Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 28, BPBGC_Ojam_1.0, whole genome shotgun sequence.
type: Entry
definition: Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 28, BPBGC_Ojam_1.0, whole genome shotgun sequence.
sequence version: NC_048920.1
sequence date: 2020-07-05
sequence: sequence
division: CON
label: NC_048920.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA641662
dblink: SAMN13257492
keyword: WGS
keyword: RefSeq
source: Oxyura jamaicensis (ruddy duck)
organism: Oxyura jamaicensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021826.1.\nAssembly name: BPBGC_Ojam_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2020/03/10. The original whole-genome shotgun project\nhas the accession JAACYN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Date :: 01-SEP-2019\nAssembly Method :: Supernova 2 v. SEPT-2019\nAssembly Name :: BPBGC_Ojam_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Oxyura jamaicensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5735600
topology: linear
so has quality: SO_0000987
location: 1..5735600
location: region:1-5735600:1
RO_0002162: 8884

NC_048920
type: RefSeq
SIO_000068: refseq

PRJNA641662
type: BioProject
SIO_000068: bioproject

SAMN13257492
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5735600:1
position: 5735600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5735600:1:source
so part of: sequence
organism: Oxyura jamaicensis
mol type: genomic DNA
isolate: SHBP4307
chromosome: 28
sex: female
tissue type: blood
dev stage: adult
country: USA: Scotland Neck, NC
breed: ruddy duck

8884
type: Taxonomy
SIO_000068: taxonomy

LOC118179088
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3373..19485)
location: region:3373-19485:-1
so has part: feature:3373-19485:-1:exon
subclass of: SO_0000010

118179088
type: Gene
SIO_000068: ncbigene

position:3373:-1
position: 3373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19485:-1
position: 19485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3373-19485:-1:exon

LOC118179088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179088
product: scaffold attachment factor B1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_035348144.1
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3373..3768,3984..4050,4245..4357,5071..5192,6013..6049,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19485))
location: region:3373-19485:-1
so has part: feature:19021-19485:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6049:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:4245-4357:-1:exon
so has part: feature:3984-4050:-1:exon
so has part: feature:3373-3768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19485:-1:exon

position:19021:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

position:18018:-1
position: 18018
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

position:16932:-1
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position:16996:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

position:16568:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:15402-15473:-1:exon

position:15402:-1
position: 15402
reference: sequence
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position:15473:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

position:14727:-1
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reference: sequence
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position:14754:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

position:13300:-1
position: 13300
reference: sequence
type: ReverseStrandPosition
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position:13798:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

position:12833:-1
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SIO_000628: feature:12028-12128:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

position:11042:-1
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urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

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SIO_000300: 14
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SIO_000300: 15
SIO_000628: feature:7794-8087:-1:exon

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SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:6013-6049:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

position:5071:-1
position: 5071
reference: sequence
type: ReverseStrandPosition
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position:5192:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4245-4357:-1:exon

position:4245:-1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:3984-4050:-1:exon

position:3984:-1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:3373-3768:-1:exon

position:3768:-1
position: 3768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118179088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179088
product: scaffold attachment factor B1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_035348147.1
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3373..3768,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19485))
location: region:3373-19485:-1
so has part: feature:19021-19485:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:3373-3768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19485:-1:exon

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SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

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SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

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SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

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SIO_000300: 5
SIO_000628: feature:15402-15473:-1:exon

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SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

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SIO_000628: feature:9194-9282:-1:exon

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SIO_000628: feature:8521-8657:-1:exon

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SIO_000628: feature:7794-8087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6830-6967:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013-6052:-1:exon

position:6052:-1
position: 6052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3373-3768:-1:exon

LOC118179088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179088
product: scaffold attachment factor B1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_035348146.1
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3373..3768,4245..4357,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19485))
location: region:3373-19485:-1
so has part: feature:19021-19485:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:4245-4357:-1:exon
so has part: feature:3373-3768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19485:-1:exon

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SIO_000628: feature:18018-18105:-1:exon

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SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

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SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

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SIO_000300: 5
SIO_000628: feature:15402-15473:-1:exon

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SIO_000628: feature:14727-14754:-1:exon

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SIO_000628: feature:13300-13798:-1:exon

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SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

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SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

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SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

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SIO_000628: feature:11042-11142:-1:exon

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SIO_000628: feature:10019-10158:-1:exon

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SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

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SIO_000628: feature:7794-8087:-1:exon

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SIO_000628: feature:4245-4357:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3373-3768:-1:exon

LOC118179088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179088
product: scaffold attachment factor B1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_035348143.1
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3373..3768,3984..4050,4245..4357,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19485))
location: region:3373-19485:-1
so has part: feature:19021-19485:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:4245-4357:-1:exon
so has part: feature:3984-4050:-1:exon
so has part: feature:3373-3768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19485:-1:exon

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SIO_000628: feature:18018-18105:-1:exon

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SIO_000628: feature:14727-14754:-1:exon

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SIO_000628: feature:13300-13798:-1:exon

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SIO_000628: feature:12833-12882:-1:exon

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SIO_000628: feature:12028-12128:-1:exon

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SIO_000628: feature:11042-11142:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:3984-4050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3373-3768:-1:exon

LOC118179088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179088
product: scaffold attachment factor B1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348145.1
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3373..3768,3984..4050,4245..4357,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15411..15473,16568..16846,16932..16996,18018..18105,19021..19484))
location: region:3373-19484:-1
so has part: feature:19021-19484:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15411-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:4245-4357:-1:exon
so has part: feature:3984-4050:-1:exon
so has part: feature:3373-3768:-1:exon

position:19484:-1
position: 19484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15411-15473:-1:exon

position:15411:-1
position: 15411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8521-8657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7794-8087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6830-6967:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013-6052:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4245-4357:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3984-4050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3373-3768:-1:exon

LOC118179088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1-like isoform X3
translation: MAESQPATGQGEPVAPGGSGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPAVSEIVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNFQDIDMMDISVLDEAEIDNGNAVDCGEDCSADNILDSLSDSKENADAETKGLPDQPTAYAVRNLEASPQFSEIKEESGEIPVAMVEAEDVGNSFSAASSDLTVIKETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKRLVVAKGERSEQTIEEEKPDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKMISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEDKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSGSKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGGDRSMPGQSGPGHVMNRGGIPGRGGFTQGGNQSQIMQSGGIQGGFAGQERTNRLTETRFTRRY
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3642..3768,3984..4050,4245..4357,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15411..15473,16568..16846,16932..16996,18018..18105,19021..19209))
location: region:3642-19209:-1
so has part: feature:19021-19209:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15411-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:4245-4357:-1:exon
so has part: feature:3984-4050:-1:exon
so has part: feature:3642-3768:-1:exon

XP_035204036.1
type: Protein
SIO_000068: ncbiprotein

position:3642:-1
position: 3642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19209:-1
position: 19209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15411-15473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8521-8657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7794-8087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6830-6967:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013-6052:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4245-4357:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3984-4050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3642-3768:-1:exon

LOC118179088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1-like isoform X2
translation: MAESQPATGQGEPVAPGGSGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPAVSEIVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNFQDIDMMDISVLDEAEIDNGNAVDCGEDCSADNILDSLSDSKENADAETKGLPDQPTAYAVRNLEASPQFSEIKEESGEIPVAMVEAEDVGNSFSAASSDLTVIKVNCETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKRLVVAKGERSEQTIEEEKPDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKMISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEDKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSGSKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGGDRSMPGQSGPGHVMNRGGIPGRGGFTQGGNQSQIMQSGGIQGGFAGQERTNRLTETRFTRRY
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3642..3768,3984..4050,4245..4357,5071..5192,6013..6049,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19209))
location: region:3642-19209:-1
so has part: feature:19021-19209:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6049:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:4245-4357:-1:exon
so has part: feature:3984-4050:-1:exon
so has part: feature:3642-3768:-1:exon

XP_035204035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15402-15473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8521-8657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7794-8087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6830-6967:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013-6049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4245-4357:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3984-4050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3642-3768:-1:exon

LOC118179088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1-like isoform X5
translation: MAESQPATGQGEPVAPGGSGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPAVSEIVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNFQDIDMMDISVLDEAEIDNGNAVDCGEDCSADNILDSLSDSKENADAETKGLPDQPTAYAVRNLEASPQFSEIKEESGEIPVAMVEAEDVGNSFSAASSDLTVIKVNCETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKRLVVAKGERSEQTIEEEKPDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKMISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEDKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSGSKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRRGGFTQGGNQSQIMQSGGIQGGFAGQERTNRLTETRFTRRY
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3642..3768,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19209))
location: region:3642-19209:-1
so has part: feature:19021-19209:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:3642-3768:-1:exon

XP_035204038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15402-15473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8521-8657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7794-8087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6830-6967:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013-6052:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3642-3768:-1:exon

LOC118179088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1-like isoform X1
translation: MAESQPATGQGEPVAPGGSGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPAVSEIVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNFQDIDMMDISVLDEAEIDNGNAVDCGEDCSADNILDSLSDSKENADAETKGLPDQPTAYAVRNLEASPQFSEIKEESGEIPVAMVEAEDVGNSFSAASSDLTVIKVNCETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKRLVVAKGERSEQTIEEEKPDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKMISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEDKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSGSKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGGDRSMPGQSGPGHVMNRGGIPGRGGFTQGGNQSQIMQSGGIQGGFAGQERTNRLTETRFTRRY
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3642..3768,3984..4050,4245..4357,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19209))
location: region:3642-19209:-1
so has part: feature:19021-19209:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:4245-4357:-1:exon
so has part: feature:3984-4050:-1:exon
so has part: feature:3642-3768:-1:exon

XP_035204034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15402-15473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8521-8657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7794-8087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6830-6967:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013-6052:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4245-4357:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3984-4050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3642-3768:-1:exon

LOC118179088
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8884
gene: LOC118179088
product: scaffold attachment factor B1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XR_004756363.1
SIO_010081: LOC118179088
so part of: LOC118179088
location: complement(join(3687..3768,3984..4050,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19484))
location: region:3687-19484:-1
so has part: feature:19021-19484:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:3984-4050:-1:exon
so has part: feature:3687-3768:-1:exon

position:3687:-1
position: 3687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15402-15473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8521-8657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7794-8087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6830-6967:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013-6052:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3984-4050:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3687-3768:-1:exon

LOC118179088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1-like isoform X4
translation: MAESQPATGQGEPVAPGGSGGPSSEPETRRLSELRVIDLRAELRRRNLDSGGNKSVLTERLRKAIEEEGGNPDEIPAVSEIVNKKTSKRSSKGRRPDEEGVEDNGLEEDSGDGQEDIEASLDNFQDIDMMDISVLDEAEIDNGNAVDCGEDCSADNILDSLSDSKENADAETKGLPDQPTAYAVRNLEASPQFSEIKEESGEIPVAMVEAEDVGNSFSAASSDLTVIKVNCETEELPLEPENEKILDILGETCKSELLNEETSEVEQPHAQEASNVVPGKRLAEEEDVLAAAQLEEDALDLDSKSAQAMSRKEAKRLVVAKGERSEQTIEEEKPDSESLVLETLSDQSSKRFQGLEASSGETAEKGAGPEGKDSKEDAKKTEDKANSEESPATRESSTSEGGDQKKSPVEEDRDTKMISRDEKGRAGSGSGRNLWVSGLSSSTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSEEATKCISHLHRTELHGKMISVEKAKNEPAGKKPADKKEGEARKEKDRHHSADCKSEKSVGIKKEDKTDKKDDAKKSEKDGKDEGKEKDDQKAGPSDRSRASKSASRGTERTVVMDKSKGEPVISVKTSASKERSTKSQDRKSGSKEKQDILSFDKIKEQRERERQRQREREIRETERRRERERREREQRLQAIHERDERQRLQRERERLEFQRQRLDRERLERERLERERMHIEQERRREQERIQREREELRRQQEQLRYEQERRSAMRRPYDPDGRRDDPYWPEAKRMAMDDRYHSEFGRQDRFHDFDHRDRGRYQDHSLDRREGSRGIPDRDGQHYPDERHGGPDRHSRDSRDSWGGYGSDRRMNEGRGIPPQTRDGRDWGDHGRKLEGHQDRSWQGNVDGGMMGRDHERWQGVEASHKVETRAR
SIO_010081: LOC118179088
subclass of: SO_0000673
so part of: LOC118179088
location: complement(join(3728..3768,4245..4357,5071..5192,6013..6052,6830..6967,7794..8087,8521..8657,9194..9282,10019..10158,11042..11142,11240..11389,12028..12128,12833..12882,13300..13798,14727..14754,15402..15473,16568..16846,16932..16996,18018..18105,19021..19209))
location: region:3728-19209:-1
so has part: feature:19021-19209:-1:exon
so has part: feature:18018-18105:-1:exon
so has part: feature:16932-16996:-1:exon
so has part: feature:16568-16846:-1:exon
so has part: feature:15402-15473:-1:exon
so has part: feature:14727-14754:-1:exon
so has part: feature:13300-13798:-1:exon
so has part: feature:12833-12882:-1:exon
so has part: feature:12028-12128:-1:exon
so has part: feature:11240-11389:-1:exon
so has part: feature:11042-11142:-1:exon
so has part: feature:10019-10158:-1:exon
so has part: feature:9194-9282:-1:exon
so has part: feature:8521-8657:-1:exon
so has part: feature:7794-8087:-1:exon
so has part: feature:6830-6967:-1:exon
so has part: feature:6013-6052:-1:exon
so has part: feature:5071-5192:-1:exon
so has part: feature:4245-4357:-1:exon
so has part: feature:3728-3768:-1:exon

