033-22756357:-1:exon
subclass of: SO_0000010

124231502
type: Gene
SIO_000068: ncbigene

position:22737033:-1
position: 22737033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22756357:-1
position: 22756357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22737033-22756357:-1:exon

MRPL39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: MRPL39
product: mitochondrial ribosomal protein L39
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648315.1
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(22737033..22737136,22739801..22739848,22743822..22743975,22744901..22744966,22747489..22747601,22750212..22750279,22751247..22751346,22753362..22753501,22755289..22755495,22756233..22756357))
location: region:22737033-22756357:-1
so has part: feature:22756233-22756357:-1:exon
so has part: feature:22755289-22755495:-1:exon
so has part: feature:22753362-22753501:-1:exon
so has part: feature:22751247-22751346:-1:exon
so has part: feature:22750212-22750279:-1:exon
so has part: feature:22747489-22747601:-1:exon
so has part: feature:22744901-22744966:-1:exon
so has part: feature:22743822-22743975:-1:exon
so has part: feature:22739801-22739848:-1:exon
so has part: feature:22737033-22737136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22756233-22756357:-1:exon

position:22756233:-1
position: 22756233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22755289-22755495:-1:exon

position:22755289:-1
position: 22755289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22755495:-1
position: 22755495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22753362-22753501:-1:exon

position:22753362:-1
position: 22753362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22753501:-1
position: 22753501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22751247-22751346:-1:exon

position:22751247:-1
position: 22751247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22751346:-1
position: 22751346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22750212-22750279:-1:exon

position:22750212:-1
position: 22750212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22750279:-1
position: 22750279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22747489-22747601:-1:exon

position:22747489:-1
position: 22747489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22747601:-1
position: 22747601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22744901-22744966:-1:exon

position:22744901:-1
position: 22744901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22744966:-1
position: 22744966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22743822-22743975:-1:exon

position:22743822:-1
position: 22743822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22743975:-1
position: 22743975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:22739801-22739848:-1:exon

position:22739801:-1
position: 22739801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22739848:-1
position: 22739848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22737033-22737136:-1:exon

position:22737136:-1
position: 22737136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: MRPL39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L39, mitochondrial
translation: MAAGAWGLRLCRAAPGGGPGWRFIATSPASQLSPTELIEMRNDVFNKEKNRQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNVSTPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIQFLTFKDRDPGEVNKAYWRSCAMMMGCVIERAFKDEYVVSLVRAPQVPVIAGAFCYDVVLDKRLDEWVPTKENLRSFTKDARALIYKDLPFEPLEVDAKVALEIFQHNKYKIDFIEEKASQNPERIIKLHRFGDFIDVSEGPLIPRTSICFQYEVSAVHNLQATQSSLVRRFQGLSLPVHLRAHFTIWDKLLERSRKMVTEDQTKPTEESTSP
SIO_010081: MRPL39
subclass of: SO_0000673
so part of: MRPL39
location: complement(join(22737089..22737136,22739801..22739848,22743822..22743975,22744901..22744966,22747489..22747601,22750212..22750279,22751247..22751346,22753362..22753501,22755289..22755495,22756233..22756296))
location: region:22737089-22756296:-1
so has part: feature:22756233-22756296:-1:exon
so has part: feature:22755289-22755495:-1:exon
so has part: feature:22753362-22753501:-1:exon
so has part: feature:22751247-22751346:-1:exon
so has part: feature:22750212-22750279:-1:exon
so has part: feature:22747489-22747601:-1:exon
so has part: feature:22744901-22744966:-1:exon
so has part: feature:22743822-22743975:-1:exon
so has part: feature:22739801-22739848:-1:exon
so has part: feature:22737089-22737136:-1:exon

XP_046504271.1
type: Protein
SIO_000068: ncbiprotein

position:22737089:-1
position: 22737089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22756296:-1
position: 22756296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22756233-22756296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22755289-22755495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22753362-22753501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22751247-22751346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22750212-22750279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22747489-22747601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22744901-22744966:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22743822-22743975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22739801-22739848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22737089-22737136:-1:exon

JAM2
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: JAM2
note: junctional adhesion molecule 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22785017..22846788
location: region:22785017-22846788:1
so has part: feature:22785017-22846788:1:exon
subclass of: SO_0000010

