Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome W, BPBGC_Ojam_1.0, whole genome shotgun sequence.
type: Entry
definition: Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome W, BPBGC_Ojam_1.0, whole genome shotgun sequence.
sequence version: NC_048925.1
sequence date: 2020-07-05
sequence: sequence
division: CON
label: NC_048925.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA641662
dblink: SAMN13257492
keyword: WGS
keyword: RefSeq
source: Oxyura jamaicensis (ruddy duck)
organism: Oxyura jamaicensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021832.1.\nAssembly name: BPBGC_Ojam_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2020/03/10. The original whole-genome shotgun project\nhas the accession JAACYN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Date :: 01-SEP-2019\nAssembly Method :: Supernova 2 v. SEPT-2019\nAssembly Name :: BPBGC_Ojam_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Oxyura jamaicensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 814976
topology: linear
so has quality: SO_0000987
location: 1..814976
location: region:1-814976:1
RO_0002162: 8884

NC_048925
type: RefSeq
SIO_000068: refseq

PRJNA641662
type: BioProject
SIO_000068: bioproject

SAMN13257492
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814976:1
position: 814976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-814976:1:source
so part of: sequence
organism: Oxyura jamaicensis
mol type: genomic DNA
isolate: SHBP4307
chromosome: W
sex: female
tissue type: blood
dev stage: adult
country: USA: Scotland Neck, NC
breed: ruddy duck

8884
type: Taxonomy
SIO_000068: taxonomy

LOC118155650
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5067..118452
location: region:5067-118452:1
so has part: feature:5067-118452:1:exon
subclass of: SO_0000010

118155650
type: Gene
SIO_000068: ncbigene

position:5067:1
position: 5067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118452:1
position: 118452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5067-118452:1:exon

LOC118155650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155650
product: ras GTPase-activating protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035309034.1
SIO_010081: LOC118155650
subclass of: SO_0000673
so part of: LOC118155650
location: join(5067..5734,21982..22131,25009..25144,52484..52554,56359..56476,57157..57188,59004..59056,59776..59926,65921..65999,67657..67777,69651..69807,70526..70613,72779..72856,77904..78025,101617..101703,106619..106686,111256..111344,113045..113122,114353..114487,117631..118452)
location: region:5067-118452:1
so has part: feature:5067-5734:1:exon
so has part: feature:21982-22131:1:exon
so has part: feature:25009-25144:1:exon
so has part: feature:52484-52554:1:exon
so has part: feature:56359-56476:1:exon
so has part: feature:57157-57188:1:exon
so has part: feature:59004-59056:1:exon
so has part: feature:59776-59926:1:exon
so has part: feature:65921-65999:1:exon
so has part: feature:67657-67777:1:exon
so has part: feature:69651-69807:1:exon
so has part: feature:70526-70613:1:exon
so has part: feature:72779-72856:1:exon
so has part: feature:77904-78025:1:exon
so has part: feature:101617-101703:1:exon
so has part: feature:106619-106686:1:exon
so has part: feature:111256-111344:1:exon
so has part: feature:113045-113122:1:exon
so has part: feature:114353-114487:1:exon
so has part: feature:117631-118452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5067-5734:1:exon

position:5734:1
position: 5734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21982-22131:1:exon

position:21982:1
position: 21982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22131:1
position: 22131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25009-25144:1:exon

position:25009:1
position: 25009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25144:1
position: 25144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52484-52554:1:exon

position:52484:1
position: 52484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52554:1
position: 52554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:56359-56476:1:exon

position:56359:1
position: 56359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56476:1
position: 56476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57157-57188:1:exon

position:57157:1
position: 57157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57188:1
position: 57188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:59004-59056:1:exon

position:59004:1
position: 59004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59056:1
position: 59056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:59776-59926:1:exon

position:59776:1
position: 59776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59926:1
position: 59926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:65921-65999:1:exon

position:65921:1
position: 65921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65999:1
position: 65999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67657-67777:1:exon

position:67657:1
position: 67657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67777:1
position: 67777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:69651-69807:1:exon

position:69651:1
position: 69651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69807:1
position: 69807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:70526-70613:1:exon

position:70526:1
position: 70526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70613:1
position: 70613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:72779-72856:1:exon

position:72779:1
position: 72779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72856:1
position: 72856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:77904-78025:1:exon

position:77904:1
position: 77904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78025:1
position: 78025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:101617-101703:1:exon

position:101617:1
position: 101617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101703:1
position: 101703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:106619-106686:1:exon

position:106619:1
position: 106619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106686:1
position: 106686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:111256-111344:1:exon

position:111256:1
position: 111256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111344:1
position: 111344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:113045-113122:1:exon

position:113045:1
position: 113045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113122:1
position: 113122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:114353-114487:1:exon

position:114353:1
position: 114353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114487:1
position: 114487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:117631-118452:1:exon

position:117631:1
position: 117631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 1-like
translation: MMAAEGEEDVSVTSVRMIGTVGRAEPGHYPALWRSKELGSQGHFLVGSGKDSSGASGPALCSALGLLALGSGSAPLASGGGGAVTPASQGPEVSGGALPEPGSVVFSLLPLQPSSLAGGLGTVDEGDSLDGPEYEEEEVAIPLNAPPTNQWYHGKLERAIAEERLWQAGKPGTYLIRESDRRPGSFVLSFLSKTNVNHFRIIAMCGDYYIGGRRFASLLDLIGYYSHVSCLLKGEKLFFPVAPPEPVEDRRRVRAILPYTKVPETDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVDDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTSENIQRFKICPTSNNQFMMGGRYYNSIDEIIEHYRKEQIVEGYYLKDPVPMQHQEQVLNNTVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKSKGKRWKNLYFILEGNDAHLIYFESEKRATKPKGLIDLSVCSIYGVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQTQDWMKALQMFCSLRKNNPGKSNKRLRQVSSLILHVEEAHTLPVKHFTNLYCNIYRNTPLGGGITNHSRTLRYIYGCLQKSVQNKWPANTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPTAARTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRYLAALHEMCVAHSDELRTLSNERGVMQHVLKKLLAITELLQQKQNQYLVSNNIR
SIO_010081: LOC118155650
subclass of: SO_0000673
so part of: LOC118155650
location: join(5286..5734,21982..22131,25009..25144,52484..52554,56359..56476,57157..57188,59004..59056,59776..59926,65921..65999,67657..67777,69651..69807,70526..70613,72779..72856,77904..78025,101617..101703,106619..106686,111256..111344,113045..113122,114353..114487,117631..117714)
location: region:5286-117714:1
so has part: feature:5286-5734:1:exon
so has part: feature:21982-22131:1:exon
so has part: feature:25009-25144:1:exon
so has part: feature:52484-52554:1:exon
so has part: feature:56359-56476:1:exon
so has part: feature:57157-57188:1:exon
so has part: feature:59004-59056:1:exon
so has part: feature:59776-59926:1:exon
so has part: feature:65921-65999:1:exon
so has part: feature:67657-67777:1:exon
so has part: feature:69651-69807:1:exon
so has part: feature:70526-70613:1:exon
so has part: feature:72779-72856:1:exon
so has part: feature:77904-78025:1:exon
so has part: feature:101617-101703:1:exon
so has part: feature:106619-106686:1:exon
so has part: feature:111256-111344:1:exon
so has part: feature:113045-113122:1:exon
so has part: feature:114353-114487:1:exon
so has part: feature:117631-117714:1:exon

