Apus apus isolate bApuApu2 chromosome 27, bApuApu2.pri.cur, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Apus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM036529.1.\nAssembly name: bApuApu2.pri.cur\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGQY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 17-JUN-2021\nAssembly Method :: FALCON-kit v. 1.8.1; FALCON-Unzip v.\n 1.3.7; purge-dups v. 0.0.3; Longranger v.\n 2.2.2; scaff10X v. 4.2; Bionano solve v.\n 3.5.1; Salsa2 v. 2.2.0; dentist v. 1.0.0;\n Freebays v. 1.3.2; gEVAL manual curation\n v. 2021-06-17\nAssembly Name :: bApuApu2.pri.cur\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 103.36x\nSequencing Technology :: PacBio Sequel I CLR; Bionano Genomics\n DLS; Arima Genomics Hi-C; 10X Genomics\n linked reads\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_020740795.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/26/2023\n##Genome-Annotation-Data-END##
uncharacterized LOC127394903; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127394969; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127394969, transcript variant X3
uncharacterized LOC127394969, transcript variant X1
uncharacterized LOC127394969, transcript variant X2
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
cell adhesion molecule 3; Derived by automated computational analysis using gene prediction method: Gnomon.
cell adhesion molecule 3, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
cell adhesion molecule 3, transcript variant X2
cell adhesion molecule 3, transcript variant X3
cell adhesion molecule 3, transcript variant X5
cell adhesion molecule 3, transcript variant X6
cell adhesion molecule 3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein
atypical chemokine receptor 1 (Duffy blood group); Derived by automated computational analysis using gene prediction method: Gnomon.
atypical chemokine receptor 1 (Duffy blood group)
serum amyloid P-component-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: serum amyloid P-component-like
dual specificity phosphatase 23; Derived by automated computational analysis using gene prediction method: Gnomon.
dual specificity phosphatase 23, transcript variant X1
dual specificity phosphatase 23, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
dual specificity phosphatase 23, transcript variant X3
dual specificity phosphatase 23, transcript variant X2
dual specificity protein phosphatase 23 isoform X1
dual specificity protein phosphatase 23 isoform X2
immunoglobulin superfamily member 9; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: protein turtle homolog A
cilia and flagella associated protein 45; Derived by automated computational analysis using gene prediction method: Gnomon.
cilia and flagella associated protein 45, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
cilia and flagella associated protein 45, transcript variant X2
cilia and flagella associated protein 45, transcript variant X1
cilia- and flagella-associated protein 45 isoform X1
cilia- and flagella-associated protein 45 isoform X2
V-set and immunoglobulin domain containing 8; Derived by automated computational analysis using gene prediction method: Gnomon.
V-set and immunoglobulin domain containing 8, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
V-set and immunoglobulin domain containing 8, transcript variant X2
V-set and immunoglobulin domain-containing protein 8 isoform X1
V-set and immunoglobulin domain-containing protein 8 isoform X2
cilia and flagella associated protein 126; Derived by automated computational analysis using gene prediction method: Gnomon.
cilia and flagella associated protein 126
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
succinate dehydrogenase complex subunit C; Derived by automated computational analysis using gene prediction method: Gnomon.
succinate dehydrogenase complex subunit C
succinate dehydrogenase cytochrome b560 subunit, mitochondrial
myelin protein zero; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 Proteins
tuftelin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
cingulin; Derived by automated computational analysis using gene prediction method: Gnomon.
proteasome 20S subunit beta 4; Derived by automated computational analysis using gene prediction method: Gnomon.
pogo transposable element derived with ZNF domain; Derived by automated computational analysis using gene prediction method: Gnomon.