124231462
type: Gene
SIO_000068: ncbigene

position:22785017:1
position: 22785017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22846788:1
position: 22846788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22785017-22846788:1:exon

JAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: JAM2
product: junctional adhesion molecule 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648263.1
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(22785017..22785352,22819793..22819858,22825351..22825458,22826826..22826978,22829971..22830173,22832900..22832999,22837972..22838079,22839859..22839874,22842678..22842720,22844608..22846788)
location: region:22785017-22846788:1
so has part: feature:22785017-22785352:1:exon
so has part: feature:22819793-22819858:1:exon
so has part: feature:22825351-22825458:1:exon
so has part: feature:22826826-22826978:1:exon
so has part: feature:22829971-22830173:1:exon
so has part: feature:22832900-22832999:1:exon
so has part: feature:22837972-22838079:1:exon
so has part: feature:22839859-22839874:1:exon
so has part: feature:22842678-22842720:1:exon
so has part: feature:22844608-22846788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22785017-22785352:1:exon

position:22785352:1
position: 22785352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22819793-22819858:1:exon

position:22819793:1
position: 22819793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22819858:1
position: 22819858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22825351-22825458:1:exon

position:22825351:1
position: 22825351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22825458:1
position: 22825458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22826826-22826978:1:exon

position:22826826:1
position: 22826826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22826978:1
position: 22826978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22829971-22830173:1:exon

position:22829971:1
position: 22829971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22830173:1
position: 22830173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22832900-22832999:1:exon

position:22832900:1
position: 22832900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22832999:1
position: 22832999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22837972-22838079:1:exon

position:22837972:1
position: 22837972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22838079:1
position: 22838079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22839859-22839874:1:exon

position:22839859:1
position: 22839859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22839874:1
position: 22839874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:22842678-22842720:1:exon

position:22842678:1
position: 22842678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22842720:1
position: 22842720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22844608-22846788:1:exon

position:22844608:1
position: 22844608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: JAM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctional adhesion molecule B
translation: MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAIEYQEVILACKYPKKTISSRLEWKKLGRSVSFVYYQQALQGDFKERAEMIDFSIRIKNVTRNDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPHSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLGNSKVGSQSTNSSYSMNTKSGTLQFNTVSKMDSGEYSCEARNSVGHRKCPGKRMQVDDLNISGIIAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSSSASKATAMSENDFKHTKSFII
SIO_010081: JAM2
subclass of: SO_0000673
so part of: JAM2
location: join(22785286..22785352,22819793..22819858,22825351..22825458,22826826..22826978,22829971..22830173,22832900..22832999,22837972..22838079,22839859..22839874,22842678..22842720,22844608..22844640)
location: region:22785286-22844640:1
so has part: feature:22785286-22785352:1:exon
so has part: feature:22819793-22819858:1:exon
so has part: feature:22825351-22825458:1:exon
so has part: feature:22826826-22826978:1:exon
so has part: feature:22829971-22830173:1:exon
so has part: feature:22832900-22832999:1:exon
so has part: feature:22837972-22838079:1:exon
so has part: feature:22839859-22839874:1:exon
so has part: feature:22842678-22842720:1:exon
so has part: feature:22844608-22844640:1:exon

XP_046504219.1
type: Protein
SIO_000068: ncbiprotein

position:22785286:1
position: 22785286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22844640:1
position: 22844640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22785286-22785352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22819793-22819858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22825351-22825458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22826826-22826978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22829971-22830173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22832900-22832999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22837972-22838079:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22839859-22839874:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22842678-22842720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22844608-22844640:1:exon

ATP5PF
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: ATP5PF
note: ATP synthase peripheral stalk subunit F6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22853045..22863184)
location: region:22853045-22863184:-1
so has part: feature:22853045-22863184:-1:exon
subclass of: SO_0000010

124231327
type: Gene
SIO_000068: ncbigene

position:22853045:-1
position: 22853045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22863184:-1
position: 22863184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22853045-22863184:-1:exon