XP_035164925.1
type: Protein
SIO_000068: ncbiprotein

position:5286:1
position: 5286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117714:1
position: 117714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5286-5734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21982-22131:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25009-25144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52484-52554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56359-56476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57157-57188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59004-59056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:59776-59926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:65921-65999:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67657-67777:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69651-69807:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70526-70613:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:72779-72856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77904-78025:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101617-101703:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106619-106686:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111256-111344:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:113045-113122:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:114353-114487:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:117631-117714:1:exon

LOC118155643
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(56833..93816)
location: region:56833-93816:-1
so has part: feature:56833-93816:-1:exon
subclass of: SO_0000010

118155643
type: Gene
SIO_000068: ncbigene

position:56833:-1
position: 56833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93816:-1
position: 93816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56833-93816:-1:exon

LOC118155643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155643
product: ras GTPase-activating protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035309029.1
SIO_010081: LOC118155643
subclass of: SO_0000673
so part of: LOC118155643
location: complement(join(56833..56850,66915..66921,80104..80223,81002..81144,81340..81499,81687..81859,85058..85134,85427..85584,90626..90703,92869..93816))
location: region:56833-93816:-1
so has part: feature:92869-93816:-1:exon
so has part: feature:90626-90703:-1:exon
so has part: feature:85427-85584:-1:exon
so has part: feature:85058-85134:-1:exon
so has part: feature:81687-81859:-1:exon
so has part: feature:81340-81499:-1:exon
so has part: feature:81002-81144:-1:exon
so has part: feature:80104-80223:-1:exon
so has part: feature:66915-66921:-1:exon
so has part: feature:56833-56850:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92869-93816:-1:exon

position:92869:-1
position: 92869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90626-90703:-1:exon

position:90626:-1
position: 90626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90703:-1
position: 90703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85427-85584:-1:exon

position:85427:-1
position: 85427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85584:-1
position: 85584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85058-85134:-1:exon

position:85058:-1
position: 85058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85134:-1
position: 85134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81687-81859:-1:exon

position:81687:-1
position: 81687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81859:-1
position: 81859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:81340-81499:-1:exon

position:81340:-1
position: 81340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81499:-1
position: 81499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:81002-81144:-1:exon

position:81002:-1
position: 81002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81144:-1
position: 81144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:80104-80223:-1:exon

position:80104:-1
position: 80104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80223:-1
position: 80223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:66915-66921:-1:exon

position:66915:-1
position: 66915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66921:-1
position: 66921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:56833-56850:-1:exon

position:56850:-1
position: 56850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118155643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 1-like
translation: MGFVPLLRPNCFQIVVQHFSEEHYIFYFAGETPEQTQDWMKALQMFCSLRKNNPGKSNKRLRQVSSLILHVEEAHTLPVKHFTNPYCNIYLNSVQVAKTHIREGQNPVWSEEFVFDDLSSDINRFEISLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFQLSSHIPLKGIEPGSLRVRVRYSMEKIMPEEEYSEFKELILQKELHVVYALSHVCGQNRTLLAGILLKIFLHEKLESLLLRTLNDKEISMEDEATTLFRATTLASTLMEQYMKATATRFVHHALKDCILKIMESKQSCELNPSKLEKNEDINTNLAHLLSILSELVEKIFMAAEILPP
SIO_010081: LOC118155643
subclass of: SO_0000673
so part of: LOC118155643
location: complement(join(80104..80223,81002..81144,81340..81499,81687..81859,85058..85134,85427..85584,90626..90703,92869..92979))
location: region:80104-92979:-1
so has part: feature:92869-92979:-1:exon
so has part: feature:90626-90703:-1:exon
so has part: feature:85427-85584:-1:exon
so has part: feature:85058-85134:-1:exon
so has part: feature:81687-81859:-1:exon
so has part: feature:81340-81499:-1:exon
so has part: feature:81002-81144:-1:exon
so has part: feature:80104-80223:-1:exon

XP_035164920.1
type: Protein
SIO_000068: ncbiprotein

position:92979:-1
position: 92979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92869-92979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90626-90703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85427-85584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85058-85134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81687-81859:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81340-81499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81002-81144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80104-80223:-1:exon

LOC118155647
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197325..211529)
location: region:197325-211529:-1
so has part: feature:197325-211529:-1:exon
subclass of: SO_0000011

118155647
type: Gene
SIO_000068: ncbigene

position:197325:-1
position: 197325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211529:-1
position: 211529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197325-211529:-1:exon

LOC118155647
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118155647
product: uncharacterized LOC118155647
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_004745928.1
SIO_010081: LOC118155647
subclass of: SO_0000673
so part of: LOC118155647
location: complement(join(197325..197335,197439..197446,198274..198277,199181..199186,211383..211529))
location: region:197325-211529:-1
so has part: feature:211383-211529:-1:exon
so has part: feature:199181-199186:-1:exon
so has part: feature:198274-198277:-1:exon
so has part: feature:197439-197446:-1:exon
so has part: feature:197325-197335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211383-211529:-1:exon

position:211383:-1
position: 211383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199181-199186:-1:exon

position:199181:-1
position: 199181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199186:-1
position: 199186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198274-198277:-1:exon

position:198274:-1
position: 198274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198277:-1
position: 198277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197439-197446:-1:exon

position:197439:-1
position: 197439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197446:-1
position: 197446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197325-197335:-1:exon

position:197335:-1
position: 197335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118155646
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 227093..251259
location: region:227093-251259:1
so has part: feature:227093-251259:1:exon
subclass of: SO_0000011

118155646
type: Gene
SIO_000068: ncbigene

position:227093:1
position: 227093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251259:1
position: 251259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227093-251259:1:exon

LOC118155646
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118155646
product: uncharacterized LOC118155646, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004745927.1
SIO_010081: LOC118155646
subclass of: SO_0000673
so part of: LOC118155646
location: join(227093..227326,227980..229014,229774..229841,249683..249802,249978..251259)
location: region:227093-251259:1
so has part: feature:227093-227326:1:exon
so has part: feature:227980-229014:1:exon
so has part: feature:229774-229841:1:exon
so has part: feature:249683-249802:1:exon
so has part: feature:249978-251259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227093-227326:1:exon

position:227326:1
position: 227326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227980-229014:1:exon

position:227980:1
position: 227980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229014:1
position: 229014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:229774-229841:1:exon

position:229774:1
position: 229774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229841:1
position: 229841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249683-249802:1:exon

position:249683:1
position: 249683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249802:1
position: 249802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249978-251259:1:exon

position:249978:1
position: 249978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155646
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118155646
product: uncharacterized LOC118155646, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004745926.1
SIO_010081: LOC118155646
subclass of: SO_0000673
so part of: LOC118155646
location: join(227094..227312,227980..229014,229774..229841,249683..249802,249978..251259)
location: region:227094-251259:1
so has part: feature:227094-227312:1:exon
so has part: feature:227980-229014:1:exon
so has part: feature:229774-229841:1:exon
so has part: feature:249683-249802:1:exon
so has part: feature:249978-251259:1:exon

position:227094:1
position: 227094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227094-227312:1:exon

position:227312:1
position: 227312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227980-229014:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229774-229841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249683-249802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249978-251259:1:exon

LOC118155645
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 262272..283845
location: region:262272-283845:1
so has part: feature:262272-283845:1:exon
subclass of: SO_0000010

118155645
type: Gene
SIO_000068: ncbigene

position:262272:1
position: 262272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283845:1
position: 283845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262272-283845:1:exon