pogo transposable element derived with ZNF domain, transcript variant X3
pogo transposable element derived with ZNF domain, transcript variant X4
pogo transposable element derived with ZNF domain, transcript variant X1
pogo transposable element derived with ZNF domain, transcript variant X2
pogo transposable element with ZNF domain isoform X2
pogo transposable element with ZNF domain isoform X1
methanethiol oxidase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
methanethiol oxidase-like, transcript variant X5
methanethiol oxidase-like, transcript variant X6
methanethiol oxidase-like, transcript variant X4
methanethiol oxidase-like, transcript variant X3
methanethiol oxidase-like, transcript variant X1
methanethiol oxidase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
regulatory factor X5; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphatidylinositol 4-kinase beta; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphatidylinositol 4-kinase beta, transcript variant X2
phosphatidylinositol 4-kinase beta, transcript variant X1
phosphatidylinositol 4-kinase beta, transcript variant X3
phosphatidylinositol 4-kinase beta isoform X1
phosphatidylinositol 4-kinase beta isoform X2
zinc finger protein 687; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins
proteasome 26S subunit ubiquitin receptor, non-ATPase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
proteasome 26S subunit ubiquitin receptor, non-ATPase 4
26S proteasome non-ATPase regulatory subunit 4
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X4
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X3
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X5
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X7
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X1
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X2
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X6
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X4
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X3
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X5
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X6
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X7
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X2
vacuolar protein sorting 72 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 72 homolog
tropomodulin 4; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium channel modifier 1; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium channel modifier 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
sodium channel modifier 1, transcript variant X2
LysM domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
lysM and putative peptidoglycan-binding domain-containing protein 1
semaphorin 6C; Derived by automated computational analysis using gene prediction method: Gnomon.
GA binding protein transcription factor subunit beta 2; Derived by automated computational analysis using gene prediction method: Gnomon.
GA binding protein transcription factor subunit beta 2, transcript variant X2
GA binding protein transcription factor subunit beta 2, transcript variant X7
GA binding protein transcription factor subunit beta 2, transcript variant X6
GA binding protein transcription factor subunit beta 2, transcript variant X4
GA binding protein transcription factor subunit beta 2, transcript variant X5
GA binding protein transcription factor subunit beta 2, transcript variant X1
GA binding protein transcription factor subunit beta 2, transcript variant X3
GA-binding protein subunit beta-2 isoform X5
GA-binding protein subunit beta-2 isoform X4
GA-binding protein subunit beta-2 isoform X2
GA-binding protein subunit beta-2 isoform X3
GA-binding protein subunit beta-2 isoform X1
GA binding protein transcription factor subunit beta 2, transcript variant X8
GA-binding protein subunit beta-2 isoform X6
MLLT11 transcription factor 7 cofactor; Derived by automated computational analysis using gene prediction method: Gnomon.
MLLT11 transcription factor 7 cofactor, transcript variant X4
MLLT11 transcription factor 7 cofactor, transcript variant X3
MLLT11 transcription factor 7 cofactor, transcript variant X2
MLLT11 transcription factor 7 cofactor, transcript variant X1
CDC42 small effector 1; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC42 small effector 1, transcript variant X5
CDC42 small effector 1, transcript variant X2
CDC42 small effector 1, transcript variant X4
CDC42 small effector 1, transcript variant X6
CDC42 small effector 1, transcript variant X3
CDC42 small effector 1, transcript variant X1
prune exopolyphosphatase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
prune exopolyphosphatase 1, transcript variant X1
prune exopolyphosphatase 1, transcript variant X2
MINDY lysine 48 deubiquitinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
MINDY lysine 48 deubiquitinase 1, transcript variant X2
MINDY lysine 48 deubiquitinase 1, transcript variant X3
MINDY lysine 48 deubiquitinase 1, transcript variant X4
MINDY lysine 48 deubiquitinase 1, transcript variant X5
MINDY lysine 48 deubiquitinase 1, transcript variant X1
MINDY lysine 48 deubiquitinase 1, transcript variant X6
MINDY lysine 48 deubiquitinase 1, transcript variant X7
ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1
ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X2
ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X3
ceramide synthase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
SET domain bifurcated histone lysine methyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
SET domain bifurcated histone lysine methyltransferase 1, transcript variant X2
SET domain bifurcated histone lysine methyltransferase 1, transcript variant X1
histone-lysine N-methyltransferase SETDB1 isoform X1
SET domain bifurcated histone lysine methyltransferase 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins
histone-lysine N-methyltransferase SETDB1 isoform X3
SET domain bifurcated histone lysine methyltransferase 1, transcript variant X3
histone-lysine N-methyltransferase SETDB1 isoform X2
aryl hydrocarbon receptor nuclear translocator; Derived by automated computational analysis using gene prediction method: Gnomon.