ATP5PF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ATP5PF
product: ATP synthase peripheral stalk subunit F6, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648062.1
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(22853045..22853177,22853928..22854052,22858599..22858772,22862891..22863029))
location: region:22853045-22863029:-1
so has part: feature:22862891-22863029:-1:exon
so has part: feature:22858599-22858772:-1:exon
so has part: feature:22853928-22854052:-1:exon
so has part: feature:22853045-22853177:-1:exon

position:22863029:-1
position: 22863029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22862891-22863029:-1:exon

position:22862891:-1
position: 22862891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22858599-22858772:-1:exon

position:22858599:-1
position: 22858599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22858772:-1
position: 22858772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22853928-22854052:-1:exon

position:22853928:-1
position: 22853928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22854052:-1
position: 22854052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22853045-22853177:-1:exon

position:22853177:-1
position: 22853177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5PF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ATP5PF
product: ATP synthase peripheral stalk subunit F6, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648061.1
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(22853045..22853177,22853928..22854052,22858599..22858772,22862246..22862384))
location: region:22853045-22862384:-1
so has part: feature:22862246-22862384:-1:exon
so has part: feature:22858599-22858772:-1:exon
so has part: feature:22853928-22854052:-1:exon
so has part: feature:22853045-22853177:-1:exon

position:22862384:-1
position: 22862384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22862246-22862384:-1:exon

position:22862246:-1
position: 22862246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22858599-22858772:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22853928-22854052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22853045-22853177:-1:exon

ATP5PF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ATP5PF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X2
translation: MILRRLFRLSSVVQSAISVHLRRNIGVTAVAFKELDPIQKLFVDKIREYRTKRQTSGGPVDIGPEYQQDLERELFKLKQMYGKADMNTFPNFKFEDPKFEVFDKPQS
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(22853140..22853177,22853928..22854052,22858599..22858759))
location: region:22853140-22858759:-1
so has part: feature:22858599-22858759:-1:exon
so has part: feature:22853928-22854052:-1:exon
so has part: feature:22853140-22853177:-1:exon

XP_046504017.1
type: Protein
SIO_000068: ncbiprotein

position:22853140:-1
position: 22853140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22858759:-1
position: 22858759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22858599-22858759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22853928-22854052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22853140-22853177:-1:exon

ATP5PF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ATP5PF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X2
translation: MILRRLFRLSSVVQSAISVHLRRNIGVTAVAFKELDPIQKLFVDKIREYRTKRQTSGGPVDIGPEYQQDLERELFKLKQMYGKADMNTFPNFKFEDPKFEVFDKPQS
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(22853140..22853177,22853928..22854052,22858599..22858759))
location: region:22853140-22858759:-1
so has part: feature:22858599-22858759:-1:exon
so has part: feature:22853928-22854052:-1:exon
so has part: feature:22853140-22853177:-1:exon

XP_046504018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22858599-22858759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22853928-22854052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22853140-22853177:-1:exon

ATP5PF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: ATP5PF
product: ATP synthase peripheral stalk subunit F6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_046648060.1
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(22862289..22862420,22862891..22863184))
location: region:22862289-22863184:-1
so has part: feature:22862891-22863184:-1:exon
so has part: feature:22862289-22862420:-1:exon

position:22862289:-1
position: 22862289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22862891-22863184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22862289-22862420:-1:exon

position:22862420:-1
position: 22862420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5PF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: ATP5PF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase-coupling factor 6, mitochondrial isoform X1
translation: MGVTAPGTSGNKTQKRPRGGRCGGEGPGTKPARAGPRSPPPPRPHSPAPESALSPPPALQSRLRKAAARAPRAVSLPSRPVADCLRDASCPASVDRLKRRPIMHCEVG
SIO_010081: ATP5PF
subclass of: SO_0000673
so part of: ATP5PF
location: complement(join(22862325..22862420,22862891..22863121))
location: region:22862325-22863121:-1
so has part: feature:22862891-22863121:-1:exon
so has part: feature:22862325-22862420:-1:exon

XP_046504016.1
type: Protein
SIO_000068: ncbiprotein

position:22862325:-1
position: 22862325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22863121:-1
position: 22863121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22862891-22863121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22862325-22862420:-1:exon

GABPA
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: GABPA
note: GA binding protein transcription factor subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22862369..22898539
location: region:22862369-22898539:1
so has part: feature:22862369-22898539:1:exon
subclass of: SO_0000010

124231325
type: Gene
SIO_000068: ncbigene

position:22862369:1
position: 22862369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22898539:1
position: 22898539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22862369-22898539:1:exon