LOC118155645
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155645
product: vasculin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_035309033.1
SIO_010081: LOC118155645
subclass of: SO_0000673
so part of: LOC118155645
location: join(262272..262413,273858..274042,276210..276350,276844..277002,283620..283845)
location: region:262272-283845:1
so has part: feature:262272-262413:1:exon
so has part: feature:273858-274042:1:exon
so has part: feature:276210-276350:1:exon
so has part: feature:276844-277002:1:exon
so has part: feature:283620-283845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:262272-262413:1:exon

position:262413:1
position: 262413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273858-274042:1:exon

position:273858:1
position: 273858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274042:1
position: 274042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276210-276350:1:exon

position:276210:1
position: 276210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276350:1
position: 276350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:276844-277002:1:exon

position:276844:1
position: 276844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277002:1
position: 277002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283620-283845:1:exon

position:283620:1
position: 283620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasculin-like
translation: MLVIKKGSTKELQISGFPLVGSLHSQLVKNGTGTSVYKGLVPKPATPPAKTMQWKSQAKENKTGILFPHESGYGIGNFSPFKSNTKAIPVSQNSVKECNESNSSSSVDKVGQPRLTKLTRMRTDKKSEFLKALKQRMEEHKDENHAEQEKEK
SIO_010081: LOC118155645
subclass of: SO_0000673
so part of: LOC118155645
location: join(273893..274042,276210..276350,276844..277002,283620..283628)
location: region:273893-283628:1
so has part: feature:273893-274042:1:exon
so has part: feature:276210-276350:1:exon
so has part: feature:276844-277002:1:exon
so has part: feature:283620-283628:1:exon

XP_035164924.1
type: Protein
SIO_000068: ncbiprotein

position:273893:1
position: 273893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283628:1
position: 283628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273893-274042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276210-276350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276844-277002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283620-283628:1:exon

LOC118155637
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 287264..363302
location: region:287264-363302:1
so has part: feature:287264-363302:1:exon
subclass of: SO_0000010

118155637
type: Gene
SIO_000068: ncbigene

position:287264:1
position: 287264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363302:1
position: 363302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287264-363302:1:exon

LOC118155637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155637
product: nipped-B-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035309022.1
SIO_010081: LOC118155637
subclass of: SO_0000673
so part of: LOC118155637
location: join(287264..287318,288765..289394,305582..307069,315896..316078,318384..318581,318767..318838,318926..319015,320014..320117,321584..321670,323322..323553,324994..325145,325541..325621,328639..328739,330049..330187,330396..330478,331534..331666,333098..333241,336956..337045,337292..337506,337602..337704,339883..339981,340080..340226,341379..341513,342970..343068,344198..344251,346593..346701,347307..347443,350164..350304,350625..350718,350829..350983,351245..351335,355199..355372,355915..356105,356764..356871,358219..358419,358819..358965,360445..360740,361063..361237,361547..361732,362288..363302)
location: region:287264-363302:1
so has part: feature:287264-287318:1:exon
so has part: feature:288765-289394:1:exon
so has part: feature:305582-307069:1:exon
so has part: feature:315896-316078:1:exon
so has part: feature:318384-318581:1:exon
so has part: feature:318767-318838:1:exon
so has part: feature:318926-319015:1:exon
so has part: feature:320014-320117:1:exon
so has part: feature:321584-321670:1:exon
so has part: feature:323322-323553:1:exon
so has part: feature:324994-325145:1:exon
so has part: feature:325541-325621:1:exon
so has part: feature:328639-328739:1:exon
so has part: feature:330049-330187:1:exon
so has part: feature:330396-330478:1:exon
so has part: feature:331534-331666:1:exon
so has part: feature:333098-333241:1:exon
so has part: feature:336956-337045:1:exon
so has part: feature:337292-337506:1:exon
so has part: feature:337602-337704:1:exon
so has part: feature:339883-339981:1:exon
so has part: feature:340080-340226:1:exon
so has part: feature:341379-341513:1:exon
so has part: feature:342970-343068:1:exon
so has part: feature:344198-344251:1:exon
so has part: feature:346593-346701:1:exon
so has part: feature:347307-347443:1:exon
so has part: feature:350164-350304:1:exon
so has part: feature:350625-350718:1:exon
so has part: feature:350829-350983:1:exon
so has part: feature:351245-351335:1:exon
so has part: feature:355199-355372:1:exon
so has part: feature:355915-356105:1:exon
so has part: feature:356764-356871:1:exon
so has part: feature:358219-358419:1:exon
so has part: feature:358819-358965:1:exon
so has part: feature:360445-360740:1:exon
so has part: feature:361063-361237:1:exon
so has part: feature:361547-361732:1:exon
so has part: feature:362288-363302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287264-287318:1:exon

position:287318:1
position: 287318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288765-289394:1:exon

position:288765:1
position: 288765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289394:1
position: 289394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305582-307069:1:exon

position:305582:1
position: 305582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307069:1
position: 307069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315896-316078:1:exon

position:315896:1
position: 315896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316078:1
position: 316078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:318384-318581:1:exon

position:318384:1
position: 318384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318581:1
position: 318581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:318767-318838:1:exon

position:318767:1
position: 318767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318838:1
position: 318838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:318926-319015:1:exon

position:318926:1
position: 318926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319015:1
position: 319015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:320014-320117:1:exon

position:320014:1
position: 320014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320117:1
position: 320117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321584-321670:1:exon

position:321584:1
position: 321584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321670:1
position: 321670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:323322-323553:1:exon

position:323322:1
position: 323322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323553:1
position: 323553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:324994-325145:1:exon

position:324994:1
position: 324994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325145:1
position: 325145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:325541-325621:1:exon

position:325541:1
position: 325541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325621:1
position: 325621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:328639-328739:1:exon

position:328639:1
position: 328639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328739:1
position: 328739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:330049-330187:1:exon

position:330049:1
position: 330049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330187:1
position: 330187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:330396-330478:1:exon

position:330396:1
position: 330396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330478:1
position: 330478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:331534-331666:1:exon

position:331534:1
position: 331534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331666:1
position: 331666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:333098-333241:1:exon

position:333098:1
position: 333098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333241:1
position: 333241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:336956-337045:1:exon

position:336956:1
position: 336956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337045:1
position: 337045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:337292-337506:1:exon

position:337292:1
position: 337292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337506:1
position: 337506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:337602-337704:1:exon

position:337602:1
position: 337602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337704:1
position: 337704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:339883-339981:1:exon

position:339883:1
position: 339883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339981:1
position: 339981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:340080-340226:1:exon

position:340080:1
position: 340080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340226:1
position: 340226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:341379-341513:1:exon

position:341379:1
position: 341379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341513:1
position: 341513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:342970-343068:1:exon

position:342970:1
position: 342970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343068:1
position: 343068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:344198-344251:1:exon

position:344198:1
position: 344198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344251:1
position: 344251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:346593-346701:1:exon

position:346593:1
position: 346593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346701:1
position: 346701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:347307-347443:1:exon

position:347307:1
position: 347307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347443:1
position: 347443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:350164-350304:1:exon

position:350164:1
position: 350164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350304:1
position: 350304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:350625-350718:1:exon

position:350625:1
position: 350625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350718:1
position: 350718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:350829-350983:1:exon

position:350829:1
position: 350829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350983:1
position: 350983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:351245-351335:1:exon

position:351245:1
position: 351245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351335:1
position: 351335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:355199-355372:1:exon

position:355199:1
position: 355199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355372:1
position: 355372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:355915-356105:1:exon

position:355915:1
position: 355915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356105:1
position: 356105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:356764-356871:1:exon

position:356764:1
position: 356764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356871:1
position: 356871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:358219-358419:1:exon

position:358219:1
position: 358219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358419:1
position: 358419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:358819-358965:1:exon