aryl hydrocarbon receptor nuclear translocator, transcript variant X2
aryl hydrocarbon receptor nuclear translocator, transcript variant X3
aryl hydrocarbon receptor nuclear translocator isoform X2
aryl hydrocarbon receptor nuclear translocator isoform X3
aryl hydrocarbon receptor nuclear translocator, transcript variant X1
aryl hydrocarbon receptor nuclear translocator isoform X1
cathepsin K; Derived by automated computational analysis using gene prediction method: Gnomon.
cathepsin S; Derived by automated computational analysis using gene prediction method: Gnomon.
A-kinase anchor protein 13-like; Derived by automated computational analysis using gene prediction method: Gnomon.
OTU deubiquitinase 7B; Derived by automated computational analysis using gene prediction method: Gnomon.
OTU deubiquitinase 7B, transcript variant X4
OTU deubiquitinase 7B, transcript variant X2
OTU deubiquitinase 7B, transcript variant X1
OTU deubiquitinase 7B, transcript variant X3
vacuolar protein sorting 45 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting-associated protein 45
pleckstrin homology domain containing O1; Derived by automated computational analysis using gene prediction method: Gnomon.
pleckstrin homology domain containing O1
pleckstrin homology domain-containing family O member 1
pre-mRNA processing factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
pre-mRNA processing factor 3, transcript variant X1
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
pre-mRNA processing factor 3, transcript variant X3
pre-mRNA processing factor 3, transcript variant X4
pre-mRNA processing factor 3, transcript variant X2
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2
regulation of nuclear pre-mRNA domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
regulation of nuclear pre-mRNA domain containing 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 2 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 2
CD244 molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
CD48 molecule; Derived by automated computational analysis using gene prediction method: Gnomon.
signaling lymphocytic activation molecule family member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
signaling lymphocytic activation molecule family member 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
signaling lymphocytic activation molecule family member 1, transcript variant X2
signaling lymphocytic activation molecule
lymphocyte antigen 9; Derived by automated computational analysis using gene prediction method: Gnomon.
VANGL planar cell polarity protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 11 Proteins
uncharacterized LOC127394902; Derived by automated computational analysis using gene prediction method: Gnomon.
nescient helix-loop-helix 1; Derived by automated computational analysis using gene prediction method: Gnomon.
nicastrin; Derived by automated computational analysis using gene prediction method: Gnomon.
COPI coat complex subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A11; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A11, transcript variant X1
S100 calcium binding protein A11, transcript variant X2
trichohyalin; Derived by automated computational analysis using gene prediction method: Gnomon.
cornulin; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 10-7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
proline-rich protein 9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratinocyte proline-rich protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
involucrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
uncharacterized LOC127394824; Derived by automated computational analysis using gene prediction method: Gnomon.
claw keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
scale keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
feather keratin Cos1-1/Cos1-3/Cos2-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
feather keratin Cos1-1/Cos1-3/Cos2-1-like
feather beta keratin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
scale keratin-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
scale keratin-like, transcript variant X3
scale keratin-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127394921; Derived by automated computational analysis using gene prediction method: Gnomon.
feather keratin 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
feather beta keratin-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins
feather beta keratin-like, transcript variant X5
feather beta keratin-like, transcript variant X4
feather beta keratin-like, transcript variant X3
feather beta keratin-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins
feather beta keratin; Derived by automated computational analysis using gene prediction method: Gnomon.