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: GABPA
product: GA binding protein transcription factor subunit alpha, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648058.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(22862369..22862460,22867863..22867965,22871749..22871893,22875037..22875121,22877076..22877321,22884190..22884384,22888175..22888228,22889204..22889344,22889860..22890052,22894572..22898539)
location: region:22862369-22898539:1
so has part: feature:22862369-22862460:1:exon
so has part: feature:22867863-22867965:1:exon
so has part: feature:22871749-22871893:1:exon
so has part: feature:22875037-22875121:1:exon
so has part: feature:22877076-22877321:1:exon
so has part: feature:22884190-22884384:1:exon
so has part: feature:22888175-22888228:1:exon
so has part: feature:22889204-22889344:1:exon
so has part: feature:22889860-22890052:1:exon
so has part: feature:22894572-22898539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22862369-22862460:1:exon

position:22862460:1
position: 22862460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22867863-22867965:1:exon

position:22867863:1
position: 22867863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22867965:1
position: 22867965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22871749-22871893:1:exon

position:22871749:1
position: 22871749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22871893:1
position: 22871893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22875037-22875121:1:exon

position:22875037:1
position: 22875037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22875121:1
position: 22875121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22877076-22877321:1:exon

position:22877076:1
position: 22877076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22877321:1
position: 22877321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22884190-22884384:1:exon

position:22884190:1
position: 22884190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22884384:1
position: 22884384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22888175-22888228:1:exon

position:22888175:1
position: 22888175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22888228:1
position: 22888228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22889204-22889344:1:exon

position:22889204:1
position: 22889204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22889344:1
position: 22889344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:22889860-22890052:1:exon

position:22889860:1
position: 22889860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22890052:1
position: 22890052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22894572-22898539:1:exon

position:22894572:1
position: 22894572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: GABPA
product: GA binding protein transcription factor subunit alpha, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648056.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(22862846..22862982,22867863..22867965,22871749..22871893,22875037..22875121,22877076..22877321,22884190..22884384,22888175..22888228,22889204..22889344,22889860..22890052,22894572..22898539)
location: region:22862846-22898539:1
so has part: feature:22862846-22862982:1:exon
so has part: feature:22867863-22867965:1:exon
so has part: feature:22871749-22871893:1:exon
so has part: feature:22875037-22875121:1:exon
so has part: feature:22877076-22877321:1:exon
so has part: feature:22884190-22884384:1:exon
so has part: feature:22888175-22888228:1:exon
so has part: feature:22889204-22889344:1:exon
so has part: feature:22889860-22890052:1:exon
so has part: feature:22894572-22898539:1:exon

position:22862846:1
position: 22862846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22862846-22862982:1:exon

position:22862982:1
position: 22862982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22867863-22867965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22871749-22871893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22875037-22875121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22877076-22877321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22884190-22884384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22888175-22888228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22889204-22889344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22889860-22890052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22894572-22898539:1:exon

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: GABPA
product: GA binding protein transcription factor subunit alpha, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648057.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(22863306..22863961,22867863..22867965,22871749..22871893,22875037..22875121,22877076..22877321,22884190..22884384,22888175..22888228,22889204..22889344,22889860..22890052,22894572..22898539)
location: region:22863306-22898539:1
so has part: feature:22863306-22863961:1:exon
so has part: feature:22867863-22867965:1:exon
so has part: feature:22871749-22871893:1:exon
so has part: feature:22875037-22875121:1:exon
so has part: feature:22877076-22877321:1:exon
so has part: feature:22884190-22884384:1:exon
so has part: feature:22888175-22888228:1:exon
so has part: feature:22889204-22889344:1:exon
so has part: feature:22889860-22890052:1:exon
so has part: feature:22894572-22898539:1:exon

position:22863306:1
position: 22863306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22863306-22863961:1:exon

position:22863961:1
position: 22863961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22867863-22867965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22871749-22871893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22875037-22875121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22877076-22877321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22884190-22884384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22888175-22888228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22889204-22889344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22889860-22890052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22894572-22898539:1:exon

GABPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: GABPA
product: GA binding protein transcription factor subunit alpha, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648059.1
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(22863306..22863509,22863855..22863961,22867863..22867965,22871749..22871893,22875037..22875121,22877076..22877321,22884190..22884384,22888175..22888228,22889204..22889344,22889860..22890052,22894572..22898539)
location: region:22863306-22898539:1
so has part: feature:22863306-22863509:1:exon
so has part: feature:22863855-22863961:1:exon
so has part: feature:22867863-22867965:1:exon
so has part: feature:22871749-22871893:1:exon
so has part: feature:22875037-22875121:1:exon
so has part: feature:22877076-22877321:1:exon
so has part: feature:22884190-22884384:1:exon
so has part: feature:22888175-22888228:1:exon
so has part: feature:22889204-22889344:1:exon
so has part: feature:22889860-22890052:1:exon
so has part: feature:22894572-22898539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22863306-22863509:1:exon

position:22863509:1
position: 22863509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22863855-22863961:1:exon

position:22863855:1
position: 22863855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22867863-22867965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22871749-22871893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22875037-22875121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22877076-22877321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22884190-22884384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22888175-22888228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22889204-22889344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22889860-22890052:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22894572-22898539:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: GABPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain
translation: MTKREAEELIEIEIDGTEKPECTEESIVEQTYTPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPAETVEVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLSTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTLKVINSSAKAAKIQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(22867889..22867965,22871749..22871893,22875037..22875121,22877076..22877321,22884190..22884384,22888175..22888228,22889204..22889344,22889860..22890052,22894572..22894800)
location: region:22867889-22894800:1
so has part: feature:22867889-22867965:1:exon
so has part: feature:22871749-22871893:1:exon
so has part: feature:22875037-22875121:1:exon
so has part: feature:22877076-22877321:1:exon
so has part: feature:22884190-22884384:1:exon
so has part: feature:22888175-22888228:1:exon
so has part: feature:22889204-22889344:1:exon
so has part: feature:22889860-22890052:1:exon
so has part: feature:22894572-22894800:1:exon

XP_046504012.1
type: Protein
SIO_000068: ncbiprotein

position:22867889:1
position: 22867889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22894800:1
position: 22894800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22867889-22867965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22871749-22871893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22875037-22875121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22877076-22877321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22884190-22884384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22888175-22888228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22889204-22889344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22889860-22890052:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22894572-22894800:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: GABPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain
translation: MTKREAEELIEIEIDGTEKPECTEESIVEQTYTPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPAETVEVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLSTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTLKVINSSAKAAKIQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(22867889..22867965,22871749..22871893,22875037..22875121,22877076..22877321,22884190..22884384,22888175..22888228,22889204..22889344,22889860..22890052,22894572..22894800)
location: region:22867889-22894800:1
so has part: feature:22867889-22867965:1:exon
so has part: feature:22871749-22871893:1:exon
so has part: feature:22875037-22875121:1:exon
so has part: feature:22877076-22877321:1:exon
so has part: feature:22884190-22884384:1:exon
so has part: feature:22888175-22888228:1:exon
so has part: feature:22889204-22889344:1:exon
so has part: feature:22889860-22890052:1:exon
so has part: feature:22894572-22894800:1:exon

XP_046504013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22867889-22867965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22871749-22871893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22875037-22875121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22877076-22877321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22884190-22884384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22888175-22888228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22889204-22889344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22889860-22890052:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22894572-22894800:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: GABPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain
translation: MTKREAEELIEIEIDGTEKPECTEESIVEQTYTPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPAETVEVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLSTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTLKVINSSAKAAKIQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(22867889..22867965,22871749..22871893,22875037..22875121,22877076..22877321,22884190..22884384,22888175..22888228,22889204..22889344,22889860..22890052,22894572..22894800)
location: region:22867889-22894800:1
so has part: feature:22867889-22867965:1:exon
so has part: feature:22871749-22871893:1:exon
so has part: feature:22875037-22875121:1:exon
so has part: feature:22877076-22877321:1:exon
so has part: feature:22884190-22884384:1:exon
so has part: feature:22888175-22888228:1:exon
so has part: feature:22889204-22889344:1:exon
so has part: feature:22889860-22890052:1:exon
so has part: feature:22894572-22894800:1:exon

XP_046504014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22867889-22867965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22871749-22871893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22875037-22875121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22877076-22877321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22884190-22884384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22888175-22888228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22889204-22889344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22889860-22890052:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22894572-22894800:1:exon

GABPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: GABPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein alpha chain
translation: MTKREAEELIEIEIDGTEKPECTEESIVEQTYTPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPAETVEVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERLGIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLSTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTTLKVINSSAKAAKIQRAPRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
SIO_010081: GABPA
subclass of: SO_0000673
so part of: GABPA
location: join(22867889..22867965,22871749..22871893,22875037..22875121,22877076..22877321,22884190..22884384,22888175..22888228,22889204..22889344,22889860..22890052,22894572..22894800)
location: region:22867889-22894800:1
so has part: feature:22867889-22867965:1:exon
so has part: feature:22871749-22871893:1:exon
so has part: feature:22875037-22875121:1:exon
so has part: feature:22877076-22877321:1:exon
so has part: feature:22884190-22884384:1:exon
so has part: feature:22888175-22888228:1:exon
so has part: feature:22889204-22889344:1:exon
so has part: feature:22889860-22890052:1:exon
so has part: feature:22894572-22894800:1:exon

XP_046504015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22867889-22867965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22871749-22871893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22875037-22875121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22877076-22877321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22884190-22884384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22888175-22888228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22889204-22889344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22889860-22890052:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22894572-22894800:1:exon

APP
type: Gene
subclass of: SO_0000704
RO_0002162: 89248
gene: APP
note: amyloid beta precursor protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22988323..23242307)
location: region:22988323-23242307:-1
so has part: feature:22988323-23242307:-1:exon
subclass of: SO_0000010

124231431
type: Gene
SIO_000068: ncbigene

position:22988323:-1
position: 22988323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23242307:-1
position: 23242307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22988323-23242307:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: APP
product: amyloid beta precursor protein, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648237.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(22988323..22989536,22998574..22998720,23001478..23001578,23007367..23007420,23015258..23015479,23047294..23047393,23048282..23048410,23064299..23064457,23065150..23065224,23071527..23071660,23083972..23084028,23086346..23086513,23102604..23102806,23130655..23130848,23133547..23133659,23163682..23163811,23182987..23183154,23242043..23242307))
location: region:22988323-23242307:-1
so has part: feature:23242043-23242307:-1:exon
so has part: feature:23182987-23183154:-1:exon
so has part: feature:23163682-23163811:-1:exon
so has part: feature:23133547-23133659:-1:exon
so has part: feature:23130655-23130848:-1:exon
so has part: feature:23102604-23102806:-1:exon
so has part: feature:23086346-23086513:-1:exon
so has part: feature:23083972-23084028:-1:exon
so has part: feature:23071527-23071660:-1:exon
so has part: feature:23065150-23065224:-1:exon
so has part: feature:23064299-23064457:-1:exon
so has part: feature:23048282-23048410:-1:exon
so has part: feature:23047294-23047393:-1:exon
so has part: feature:23015258-23015479:-1:exon
so has part: feature:23007367-23007420:-1:exon
so has part: feature:23001478-23001578:-1:exon
so has part: feature:22998574-22998720:-1:exon
so has part: feature:22988323-22989536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23242043-23242307:-1:exon

position:23242043:-1
position: 23242043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23182987-23183154:-1:exon

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position:23183154:-1
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urn:…
SIO_000300: 3
SIO_000628: feature:23163682-23163811:-1:exon

position:23163682:-1
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position:23163811:-1
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urn:…
SIO_000300: 4
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position:23133547:-1
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position:23133659:-1
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type: ReverseStrandPosition
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urn:…
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SIO_000628: feature:23130655-23130848:-1:exon

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position:23130848:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:23102604-23102806:-1:exon

position:23102604:-1
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reference: sequence
type: ReverseStrandPosition
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position:23102806:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:23086346-23086513:-1:exon

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reference: sequence
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position:23086513:-1
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urn:…
SIO_000300: 8
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reference: sequence
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position:23084028:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:23071527-23071660:-1:exon

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reference: sequence
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position:23071660:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:23065150-23065224:-1:exon

position:23065150:-1
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reference: sequence
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position:23065224:-1
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urn:…
SIO_000300: 11
SIO_000628: feature:23064299-23064457:-1:exon

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reference: sequence
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position:23064457:-1
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urn:…
SIO_000300: 12
SIO_000628: feature:23048282-23048410:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:23048410:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:23047294-23047393:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:23047393:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:23015258-23015479:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:23015479:-1
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reference: sequence
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urn:…
SIO_000300: 15
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reference: sequence
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position:23007420:-1
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urn:…
SIO_000300: 16
SIO_000628: feature:23001478-23001578:-1:exon