position:358819:1
position: 358819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358965:1
position: 358965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:360445-360740:1:exon

position:360445:1
position: 360445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360740:1
position: 360740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:361063-361237:1:exon

position:361063:1
position: 361063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361237:1
position: 361237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:361547-361732:1:exon

position:361547:1
position: 361547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361732:1
position: 361732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:362288-363302:1:exon

position:362288:1
position: 362288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nipped-B-like protein
translation: MWILLAKYGVVSHSQGELGSRPPLILQSQHPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKNSTKLTLRLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNHPLNTAQCLPQHEQTAFLQAQVPVLQQNTSVGAKQPQTPVVQTQQQVSQQGTITSFDEVELDALAEIERIERESAIERERFSKEVQDKDKPLKKRKQENKPQEAGSTTGGNRPASQETGSAGNGARPALMVSIDLQQAGRADSQATVTQDLDAFKKNEEIKHYNDGFVCVPQEDTVGVLKPENHPEIFRKKADFEDQKTDIQQNENRQMEFEQNENRRLESTHNENKQVETKYESKQTELKQNENRQTESKQNESRQMEMKQNEGKQNNGKQEIRQRPETPKQKSEGRPETPKHRHDNRRDSSKPLSDKKIEIPRHKPDVKSDPSGIKSESRSDPAKQRPDGHSVSDTLRRDHDSFKQRYEDRGESERYRGDPSKIRRPEYLRSSNKNEYDSKHGIKPDGSKTEKFERKHRHESGESRERFSSGDQKSRPDSPRIKQEGRGDFSKSRPEKTGFKSPNSKDERRTDGNKSKLDSNKAHAENKAEFPSYLLGARSGALKHFVIPKIKRDKDGNVTQESRKTEYKGEQKDKVEKIGLAEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYTEISSDEDNDSEEAFESSRKRHKKNRDEAWEYEEHDRRSSGDHRRSGHYHEGRRTSGSGRYRNRSPDDSDMDDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASMENILENLEDMDFTAFGDDDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTEKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEELNKKVDQDVLITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGPIARILKQVSGGEDEIQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTGKIMHRAESRKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACIQLVDNLVEHIIKYEESLSDSDNKGVNSGRLVACITTLYLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAIVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPNSTILTANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADREWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLSQGLIHP…
SIO_010081: LOC118155637
subclass of: SO_0000673
so part of: LOC118155637
location: join(287264..287318,288765..289394,305582..307069,315896..316078,318384..318581,318767..318838,318926..319015,320014..320117,321584..321670,323322..323553,324994..325145,325541..325621,328639..328739,330049..330187,330396..330478,331534..331666,333098..333241,336956..337045,337292..337506,337602..337704,339883..339981,340080..340226,341379..341513,342970..343068,344198..344251,346593..346701,347307..347443,350164..350304,350625..350718,350829..350983,351245..351335,355199..355372,355915..356105,356764..356871,358219..358419,358819..358965,360445..360740,361063..361237,361547..361732,362288..362653)
location: region:287264-362653:1
so has part: feature:287264-287318:1:exon
so has part: feature:288765-289394:1:exon
so has part: feature:305582-307069:1:exon
so has part: feature:315896-316078:1:exon
so has part: feature:318384-318581:1:exon
so has part: feature:318767-318838:1:exon
so has part: feature:318926-319015:1:exon
so has part: feature:320014-320117:1:exon
so has part: feature:321584-321670:1:exon
so has part: feature:323322-323553:1:exon
so has part: feature:324994-325145:1:exon
so has part: feature:325541-325621:1:exon
so has part: feature:328639-328739:1:exon
so has part: feature:330049-330187:1:exon
so has part: feature:330396-330478:1:exon
so has part: feature:331534-331666:1:exon
so has part: feature:333098-333241:1:exon
so has part: feature:336956-337045:1:exon
so has part: feature:337292-337506:1:exon
so has part: feature:337602-337704:1:exon
so has part: feature:339883-339981:1:exon
so has part: feature:340080-340226:1:exon
so has part: feature:341379-341513:1:exon
so has part: feature:342970-343068:1:exon
so has part: feature:344198-344251:1:exon
so has part: feature:346593-346701:1:exon
so has part: feature:347307-347443:1:exon
so has part: feature:350164-350304:1:exon
so has part: feature:350625-350718:1:exon
so has part: feature:350829-350983:1:exon
so has part: feature:351245-351335:1:exon
so has part: feature:355199-355372:1:exon
so has part: feature:355915-356105:1:exon
so has part: feature:356764-356871:1:exon
so has part: feature:358219-358419:1:exon
so has part: feature:358819-358965:1:exon
so has part: feature:360445-360740:1:exon
so has part: feature:361063-361237:1:exon
so has part: feature:361547-361732:1:exon
so has part: feature:362288-362653:1:exon

XP_035164913.1
type: Protein
SIO_000068: ncbiprotein

position:362653:1
position: 362653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287264-287318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288765-289394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305582-307069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315896-316078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318384-318581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318767-318838:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318926-319015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320014-320117:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321584-321670:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:323322-323553:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:324994-325145:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:325541-325621:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:328639-328739:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:330049-330187:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:330396-330478:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:331534-331666:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:333098-333241:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:336956-337045:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:337292-337506:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:337602-337704:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:339883-339981:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:340080-340226:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341379-341513:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:342970-343068:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344198-344251:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:346593-346701:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:347307-347443:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:350164-350304:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:350625-350718:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:350829-350983:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:351245-351335:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:355199-355372:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:355915-356105:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:356764-356871:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:358219-358419:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:358819-358965:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:360445-360740:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:361063-361237:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:361547-361732:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:362288-362653:1:exon

LOC118155638
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 412807..413435
location: region:412807-413435:1
so has part: feature:412807-413435:1:exon

118155638
type: Gene
SIO_000068: ncbigene

position:412807:1
position: 412807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413435:1
position: 413435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412807-413435:1:exon

LOC118155638
type: Exon
subclass of: SO_0000147
RO_0002162: 8884
gene: LOC118155638
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC118155638
subclass of: SO_0000673
so part of: LOC118155638
location: 412807..413435
location: region:412807-413435:1
so has part: feature:412807-413435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412807-413435:1:exon

LOC118155648
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 496964..499751
location: region:496964-499751:1
so has part: feature:496964-499751:1:exon
subclass of: SO_0000011

118155648
type: Gene
SIO_000068: ncbigene

position:496964:1
position: 496964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499751:1
position: 499751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496964-499751:1:exon

LOC118155648
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118155648
product: uncharacterized LOC118155648
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004745929.1
SIO_010081: LOC118155648
subclass of: SO_0000673
so part of: LOC118155648
location: join(496964..497091,499704..499705,499741..499751)
location: region:496964-499751:1
so has part: feature:496964-497091:1:exon
so has part: feature:499704-499705:1:exon
so has part: feature:499741-499751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496964-497091:1:exon

position:497091:1
position: 497091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499704-499705:1:exon

position:499704:1
position: 499704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499705:1
position: 499705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:499741-499751:1:exon

position:499741:1
position: 499741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155644
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(554221..614758)
location: region:554221-614758:-1
so has part: feature:554221-614758:-1:exon
subclass of: SO_0000010

118155644
type: Gene
SIO_000068: ncbigene

position:554221:-1
position: 554221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614758:-1
position: 614758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554221-614758:-1:exon