XP_035204037.1
type: Protein
SIO_000068: ncbiprotein

position:3728:-1
position: 3728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19021-19209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18018-18105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16932-16996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16568-16846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15402-15473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14727-14754:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13300-13798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12833-12882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12028-12128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11240-11389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11042-11142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10019-10158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9194-9282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8521-8657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7794-8087:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6830-6967:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013-6052:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5071-5192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4245-4357:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3728-3768:-1:exon

LOC118179152
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 19612..39430
location: region:19612-39430:1
so has part: feature:19612-39430:1:exon
subclass of: SO_0000010

118179152
type: Gene
SIO_000068: ncbigene

position:19612:1
position: 19612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39430:1
position: 39430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19612-39430:1:exon

LOC118179152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179152
product: scaffold attachment factor B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035348266.1
SIO_010081: LOC118179152
subclass of: SO_0000673
so part of: LOC118179152
location: join(19612..19953,20824..20908,22465..22529,22615..22821,23515..23574,24231..24305,30082..30148,31222..31322,32362..32511,32603..32679,33658..33797,34131..34222,34605..34711,35331..35624,35909..36046,36594..36636,37664..37785,38520..38632,38752..38803,39090..39430)
location: region:19612-39430:1
so has part: feature:19612-19953:1:exon
so has part: feature:20824-20908:1:exon
so has part: feature:22465-22529:1:exon
so has part: feature:22615-22821:1:exon
so has part: feature:23515-23574:1:exon
so has part: feature:24231-24305:1:exon
so has part: feature:30082-30148:1:exon
so has part: feature:31222-31322:1:exon
so has part: feature:32362-32511:1:exon
so has part: feature:32603-32679:1:exon
so has part: feature:33658-33797:1:exon
so has part: feature:34131-34222:1:exon
so has part: feature:34605-34711:1:exon
so has part: feature:35331-35624:1:exon
so has part: feature:35909-36046:1:exon
so has part: feature:36594-36636:1:exon
so has part: feature:37664-37785:1:exon
so has part: feature:38520-38632:1:exon
so has part: feature:38752-38803:1:exon
so has part: feature:39090-39430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19612-19953:1:exon

position:19953:1
position: 19953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20824-20908:1:exon

position:20824:1
position: 20824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20908:1
position: 20908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22465-22529:1:exon

position:22465:1
position: 22465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22529:1
position: 22529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22615-22821:1:exon

position:22615:1
position: 22615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22821:1
position: 22821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23515-23574:1:exon

position:23515:1
position: 23515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23574:1
position: 23574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24231-24305:1:exon

position:24231:1
position: 24231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24305:1
position: 24305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30082-30148:1:exon

position:30082:1
position: 30082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30148:1
position: 30148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:31222-31322:1:exon

position:31222:1
position: 31222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31322:1
position: 31322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:32362-32511:1:exon

position:32362:1
position: 32362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32511:1
position: 32511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:32603-32679:1:exon

position:32603:1
position: 32603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32679:1
position: 32679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:33658-33797:1:exon

position:33658:1
position: 33658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33797:1
position: 33797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:34131-34222:1:exon

position:34131:1
position: 34131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34222:1
position: 34222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:34605-34711:1:exon

position:34605:1
position: 34605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34711:1
position: 34711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:35331-35624:1:exon

position:35331:1
position: 35331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35624:1
position: 35624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:35909-36046:1:exon

position:35909:1
position: 35909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36046:1
position: 36046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:36594-36636:1:exon

position:36594:1
position: 36594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36636:1
position: 36636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:37664-37785:1:exon

position:37664:1
position: 37664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37785:1
position: 37785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:38520-38632:1:exon

position:38520:1
position: 38520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38632:1
position: 38632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:38752-38803:1:exon

position:38752:1
position: 38752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38803:1
position: 38803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:39090-39430:1:exon

position:39090:1
position: 39090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118179152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scaffold attachment factor B1-like
translation: MAESQPAAGLGDLTTLGGAPALGSEPETRRLSELRVIDLRAELKRRNLDSGGNKSVLTERLRKAIEDEGGDPDEIPVASELTKRMPKRTSKGRKPEEEGAEDNGLEENSRDGQEDIEASLDTLQDIDMMDISVLDEAEIDNSSAVDCGEDYSPDNILDSLSDNKDNVDAEMKELPDQLTENEEDYDEIENNVDSSSDLIEVKKTEKLHLEPGTVKEKHIPVFSTNTFGCFIFSPVEEDRDTKIISKDEKGRTASSSGRNFWVSGLASTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCITHLHKTELHGKIISVEKAKNEPAGKKPTEKKENEVKKETVSERPGSIKRDEKSDQKDDSKKTEDKDEKERKDKDELKPSSSDQPKTNKSGNKGTERTVVMDKSKGEPVISVKTSTASKDRSIKSQDRKSESKERQGIVPFDKIKAQRKMREAEQRRTRERRERQQHLQTIREREERERLEIARERLEIERQRLERERMERERLERERMHIEHERRREQDRIQREREELRRQHEQLRYEQERRSAMRRPYDIDGRRDDPYWPEAKRMAMNDRYHSDFGRQDRFHDFDHRDRGRYQDHSIDRRDGSRTMMGDRDGQHYPDERHGGPDRHSRDSRESWGSYGSDRRLSESRGIPPQSRDGRDWGDHGRKFEGHQDRSWQSSVDGGMIGRDHERWQGGGRGRPGHVMHRGGMSGRGGFIQGGNQSQMMHGGGMQGEGFAGQERASRPNDPRFNRRY
SIO_010081: LOC118179152
subclass of: SO_0000673
so part of: LOC118179152
location: join(19765..19953,20824..20908,22465..22529,22615..22821,23515..23574,24231..24305,30082..30148,31222..31322,32362..32511,32603..32679,33658..33797,34131..34222,34605..34711,35331..35624,35909..36046,36594..36636,37664..37785,38520..38632,38752..38803,39090..39219)
location: region:19765-39219:1
so has part: feature:19765-19953:1:exon
so has part: feature:20824-20908:1:exon
so has part: feature:22465-22529:1:exon
so has part: feature:22615-22821:1:exon
so has part: feature:23515-23574:1:exon
so has part: feature:24231-24305:1:exon
so has part: feature:30082-30148:1:exon
so has part: feature:31222-31322:1:exon
so has part: feature:32362-32511:1:exon
so has part: feature:32603-32679:1:exon
so has part: feature:33658-33797:1:exon
so has part: feature:34131-34222:1:exon
so has part: feature:34605-34711:1:exon
so has part: feature:35331-35624:1:exon
so has part: feature:35909-36046:1:exon
so has part: feature:36594-36636:1:exon
so has part: feature:37664-37785:1:exon
so has part: feature:38520-38632:1:exon
so has part: feature:38752-38803:1:exon
so has part: feature:39090-39219:1:exon

XP_035204157.1
type: Protein
SIO_000068: ncbiprotein

position:19765:1
position: 19765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39219:1
position: 39219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19765-19953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20824-20908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22465-22529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22615-22821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23515-23574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24231-24305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30082-30148:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31222-31322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32362-32511:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:32603-32679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:33658-33797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:34131-34222:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:34605-34711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:35331-35624:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:35909-36046:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36594-36636:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:37664-37785:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:38520-38632:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:38752-38803:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:39090-39219:1:exon

MICOS13
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MICOS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(40614..43984)
location: region:40614-43984:-1
so has part: feature:40614-43984:-1:exon
subclass of: SO_0000010

118179094
type: Gene
SIO_000068: ncbigene

position:40614:-1
position: 40614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43984:-1
position: 43984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40614-43984:-1:exon

MICOS13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MICOS13
product: mitochondrial contact site and cristae organizing system subunit 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348160.1
SIO_010081: MICOS13
subclass of: SO_0000673
so part of: MICOS13
location: complement(join(40614..40834,41886..41937,42664..42820,43869..43984))
location: region:40614-43984:-1
so has part: feature:43869-43984:-1:exon
so has part: feature:42664-42820:-1:exon
so has part: feature:41886-41937:-1:exon
so has part: feature:40614-40834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43869-43984:-1:exon

position:43869:-1
position: 43869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42664-42820:-1:exon

position:42664:-1
position: 42664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42820:-1
position: 42820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41886-41937:-1:exon

position:41886:-1
position: 41886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41937:-1
position: 41937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:40614-40834:-1:exon

position:40834:-1
position: 40834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MICOS13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MICOS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC13
translation: MAARLLPAVRFIIKGSLAGAAVYVAYDQGLLGSGAEGAEALKKAQTILLPAIKEWTSYVGWELPPTPKIDFSPSDSWNKGVQTVVSALSVAPTRACEYTVEGWKYMKHLVK
SIO_010081: MICOS13
subclass of: SO_0000673
so part of: MICOS13
location: complement(join(40737..40834,41886..41937,42664..42820,43869..43897))
location: region:40737-43897:-1
so has part: feature:43869-43897:-1:exon
so has part: feature:42664-42820:-1:exon
so has part: feature:41886-41937:-1:exon
so has part: feature:40737-40834:-1:exon

XP_035204051.1
type: Protein
SIO_000068: ncbiprotein

position:40737:-1
position: 40737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43897:-1
position: 43897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43869-43897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:42664-42820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41886-41937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40737-40834:-1:exon

HSD11B1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: HSD11B1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43969..54798
location: region:43969-54798:1
so has part: feature:43969-54798:1:exon
subclass of: SO_0000010

118179093
type: Gene
SIO_000068: ncbigene

position:43969:1
position: 43969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54798:1
position: 54798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43969-54798:1:exon

HSD11B1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HSD11B1L
product: hydroxysteroid 11-beta dehydrogenase 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035348159.1
SIO_010081: HSD11B1L
subclass of: SO_0000673
so part of: HSD11B1L
location: join(43969..44039,47386..47559,48199..48329,49353..49464,51160..51251,51874..51967,52530..52695,52985..54798)
location: region:43969-54798:1
so has part: feature:43969-44039:1:exon
so has part: feature:47386-47559:1:exon
so has part: feature:48199-48329:1:exon
so has part: feature:49353-49464:1:exon
so has part: feature:51160-51251:1:exon
so has part: feature:51874-51967:1:exon
so has part: feature:52530-52695:1:exon
so has part: feature:52985-54798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43969-44039:1:exon

position:44039:1
position: 44039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47386-47559:1:exon

position:47386:1
position: 47386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47559:1
position: 47559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48199-48329:1:exon

position:48199:1
position: 48199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48329:1
position: 48329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49353-49464:1:exon

position:49353:1
position: 49353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49464:1
position: 49464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51160-51251:1:exon

position:51160:1
position: 51160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51251:1
position: 51251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51874-51967:1:exon

position:51874:1
position: 51874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51967:1
position: 51967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:52530-52695:1:exon

position:52530:1
position: 52530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52695:1
position: 52695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:52985-54798:1:exon

position:52985:1
position: 52985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSD11B1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HSD11B1L
product: hydroxysteroid 11-beta dehydrogenase 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_035348158.1
SIO_010081: HSD11B1L
subclass of: SO_0000673
so part of: HSD11B1L
location: join(43973..44039,48199..48329,49353..49464,51160..51251,51874..51967,52530..52695,52985..54798)
location: region:43973-54798:1
so has part: feature:43973-44039:1:exon
so has part: feature:48199-48329:1:exon
so has part: feature:49353-49464:1:exon
so has part: feature:51160-51251:1:exon
so has part: feature:51874-51967:1:exon
so has part: feature:52530-52695:1:exon
so has part: feature:52985-54798:1:exon

position:43973:1
position: 43973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43973-44039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48199-48329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49353-49464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51160-51251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51874-51967:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52530-52695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52985-54798:1:exon