feather beta keratin, transcript variant X2
feather beta keratin, transcript variant X1
feather beta keratin, transcript variant X3
beta-keratin-related protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins
outer dense fiber protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 21-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 19-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
loricrin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sperm mitochondrial-associated cysteine-rich protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sperm mitochondrial-associated cysteine-rich protein-like
putative small proline-rich protein 5; Derived by automated computational analysis using gene prediction method: Gnomon.
keratin-associated protein 5-4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sericin-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein MRP-126-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein S100-A9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
S100 calcium binding protein A4; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127394901; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127394901, transcript variant X7
uncharacterized LOC127394901, transcript variant X6
uncharacterized LOC127394901, transcript variant X5
uncharacterized LOC127394901, transcript variant X4
uncharacterized LOC127394901, transcript variant X3
uncharacterized LOC127394901, transcript variant X1
uncharacterized LOC127394901, transcript variant X2
myocyte enhancer factor 2D; Derived by automated computational analysis using gene prediction method: Gnomon.
myocyte enhancer factor 2D, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins
myocyte enhancer factor 2D, transcript variant X4
myocyte enhancer factor 2D, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins
myocyte enhancer factor 2D, transcript variant X12
myocyte enhancer factor 2D, transcript variant X3
myocyte enhancer factor 2D, transcript variant X1
myocyte enhancer factor 2D, transcript variant X8
myocyte enhancer factor 2D, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins
myocyte enhancer factor 2D, transcript variant X10
myocyte enhancer factor 2D, transcript variant X9
myocyte enhancer factor 2D, transcript variant X6
myocyte enhancer factor 2D, transcript variant X7
myocyte enhancer factor 2D, transcript variant X2
myocyte-specific enhancer factor 2D isoform X12
myocyte-specific enhancer factor 2D isoform X11
myocyte-specific enhancer factor 2D isoform X8
myocyte-specific enhancer factor 2D isoform X7
myocyte-specific enhancer factor 2D isoform X10
myocyte-specific enhancer factor 2D isoform X9
myocyte-specific enhancer factor 2D isoform X6
myocyte-specific enhancer factor 2D isoform X5
myocyte-specific enhancer factor 2D isoform X4
myocyte-specific enhancer factor 2D isoform X3
myocyte-specific enhancer factor 2D isoform X2
myocyte-specific enhancer factor 2D isoform X1
tetratricopeptide repeat domain 24; Derived by automated computational analysis using gene prediction method: Gnomon.
NAD(P)HX epimerase; Derived by automated computational analysis using gene prediction method: Gnomon.
NAD(P)HX epimerase, transcript variant X1
NAD(P)HX epimerase, transcript variant X2
G-patch domain containing 4; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquilin 4; Derived by automated computational analysis using gene prediction method: Gnomon.
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2; Derived by automated computational analysis using gene prediction method: Gnomon.
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
RAB25, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
ras-related protein Rab-11A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 116 Proteins
mex-3 RNA binding family member A; Derived by automated computational analysis using gene prediction method: Gnomon.
lamin A/C; Derived by automated computational analysis using gene prediction method: Gnomon.
semaphorin 4A; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 25 member 44; Derived by automated computational analysis using gene prediction method: Gnomon.
polyamine modulated factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
bone gamma-carboxyglutamate protein; Derived by automated computational analysis using gene prediction method: Gnomon.
progestin and adipoQ receptor family member 6; Derived by automated computational analysis using gene prediction method: Gnomon.
progestin and adipoQ receptor family member 6
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: membrane progestin receptor delta
SMG5 nonsense mediated mRNA decay factor; Derived by automated computational analysis using gene prediction method: Gnomon.