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reference: sequence
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position:23001578:-1
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urn:…
SIO_000300: 17
SIO_000628: feature:22998574-22998720:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:22988323-22989536:-1:exon

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position: 22989536
reference: sequence
type: ReverseStrandPosition
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APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: APP
product: amyloid beta precursor protein, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648236.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
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location: region:22988323-23242302:-1
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so has part: feature:22998574-22998720:-1:exon
so has part: feature:22988323-22989536:-1:exon

position:23242302:-1
position: 23242302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23242043-23242302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23182987-23183154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23163682-23163811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23133547-23133659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23130655-23130848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23102604-23102806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23071527-23071660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23065150-23065224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23064299-23064457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23048282-23048410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23047294-23047393:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23015258-23015479:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23001478-23001578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22998574-22998720:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22988323-22989536:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: APP
product: amyloid beta precursor protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648232.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(22988323..22989536,22998574..22998720,23001478..23001578,23015258..23015479,23047294..23047393,23048282..23048410,23064299..23064457,23065150..23065224,23071527..23071660,23083972..23084028,23086346..23086513,23102604..23102806,23130655..23130848,23133547..23133659,23163682..23163811,23182987..23183154,23242043..23242298))
location: region:22988323-23242298:-1
so has part: feature:23242043-23242298:-1:exon
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so has part: feature:23015258-23015479:-1:exon
so has part: feature:23001478-23001578:-1:exon
so has part: feature:22998574-22998720:-1:exon
so has part: feature:22988323-22989536:-1:exon

position:23242298:-1
position: 23242298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23242043-23242298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23182987-23183154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23163682-23163811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23133547-23133659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23130655-23130848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23102604-23102806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23086346-23086513:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23083972-23084028:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23071527-23071660:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23065150-23065224:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23064299-23064457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23048282-23048410:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23047294-23047393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:23015258-23015479:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:23001478-23001578:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:22998574-22998720:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:22988323-22989536:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: APP
product: amyloid beta precursor protein, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648234.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(22988323..22989536,22998574..22998720,23001478..23001578,23015258..23015479,23047294..23047393,23048282..23048410,23064299..23064457,23065150..23065224,23071527..23071660,23086346..23086513,23102604..23102806,23130655..23130848,23133547..23133659,23163682..23163811,23182987..23183154,23242043..23242293))
location: region:22988323-23242293:-1
so has part: feature:23242043-23242293:-1:exon
so has part: feature:23182987-23183154:-1:exon
so has part: feature:23163682-23163811:-1:exon
so has part: feature:23133547-23133659:-1:exon
so has part: feature:23130655-23130848:-1:exon
so has part: feature:23102604-23102806:-1:exon
so has part: feature:23086346-23086513:-1:exon
so has part: feature:23071527-23071660:-1:exon
so has part: feature:23065150-23065224:-1:exon
so has part: feature:23064299-23064457:-1:exon
so has part: feature:23048282-23048410:-1:exon
so has part: feature:23047294-23047393:-1:exon
so has part: feature:23015258-23015479:-1:exon
so has part: feature:23001478-23001578:-1:exon
so has part: feature:22998574-22998720:-1:exon
so has part: feature:22988323-22989536:-1:exon

position:23242293:-1
position: 23242293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23242043-23242293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23182987-23183154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23163682-23163811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23133547-23133659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23130655-23130848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23102604-23102806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23086346-23086513:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23071527-23071660:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23065150-23065224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23064299-23064457:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23048282-23048410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23047294-23047393:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23015258-23015479:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:23001478-23001578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22998574-22998720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:22988323-22989536:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: APP
product: amyloid beta precursor protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648233.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(22988323..22989536,22998574..22998720,23001478..23001578,23007367..23007420,23015258..23015479,23047294..23047393,23048282..23048410,23064299..23064457,23065150..23065224,23071527..23071660,23086346..23086513,23102604..23102806,23130655..23130848,23133547..23133659,23163682..23163811,23182987..23183154,23242043..23242293))
location: region:22988323-23242293:-1
so has part: feature:23242043-23242293:-1:exon
so has part: feature:23182987-23183154:-1:exon
so has part: feature:23163682-23163811:-1:exon
so has part: feature:23133547-23133659:-1:exon
so has part: feature:23130655-23130848:-1:exon
so has part: feature:23102604-23102806:-1:exon
so has part: feature:23086346-23086513:-1:exon
so has part: feature:23071527-23071660:-1:exon
so has part: feature:23065150-23065224:-1:exon
so has part: feature:23064299-23064457:-1:exon
so has part: feature:23048282-23048410:-1:exon
so has part: feature:23047294-23047393:-1:exon
so has part: feature:23015258-23015479:-1:exon
so has part: feature:23007367-23007420:-1:exon
so has part: feature:23001478-23001578:-1:exon
so has part: feature:22998574-22998720:-1:exon
so has part: feature:22988323-22989536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23242043-23242293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23182987-23183154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23163682-23163811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23133547-23133659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23130655-23130848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23102604-23102806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23086346-23086513:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23071527-23071660:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23065150-23065224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23064299-23064457:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23048282-23048410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23047294-23047393:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23015258-23015479:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:23007367-23007420:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:23001478-23001578:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:22998574-22998720:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:22988323-22989536:-1:exon