LOC118155644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155644
product: polycomb group RING finger protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035309031.1
SIO_010081: LOC118155644
subclass of: SO_0000673
so part of: LOC118155644
location: complement(join(554221..554351,574027..574109,575080..575190,581435..581490,593707..593803,597363..597480,614328..614370,614623..614758))
location: region:554221-614758:-1
so has part: feature:614623-614758:-1:exon
so has part: feature:614328-614370:-1:exon
so has part: feature:597363-597480:-1:exon
so has part: feature:593707-593803:-1:exon
so has part: feature:581435-581490:-1:exon
so has part: feature:575080-575190:-1:exon
so has part: feature:574027-574109:-1:exon
so has part: feature:554221-554351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614623-614758:-1:exon

position:614623:-1
position: 614623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614328-614370:-1:exon

position:614328:-1
position: 614328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614370:-1
position: 614370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:597363-597480:-1:exon

position:597363:-1
position: 597363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597480:-1
position: 597480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593707-593803:-1:exon

position:593707:-1
position: 593707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593803:-1
position: 593803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:581435-581490:-1:exon

position:581435:-1
position: 581435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581490:-1
position: 581490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575080-575190:-1:exon

position:575080:-1
position: 575080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575190:-1
position: 575190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574027-574109:-1:exon

position:574027:-1
position: 574027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574109:-1
position: 574109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:554221-554351:-1:exon

position:554351:-1
position: 554351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118155644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155644
product: polycomb group RING finger protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035309030.1
SIO_010081: LOC118155644
subclass of: SO_0000673
so part of: LOC118155644
location: complement(join(554221..554351,574027..574109,575080..575190,581435..581490,593707..593803,597363..597480,597763..597874,614328..614361))
location: region:554221-614361:-1
so has part: feature:614328-614361:-1:exon
so has part: feature:597763-597874:-1:exon
so has part: feature:597363-597480:-1:exon
so has part: feature:593707-593803:-1:exon
so has part: feature:581435-581490:-1:exon
so has part: feature:575080-575190:-1:exon
so has part: feature:574027-574109:-1:exon
so has part: feature:554221-554351:-1:exon

position:614361:-1
position: 614361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614328-614361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597763-597874:-1:exon

position:597763:-1
position: 597763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597874:-1
position: 597874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:597363-597480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593707-593803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:581435-581490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575080-575190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574027-574109:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554221-554351:-1:exon

LOC118155644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 3-like isoform X1
translation: MSSCVGVWLLVKTNPPHLIPKMMTRKIKLWDINAHITCHLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMKKQKEFYHKLGMEVPGDIKGETCSSKQHLDSYRNGETKTDENSNKETSEEKEDNDYHRSDEQALLCMPSFLWGSLVVFFDEVPFYPYMVMCPR
SIO_010081: LOC118155644
subclass of: SO_0000673
so part of: LOC118155644
location: complement(join(554256..554351,574027..574109,575080..575190,581435..581490,593707..593803,597363..597480,597763..597816))
location: region:554256-597816:-1
so has part: feature:597763-597816:-1:exon
so has part: feature:597363-597480:-1:exon
so has part: feature:593707-593803:-1:exon
so has part: feature:581435-581490:-1:exon
so has part: feature:575080-575190:-1:exon
so has part: feature:574027-574109:-1:exon
so has part: feature:554256-554351:-1:exon

XP_035164921.1
type: Protein
SIO_000068: ncbiprotein

position:554256:-1
position: 554256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597816:-1
position: 597816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597763-597816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597363-597480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:593707-593803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581435-581490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575080-575190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574027-574109:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554256-554351:-1:exon

LOC118155644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 3-like isoform X2
translation: MMTRKIKLWDINAHITCHLCNGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMKKQKEFYHKLGMEVPGDIKGETCSSKQHLDSYRNGETKTDENSNKETSEEKEDNDYHRSDEQALLCMPSFLWGSLVVFFDEVPFYPYMVMCPR
SIO_010081: LOC118155644
subclass of: SO_0000673
so part of: LOC118155644
location: complement(join(554256..554351,574027..574109,575080..575190,581435..581490,593707..593803,597363..597471))
location: region:554256-597471:-1
so has part: feature:597363-597471:-1:exon
so has part: feature:593707-593803:-1:exon
so has part: feature:581435-581490:-1:exon
so has part: feature:575080-575190:-1:exon
so has part: feature:574027-574109:-1:exon
so has part: feature:554256-554351:-1:exon

XP_035164922.1
type: Protein
SIO_000068: ncbiprotein

position:597471:-1
position: 597471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597363-597471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593707-593803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581435-581490:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575080-575190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574027-574109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554256-554351:-1:exon

LOC118155641
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(620389..666231)
location: region:620389-666231:-1
so has part: feature:620389-666231:-1:exon
subclass of: SO_0000010

118155641
type: Gene
SIO_000068: ncbigene

position:620389:-1
position: 620389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666231:-1
position: 666231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620389-666231:-1:exon

LOC118155641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155641
product: zinc finger RNA-binding protein-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035309027.1
SIO_010081: LOC118155641
subclass of: SO_0000673
so part of: LOC118155641
location: complement(join(620389..622287,622972..623069,623180..623291,626763..626858,627681..627778,632533..632674,634157..634307,634562..634767,638909..639071,639439..639584,640545..640664,641211..641404,643792..644092,645760..645951,646976..647220,649161..649379,650154..650289,656501..656783,666133..666231))
location: region:620389-666231:-1
so has part: feature:666133-666231:-1:exon
so has part: feature:656501-656783:-1:exon
so has part: feature:650154-650289:-1:exon
so has part: feature:649161-649379:-1:exon
so has part: feature:646976-647220:-1:exon
so has part: feature:645760-645951:-1:exon
so has part: feature:643792-644092:-1:exon
so has part: feature:641211-641404:-1:exon
so has part: feature:640545-640664:-1:exon
so has part: feature:639439-639584:-1:exon
so has part: feature:638909-639071:-1:exon
so has part: feature:634562-634767:-1:exon
so has part: feature:634157-634307:-1:exon
so has part: feature:632533-632674:-1:exon
so has part: feature:627681-627778:-1:exon
so has part: feature:626763-626858:-1:exon
so has part: feature:623180-623291:-1:exon
so has part: feature:622972-623069:-1:exon
so has part: feature:620389-622287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666133-666231:-1:exon

position:666133:-1
position: 666133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656501-656783:-1:exon

position:656501:-1
position: 656501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656783:-1
position: 656783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:650154-650289:-1:exon

position:650154:-1
position: 650154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650289:-1
position: 650289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:649161-649379:-1:exon

position:649161:-1
position: 649161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649379:-1
position: 649379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:646976-647220:-1:exon

position:646976:-1
position: 646976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647220:-1
position: 647220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:645760-645951:-1:exon

position:645760:-1
position: 645760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645951:-1
position: 645951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:643792-644092:-1:exon

position:643792:-1
position: 643792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644092:-1
position: 644092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:641211-641404:-1:exon

position:641211:-1
position: 641211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641404:-1
position: 641404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:640545-640664:-1:exon

position:640545:-1
position: 640545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640664:-1
position: 640664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:639439-639584:-1:exon

position:639439:-1
position: 639439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639584:-1
position: 639584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:638909-639071:-1:exon

position:638909:-1
position: 638909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639071:-1
position: 639071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:634562-634767:-1:exon

position:634562:-1
position: 634562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634767:-1
position: 634767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:634157-634307:-1:exon

position:634157:-1
position: 634157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634307:-1
position: 634307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:632533-632674:-1:exon

position:632533:-1
position: 632533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632674:-1
position: 632674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:627681-627778:-1:exon

position:627681:-1
position: 627681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627778:-1
position: 627778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:626763-626858:-1:exon