HSD11B1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HSD11B1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X2
translation: MRPLGKVLCATGIIAVLLAFFWKDTFNPESLSGARVLLTGASAGIGEQMAYHYARFGAEILLTARRESVLQKVMEKCLTLGAKKIFYIPADMSSPSEPEKVVQFAVQKLGGLDYLVLNHIGISPFQMWNGDVEYTRWLMQVNFFSYVALATAALPTLEKNKGSLVVVSSLTGKIPTPFTTSYSATKFALDGFFSSLRHELIMQKRNISVTLCILGLIDTDTALEKTRGKVYLTASPAAEAALAIIQAGATKVQEVFYPWWLQHICSLWVLFPCHRNQVLQSYYNYSSP
SIO_010081: HSD11B1L
subclass of: SO_0000673
so part of: HSD11B1L
location: join(47475..47559,48199..48329,49353..49464,51160..51251,51874..51967,52530..52695,52985..53171)
location: region:47475-53171:1
so has part: feature:47475-47559:1:exon
so has part: feature:48199-48329:1:exon
so has part: feature:49353-49464:1:exon
so has part: feature:51160-51251:1:exon
so has part: feature:51874-51967:1:exon
so has part: feature:52530-52695:1:exon
so has part: feature:52985-53171:1:exon

XP_035204050.1
type: Protein
SIO_000068: ncbiprotein

position:47475:1
position: 47475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53171:1
position: 53171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47475-47559:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48199-48329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49353-49464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51160-51251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51874-51967:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52530-52695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52985-53171:1:exon

HSD11B1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HSD11B1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X1
translation: MAYHYARFGAEILLTARRESVLQKVMEKCLTLGAKKIFYIPADMSSPSEPEKVVQFAVQKLGGLDYLVLNHIGISPFQMWNGDVEYTRWLMQVNFFSYVALATAALPTLEKNKGSLVVVSSLTGKIPTPFTTSYSATKFALDGFFSSLRHELIMQKRNISVTLCILGLIDTDTALEKTRGKVYLTASPAAEAALAIIQAGATKVQEVFYPWWLQHICSLWVLFPCHRNQVLQSYYNYSSP
SIO_010081: HSD11B1L
subclass of: SO_0000673
so part of: HSD11B1L
location: join(48258..48329,49353..49464,51160..51251,51874..51967,52530..52695,52985..53171)
location: region:48258-53171:1
so has part: feature:48258-48329:1:exon
so has part: feature:49353-49464:1:exon
so has part: feature:51160-51251:1:exon
so has part: feature:51874-51967:1:exon
so has part: feature:52530-52695:1:exon
so has part: feature:52985-53171:1:exon

XP_035204049.1
type: Protein
SIO_000068: ncbiprotein

position:48258:1
position: 48258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48258-48329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49353-49464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51160-51251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51874-51967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52530-52695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52985-53171:1:exon

CELF5
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(56558..118499)
location: region:56558-118499:-1
so has part: feature:56558-118499:-1:exon
subclass of: SO_0000010

118179091
type: Gene
SIO_000068: ncbigene

position:56558:-1
position: 56558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118499:-1
position: 118499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56558-118499:-1:exon

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035348157.1
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(56558..58229,60175..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,77958..78006,91040..91122,97081..97210,118476..118499))
location: region:56558-118499:-1
so has part: feature:118476-118499:-1:exon
so has part: feature:97081-97210:-1:exon
so has part: feature:91040-91122:-1:exon
so has part: feature:77958-78006:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60175-60339:-1:exon
so has part: feature:56558-58229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118476-118499:-1:exon

position:118476:-1
position: 118476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97081-97210:-1:exon

position:97081:-1
position: 97081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97210:-1
position: 97210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91040-91122:-1:exon

position:91040:-1
position: 91040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91122:-1
position: 91122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77958-78006:-1:exon

position:77958:-1
position: 77958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78006:-1
position: 78006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69325-69453:-1:exon

position:69325:-1
position: 69325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69453:-1
position: 69453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:68650-68729:-1:exon

position:68650:-1
position: 68650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68729:-1
position: 68729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:67337-67483:-1:exon

position:67337:-1
position: 67337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67483:-1
position: 67483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:63199-63343:-1:exon

position:63199:-1
position: 63199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63343:-1
position: 63343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:62376-62522:-1:exon

position:62376:-1
position: 62376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62522:-1
position: 62522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61829-61891:-1:exon

position:61829:-1
position: 61829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61891:-1
position: 61891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:61662-61745:-1:exon

position:61662:-1
position: 61662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61745:-1
position: 61745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:60449-60592:-1:exon

position:60449:-1
position: 60449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60592:-1
position: 60592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:60175-60339:-1:exon

position:60175:-1
position: 60175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60339:-1
position: 60339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:56558-58229:-1:exon

position:58229:-1
position: 58229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_035348154.1
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(56558..58229,60175..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,68650..68729,69325..69453,77955..78006,91040..91122,97081..97207))
location: region:56558-97207:-1
so has part: feature:97081-97207:-1:exon
so has part: feature:91040-91122:-1:exon
so has part: feature:77955-78006:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60175-60339:-1:exon
so has part: feature:56558-58229:-1:exon

position:97207:-1
position: 97207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97081-97207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91040-91122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77955-78006:-1:exon

position:77955:-1
position: 77955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60175-60339:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56558-58229:-1:exon

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_035348151.1
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(56558..58199,60175..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,77955..78006,91040..91122,97081..97207))
location: region:56558-97207:-1
so has part: feature:97081-97207:-1:exon
so has part: feature:91040-91122:-1:exon
so has part: feature:77955-78006:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60175-60339:-1:exon
so has part: feature:56558-58199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97081-97207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91040-91122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77955-78006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:60175-60339:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:56558-58199:-1:exon

position:58199:-1
position: 58199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035348155.1
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(56558..58229,60175..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,91040..91122))
location: region:56558-91122:-1
so has part: feature:91040-91122:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60175-60339:-1:exon
so has part: feature:56558-58229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91040-91122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60175-60339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:56558-58229:-1:exon

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_035348156.1
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(56558..58229,60175..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,77078..77217))
location: region:56558-77217:-1
so has part: feature:77078-77217:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60175-60339:-1:exon
so has part: feature:56558-58229:-1:exon

position:77217:-1
position: 77217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77078-77217:-1:exon

position:77078:-1
position: 77078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60175-60339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:56558-58229:-1:exon

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_035348153.1
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(56558..58229,60175..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,69556..69656))
location: region:56558-69656:-1
so has part: feature:69556-69656:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60175-60339:-1:exon
so has part: feature:56558-58229:-1:exon

position:69656:-1
position: 69656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69556-69656:-1:exon

position:69556:-1
position: 69556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60175-60339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:56558-58229:-1:exon

CELF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CELF5
product: CUGBP Elav-like family member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035348152.1
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(59237..59449,60175..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,77955..78006,91040..91122,97081..97207))
location: region:59237-97207:-1
so has part: feature:97081-97207:-1:exon
so has part: feature:91040-91122:-1:exon
so has part: feature:77955-78006:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60175-60339:-1:exon
so has part: feature:59237-59449:-1:exon

position:59237:-1
position: 59237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97081-97207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91040-91122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77955-78006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:60175-60339:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:59237-59449:-1:exon

position:59449:-1
position: 59449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X5
translation: MHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPTTPVAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFPNGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(60212..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,77958..78006,91040..91122,97081..97090))
location: region:60212-97090:-1
so has part: feature:97081-97090:-1:exon
so has part: feature:91040-91122:-1:exon
so has part: feature:77958-78006:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60212-60339:-1:exon

XP_035204048.1
type: Protein
SIO_000068: ncbiprotein

position:60212:-1
position: 60212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97090:-1
position: 97090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97081-97090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91040-91122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77958-78006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:60212-60339:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X3
translation: MHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPLMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPTTPVAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFPNGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(60212..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,68650..68729,69325..69453,77955..78006,91040..91122,97081..97090))
location: region:60212-97090:-1
so has part: feature:97081-97090:-1:exon
so has part: feature:91040-91122:-1:exon
so has part: feature:77955-78006:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60212-60339:-1:exon

XP_035204045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97081-97090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91040-91122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77955-78006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60212-60339:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X1
translation: MHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPTTPVAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFPNGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(60212..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,77955..78006,91040..91122,97081..97090))
location: region:60212-97090:-1
so has part: feature:97081-97090:-1:exon
so has part: feature:91040-91122:-1:exon
so has part: feature:77955-78006:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60212-60339:-1:exon

XP_035204042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97081-97090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91040-91122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77955-78006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:60212-60339:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X1
translation: MHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPTTPVAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFPNGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(60212..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,77955..78006,91040..91122,97081..97090))
location: region:60212-97090:-1
so has part: feature:97081-97090:-1:exon
so has part: feature:91040-91122:-1:exon
so has part: feature:77955-78006:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60212-60339:-1:exon

XP_035204043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97081-97090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91040-91122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77955-78006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:60212-60339:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X2
translation: MHFSQHQNISIPGDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPTTPVAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFPNGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(60212..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69453,69556..69592))
location: region:60212-69592:-1
so has part: feature:69556-69592:-1:exon
so has part: feature:69325-69453:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60212-60339:-1:exon

XP_035204044.1
type: Protein
SIO_000068: ncbiprotein

position:69592:-1
position: 69592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69556-69592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69325-69453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60212-60339:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X4
translation: MLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPTTPVAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFPNGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(60212..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69430))
location: region:60212-69430:-1
so has part: feature:69325-69430:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60212-60339:-1:exon

XP_035204046.1
type: Protein
SIO_000068: ncbiprotein

position:69430:-1
position: 69430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69325-69430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60212-60339:-1:exon

CELF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CELF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 5 isoform X4
translation: MLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHGSYLSPGVAFSPCHIQQIGAVSLNGLPTTPVAQTSGLHSPPLLGTTGVPGLVAPISNGFTSVVPFPNGHPTLETVYTNGFVPYSAQSPSVAETLHPAFTGVQQYAAVYPTTSITPIAQSIPQPPPILQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDANHPY
SIO_010081: CELF5
subclass of: SO_0000673
so part of: CELF5
location: complement(join(60212..60339,60449..60592,61662..61745,61829..61891,62376..62522,63199..63343,67337..67483,68650..68729,69325..69430))
location: region:60212-69430:-1
so has part: feature:69325-69430:-1:exon
so has part: feature:68650-68729:-1:exon
so has part: feature:67337-67483:-1:exon
so has part: feature:63199-63343:-1:exon
so has part: feature:62376-62522:-1:exon
so has part: feature:61829-61891:-1:exon
so has part: feature:61662-61745:-1:exon
so has part: feature:60449-60592:-1:exon
so has part: feature:60212-60339:-1:exon

XP_035204047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69325-69430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68650-68729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67337-67483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63199-63343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62376-62522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61829-61891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61662-61745:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60449-60592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60212-60339:-1:exon

LOC118179276
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(102795..105714)
location: region:102795-105714:-1
so has part: feature:102795-105714:-1:exon
subclass of: SO_0000010

118179276
type: Gene
SIO_000068: ncbigene

position:102795:-1
position: 102795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105714:-1
position: 105714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102795-105714:-1:exon

LOC118179276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179276
product: activated RNA polymerase II transcriptional coactivator p15-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035348462.1
SIO_010081: LOC118179276
subclass of: SO_0000673
so part of: LOC118179276
location: complement(join(102795..103441,104905..105013,105270..105386,105646..105714))
location: region:102795-105714:-1
so has part: feature:105646-105714:-1:exon
so has part: feature:105270-105386:-1:exon
so has part: feature:104905-105013:-1:exon
so has part: feature:102795-103441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105646-105714:-1:exon

position:105646:-1
position: 105646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105270-105386:-1:exon

position:105270:-1
position: 105270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105386:-1
position: 105386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104905-105013:-1:exon

position:104905:-1
position: 104905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105013:-1
position: 105013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102795-103441:-1:exon

position:103441:-1
position: 103441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118179276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179276
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: activated RNA polymerase II transcriptional coactivator p15-like
translation: MTGAEELAGPSGPGLGGGGGGGKKRKKEMSSKSRKRLKSEARPPGVTGKPQGQDSEEEGMFQIGKMQNVRVSCFKGKVLVDVREFCVDKEGHMKLGRKGIALSAAQWNQLKKIISDIDAAVKIF
SIO_010081: LOC118179276
subclass of: SO_0000673
so part of: LOC118179276
location: complement(join(103360..103441,104905..105013,105270..105386,105646..105714))
location: region:103360-105714:-1
so has part: feature:105646-105714:-1:exon
so has part: feature:105270-105386:-1:exon
so has part: feature:104905-105013:-1:exon
so has part: feature:103360-103441:-1:exon

XP_035204353.1
type: Protein
SIO_000068: ncbiprotein

position:103360:-1
position: 103360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105646-105714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105270-105386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104905-105013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103360-103441:-1:exon

NCLN
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: NCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(109585..118049)
location: region:109585-118049:-1
so has part: feature:109585-118049:-1:exon
subclass of: SO_0000010

118179090
type: Gene
SIO_000068: ncbigene

position:109585:-1
position: 109585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118049:-1
position: 118049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109585-118049:-1:exon

NCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NCLN
product: nicalin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035348150.1
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(109585..110793,111192..111270,111357..111410,112011..112171,112287..112325,112414..112501,112701..112879,113289..113428,113611..113699,114131..114234,114438..114518,114704..114798,115393..115537,115766..115956,117778..118049))
location: region:109585-118049:-1
so has part: feature:117778-118049:-1:exon
so has part: feature:115766-115956:-1:exon
so has part: feature:115393-115537:-1:exon
so has part: feature:114704-114798:-1:exon
so has part: feature:114438-114518:-1:exon
so has part: feature:114131-114234:-1:exon
so has part: feature:113611-113699:-1:exon
so has part: feature:113289-113428:-1:exon
so has part: feature:112701-112879:-1:exon
so has part: feature:112414-112501:-1:exon
so has part: feature:112287-112325:-1:exon
so has part: feature:112011-112171:-1:exon
so has part: feature:111357-111410:-1:exon
so has part: feature:111192-111270:-1:exon
so has part: feature:109585-110793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117778-118049:-1:exon

position:117778:-1
position: 117778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115766-115956:-1:exon

position:115766:-1
position: 115766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115956:-1
position: 115956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:115393-115537:-1:exon

position:115393:-1
position: 115393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115537:-1
position: 115537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114704-114798:-1:exon

position:114704:-1
position: 114704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114798:-1
position: 114798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114438-114518:-1:exon

position:114438:-1
position: 114438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114518:-1
position: 114518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:114131-114234:-1:exon

position:114131:-1
position: 114131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114234:-1
position: 114234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113611-113699:-1:exon

position:113611:-1
position: 113611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113699:-1
position: 113699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:113289-113428:-1:exon

position:113289:-1
position: 113289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113428:-1
position: 113428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:112701-112879:-1:exon

position:112701:-1
position: 112701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112879:-1
position: 112879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:112414-112501:-1:exon

position:112414:-1
position: 112414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112501:-1
position: 112501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:112287-112325:-1:exon

position:112287:-1
position: 112287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112325:-1
position: 112325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:112011-112171:-1:exon

position:112011:-1
position: 112011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112171:-1
position: 112171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:111357-111410:-1:exon

position:111357:-1
position: 111357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111410:-1
position: 111410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:111192-111270:-1:exon

position:111192:-1
position: 111192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111270:-1
position: 111270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:109585-110793:-1:exon

position:110793:-1
position: 110793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NCLN
product: nicalin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035348149.1
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(109585..110510,110694..110793,111192..111270,111357..111410,112011..112174,112287..112325,112414..112501,112701..112879,113289..113428,113611..113699,114131..114234,114438..114518,114704..114798,115393..115537,115766..115956,117778..118048))
location: region:109585-118048:-1
so has part: feature:117778-118048:-1:exon
so has part: feature:115766-115956:-1:exon
so has part: feature:115393-115537:-1:exon
so has part: feature:114704-114798:-1:exon
so has part: feature:114438-114518:-1:exon
so has part: feature:114131-114234:-1:exon
so has part: feature:113611-113699:-1:exon
so has part: feature:113289-113428:-1:exon
so has part: feature:112701-112879:-1:exon
so has part: feature:112414-112501:-1:exon
so has part: feature:112287-112325:-1:exon
so has part: feature:112011-112174:-1:exon
so has part: feature:111357-111410:-1:exon
so has part: feature:111192-111270:-1:exon
so has part: feature:110694-110793:-1:exon
so has part: feature:109585-110510:-1:exon

position:118048:-1
position: 118048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117778-118048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115766-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115393-115537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114704-114798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114438-114518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114131-114234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113611-113699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113289-113428:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112701-112879:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112414-112501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112287-112325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:112011-112174:-1:exon

position:112174:-1
position: 112174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:111357-111410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111192-111270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110694-110793:-1:exon

position:110694:-1
position: 110694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:109585-110510:-1:exon

position:110510:-1
position: 110510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NCLN
product: nicalin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035348148.1
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(109585..110793,111192..111270,111357..111410,112011..112174,112287..112325,112414..112501,112701..112879,113289..113428,113611..113699,114131..114234,114438..114518,114704..114798,115393..115537,115766..115956,117778..118048))
location: region:109585-118048:-1
so has part: feature:117778-118048:-1:exon
so has part: feature:115766-115956:-1:exon
so has part: feature:115393-115537:-1:exon
so has part: feature:114704-114798:-1:exon
so has part: feature:114438-114518:-1:exon
so has part: feature:114131-114234:-1:exon
so has part: feature:113611-113699:-1:exon
so has part: feature:113289-113428:-1:exon
so has part: feature:112701-112879:-1:exon
so has part: feature:112414-112501:-1:exon
so has part: feature:112287-112325:-1:exon
so has part: feature:112011-112174:-1:exon
so has part: feature:111357-111410:-1:exon
so has part: feature:111192-111270:-1:exon
so has part: feature:109585-110793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117778-118048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115766-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115393-115537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114704-114798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114438-114518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114131-114234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113611-113699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113289-113428:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112701-112879:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112414-112501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112287-112325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:112011-112174:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111357-111410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111192-111270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:109585-110793:-1:exon

NCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicalin isoform X2
translation: MLEEAGEVLESVLKASCLPLSFLLFVPAVLLLLGPPPAAEAAHEFTVYRMQQYELGGQPYGTRSAVLNTEARTVEADVLSRRCVMMRLVDFSYEQYQKALRQSAGAVVIILPRSISSVPQDVVRQFMEIEPEMLAMETIVPVYFAVEDEELLSIYEQTRAASASQGSASAAEVLLHTATANGFQMVTSGAQSKAINDWLIPSIEGRLTGLGGEDLPTVVIVAHYDSFGVAPWLSHGADSNGSGISVLLELARLFSRLYTYRRTHAGYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTLGRGNSLHLHVSKPPKEGTLQHAFLRELELVVASQFPEVKFSMVHKKINLAEDMLAWEHERFAIRRLPAFTISHLESHRDSLRNSIMDRRARVDTKALTRNTRIIAEALTRVIYNLTDKGAPADLQIFTDQMIQQEQLESVMDWLSSQPRAAQLIDKDSTFLSTLEYYMGRYLKDVKQHHVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLAVCIAAYLGVAYVAVQHFGLLYKMIQRLSLKTKQQ
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(110734..110793,111192..111270,111357..111410,112011..112171,112287..112325,112414..112501,112701..112879,113289..113428,113611..113699,114131..114234,114438..114518,114704..114798,115393..115537,115766..115956,117778..117958))
location: region:110734-117958:-1
so has part: feature:117778-117958:-1:exon
so has part: feature:115766-115956:-1:exon
so has part: feature:115393-115537:-1:exon
so has part: feature:114704-114798:-1:exon
so has part: feature:114438-114518:-1:exon
so has part: feature:114131-114234:-1:exon
so has part: feature:113611-113699:-1:exon
so has part: feature:113289-113428:-1:exon
so has part: feature:112701-112879:-1:exon
so has part: feature:112414-112501:-1:exon
so has part: feature:112287-112325:-1:exon
so has part: feature:112011-112171:-1:exon
so has part: feature:111357-111410:-1:exon
so has part: feature:111192-111270:-1:exon
so has part: feature:110734-110793:-1:exon

XP_035204041.1
type: Protein
SIO_000068: ncbiprotein

position:110734:-1
position: 110734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117958:-1
position: 117958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117778-117958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115766-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115393-115537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114704-114798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114438-114518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114131-114234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113611-113699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113289-113428:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112701-112879:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112414-112501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112287-112325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:112011-112171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111357-111410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111192-111270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110734-110793:-1:exon

NCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicalin isoform X1
translation: MLEEAGEVLESVLKASCLPLSFLLFVPAVLLLLGPPPAAEAAHEFTVYRMQQYELGGQPYGTRSAVLNTEARTVEADVLSRRCVMMRLVDFSYEQYQKALRQSAGAVVIILPRSISSVPQDVVRQFMEIEPEMLAMETIVPVYFAVEDEELLSIYEQTRAASASQGSASAAEVLLHTATANGFQMVTSGAQSKAINDWLIPSIEGRLTGLGGEDLPTVVIVAHYDSFGVAPWLSHGADSNGSGISVLLELARLFSRLYTYRRTHAGYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTLGRGNSLHLHVSKPPKEGTLQHAFLRELELVVASQFPEVKFSMVHKKINLAEDMLAWEHERFAIRRLPAFTISHLESHRDSLRNSIMDRRARVDTKALTRNTRIIAEALTRVIYNLTDKGAPADLQIFTDQMQIQQEQLESVMDWLSSQPRAAQLIDKDSTFLSTLEYYMGRYLKDVKQHHVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLAVCIAAYLGVAYVAVQHFGLLYKMIQRLSLKTKQQ
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(110734..110793,111192..111270,111357..111410,112011..112174,112287..112325,112414..112501,112701..112879,113289..113428,113611..113699,114131..114234,114438..114518,114704..114798,115393..115537,115766..115956,117778..117958))
location: region:110734-117958:-1
so has part: feature:117778-117958:-1:exon
so has part: feature:115766-115956:-1:exon
so has part: feature:115393-115537:-1:exon
so has part: feature:114704-114798:-1:exon
so has part: feature:114438-114518:-1:exon
so has part: feature:114131-114234:-1:exon
so has part: feature:113611-113699:-1:exon
so has part: feature:113289-113428:-1:exon
so has part: feature:112701-112879:-1:exon
so has part: feature:112414-112501:-1:exon
so has part: feature:112287-112325:-1:exon
so has part: feature:112011-112174:-1:exon
so has part: feature:111357-111410:-1:exon
so has part: feature:111192-111270:-1:exon
so has part: feature:110734-110793:-1:exon

XP_035204039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117778-117958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115766-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115393-115537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114704-114798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114438-114518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114131-114234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113611-113699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113289-113428:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112701-112879:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112414-112501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112287-112325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:112011-112174:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111357-111410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111192-111270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110734-110793:-1:exon

NCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicalin isoform X1
translation: MLEEAGEVLESVLKASCLPLSFLLFVPAVLLLLGPPPAAEAAHEFTVYRMQQYELGGQPYGTRSAVLNTEARTVEADVLSRRCVMMRLVDFSYEQYQKALRQSAGAVVIILPRSISSVPQDVVRQFMEIEPEMLAMETIVPVYFAVEDEELLSIYEQTRAASASQGSASAAEVLLHTATANGFQMVTSGAQSKAINDWLIPSIEGRLTGLGGEDLPTVVIVAHYDSFGVAPWLSHGADSNGSGISVLLELARLFSRLYTYRRTHAGYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTLGRGNSLHLHVSKPPKEGTLQHAFLRELELVVASQFPEVKFSMVHKKINLAEDMLAWEHERFAIRRLPAFTISHLESHRDSLRNSIMDRRARVDTKALTRNTRIIAEALTRVIYNLTDKGAPADLQIFTDQMQIQQEQLESVMDWLSSQPRAAQLIDKDSTFLSTLEYYMGRYLKDVKQHHVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLAVCIAAYLGVAYVAVQHFGLLYKMIQRLSLKTKQQ
SIO_010081: NCLN
subclass of: SO_0000673
so part of: NCLN
location: complement(join(110734..110793,111192..111270,111357..111410,112011..112174,112287..112325,112414..112501,112701..112879,113289..113428,113611..113699,114131..114234,114438..114518,114704..114798,115393..115537,115766..115956,117778..117958))
location: region:110734-117958:-1
so has part: feature:117778-117958:-1:exon
so has part: feature:115766-115956:-1:exon
so has part: feature:115393-115537:-1:exon
so has part: feature:114704-114798:-1:exon
so has part: feature:114438-114518:-1:exon
so has part: feature:114131-114234:-1:exon
so has part: feature:113611-113699:-1:exon
so has part: feature:113289-113428:-1:exon
so has part: feature:112701-112879:-1:exon
so has part: feature:112414-112501:-1:exon
so has part: feature:112287-112325:-1:exon
so has part: feature:112011-112174:-1:exon
so has part: feature:111357-111410:-1:exon
so has part: feature:111192-111270:-1:exon
so has part: feature:110734-110793:-1:exon

XP_035204040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117778-117958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115766-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115393-115537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114704-114798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114438-114518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114131-114234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113611-113699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113289-113428:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112701-112879:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112414-112501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112287-112325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:112011-112174:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111357-111410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111192-111270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110734-110793:-1:exon

S1PR4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: S1PR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(119509..121614)
location: region:119509-121614:-1
so has part: feature:119509-121614:-1:exon
subclass of: SO_0000010

118179277
type: Gene
SIO_000068: ncbigene

position:119509:-1
position: 119509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121614:-1
position: 121614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119509-121614:-1:exon

S1PR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: S1PR4
product: sphingosine-1-phosphate receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035348463.1
SIO_010081: S1PR4
subclass of: SO_0000673
so part of: S1PR4
location: complement(119509..121614)
location: region:119509-121614:-1
so has part: feature:119509-121614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119509-121614:-1:exon