SMG5 nonsense mediated mRNA decay factor, transcript variant X1
SMG5 nonsense mediated mRNA decay factor, transcript variant X2
nonsense-mediated mRNA decay factor SMG5 isoform X1
nonsense-mediated mRNA decay factor SMG5 isoform X2
transmembrane protein 79; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins
glycosylated lysosomal membrane protein; Derived by automated computational analysis using gene prediction method: Gnomon.
glycosylated lysosomal membrane protein, transcript variant X1
glycosylated lysosomal membrane protein, transcript variant X2
glycosylated lysosomal membrane protein isoform X1
glycosylated lysosomal membrane protein isoform X2
chaperonin containing TCP1 subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
signal sequence receptor subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
signal sequence receptor subunit 2, transcript variant X2
signal sequence receptor subunit 2, transcript variant X1
translocon-associated protein subunit beta
tropomyosin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 7 Proteins
chromosome 27 C1orf43 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 27 C1orf43 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins
chromosome 27 C1orf43 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein
ubiquitin associated protein 2 like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin associated protein 2 like, transcript variant X10
ubiquitin associated protein 2 like, transcript variant X11
ubiquitin associated protein 2 like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins
ubiquitin associated protein 2 like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins
ubiquitin associated protein 2 like, transcript variant X5
ubiquitin associated protein 2 like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins
ubiquitin associated protein 2 like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins
ubiquitin associated protein 2 like, transcript variant X13
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 Proteins
ubiquitin associated protein 2 like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins
ubiquitin associated protein 2 like, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins
ubiquitin associated protein 2 like, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins
ubiquitin associated protein 2 like, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 9 Proteins
ubiquitin associated protein 2 like, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 8 Proteins
ubiquitin-associated protein 2-like isoform X9
ubiquitin-associated protein 2-like isoform X10
ubiquitin-associated protein 2-like isoform X1
ubiquitin-associated protein 2-like isoform X4
ubiquitin-associated protein 2-like isoform X5
ubiquitin-associated protein 2-like isoform X3
ubiquitin-associated protein 2-like isoform X12
ubiquitin-associated protein 2-like isoform X2
ubiquitin-associated protein 2-like isoform X6
ubiquitin-associated protein 2-like isoform X7
ubiquitin-associated protein 2-like isoform X8
ubiquitin-associated protein 2-like isoform X11
HCLS1 associated protein X-1; Derived by automated computational analysis using gene prediction method: Gnomon.
aquaporin 10; Derived by automated computational analysis using gene prediction method: Gnomon.
ATPase phospholipid transporting 8B2; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 6 receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 6 receptor, transcript variant X1
interleukin 6 receptor, transcript variant X2
interleukin-6 receptor subunit alpha isoform X1
interleukin-6 receptor subunit alpha isoform X2
Src homology 2 domain containing E; Derived by automated computational analysis using gene prediction method: Gnomon.
Src homology 2 domain containing E, transcript variant X2
Src homology 2 domain containing E, transcript variant X1
SH2 domain-containing adapter protein E isoform X2
SH2 domain-containing adapter protein E isoform X1
ubiquitin conjugating enzyme E2 Q1; Derived by automated computational analysis using gene prediction method: Gnomon.
cholinergic receptor nicotinic beta 2 subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
cholinergic receptor nicotinic beta 2 subunit
LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit beta-2
adenosine deaminase RNA specific; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: double-stranded RNA-specific adenosine deaminase
potassium calcium-activated channel subfamily N member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
potassium calcium-activated channel subfamily N member 3, transcript variant X2
potassium calcium-activated channel subfamily N member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
small conductance calcium-activated potassium channel protein 3 isoform X2
small conductance calcium-activated potassium channel protein 3 isoform X1
phosphomevalonate kinase; Derived by automated computational analysis using gene prediction method: Gnomon.