position:626763:-1
position: 626763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626858:-1
position: 626858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:623180-623291:-1:exon

position:623180:-1
position: 623180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623291:-1
position: 623291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:622972-623069:-1:exon

position:622972:-1
position: 622972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623069:-1
position: 623069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:620389-622287:-1:exon

position:622287:-1
position: 622287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118155641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155641
product: zinc finger RNA-binding protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_035309026.1
SIO_010081: LOC118155641
subclass of: SO_0000673
so part of: LOC118155641
location: complement(join(620389..622287,622972..623069,623180..623291,626763..626858,627681..627778,632533..632674,634157..634307,634562..634767,638909..639071,639439..639584,640545..640664,641211..641404,643804..644092,645760..645951,646976..647220,649161..649379,650154..650289,656501..656783,665840..665924,666133..666222))
location: region:620389-666222:-1
so has part: feature:666133-666222:-1:exon
so has part: feature:665840-665924:-1:exon
so has part: feature:656501-656783:-1:exon
so has part: feature:650154-650289:-1:exon
so has part: feature:649161-649379:-1:exon
so has part: feature:646976-647220:-1:exon
so has part: feature:645760-645951:-1:exon
so has part: feature:643804-644092:-1:exon
so has part: feature:641211-641404:-1:exon
so has part: feature:640545-640664:-1:exon
so has part: feature:639439-639584:-1:exon
so has part: feature:638909-639071:-1:exon
so has part: feature:634562-634767:-1:exon
so has part: feature:634157-634307:-1:exon
so has part: feature:632533-632674:-1:exon
so has part: feature:627681-627778:-1:exon
so has part: feature:626763-626858:-1:exon
so has part: feature:623180-623291:-1:exon
so has part: feature:622972-623069:-1:exon
so has part: feature:620389-622287:-1:exon

position:666222:-1
position: 666222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666133-666222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665840-665924:-1:exon

position:665840:-1
position: 665840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665924:-1
position: 665924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656501-656783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650154-650289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649161-649379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646976-647220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645760-645951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643804-644092:-1:exon

position:643804:-1
position: 643804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:641211-641404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640545-640664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:639439-639584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638909-639071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634562-634767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:634157-634307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632533-632674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:627681-627778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626763-626858:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:623180-623291:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:622972-623069:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:620389-622287:-1:exon

LOC118155641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155641
product: zinc finger RNA-binding protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_035309025.1
SIO_010081: LOC118155641
subclass of: SO_0000673
so part of: LOC118155641
location: complement(join(620389..622287,622972..623069,623180..623291,626763..626858,627681..627778,632533..632674,634157..634307,634562..634767,638909..639071,639439..639584,640545..640664,641211..641404,643792..644092,645760..645951,646976..647220,649161..649379,650154..650289,656501..656783,665840..665924,666133..666222))
location: region:620389-666222:-1
so has part: feature:666133-666222:-1:exon
so has part: feature:665840-665924:-1:exon
so has part: feature:656501-656783:-1:exon
so has part: feature:650154-650289:-1:exon
so has part: feature:649161-649379:-1:exon
so has part: feature:646976-647220:-1:exon
so has part: feature:645760-645951:-1:exon
so has part: feature:643792-644092:-1:exon
so has part: feature:641211-641404:-1:exon
so has part: feature:640545-640664:-1:exon
so has part: feature:639439-639584:-1:exon
so has part: feature:638909-639071:-1:exon
so has part: feature:634562-634767:-1:exon
so has part: feature:634157-634307:-1:exon
so has part: feature:632533-632674:-1:exon
so has part: feature:627681-627778:-1:exon
so has part: feature:626763-626858:-1:exon
so has part: feature:623180-623291:-1:exon
so has part: feature:622972-623069:-1:exon
so has part: feature:620389-622287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666133-666222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665840-665924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656501-656783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650154-650289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649161-649379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646976-647220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645760-645951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643792-644092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641211-641404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640545-640664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:639439-639584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638909-639071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634562-634767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:634157-634307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632533-632674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:627681-627778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626763-626858:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:623180-623291:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:622972-623069:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:620389-622287:-1:exon

LOC118155641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger RNA-binding protein-like isoform X2
translation: MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAVAAAQPQPSVAESYYQTAQKAGYSQGAAQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQVAAAAAAAAATAAWTGTTFTKKTPFQNKQLKTKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNANNSSTSARGSQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVTLATSSTSTSASKPAASASNISTSNSTVNSSIASSAVKILTPMASTPLNTMSNNKTSSTAANIAVKKTSTPKINFVGGNKLQTTGNKLEETKSAESVKTTLVATVQTQEVKPDTATEPVTPATLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGIPPQPQGPAPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEKNKSKEGDDKKDGSKDRALKGVLRVGVLAKGLLLRGDRSVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIKCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQINQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
SIO_010081: LOC118155641
subclass of: SO_0000673
so part of: LOC118155641
location: complement(join(622108..622287,622972..623069,623180..623291,626763..626858,627681..627778,632533..632674,634157..634307,634562..634767,638909..639071,639439..639584,640545..640664,641211..641404,643804..644092,645760..645951,646976..647220,649161..649379,650154..650289,656501..656783,665840..665924,666133..666169))
location: region:622108-666169:-1
so has part: feature:666133-666169:-1:exon
so has part: feature:665840-665924:-1:exon
so has part: feature:656501-656783:-1:exon
so has part: feature:650154-650289:-1:exon
so has part: feature:649161-649379:-1:exon
so has part: feature:646976-647220:-1:exon
so has part: feature:645760-645951:-1:exon
so has part: feature:643804-644092:-1:exon
so has part: feature:641211-641404:-1:exon
so has part: feature:640545-640664:-1:exon
so has part: feature:639439-639584:-1:exon
so has part: feature:638909-639071:-1:exon
so has part: feature:634562-634767:-1:exon
so has part: feature:634157-634307:-1:exon
so has part: feature:632533-632674:-1:exon
so has part: feature:627681-627778:-1:exon
so has part: feature:626763-626858:-1:exon
so has part: feature:623180-623291:-1:exon
so has part: feature:622972-623069:-1:exon
so has part: feature:622108-622287:-1:exon

XP_035164917.1
type: Protein
SIO_000068: ncbiprotein

position:622108:-1
position: 622108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666169:-1
position: 666169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666133-666169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665840-665924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656501-656783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650154-650289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649161-649379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646976-647220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645760-645951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643804-644092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641211-641404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640545-640664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:639439-639584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638909-639071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634562-634767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:634157-634307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632533-632674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:627681-627778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626763-626858:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:623180-623291:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:622972-623069:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:622108-622287:-1:exon