S1PR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: S1PR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine 1-phosphate receptor 4
translation: MDGPGLSWLVNHSFPLPLGSAQYPELRLDLLDRKDSCLQLAAMRNVNIILQHYNFTGKLTNRQSRDEGMGLIRTTFVIISCIIILENLLVLLAILRCLRARRWVYSCIASITVSDLLAGVAYLSNLCLSGKKTFQLSPQLWFLREGILFIALAASTFSLLVTAIERYSAMVRPIAENEASKTLRLRGLIISCWLLAFIIGLLPLLGWNCLCDFNACSVLLPLYSKNYILFSVVMFSIILLGIIGLYISIFQLVQASSKQTTSRHSRKRSLRLLKTVLMILGAFIICWSPLFALMLFDVFCETQTCRLLHSLDWTLALAMLNSGVNPIIYSLRSVEVRRAVGSLLCCCCLRVGLCKPGDCLVITDINSGSSTESSLRYRESFRSSVALNARPRAPLSSNSSMMSNLPSL
SIO_010081: S1PR4
subclass of: SO_0000673
so part of: S1PR4
location: complement(120388..121614)
location: region:120388-121614:-1
so has part: feature:120388-121614:-1:exon

XP_035204354.1
type: Protein
SIO_000068: ncbiprotein

position:120388:-1
position: 120388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120388-121614:-1:exon

LOC118179257
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 127678..130220
location: region:127678-130220:1
so has part: feature:127678-130220:1:exon
subclass of: SO_0000010

118179257
type: Gene
SIO_000068: ncbigene

position:127678:1
position: 127678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130220:1
position: 130220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127678-130220:1:exon

LOC118179257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179257
product: mast cell protease 1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_035348435.1
SIO_010081: LOC118179257
subclass of: SO_0000673
so part of: LOC118179257
location: join(127678..127821,127912..128056,128246..128381,128669..128920,129263..130220)
location: region:127678-130220:1
so has part: feature:127678-127821:1:exon
so has part: feature:127912-128056:1:exon
so has part: feature:128246-128381:1:exon
so has part: feature:128669-128920:1:exon
so has part: feature:129263-130220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127678-127821:1:exon

position:127821:1
position: 127821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127912-128056:1:exon

position:127912:1
position: 127912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128056:1
position: 128056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128246-128381:1:exon

position:128246:1
position: 128246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128381:1
position: 128381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:128669-128920:1:exon

position:128669:1
position: 128669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128920:1
position: 128920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:129263-130220:1:exon

position:129263:1
position: 129263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118179257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mast cell protease 1A-like
translation: MCQTQLFLALLLLFSCPWANTSALWGQIVGGHEAQPHSHPYMAYLKIGKSACRGFLVAPDWVMTAAHCMGNATVILGAHNIHEPETTQQVQGVLRYHQHPEYDPTTVSNDIMLLKLTAKATLNNYVKTIPLPKTSSFLPTGTKCSIAGWGLIDKDQETSKLFETKVSIYSRRKCIHFYPHLNAGMVCAGSFHELRDSSQGDSGGPLVCNKVAQGIVSFGHDNPPGVYTRISNYLPWIKKNMKK
SIO_010081: LOC118179257
subclass of: SO_0000673
so part of: LOC118179257
location: join(127758..127821,127912..128056,128246..128381,128669..128920,129263..129397)
location: region:127758-129397:1
so has part: feature:127758-127821:1:exon
so has part: feature:127912-128056:1:exon
so has part: feature:128246-128381:1:exon
so has part: feature:128669-128920:1:exon
so has part: feature:129263-129397:1:exon

XP_035204326.1
type: Protein
SIO_000068: ncbiprotein

position:127758:1
position: 127758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129397:1
position: 129397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127758-127821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127912-128056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128246-128381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128669-128920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129263-129397:1:exon

LOC118179256
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 132279..135551
location: region:132279-135551:1
so has part: feature:132279-135551:1:exon
subclass of: SO_0000010

118179256
type: Gene
SIO_000068: ncbigene

position:132279:1
position: 132279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135551:1
position: 135551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132279-135551:1:exon

LOC118179256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179256
product: granzyme G-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035348434.1
SIO_010081: LOC118179256
subclass of: SO_0000673
so part of: LOC118179256
location: join(132279..132505,132614..132761,133651..133792,133948..134181,134807..135551)
location: region:132279-135551:1
so has part: feature:132279-132505:1:exon
so has part: feature:132614-132761:1:exon
so has part: feature:133651-133792:1:exon
so has part: feature:133948-134181:1:exon
so has part: feature:134807-135551:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132279-132505:1:exon

position:132505:1
position: 132505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132614-132761:1:exon

position:132614:1
position: 132614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132761:1
position: 132761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133651-133792:1:exon

position:133651:1
position: 133651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133792:1
position: 133792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133948-134181:1:exon

position:133948:1
position: 133948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134181:1
position: 134181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134807-135551:1:exon

position:134807:1
position: 134807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118179256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granzyme G-like
translation: MSLTSAVSWSLVSGYKTFLGAGRDPSCSLTSKASTEAEHAAMKHLQKLLLALTLVACPLAEASHAWNRMAGAGRAKASARPYMAYLEGKSGHFCGGFLVAPSWVMTAAQCFSHKPLTVILGAHNIQRREESWQMFEVQRYHRHPDFTNPMKGNDILLLKLKGNATSNSYVRTISFQKIKASGGTVCSIAGWGHKAPTATFHEANVTIHKQRDCLTVYPGLANNLICANSGSAGVPEEGDTGGPLVCNNKAYGIFSYQYKNRIGFYTHIAPYLPWVDSIMKLA
SIO_010081: LOC118179256
subclass of: SO_0000673
so part of: LOC118179256
location: join(132319..132505,132614..132761,133651..133792,133948..134181,134807..134944)
location: region:132319-134944:1
so has part: feature:132319-132505:1:exon
so has part: feature:132614-132761:1:exon
so has part: feature:133651-133792:1:exon
so has part: feature:133948-134181:1:exon
so has part: feature:134807-134944:1:exon

XP_035204325.1
type: Protein
SIO_000068: ncbiprotein

position:132319:1
position: 132319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134944:1
position: 134944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132319-132505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132614-132761:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133651-133792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133948-134181:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134807-134944:1:exon

LOC118179258
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(139453..142031)
location: region:139453-142031:-1
so has part: feature:139453-142031:-1:exon
subclass of: SO_0000011

118179258
type: Gene
SIO_000068: ncbigene

position:139453:-1
position: 139453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142031:-1
position: 142031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139453-142031:-1:exon

LOC118179258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118179258
product: uncharacterized LOC118179258
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004756411.1
SIO_010081: LOC118179258
subclass of: SO_0000673
so part of: LOC118179258
location: complement(join(139453..139486,139745..139755,140157..142031))
location: region:139453-142031:-1
so has part: feature:140157-142031:-1:exon
so has part: feature:139745-139755:-1:exon
so has part: feature:139453-139486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140157-142031:-1:exon

position:140157:-1
position: 140157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139745-139755:-1:exon

position:139745:-1
position: 139745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139755:-1
position: 139755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139453-139486:-1:exon

position:139486:-1
position: 139486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118179114
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(143914..155759)
location: region:143914-155759:-1
so has part: feature:143914-155759:-1:exon
subclass of: SO_0000010

118179114
type: Gene
SIO_000068: ncbigene

position:143914:-1
position: 143914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155759:-1
position: 155759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143914-155759:-1:exon

LOC118179114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179114
product: guanine nucleotide-binding protein subunit alpha-11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035348194.1
SIO_010081: LOC118179114
subclass of: SO_0000673
so part of: LOC118179114
location: complement(join(143914..148231,149872..150025,150790..150919,152245..152373,153418..153572,155245..155429,155542..155759))
location: region:143914-155759:-1
so has part: feature:155542-155759:-1:exon
so has part: feature:155245-155429:-1:exon
so has part: feature:153418-153572:-1:exon
so has part: feature:152245-152373:-1:exon
so has part: feature:150790-150919:-1:exon
so has part: feature:149872-150025:-1:exon
so has part: feature:143914-148231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155542-155759:-1:exon

position:155542:-1
position: 155542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155245-155429:-1:exon

position:155245:-1
position: 155245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155429:-1
position: 155429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153418-153572:-1:exon

position:153418:-1
position: 153418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153572:-1
position: 153572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152245-152373:-1:exon

position:152245:-1
position: 152245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152373:-1
position: 152373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:150790-150919:-1:exon

position:150790:-1
position: 150790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150919:-1
position: 150919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:149872-150025:-1:exon

position:149872:-1
position: 149872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150025:-1
position: 150025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:143914-148231:-1:exon

position:148231:-1
position: 148231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118179114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179114
product: guanine nucleotide-binding protein subunit alpha-11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035348195.1
SIO_010081: LOC118179114
subclass of: SO_0000673
so part of: LOC118179114
location: complement(join(143914..148231,149872..150025,150790..150919,152245..152373,153418..153572,155245..155429,155534..155567))
location: region:143914-155567:-1
so has part: feature:155534-155567:-1:exon
so has part: feature:155245-155429:-1:exon
so has part: feature:153418-153572:-1:exon
so has part: feature:152245-152373:-1:exon
so has part: feature:150790-150919:-1:exon
so has part: feature:149872-150025:-1:exon
so has part: feature:143914-148231:-1:exon

position:155567:-1
position: 155567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155534-155567:-1:exon

position:155534:-1
position: 155534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155245-155429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153418-153572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152245-152373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150790-150919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149872-150025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:143914-148231:-1:exon

LOC118179114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit alpha-11 isoform X1
translation: MSSGAPKVPRKVPGWAVGTGESGKSTFIKQMRIIHGSGYSEEDKKGFTKLVYQNIFTAMQSMIRAMETLKILYKYEQNKANAVLIREVDVEKVMTFEQPYVSAIKTLWNDPGIQECYDRRREYQLSDSAKYYLSDVDRIATPGYLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDYFPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV
SIO_010081: LOC118179114
subclass of: SO_0000673
so part of: LOC118179114
location: complement(join(148041..148231,149872..150025,150790..150919,152245..152373,153418..153572,155245..155429,155542..155593))
location: region:148041-155593:-1
so has part: feature:155542-155593:-1:exon
so has part: feature:155245-155429:-1:exon
so has part: feature:153418-153572:-1:exon
so has part: feature:152245-152373:-1:exon
so has part: feature:150790-150919:-1:exon
so has part: feature:149872-150025:-1:exon
so has part: feature:148041-148231:-1:exon

XP_035204085.1
type: Protein
SIO_000068: ncbiprotein

position:148041:-1
position: 148041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155593:-1
position: 155593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155542-155593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155245-155429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153418-153572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152245-152373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150790-150919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149872-150025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148041-148231:-1:exon

LOC118179114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit alpha-11 isoform X2
translation: MGSGCSGTGESGKSTFIKQMRIIHGSGYSEEDKKGFTKLVYQNIFTAMQSMIRAMETLKILYKYEQNKANAVLIREVDVEKVMTFEQPYVSAIKTLWNDPGIQECYDRRREYQLSDSAKYYLSDVDRIATPGYLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDYFPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV
SIO_010081: LOC118179114
subclass of: SO_0000673
so part of: LOC118179114
location: complement(join(148041..148231,149872..150025,150790..150919,152245..152373,153418..153572,155245..155429,155534..155552))
location: region:148041-155552:-1
so has part: feature:155534-155552:-1:exon
so has part: feature:155245-155429:-1:exon
so has part: feature:153418-153572:-1:exon
so has part: feature:152245-152373:-1:exon
so has part: feature:150790-150919:-1:exon
so has part: feature:149872-150025:-1:exon
so has part: feature:148041-148231:-1:exon

XP_035204086.1
type: Protein
SIO_000068: ncbiprotein

position:155552:-1
position: 155552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155534-155552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155245-155429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153418-153572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152245-152373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150790-150919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149872-150025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148041-148231:-1:exon

TLE5
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TLE5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <174559..182701
location: region:174559-182701:1
so has part: feature:174559-182701:1:exon
subclass of: SO_0000010

118155405
type: Gene
SIO_000068: ncbigene

position:174559:1
position: 174559
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:182701:1
position: 182701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174559-182701:1:exon