APP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 89248
gene: APP
product: amyloid beta precursor protein, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_046648235.1
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(22988323..22989536,22998574..22998720,23001478..23001578,23007367..23007420,23015258..23015479,23047294..23047393,23048282..23048410,23064299..23064457,23065150..23065224,23071527..23071660,23102604..23102806,23130655..23130848,23133547..23133659,23163682..23163811,23182987..23183154,23242043..23242238))
location: region:22988323-23242238:-1
so has part: feature:23242043-23242238:-1:exon
so has part: feature:23182987-23183154:-1:exon
so has part: feature:23163682-23163811:-1:exon
so has part: feature:23133547-23133659:-1:exon
so has part: feature:23130655-23130848:-1:exon
so has part: feature:23102604-23102806:-1:exon
so has part: feature:23071527-23071660:-1:exon
so has part: feature:23065150-23065224:-1:exon
so has part: feature:23064299-23064457:-1:exon
so has part: feature:23048282-23048410:-1:exon
so has part: feature:23047294-23047393:-1:exon
so has part: feature:23015258-23015479:-1:exon
so has part: feature:23007367-23007420:-1:exon
so has part: feature:23001478-23001578:-1:exon
so has part: feature:22998574-22998720:-1:exon
so has part: feature:22988323-22989536:-1:exon

position:23242238:-1
position: 23242238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23242043-23242238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23182987-23183154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23163682-23163811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23133547-23133659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23130655-23130848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23102604-23102806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23071527-23071660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23065150-23065224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23064299-23064457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23048282-23048410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23047294-23047393:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23015258-23015479:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23007367-23007420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:23001478-23001578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22998574-22998720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:22988323-22989536:-1:exon

APP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 89248
gene: APP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta precursor protein isoform X5
translation: MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHAHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEDVADVEEEEAEDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
SIO_010081: APP
subclass of: SO_0000673
so part of: APP
location: complement(join(22989435..22989536,22998574..22998720,23001478..23001578,23015258..23015479,23047294..23047393,23048282..23048410,23064299..23064457,23065150..23065224,23071527..23071660,23102604..23102806,23130655..23130848,23133547..23133659,23163682..23163811,23182987..23183154,23242043..23242099))
location: region:22989435-23242099:-1
so has part: feature:23242043-23242099:-1:exon
so has part: feature:23182987-23183154:-1:exon
so has part: feature:23163682-23163811:-1:exon
so has part: feature:23133547-23133659:-1:exon
so has part: feature:23130655-23130848:-1:exon
so has part: feature:23102604-23102806:-1:exon
so has part: feature:23071527-23071660:-1:exon
so has part: feature:23065150-23065224:-1:exon
so has part: feature:23064299-23064457:-1:exon
so has part: feature:23048282-23048410:-1:exon
so has part: feature:23047294-23047393:-1:exon
so has part: feature:23015258-23015479:-1:exon
so has part: feature:23001478-23001578:-1:exon
so has part: feature:22998574-22998720:-1:exon
so has part: feature:22989435-22989536:-1:exon

XP_046504192.1
type: Protein
SIO_000068: ncbiprotein

position:22989435:-1
position: 22989435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23242099:-1
position: 23242099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23242043-23242099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23182987-23183154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23163682-23163811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23133547-23133659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23130655-23130848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23102604-23102806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23071527-23071660:-1:exon