LOC118155641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger RNA-binding protein-like isoform X1
translation: MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAVAAAQPQPSVAESYYQTAQKAGYSQGAAQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQVAAAAAAAAATAAWTGTTFTKKTPFQNKQLKTKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNANNSSTSARGSQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVTLATSSTSTSASKPAASASNISTSNSTVNSSIASSAVKILTPMASTPLNTMSNNKTSSTAANIAVKKTSTPKINFVGKYRSGNKLQTTGNKLEETKSAESVKTTLVATVQTQEVKPDTATEPVTPATLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGIPPQPQGPAPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEKNKSKEGDDKKDGSKDRALKGVLRVGVLAKGLLLRGDRSVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIKCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQINQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
SIO_010081: LOC118155641
subclass of: SO_0000673
so part of: LOC118155641
location: complement(join(622108..622287,622972..623069,623180..623291,626763..626858,627681..627778,632533..632674,634157..634307,634562..634767,638909..639071,639439..639584,640545..640664,641211..641404,643792..644092,645760..645951,646976..647220,649161..649379,650154..650289,656501..656783,665840..665924,666133..666169))
location: region:622108-666169:-1
so has part: feature:666133-666169:-1:exon
so has part: feature:665840-665924:-1:exon
so has part: feature:656501-656783:-1:exon
so has part: feature:650154-650289:-1:exon
so has part: feature:649161-649379:-1:exon
so has part: feature:646976-647220:-1:exon
so has part: feature:645760-645951:-1:exon
so has part: feature:643792-644092:-1:exon
so has part: feature:641211-641404:-1:exon
so has part: feature:640545-640664:-1:exon
so has part: feature:639439-639584:-1:exon
so has part: feature:638909-639071:-1:exon
so has part: feature:634562-634767:-1:exon
so has part: feature:634157-634307:-1:exon
so has part: feature:632533-632674:-1:exon
so has part: feature:627681-627778:-1:exon
so has part: feature:626763-626858:-1:exon
so has part: feature:623180-623291:-1:exon
so has part: feature:622972-623069:-1:exon
so has part: feature:622108-622287:-1:exon

XP_035164916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666133-666169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665840-665924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656501-656783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650154-650289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649161-649379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646976-647220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645760-645951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643792-644092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641211-641404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640545-640664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:639439-639584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638909-639071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634562-634767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:634157-634307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632533-632674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:627681-627778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:626763-626858:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:623180-623291:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:622972-623069:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:622108-622287:-1:exon

LOC118155641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger RNA-binding protein-like isoform X3
translation: MPGSFVHLCQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAVAAAQPQPSVAESYYQTAQKAGYSQGAAQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQVAAAAAAAAATAAWTGTTFTKKTPFQNKQLKTKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNANNSSTSARGSQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVTLATSSTSTSASKPAASASNISTSNSTVNSSIASSAVKILTPMASTPLNTMSNNKTSSTAANIAVKKTSTPKINFVGKYRSGNKLQTTGNKLEETKSAESVKTTLVATVQTQEVKPDTATEPVTPATLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGIPPQPQGPAPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEKNKSKEGDDKKDGSKDRALKGVLRVGVLAKGLLLRGDRSVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIKCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQINQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
SIO_010081: LOC118155641
subclass of: SO_0000673
so part of: LOC118155641
location: complement(join(622108..622287,622972..623069,623180..623291,626763..626858,627681..627778,632533..632674,634157..634307,634562..634767,638909..639071,639439..639584,640545..640664,641211..641404,643792..644092,645760..645951,646976..647220,649161..649379,650154..650289,656501..656783,666133..666158))
location: region:622108-666158:-1
so has part: feature:666133-666158:-1:exon
so has part: feature:656501-656783:-1:exon
so has part: feature:650154-650289:-1:exon
so has part: feature:649161-649379:-1:exon
so has part: feature:646976-647220:-1:exon
so has part: feature:645760-645951:-1:exon
so has part: feature:643792-644092:-1:exon
so has part: feature:641211-641404:-1:exon
so has part: feature:640545-640664:-1:exon
so has part: feature:639439-639584:-1:exon
so has part: feature:638909-639071:-1:exon
so has part: feature:634562-634767:-1:exon
so has part: feature:634157-634307:-1:exon
so has part: feature:632533-632674:-1:exon
so has part: feature:627681-627778:-1:exon
so has part: feature:626763-626858:-1:exon
so has part: feature:623180-623291:-1:exon
so has part: feature:622972-623069:-1:exon
so has part: feature:622108-622287:-1:exon

XP_035164918.1
type: Protein
SIO_000068: ncbiprotein

position:666158:-1
position: 666158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666133-666158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656501-656783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:650154-650289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649161-649379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646976-647220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645760-645951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643792-644092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:641211-641404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:640545-640664:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:639439-639584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:638909-639071:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634562-634767:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634157-634307:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632533-632674:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:627681-627778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626763-626858:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:623180-623291:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:622972-623069:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:622108-622287:-1:exon

LOC118155641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155641
product: zinc finger RNA-binding protein-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035309028.1
SIO_010081: LOC118155641
subclass of: SO_0000673
so part of: LOC118155641
location: complement(join(626763..626858,632533..632674,634157..634307,634562..634767,638909..639071,639439..639584,640545..640664,641211..641404,643792..644092,645760..645951,646976..647220,649161..649379,650154..650289,656501..656783,665840..665924,666133..666222))
location: region:626763-666222:-1
so has part: feature:666133-666222:-1:exon
so has part: feature:665840-665924:-1:exon
so has part: feature:656501-656783:-1:exon
so has part: feature:650154-650289:-1:exon
so has part: feature:649161-649379:-1:exon
so has part: feature:646976-647220:-1:exon
so has part: feature:645760-645951:-1:exon
so has part: feature:643792-644092:-1:exon
so has part: feature:641211-641404:-1:exon
so has part: feature:640545-640664:-1:exon
so has part: feature:639439-639584:-1:exon
so has part: feature:638909-639071:-1:exon
so has part: feature:634562-634767:-1:exon
so has part: feature:634157-634307:-1:exon
so has part: feature:632533-632674:-1:exon
so has part: feature:626763-626858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666133-666222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665840-665924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656501-656783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650154-650289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649161-649379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646976-647220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645760-645951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643792-644092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641211-641404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640545-640664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:639439-639584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638909-639071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634562-634767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:634157-634307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632533-632674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626763-626858:-1:exon

LOC118155641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger RNA-binding protein-like isoform X4
translation: MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAVAAAQPQPSVAESYYQTAQKAGYSQGAAQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQVAAAAAAAAATAAWTGTTFTKKTPFQNKQLKTKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNANNSSTSARGSQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVTLATSSTSTSASKPAASASNISTSNSTVNSSIASSAVKILTPMASTPLNTMSNNKTSSTAANIAVKKTSTPKINFVGKYRSGNKLQTTGNKLEETKSAESVKTTLVATVQTQEVKPDTATEPVTPATLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGIPPQPQGPAPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEKNKSKEGDDKKDGSKDRALKGVLRVGVLAKGLLLRGDRSVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIKCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGG
SIO_010081: LOC118155641
subclass of: SO_0000673
so part of: LOC118155641
location: complement(join(626854..626858,632533..632674,634157..634307,634562..634767,638909..639071,639439..639584,640545..640664,641211..641404,643792..644092,645760..645951,646976..647220,649161..649379,650154..650289,656501..656783,665840..665924,666133..666169))
location: region:626854-666169:-1
so has part: feature:666133-666169:-1:exon
so has part: feature:665840-665924:-1:exon
so has part: feature:656501-656783:-1:exon
so has part: feature:650154-650289:-1:exon
so has part: feature:649161-649379:-1:exon
so has part: feature:646976-647220:-1:exon
so has part: feature:645760-645951:-1:exon
so has part: feature:643792-644092:-1:exon
so has part: feature:641211-641404:-1:exon
so has part: feature:640545-640664:-1:exon
so has part: feature:639439-639584:-1:exon
so has part: feature:638909-639071:-1:exon
so has part: feature:634562-634767:-1:exon
so has part: feature:634157-634307:-1:exon
so has part: feature:632533-632674:-1:exon
so has part: feature:626854-626858:-1:exon

XP_035164919.1
type: Protein
SIO_000068: ncbiprotein

position:626854:-1
position: 626854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666133-666169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665840-665924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656501-656783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650154-650289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649161-649379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646976-647220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645760-645951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643792-644092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641211-641404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640545-640664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:639439-639584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638909-639071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634562-634767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:634157-634307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632533-632674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626854-626858:-1:exon