TLE5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TLE5
product: TLE family member 5, transcriptional modulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_035308671.1
SIO_010081: TLE5
subclass of: SO_0000673
so part of: TLE5
location: join(<174559..174621,174665..174819,176018..176081,178612..178656,180147..180209,181038..181112,181666..182701)
location: region:174559-182701:1
so has part: feature:174559-174621:1:exon
so has part: feature:174665-174819:1:exon
so has part: feature:176018-176081:1:exon
so has part: feature:178612-178656:1:exon
so has part: feature:180147-180209:1:exon
so has part: feature:181038-181112:1:exon
so has part: feature:181666-182701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174559-174621:1:exon

position:174621:1
position: 174621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174665-174819:1:exon

position:174665:1
position: 174665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174819:1
position: 174819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176018-176081:1:exon

position:176018:1
position: 176018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176081:1
position: 176081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178612-178656:1:exon

position:178612:1
position: 178612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178656:1
position: 178656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180147-180209:1:exon

position:180147:1
position: 180147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180209:1
position: 180209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:181038-181112:1:exon

position:181038:1
position: 181038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181112:1
position: 181112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181666-182701:1:exon

position:181666:1
position: 181666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLE5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TLE5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLE family member 5
translation: SRPGPPPVSVPPAAGRRCRLGAGPRAPAPLGAQRLLVSFKGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGSGLLSLSALGSQGHLTKEDKNGHDGDAHQDDDGEKSD
SIO_010081: TLE5
subclass of: SO_0000673
so part of: TLE5
location: join(<174559..174621,174665..174819,176018..176081,178612..178656,180147..180209,181038..181112,181666..181887)
location: region:174559-181887:1
so has part: feature:174559-174621:1:exon
so has part: feature:174665-174819:1:exon
so has part: feature:176018-176081:1:exon
so has part: feature:178612-178656:1:exon
so has part: feature:180147-180209:1:exon
so has part: feature:181038-181112:1:exon
so has part: feature:181666-181887:1:exon

XP_035164562.1
type: Protein
SIO_000068: ncbiprotein

position:181887:1
position: 181887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174559-174621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174665-174819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176018-176081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178612-178656:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180147-180209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181038-181112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181666-181887:1:exon

MIER2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(220388..234651)
location: region:220388-234651:-1
so has part: feature:220388-234651:-1:exon
subclass of: SO_0000010

118179202
type: Gene
SIO_000068: ncbigene

position:220388:-1
position: 220388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234651:-1
position: 234651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220388-234651:-1:exon

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MIER2
product: MIER family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_035348358.1
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(220388..223562,224390..224526,225556..225683,226486..226580,226672..226753,227508..227659,229302..229371,230039..230148,230788..230911,231575..231700,232451..232602,233162..233249,233814..233942,234641..234651))
location: region:220388-234651:-1
so has part: feature:234641-234651:-1:exon
so has part: feature:233814-233942:-1:exon
so has part: feature:233162-233249:-1:exon
so has part: feature:232451-232602:-1:exon
so has part: feature:231575-231700:-1:exon
so has part: feature:230788-230911:-1:exon
so has part: feature:230039-230148:-1:exon
so has part: feature:229302-229371:-1:exon
so has part: feature:227508-227659:-1:exon
so has part: feature:226672-226753:-1:exon
so has part: feature:226486-226580:-1:exon
so has part: feature:225556-225683:-1:exon
so has part: feature:224390-224526:-1:exon
so has part: feature:220388-223562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234641-234651:-1:exon

position:234641:-1
position: 234641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:233814-233942:-1:exon

position:233814:-1
position: 233814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233942:-1
position: 233942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233162-233249:-1:exon

position:233162:-1
position: 233162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233249:-1
position: 233249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:232451-232602:-1:exon

position:232451:-1
position: 232451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232602:-1
position: 232602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:231575-231700:-1:exon

position:231575:-1
position: 231575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231700:-1
position: 231700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230788-230911:-1:exon

position:230788:-1
position: 230788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230911:-1
position: 230911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:230039-230148:-1:exon

position:230039:-1
position: 230039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230148:-1
position: 230148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:229302-229371:-1:exon

position:229302:-1
position: 229302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229371:-1
position: 229371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:227508-227659:-1:exon

position:227508:-1
position: 227508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227659:-1
position: 227659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:226672-226753:-1:exon

position:226672:-1
position: 226672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226753:-1
position: 226753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:226486-226580:-1:exon

position:226486:-1
position: 226486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226580:-1
position: 226580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:225556-225683:-1:exon

position:225556:-1
position: 225556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225683:-1
position: 225683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:224390-224526:-1:exon

position:224390:-1
position: 224390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224526:-1
position: 224526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:220388-223562:-1:exon

position:223562:-1
position: 223562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MIER2
product: MIER family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_035348359.1
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(220388..223562,224390..224526,225556..225683,226486..226580,226672..226753,227508..227659,229302..229371,230039..230148,230788..230911,231575..231700,232451..232602,233162..233249,234641..234645))
location: region:220388-234645:-1
so has part: feature:234641-234645:-1:exon
so has part: feature:233162-233249:-1:exon
so has part: feature:232451-232602:-1:exon
so has part: feature:231575-231700:-1:exon
so has part: feature:230788-230911:-1:exon
so has part: feature:230039-230148:-1:exon
so has part: feature:229302-229371:-1:exon
so has part: feature:227508-227659:-1:exon
so has part: feature:226672-226753:-1:exon
so has part: feature:226486-226580:-1:exon
so has part: feature:225556-225683:-1:exon
so has part: feature:224390-224526:-1:exon
so has part: feature:220388-223562:-1:exon

position:234645:-1
position: 234645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234641-234645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233162-233249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232451-232602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231575-231700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230788-230911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230039-230148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229302-229371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227508-227659:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226672-226753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226486-226580:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225556-225683:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224390-224526:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:220388-223562:-1:exon

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MIER2
product: MIER family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_035348360.1
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(220388..223562,224390..224526,225580..225683,226486..226580,226672..226753,227508..227659,229302..229371,230039..230148,230788..230911,231575..231700,232451..232602,233162..233249,233814..234589))
location: region:220388-234589:-1
so has part: feature:233814-234589:-1:exon
so has part: feature:233162-233249:-1:exon
so has part: feature:232451-232602:-1:exon
so has part: feature:231575-231700:-1:exon
so has part: feature:230788-230911:-1:exon
so has part: feature:230039-230148:-1:exon
so has part: feature:229302-229371:-1:exon
so has part: feature:227508-227659:-1:exon
so has part: feature:226672-226753:-1:exon
so has part: feature:226486-226580:-1:exon
so has part: feature:225580-225683:-1:exon
so has part: feature:224390-224526:-1:exon
so has part: feature:220388-223562:-1:exon

position:234589:-1
position: 234589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233814-234589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233162-233249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232451-232602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231575-231700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230788-230911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230039-230148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229302-229371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227508-227659:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226672-226753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226486-226580:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225580-225683:-1:exon

position:225580:-1
position: 225580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:224390-224526:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:220388-223562:-1:exon

MIER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MIER2
product: MIER family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_035348361.1
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(220388..223562,224390..224526,225556..225683,226486..226580,226672..226753,227508..227659,229302..229371,230039..230148,230788..230911,231575..231695,232451..232585))
location: region:220388-232585:-1
so has part: feature:232451-232585:-1:exon
so has part: feature:231575-231695:-1:exon
so has part: feature:230788-230911:-1:exon
so has part: feature:230039-230148:-1:exon
so has part: feature:229302-229371:-1:exon
so has part: feature:227508-227659:-1:exon
so has part: feature:226672-226753:-1:exon
so has part: feature:226486-226580:-1:exon
so has part: feature:225556-225683:-1:exon
so has part: feature:224390-224526:-1:exon
so has part: feature:220388-223562:-1:exon

position:232585:-1
position: 232585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232451-232585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231575-231695:-1:exon

position:231695:-1
position: 231695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230788-230911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230039-230148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229302-229371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227508-227659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226672-226753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226486-226580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225556-225683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224390-224526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:220388-223562:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X2
translation: MGSADHRLNLAEILSQNYGVREEREEDEDTQEKQKSLEELEKSFSASQNSEMPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYDYFTQQTRLGRKKDYTDNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLTIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLLASCTRHTVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEDLPLIAGPVDLDRDPEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(223087..223562,224390..224526,225580..225683,226486..226580,226672..226753,227508..227659,229302..229371,230039..230148,230788..230911,231575..231700,232451..232594))
location: region:223087-232594:-1
so has part: feature:232451-232594:-1:exon
so has part: feature:231575-231700:-1:exon
so has part: feature:230788-230911:-1:exon
so has part: feature:230039-230148:-1:exon
so has part: feature:229302-229371:-1:exon
so has part: feature:227508-227659:-1:exon
so has part: feature:226672-226753:-1:exon
so has part: feature:226486-226580:-1:exon
so has part: feature:225580-225683:-1:exon
so has part: feature:224390-224526:-1:exon
so has part: feature:223087-223562:-1:exon

XP_035204251.1
type: Protein
SIO_000068: ncbiprotein

position:223087:-1
position: 223087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232594:-1
position: 232594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232451-232594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231575-231700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230788-230911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230039-230148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229302-229371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227508-227659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226672-226753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226486-226580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225580-225683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224390-224526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:223087-223562:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X1
translation: MGSADHRLNLAEILSQNYGVREEREEDEDTQEKQKSLEELEKSFSASQNSEMPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYDYFTQQTRLGRKKYVLHPGATDYTDNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLTIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLLASCTRHTVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEDLPLIAGPVDLDRDPEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(223087..223562,224390..224526,225556..225683,226486..226580,226672..226753,227508..227659,229302..229371,230039..230148,230788..230911,231575..231700,232451..232594))
location: region:223087-232594:-1
so has part: feature:232451-232594:-1:exon
so has part: feature:231575-231700:-1:exon
so has part: feature:230788-230911:-1:exon
so has part: feature:230039-230148:-1:exon
so has part: feature:229302-229371:-1:exon
so has part: feature:227508-227659:-1:exon
so has part: feature:226672-226753:-1:exon
so has part: feature:226486-226580:-1:exon
so has part: feature:225556-225683:-1:exon
so has part: feature:224390-224526:-1:exon
so has part: feature:223087-223562:-1:exon

XP_035204249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232451-232594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231575-231700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230788-230911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230039-230148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229302-229371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227508-227659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226672-226753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226486-226580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225556-225683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224390-224526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:223087-223562:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X1
translation: MGSADHRLNLAEILSQNYGVREEREEDEDTQEKQKSLEELEKSFSASQNSEMPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYDYFTQQTRLGRKKYVLHPGATDYTDNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLTIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLLASCTRHTVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEDLPLIAGPVDLDRDPEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(223087..223562,224390..224526,225556..225683,226486..226580,226672..226753,227508..227659,229302..229371,230039..230148,230788..230911,231575..231700,232451..232594))
location: region:223087-232594:-1
so has part: feature:232451-232594:-1:exon
so has part: feature:231575-231700:-1:exon
so has part: feature:230788-230911:-1:exon
so has part: feature:230039-230148:-1:exon
so has part: feature:229302-229371:-1:exon
so has part: feature:227508-227659:-1:exon
so has part: feature:226672-226753:-1:exon
so has part: feature:226486-226580:-1:exon
so has part: feature:225556-225683:-1:exon
so has part: feature:224390-224526:-1:exon
so has part: feature:223087-223562:-1:exon

XP_035204250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232451-232594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231575-231700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230788-230911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230039-230148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229302-229371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227508-227659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226672-226753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226486-226580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225556-225683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224390-224526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:223087-223562:-1:exon

MIER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MIER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X3
translation: MPFEELLALYGYEASDPISEQDSESNDITPNLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHDASDLFPNQPGSNNFLADEDKEPCSSPCASSMAEDSEEDSIPSNECKKEIMVGPQYQATVPILHLNRHSEKAYENEDQLLWDPNILPEREVEEFLYCAVKRRWDELSSSSLPEGEMVKDNEQALYELVKCNFNAEEALRRLRFNVKVIRDELCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYMWKKSERYDYFTQQTRLGRKKYVLHPGATDYTDNDLDGGEVENASRSRSSPPIPSATSCLDSHFGQDQLTIESTEPLSVESTACSLGSMSESGQGYECSTPSETNCSFDPAEETSSGTLLASCTRHTVTPSDTGLYALPPAGPGLAEKQETLQSSGETITMDFTLPADINEDLPLIAGPVDLDRDPEAVVAPAQVSLSVTDFGLIGIGDVNSFLTAHQACPAPVARSEPLSQ
SIO_010081: MIER2
subclass of: SO_0000673
so part of: MIER2
location: complement(join(223087..223562,224390..224526,225556..225683,226486..226580,226672..226753,227508..227659,229302..229371,230039..230148,230788..230911,231575..231691))
location: region:223087-231691:-1
so has part: feature:231575-231691:-1:exon
so has part: feature:230788-230911:-1:exon
so has part: feature:230039-230148:-1:exon
so has part: feature:229302-229371:-1:exon
so has part: feature:227508-227659:-1:exon
so has part: feature:226672-226753:-1:exon
so has part: feature:226486-226580:-1:exon
so has part: feature:225556-225683:-1:exon
so has part: feature:224390-224526:-1:exon
so has part: feature:223087-223562:-1:exon