phosphomevalonate kinase, transcript variant X2
phosphomevalonate kinase, transcript variant X1
PBX homeobox interacting protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
pre-B-cell leukemia transcription factor-interacting protein 1
pygopus family PHD finger 2; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
SHC adaptor protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
SHC adaptor protein 1, transcript variant X4
SHC adaptor protein 1, transcript variant X2
SHC adaptor protein 1, transcript variant X3
SHC adaptor protein 1, transcript variant X1
CDC28 protein kinase regulatory subunit 1B; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC28 protein kinase regulatory subunit 1B, transcript variant X2
cyclin-dependent kinases regulatory subunit 1 isoform X2
CDC28 protein kinase regulatory subunit 1B, transcript variant X1
cyclin-dependent kinases regulatory subunit 1 isoform X1
flavin adenine dinucleotide synthetase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
flavin adenine dinucleotide synthetase 1
mothers against decapentaplegic homolog 6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
mothers against decapentaplegic homolog 6-like
zinc finger and BTB domain containing 7B; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 7B
zinc finger and BTB domain-containing protein 7B
DC-STAMP domain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
DC-STAMP domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase domain 15; Derived by automated computational analysis using gene prediction method: Gnomon.
ADAM metallopeptidase domain 15, transcript variant X1
ADAM metallopeptidase domain 15, transcript variant X3
ADAM metallopeptidase domain 15, transcript variant X4
ADAM metallopeptidase domain 15, transcript variant X5
ADAM metallopeptidase domain 15, transcript variant X2
disintegrin and metalloproteinase domain-containing protein 15 isoform X1
disintegrin and metalloproteinase domain-containing protein 15 isoform X3
disintegrin and metalloproteinase domain-containing protein 15 isoform X4
disintegrin and metalloproteinase domain-containing protein 15 isoform X5
disintegrin and metalloproteinase domain-containing protein 15 isoform X2
ephrin A4; Derived by automated computational analysis using gene prediction method: Gnomon.
ephrin A3; Derived by automated computational analysis using gene prediction method: Gnomon.
ephrin A1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 50 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 50 member 1, transcript variant X2
solute carrier family 50 member 1, transcript variant X3
solute carrier family 50 member 1, transcript variant X1
dolichyl-phosphate mannosyltransferase subunit 3, regulatory; Derived by automated computational analysis using gene prediction method: Gnomon.
dolichyl-phosphate mannosyltransferase subunit 3, regulatory
dolichol-phosphate mannosyltransferase subunit 3
keratinocyte associated protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
keratinocyte associated protein 2, transcript variant X1
keratinocyte associated protein 2, transcript variant X2
keratinocyte-associated protein 2 isoform X1
keratinocyte-associated protein 2 isoform X2
tripartite motif containing 46; Derived by automated computational analysis using gene prediction method: Gnomon.
mucin 1, cell surface associated; Derived by automated computational analysis using gene prediction method: Gnomon.
thrombospondin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
metaxin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
lysosomal acid glucosylceramidase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
LOW QUALITY PROTEIN: lysosomal acid glucosylceramidase-like
endosomal transmembrane epsin interactor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
endosomal transmembrane epsin interactor 3, transcript variant X4
endosomal transmembrane epsin interactor 3, transcript variant X2
endosomal transmembrane epsin interactor 3, transcript variant X1
endosomal transmembrane epsin interactor 3, transcript variant X3
secretory carrier membrane protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
secretory carrier membrane protein 3, transcript variant X2
secretory carrier membrane protein 3, transcript variant X1
secretory carrier-associated membrane protein 3 isoform X2
secretory carrier-associated membrane protein 3 isoform X1
CDC like kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
CDC like kinase 2, transcript variant X1
CDC like kinase 2, transcript variant X2
dual specificity protein kinase CLK2 isoform X2
dual specificity protein kinase CLK2 isoform X1
hyperpolarization activated cyclic nucleotide gated potassium channel 3; Derived by automated computational analysis using gene prediction method: Gnomon.
hyperpolarization activated cyclic nucleotide gated potassium channel 3, transcript variant X1
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1
hyperpolarization activated cyclic nucleotide gated potassium channel 3, transcript variant X2
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X2
farnesyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Gnomon.