LOC118155652
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155652
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(659032..659164)
location: region:659032-659164:-1
so has part: feature:659032-659164:-1:exon
subclass of: SO_0000578

118155652
type: Gene
SIO_000068: ncbigene

position:659032:-1
position: 659032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659164:-1
position: 659164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659032-659164:-1:exon

LOC118155652
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: snoRNA
gene: LOC118155652
product: small nucleolar RNA SNORA66
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00155
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004745931.1
SIO_010081: LOC118155652
subclass of: SO_0000673
so part of: LOC118155652
location: complement(659032..659164)
location: region:659032-659164:-1
so has part: feature:659032-659164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659032-659164:-1:exon

LOC118155649
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 685489..694712
location: region:685489-694712:1
so has part: feature:685489-694712:1:exon
subclass of: SO_0000011

118155649
type: Gene
SIO_000068: ncbigene

position:685489:1
position: 685489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694712:1
position: 694712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685489-694712:1:exon

LOC118155649
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118155649
product: uncharacterized LOC118155649
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004745930.1
SIO_010081: LOC118155649
subclass of: SO_0000673
so part of: LOC118155649
location: join(685489..685555,694097..694101,694691..694712)
location: region:685489-694712:1
so has part: feature:685489-685555:1:exon
so has part: feature:694097-694101:1:exon
so has part: feature:694691-694712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685489-685555:1:exon

position:685555:1
position: 685555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694097-694101:1:exon

position:694097:1
position: 694097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694101:1
position: 694101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:694691-694712:1:exon

position:694691:1
position: 694691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155640
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740552..791760
location: region:740552-791760:1
so has part: feature:740552-791760:1:exon
subclass of: SO_0000010

118155640
type: Gene
SIO_000068: ncbigene

position:740552:1
position: 740552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791760:1
position: 791760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740552-791760:1:exon

LOC118155640
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155640
product: spindlin-Z-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035309024.1
SIO_010081: LOC118155640
subclass of: SO_0000673
so part of: LOC118155640
location: join(740552..741197,761417..761641,783734..784072,784732..784965,787920..791760)
location: region:740552-791760:1
so has part: feature:740552-741197:1:exon
so has part: feature:761417-761641:1:exon
so has part: feature:783734-784072:1:exon
so has part: feature:784732-784965:1:exon
so has part: feature:787920-791760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740552-741197:1:exon

position:741197:1
position: 741197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761417-761641:1:exon

position:761417:1
position: 761417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761641:1
position: 761641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783734-784072:1:exon

position:783734:1
position: 783734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784072:1
position: 784072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:784732-784965:1:exon

position:784732:1
position: 784732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784965:1
position: 784965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:787920-791760:1:exon

position:787920:1
position: 787920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155639
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 741006..747880
location: region:741006-747880:1
so has part: feature:741006-747880:1:exon
subclass of: SO_0000010

118155639
type: Gene
SIO_000068: ncbigene

position:741006:1
position: 741006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747880:1
position: 747880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741006-747880:1:exon

LOC118155639
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155639
product: uncharacterized LOC118155639
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035309023.1
SIO_010081: LOC118155639
subclass of: SO_0000673
so part of: LOC118155639
location: join(741006..741083,741326..742235,746422..746485,747435..747880)
location: region:741006-747880:1
so has part: feature:741006-741083:1:exon
so has part: feature:741326-742235:1:exon
so has part: feature:746422-746485:1:exon
so has part: feature:747435-747880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741006-741083:1:exon

position:741083:1
position: 741083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741326-742235:1:exon

position:741326:1
position: 741326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742235:1
position: 742235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746422-746485:1:exon

position:746422:1
position: 746422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746485:1
position: 746485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747435-747880:1:exon

position:747435:1
position: 747435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155639
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118155639
translation: MWQRQAGGSNADGGGGQSRRGEQLFPLSLPEADVIYILAVFRLRYPSFFAARVGGSPGNRGKRARVGLRGSRAYVAVSLLSSPLAPRLLSNPRPSGLRRDCCPPLARCLCIHPHPLPEGKDLGCVFLSPLLSTELLYCGLGPTEGLSASLSIAHVGGGRHASALPPFPSRKNRAKGVRGWRWGSAASQQLEGVAGKVAAVLTRWAGCPGTARTATWDTQGVCVRARSAWALLDSFVCCCRCFLPLLSFPSLPDSKRCCRFVDTGPTLTTWLTLCPGSPLGSPPSLSLPLSLSSIEGFVSSPSSAVKKKKKKKKRKNNAPSLLCAWWDFKDKFPRKYHYKRCY
SIO_010081: LOC118155639
subclass of: SO_0000673
so part of: LOC118155639
location: join(741006..741083,741326..742235,746422..746462)
location: region:741006-746462:1
so has part: feature:741006-741083:1:exon
so has part: feature:741326-742235:1:exon
so has part: feature:746422-746462:1:exon

XP_035164914.1
type: Protein
SIO_000068: ncbiprotein

position:746462:1
position: 746462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741006-741083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741326-742235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746422-746462:1:exon

LOC118155640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindlin-Z-like
translation: MKTPFGKSPGQRSRADADYLLKAYSSCQSRFLSMYLFNTMFVSVYRKHRNNVGPSKPISQPRRNIVGCRIQHGWKEGSGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHKDERVSALEVLPDRVASSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAPIMNTWFYITYEKDPVLYMYQLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS
SIO_010081: LOC118155640
subclass of: SO_0000673
so part of: LOC118155640
location: join(761590..761641,783734..784072,784732..784965,787920..788119)
location: region:761590-788119:1
so has part: feature:761590-761641:1:exon
so has part: feature:783734-784072:1:exon
so has part: feature:784732-784965:1:exon
so has part: feature:787920-788119:1:exon

XP_035164915.1
type: Protein
SIO_000068: ncbiprotein

position:761590:1
position: 761590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788119:1
position: 788119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761590-761641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783734-784072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784732-784965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:787920-788119:1:exon

LOC118155651
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 809731..813730
location: region:809731-813730:1
so has part: feature:809731-813730:1:exon
subclass of: SO_0000010

118155651
type: Gene
SIO_000068: ncbigene

position:809731:1
position: 809731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813730:1
position: 813730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809731-813730:1:exon

LOC118155651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155651
product: E3 ubiquitin-protein ligase KCMF1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_035309036.1
SIO_010081: LOC118155651
subclass of: SO_0000673
so part of: LOC118155651
location: join(809731..810468,812322..813730)
location: region:809731-813730:1
so has part: feature:809731-810468:1:exon
so has part: feature:812322-813730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809731-810468:1:exon

position:810468:1
position: 810468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:812322-813730:1:exon

position:812322:1
position: 812322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase KCMF1-like
translation: MQLQLERQHAQAARQQLETARNATRRTNTSSIPTTLTQSVAATNTSNTENIQQTIQNSQFLLTRLNDPKMSEAERQSKESERADHSLFVQELLLSTLMQEDSSSSDEDERGEIADFGAMGCVDIMPLDVALENLNLKDNNKGNEPLPPPL
SIO_010081: LOC118155651
subclass of: SO_0000673
so part of: LOC118155651
location: join(810278..810468,812322..812583)
location: region:810278-812583:1
so has part: feature:810278-810468:1:exon
so has part: feature:812322-812583:1:exon

XP_035164927.1
type: Protein
SIO_000068: ncbiprotein

position:810278:1
position: 810278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812583:1
position: 812583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810278-810468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:812322-812583:1:exon