XP_035204252.1
type: Protein
SIO_000068: ncbiprotein

position:231691:-1
position: 231691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231575-231691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230788-230911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230039-230148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229302-229371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227508-227659:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226672-226753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226486-226580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225556-225683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224390-224526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223087-223562:-1:exon

LOC118155406
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <261924..271539
location: region:261924-271539:1
so has part: feature:261924-271539:1:exon
subclass of: SO_0000010

118155406
type: Gene
SIO_000068: ncbigene

position:261924:1
position: 261924
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:271539:1
position: 271539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261924-271539:1:exon

LOC118155406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118155406
product: hippocampus abundant transcript 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035308672.1
SIO_010081: LOC118155406
subclass of: SO_0000673
so part of: LOC118155406
location: join(<261924..261938,263856..263951,264676..264738,265881..266008,266488..266602,267171..267389,268131..268244,268570..268641,269058..269170,269345..269442,270006..270172,270260..271539)
location: region:261924-271539:1
so has part: feature:261924-261938:1:exon
so has part: feature:263856-263951:1:exon
so has part: feature:264676-264738:1:exon
so has part: feature:265881-266008:1:exon
so has part: feature:266488-266602:1:exon
so has part: feature:267171-267389:1:exon
so has part: feature:268131-268244:1:exon
so has part: feature:268570-268641:1:exon
so has part: feature:269058-269170:1:exon
so has part: feature:269345-269442:1:exon
so has part: feature:270006-270172:1:exon
so has part: feature:270260-271539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261924-261938:1:exon

position:261938:1
position: 261938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263856-263951:1:exon

position:263856:1
position: 263856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263951:1
position: 263951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:264676-264738:1:exon

position:264676:1
position: 264676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264738:1
position: 264738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:265881-266008:1:exon

position:265881:1
position: 265881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266008:1
position: 266008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:266488-266602:1:exon

position:266488:1
position: 266488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266602:1
position: 266602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:267171-267389:1:exon

position:267171:1
position: 267171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267389:1
position: 267389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:268131-268244:1:exon

position:268131:1
position: 268131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268244:1
position: 268244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268570-268641:1:exon

position:268570:1
position: 268570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268641:1
position: 268641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:269058-269170:1:exon

position:269058:1
position: 269058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269170:1
position: 269170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:269345-269442:1:exon

position:269345:1
position: 269345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269442:1
position: 269442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:270006-270172:1:exon

position:270006:1
position: 270006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270172:1
position: 270172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:270260-271539:1:exon

position:270260:1
position: 270260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118155406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118155406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hippocampus abundant transcript 1 protein-like
translation: RDGAGRQGIGEPSVYHAVVVIFLEFFAWGLLTTPMLTVLHQTFPQHTFLMNGLIHGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLMKISPWWYFAVISMSGVFAVTFSVIFAYVADITQEHERSTAYGLVSATFAASLVTSPAIGAYLSQAYGDTLVVVLASGVALLDIGFILLAVPESLPEEMRPVSWGAPISWEQADPFASLRKVGQDSTVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFSSETVAAFIGVVGILSILAQTVVLGILMRSIGNKNTILLGLGFQILQLAWYGFGSQPWMMWAAGAVAAMSSITFPAISAMVSRNADPDQQGVVQGMITGIRGLCNGLGPALYGFVFYLFHVELNEMAEVETLGKASKPNMANPTDESSIIPGPPFLFGACSVLLSLLVALFIPEHNLALRSGSHKKHSNGAQTHAHSPQAGGSDGKEPLLEDSSV
SIO_010081: LOC118155406
subclass of: SO_0000673
so part of: LOC118155406
location: join(<261924..261938,263856..263951,264676..264738,265881..266008,266488..266602,267171..267389,268131..268244,268570..268641,269058..269170,269345..269442,270006..270172,270260..270469)
location: region:261924-270469:1
so has part: feature:261924-261938:1:exon
so has part: feature:263856-263951:1:exon
so has part: feature:264676-264738:1:exon
so has part: feature:265881-266008:1:exon
so has part: feature:266488-266602:1:exon
so has part: feature:267171-267389:1:exon
so has part: feature:268131-268244:1:exon
so has part: feature:268570-268641:1:exon
so has part: feature:269058-269170:1:exon
so has part: feature:269345-269442:1:exon
so has part: feature:270006-270172:1:exon
so has part: feature:270260-270469:1:exon

XP_035164563.1
type: Protein
SIO_000068: ncbiprotein

position:270469:1
position: 270469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261924-261938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263856-263951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264676-264738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265881-266008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266488-266602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267171-267389:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:268131-268244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268570-268641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:269058-269170:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:269345-269442:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:270006-270172:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:270260-270469:1:exon

MADCAM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MADCAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 278196..280736
location: region:278196-280736:1
so has part: feature:278196-280736:1:exon
subclass of: SO_0000010

118179081
type: Gene
SIO_000068: ncbigene

position:278196:1
position: 278196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280736:1
position: 280736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278196-280736:1:exon

MADCAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MADCAM1
product: mucosal vascular addressin cell adhesion molecule 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035348130.1
SIO_010081: MADCAM1
subclass of: SO_0000673
so part of: MADCAM1
location: join(278196..278244,278745..279011,279107..279421,279737..280390,280548..280736)
location: region:278196-280736:1
so has part: feature:278196-278244:1:exon
so has part: feature:278745-279011:1:exon
so has part: feature:279107-279421:1:exon
so has part: feature:279737-280390:1:exon
so has part: feature:280548-280736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278196-278244:1:exon

position:278244:1
position: 278244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278745-279011:1:exon

position:278745:1
position: 278745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279011:1
position: 279011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279107-279421:1:exon

position:279107:1
position: 279107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279421:1
position: 279421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279737-280390:1:exon

position:279737:1
position: 279737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280390:1
position: 280390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:280548-280736:1:exon

position:280548:1
position: 280548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MADCAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MADCAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosal addressin cell adhesion molecule 1
translation: MEVAPLLLLSALWGCSGRPVDKMVVEPRELLVRYGDSVQLNCSLPCTGGTVQWKGLDTNLGSIDSFPTHSVLHINSAEVATAGTKICQGTCGEEHYQKSVNLRVYALPDTLQLKAQPPALGPGQPATLRCSARRVYPPGGLAVAWYRGDQELQRNEPDTTETDEELFDVEATLSVAGEDVAEGELFRCELTLSIGTEIFTREASVAVSAGAVAEQPAAVESPRTTLTTTGSLSTTRPVATTALSPEPGVPMHDPTSALTVASQEPKTTSEQAAATDPPLVERPTPWDPMAGSPSARSATATVPSSSPMSPTAGGPAKAEGTAAHGTSRGSHTAGTGMMPTCSLRIWSLPPNGTRGRALRIECHAQCAQNATVRWLRTPVALSQYREEVAGSGSTLQLDHAEPRHQGHYQCILQGQHSQAVSLQLVVSDDMFSADPAIAMGTTMSLLGLIVTGVISRRLWKRFKSQYELS
SIO_010081: MADCAM1
subclass of: SO_0000673
so part of: MADCAM1
location: join(278196..278244,278745..279011,279107..279421,279737..280390,280548..280672)
location: region:278196-280672:1
so has part: feature:278196-278244:1:exon
so has part: feature:278745-279011:1:exon
so has part: feature:279107-279421:1:exon
so has part: feature:279737-280390:1:exon
so has part: feature:280548-280672:1:exon

XP_035204021.1
type: Protein
SIO_000068: ncbiprotein

position:280672:1
position: 280672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278196-278244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278745-279011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279107-279421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279737-280390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280548-280672:1:exon

TPGS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TPGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281730..283296
location: region:281730-283296:1
so has part: feature:281730-283296:1:exon
subclass of: SO_0000010

118179082
type: Gene
SIO_000068: ncbigene

position:281730:1
position: 281730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283296:1
position: 283296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281730-283296:1:exon

TPGS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TPGS1
product: tubulin polyglutamylase complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035348131.1
SIO_010081: TPGS1
subclass of: SO_0000673
so part of: TPGS1
location: join(281730..282098,282269..283296)
location: region:281730-283296:1
so has part: feature:281730-282098:1:exon
so has part: feature:282269-283296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281730-282098:1:exon

position:282098:1
position: 282098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282269-283296:1:exon

position:282269:1
position: 282269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPGS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TPGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase complex subunit 1
translation: MAAYEKRRAAVAPAPAPAAGSGPAEPLGAAAGGGPGGEAEFLLRSGVTAMVREALLKVLEARPEEPVSFLADYFERLVLGGPGAAEAAAELPAPPQRLARALWYVRLAHHSHRTAFNNNISTAYEVLGASGRRRRPGVDGRLYSELLRRICQLGAAPQEVAAALLRRVQCRDHEAVPFDVFRYGVLTCFVLLEFVAKAHTLYDVLDGGTGTADKRVCQAVLHTLEEALGGSDFSVPVRYLEAGSKLGPDCLALAMDRALQERKMSASMSREEFLKKATALFVAKVKPVD
SIO_010081: TPGS1
subclass of: SO_0000673
so part of: TPGS1
location: join(281761..282098,282269..282800)
location: region:281761-282800:1
so has part: feature:281761-282098:1:exon
so has part: feature:282269-282800:1:exon

XP_035204022.1
type: Protein
SIO_000068: ncbiprotein

position:281761:1
position: 281761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282800:1
position: 282800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281761-282098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282269-282800:1:exon

CDC34
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CDC34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 283571..288002
location: region:283571-288002:1
so has part: feature:283571-288002:1:exon
subclass of: SO_0000010

118179083
type: Gene
SIO_000068: ncbigene

position:283571:1
position: 283571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288002:1
position: 288002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283571-288002:1:exon

CDC34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CDC34
product: cell division cycle 34, ubiqiutin conjugating enzyme
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348132.1
SIO_010081: CDC34
subclass of: SO_0000673
so part of: CDC34
location: join(283571..283774,286215..286301,286863..286960,287043..287177,287612..288002)
location: region:283571-288002:1
so has part: feature:283571-283774:1:exon
so has part: feature:286215-286301:1:exon
so has part: feature:286863-286960:1:exon
so has part: feature:287043-287177:1:exon
so has part: feature:287612-288002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283571-283774:1:exon

position:283774:1
position: 283774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286215-286301:1:exon

position:286215:1
position: 286215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286301:1
position: 286301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286863-286960:1:exon

position:286863:1
position: 286863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286960:1
position: 286960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:287043-287177:1:exon

position:287043:1
position: 287043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287177:1
position: 287177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:287612-288002:1:exon

position:287612:1
position: 287612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CDC34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 R1
translation: MARPPVPSSQKALLLELKGLQEEPVEGFRVALVDEGDLYTWEVAIFGPPGTDYEGGYFKARLRFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDGVKVPTTLAEYCVKTKTPAPDEGSDLFYDDYYEDDEMEEEADSCYGDDDDSGNEES
SIO_010081: CDC34
subclass of: SO_0000673
so part of: CDC34
location: join(283598..283774,286215..286301,286863..286960,287043..287177,287612..287822)
location: region:283598-287822:1
so has part: feature:283598-283774:1:exon
so has part: feature:286215-286301:1:exon
so has part: feature:286863-286960:1:exon
so has part: feature:287043-287177:1:exon
so has part: feature:287612-287822:1:exon

XP_035204023.1
type: Protein
SIO_000068: ncbiprotein

position:283598:1
position: 283598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287822:1
position: 287822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283598-283774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286215-286301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286863-286960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287043-287177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287612-287822:1:exon

HCN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: HCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <290997..319871
location: region:290997-319871:1
so has part: feature:290997-319871:1:exon
subclass of: SO_0000010

118155407
type: Gene
SIO_000068: ncbigene

position:290997:1
position: 290997
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:319871:1
position: 319871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290997-319871:1:exon