RUN and SH3 domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
RUN and SH3 domain containing 1, transcript variant X1
RUN and SH3 domain containing 1, transcript variant X3
RUN and SH3 domain containing 1, transcript variant X4
RUN and SH3 domain containing 1, transcript variant X2
ASH1 like histone lysine methyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
ASH1 like histone lysine methyltransferase, transcript variant X2
ASH1 like histone lysine methyltransferase, transcript variant X1
histone-lysine N-methyltransferase ASH1L isoform X2
histone-lysine N-methyltransferase ASH1L isoform X1
death associated protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
28S ribosomal protein S29, mitochondrial
misato mitochondrial distribution and morphology regulator 1; Derived by automated computational analysis using gene prediction method: Gnomon.
misato mitochondrial distribution and morphology regulator 1, transcript variant X7
misato mitochondrial distribution and morphology regulator 1, transcript variant X1
misato mitochondrial distribution and morphology regulator 1, transcript variant X2
misato mitochondrial distribution and morphology regulator 1, transcript variant X5
misato mitochondrial distribution and morphology regulator 1, transcript variant X8
misato mitochondrial distribution and morphology regulator 1, transcript variant X3
misato mitochondrial distribution and morphology regulator 1, transcript variant X4
misato mitochondrial distribution and morphology regulator 1, transcript variant X6
GON-4-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
GON-4-like protein, transcript variant X2
GON-4-like protein, transcript variant X3
GON-4-like protein, transcript variant X1
GON-4-like protein, transcript variant X5
GON-4-like protein, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins
synaptotagmin 11; Derived by automated computational analysis using gene prediction method: Gnomon.
Ras like without CAAX 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Ras like without CAAX 1, transcript variant X1
Ras like without CAAX 1, transcript variant X2
KH domain containing 4, pre-mRNA splicing factor; Derived by automated computational analysis using gene prediction method: Gnomon.
KH domain containing 4, pre-mRNA splicing factor, transcript variant X2
KH domain containing 4, pre-mRNA splicing factor, transcript variant X1
KH homology domain-containing protein 4 isoform X2
KH homology domain-containing protein 4 isoform X1
KH domain containing 4, pre-mRNA splicing factor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs
KH homology domain-containing protein 4 isoform X3
small Cajal body-specific RNA 4; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00423
Derived by automated computational analysis using gene prediction method: cmsearch.
EF-hand calcium binding domain 12; Derived by automated computational analysis using gene prediction method: Gnomon.
EF-hand calcium-binding domain-containing protein 12
HORMA domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
HORMA domain containing 1, transcript variant X1
HORMA domain containing 1, transcript variant X2
HORMA domain containing 1, transcript variant X4
HORMA domain containing 1, transcript variant X3
HORMA domain-containing protein 1 isoform X1
HORMA domain-containing protein 1 isoform X3
HORMA domain-containing protein 1 isoform X2
golgi phosphoprotein 3 like; Derived by automated computational analysis using gene prediction method: Gnomon.
golgi phosphoprotein 3 like, transcript variant X2
golgi phosphoprotein 3 like, transcript variant X1
endosulfine alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
MCL1 apoptosis regulator, BCL2 family member; Derived by automated computational analysis using gene prediction method: Gnomon.
MCL1 apoptosis regulator, BCL2 family member
induced myeloid leukemia cell differentiation protein Mcl-1
uncharacterized LOC127394991; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127394991, transcript variant X1
uncharacterized LOC127394991, transcript variant X2
ubiquitin carboxyl-terminal hydrolase 42-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin carboxyl-terminal hydrolase 42-like
antigen WC1.1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
histone acetyltransferase KAT7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
LOW QUALITY PROTEIN: histone acetyltransferase KAT7-like
uncharacterized LOC127394967; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC127394961; Derived by automated computational analysis using gene prediction method: Gnomon.
olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.