HCN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HCN2
product: hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_035308673.1
SIO_010081: HCN2
subclass of: SO_0000673
so part of: HCN2
location: join(<290997..291009,306693..307044,312340..312763,314926..315087,316222..316440,316713..316859,317140..317380,317565..317729,318025..319871)
location: region:290997-319871:1
so has part: feature:290997-291009:1:exon
so has part: feature:306693-307044:1:exon
so has part: feature:312340-312763:1:exon
so has part: feature:314926-315087:1:exon
so has part: feature:316222-316440:1:exon
so has part: feature:316713-316859:1:exon
so has part: feature:317140-317380:1:exon
so has part: feature:317565-317729:1:exon
so has part: feature:318025-319871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290997-291009:1:exon

position:291009:1
position: 291009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306693-307044:1:exon

position:306693:1
position: 306693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307044:1
position: 307044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:312340-312763:1:exon

position:312340:1
position: 312340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312763:1
position: 312763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314926-315087:1:exon

position:314926:1
position: 314926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315087:1
position: 315087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:316222-316440:1:exon

position:316222:1
position: 316222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316440:1
position: 316440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:316713-316859:1:exon

position:316713:1
position: 316713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316859:1
position: 316859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:317140-317380:1:exon

position:317140:1
position: 317140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317380:1
position: 317380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:317565-317729:1:exon

position:317565:1
position: 317565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317729:1
position: 317729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:318025-319871:1:exon

position:318025:1
position: 318025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HCN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
translation: GRGGXGSPNGECRRGEPPRSPGAEPPREPKVSFSCGGGGGGGGGGGSASPGGAKAAEEGDDAGEEARGSQASFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPERIKKKYLKTWFVVDFVSSIPVDYVFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIINLIGMMLLLCHWDGCLQFLVPMLQDFPQNCWVSINGMVNDSWSELYSFALFKSMSHMLCIGYGKQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDSILGELNEPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSILTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQHDLNSGVFNNQENEIIQEIVKYDREMVQQAELQQHTAMYSPVQPQVTSAIATLQQAVAMSFCPQMASPLVGSMALGSPRMMRRLQYAQAVPSPFAVSPVLLQQSPPQQPQPPTPHANPSPSQDQAPPTALPASTSALAAASPPSQSPLASRTFAYGGAKGQLGSQLSLSQQQAPGSPPRLAVHKSTQALHTSSLSQDSRPLSASQPSLPHGLAAGSTQSPPASARESCASIGGGPAAASPGSAPPAGLRGPASSRGALSHPVPAGPPALQQDSGAARKDSVGSTPDTDPAKSRLSSNL
SIO_010081: HCN2
subclass of: SO_0000673
so part of: HCN2
location: join(<290997..291009,306693..307044,312340..312763,314926..315087,316222..316440,316713..316859,317140..317380,317565..317729,318025..318956)
location: region:290997-318956:1
so has part: feature:290997-291009:1:exon
so has part: feature:306693-307044:1:exon
so has part: feature:312340-312763:1:exon
so has part: feature:314926-315087:1:exon
so has part: feature:316222-316440:1:exon
so has part: feature:316713-316859:1:exon
so has part: feature:317140-317380:1:exon
so has part: feature:317565-317729:1:exon
so has part: feature:318025-318956:1:exon

XP_035164564.1
type: Protein
SIO_000068: ncbiprotein

position:318956:1
position: 318956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290997-291009:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306693-307044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312340-312763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314926-315087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316222-316440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316713-316859:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317140-317380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317565-317729:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318025-318956:1:exon

BSG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: BSG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291222..303668
location: region:291222-303668:1
so has part: feature:291222-303668:1:exon
subclass of: SO_0000010

118179266
type: Gene
SIO_000068: ncbigene

position:291222:1
position: 291222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303668:1
position: 303668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291222-303668:1:exon

BSG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: BSG
product: basigin (Ok blood group), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035348448.1
SIO_010081: BSG
subclass of: SO_0000673
so part of: BSG
location: join(291222..291328,297323..297479,299170..299258,299723..299850,300059..300332,302551..302575,302900..302968,303517..303668)
location: region:291222-303668:1
so has part: feature:291222-291328:1:exon
so has part: feature:297323-297479:1:exon
so has part: feature:299170-299258:1:exon
so has part: feature:299723-299850:1:exon
so has part: feature:300059-300332:1:exon
so has part: feature:302551-302575:1:exon
so has part: feature:302900-302968:1:exon
so has part: feature:303517-303668:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291222-291328:1:exon

position:291328:1
position: 291328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297323-297479:1:exon

position:297323:1
position: 297323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297479:1
position: 297479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299170-299258:1:exon

position:299170:1
position: 299170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299258:1
position: 299258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299723-299850:1:exon

position:299723:1
position: 299723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299850:1
position: 299850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300059-300332:1:exon

position:300059:1
position: 300059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300332:1
position: 300332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:302551-302575:1:exon

position:302551:1
position: 302551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302575:1
position: 302575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302900-302968:1:exon

position:302900:1
position: 302900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302968:1
position: 302968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:303517-303668:1:exon

position:303517:1
position: 303517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BSG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: BSG
product: basigin (Ok blood group), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_035348447.1
SIO_010081: BSG
subclass of: SO_0000673
so part of: BSG
location: join(291234..291328,295449..295796,297323..297479,299170..299258,299723..299850,300059..300332,302551..302575,302900..302968,303517..303668)
location: region:291234-303668:1
so has part: feature:291234-291328:1:exon
so has part: feature:295449-295796:1:exon
so has part: feature:297323-297479:1:exon
so has part: feature:299170-299258:1:exon
so has part: feature:299723-299850:1:exon
so has part: feature:300059-300332:1:exon
so has part: feature:302551-302575:1:exon
so has part: feature:302900-302968:1:exon
so has part: feature:303517-303668:1:exon

position:291234:1
position: 291234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291234-291328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295449-295796:1:exon

position:295449:1
position: 295449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295796:1
position: 295796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297323-297479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299170-299258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299723-299850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300059-300332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302551-302575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302900-302968:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:303517-303668:1:exon

BSG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: BSG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basigin isoform X1
translation: MAAGVEGPRGFLALLVLGVLAAGGEGTTGFIKSPLSQKRLTQDSVELYCEAIGNPIPEIQWWFEGNEPNETYAQLWDGARQDRVKINATYNLHSTSTIYIANLTGDDSGTYECRASSDPDRNHLSKSPKVKWIRSQANVFVIERPEIQTGFSESAGKLVLSCNLSDPYSAIEGREWKHGDKILQTDMESSTFTSYTIEGKKEEHSGIYECIYKTSPEIKGEINISVLPQVVAYKKSEHGNEGDTGVLICKNPSFPPVSTWVWYRNGQESIVNGSGRYIIKSSSNKTELRILKLNIEEDTGDYHCSATNSLGIGQATVNLRVRSRLAALWPFLGIVAEVLVLVTIIFIYEKRRKPDEVLDDDDGGSAPLKSNATNHKDKNVRQRNAN
SIO_010081: BSG
subclass of: SO_0000673
so part of: BSG
location: join(291247..291328,295449..295796,297323..297479,299170..299258,299723..299850,300059..300332,302551..302575,302900..302957)
location: region:291247-302957:1
so has part: feature:291247-291328:1:exon
so has part: feature:295449-295796:1:exon
so has part: feature:297323-297479:1:exon
so has part: feature:299170-299258:1:exon
so has part: feature:299723-299850:1:exon
so has part: feature:300059-300332:1:exon
so has part: feature:302551-302575:1:exon
so has part: feature:302900-302957:1:exon

XP_035204338.1
type: Protein
SIO_000068: ncbiprotein

position:291247:1
position: 291247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302957:1
position: 302957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291247-291328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295449-295796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297323-297479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299170-299258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299723-299850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300059-300332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302551-302575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302900-302957:1:exon

BSG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: BSG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basigin isoform X2
translation: MAAGVEGPRGFLALLVLGVLAAGGEGTSPEIQTGFSESAGKLVLSCNLSDPYSAIEGREWKHGDKILQTDMESSTFTSYTIEGKKEEHSGIYECIYKTSPEIKGEINISVLPQVVAYKKSEHGNEGDTGVLICKNPSFPPVSTWVWYRNGQESIVNGSGRYIIKSSSNKTELRILKLNIEEDTGDYHCSATNSLGIGQATVNLRVRSRLAALWPFLGIVAEVLVLVTIIFIYEKRRKPDEVLDDDDGGSAPLKSNATNHKDKNVRQRNAN
SIO_010081: BSG
subclass of: SO_0000673
so part of: BSG
location: join(291247..291328,297323..297479,299170..299258,299723..299850,300059..300332,302551..302575,302900..302957)
location: region:291247-302957:1
so has part: feature:291247-291328:1:exon
so has part: feature:297323-297479:1:exon
so has part: feature:299170-299258:1:exon
so has part: feature:299723-299850:1:exon
so has part: feature:300059-300332:1:exon
so has part: feature:302551-302575:1:exon
so has part: feature:302900-302957:1:exon

XP_035204339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291247-291328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297323-297479:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299170-299258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299723-299850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300059-300332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302551-302575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302900-302957:1:exon

POLRMT
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: POLRMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(320479..338629)
location: region:320479-338629:-1
so has part: feature:320479-338629:-1:exon
subclass of: SO_0000010

118155408
type: Gene
SIO_000068: ncbigene

position:320479:-1
position: 320479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338629:-1
position: 338629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320479-338629:-1:exon

POLRMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: POLRMT
product: RNA polymerase mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035308674.1
SIO_010081: POLRMT
subclass of: SO_0000673
so part of: POLRMT
location: complement(join(320479..321189,321992..322062,322626..322708,323186..323258,323422..323520,323782..323834,324560..324673,324968..325054,325675..325854,326795..326917,328851..328973,329521..330300,330510..330749,331405..331575,331903..332070,332226..332375,332822..333008,333561..333691,334026..334699,335352..335529,338585..338629))
location: region:320479-338629:-1
so has part: feature:338585-338629:-1:exon
so has part: feature:335352-335529:-1:exon
so has part: feature:334026-334699:-1:exon
so has part: feature:333561-333691:-1:exon
so has part: feature:332822-333008:-1:exon
so has part: feature:332226-332375:-1:exon
so has part: feature:331903-332070:-1:exon
so has part: feature:331405-331575:-1:exon
so has part: feature:330510-330749:-1:exon
so has part: feature:329521-330300:-1:exon
so has part: feature:328851-328973:-1:exon
so has part: feature:326795-326917:-1:exon
so has part: feature:325675-325854:-1:exon
so has part: feature:324968-325054:-1:exon
so has part: feature:324560-324673:-1:exon
so has part: feature:323782-323834:-1:exon
so has part: feature:323422-323520:-1:exon
so has part: feature:323186-323258:-1:exon
so has part: feature:322626-322708:-1:exon
so has part: feature:321992-322062:-1:exon
so has part: feature:320479-321189:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338585-338629:-1:exon

position:338585:-1
position: 338585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335352-335529:-1:exon

position:335352:-1
position: 335352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335529:-1
position: 335529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334026-334699:-1:exon

position:334026:-1
position: 334026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334699:-1
position: 334699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333561-333691:-1:exon

position:333561:-1
position: 333561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333691:-1
position: 333691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332822-333008:-1:exon

position:332822:-1
position: 332822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333008:-1
position: 333008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332226-332375:-1:exon

position:332226:-1
position: 332226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332375:-1
position: 332375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331903-332070:-1:exon

position:331903:-1
position: 331903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332070:-1
position: 332070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:331405-331575:-1:exon

position:331405:-1
position: 331405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331575:-1
position: 331575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:330510-330749:-1:exon

position:330510:-1
position: 330510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330749:-1
position: 330749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:329521-330300:-1:exon

position:329521:-1
position: 329521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330300:-1
position: 330300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:328851-328973:-1:exon

position:328851:-1
position: 328851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328973:-1
position: 328973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:326795-326917:-1:exon

position:326795:-1
position: 326795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326917:-1
position: 326917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:325675-325854:-1:exon

position:325675:-1
position: 325675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325854:-1
position: 325854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:324968-325054:-1:exon

position:324968:-1
position: 324968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325054:-1
position: 325054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:324560-324673:-1:exon

position:324560:-1
position: 324560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324673:-1
position: 324673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:323782-323834:-1:exon

position:323782:-1
position: 323782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323834:-1
position: 323834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:323422-323520:-1:exon

position:323422:-1
position: 323422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323520:-1
position: 323520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:323186-323258:-1:exon

position:323186:-1
position: 323186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323258:-1
position: 323258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:322626-322708:-1:exon

position:322626:-1
position: 322626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322708:-1
position: 322708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:321992-322062:-1:exon

position:321992:-1
position: 321992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322062:-1
position: 322062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:320479-321189:-1:exon

position:321189:-1
position: 321189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLRMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: POLRMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase, mitochondrial
translation: MHEGSVPGQGAAGTRSRGVWAERSVTPSGAPLTSRPSLLSAAGIPWSVLRTYSSISTKEKARRNAVCERSELLEVLKARVKQLQASSVPEVTVNKAELAPLGIDRQQEPLRRAVAARAAEEPPAPRQSAASPAQPNGWVEKLKREMYVRQAKVERKLSIAASKMTLVGQANTKVKVKAVPKTKPKAKPKAKKSPKETKATAWSQSHAGPSSAYACSKPRVVKMKQSVKAEKPPNVPEKRESNHQKIMQQTIQSNLECLLCLQQPEEAEKLLLLYHSSPVKRKLLNVGTYNIVMRSWARKGCLHRLNRVLSMLESAGLRPNLDSYAAELECMGRSQSCTKIIWRCVQQLKQDGFHVDELFQKCLFEGDEKETVLRAIRIVQPDYQLPPAPKPQTCKSALLNNFYSKEKVVSYPKLDFSVQELQERFQQQLEMELNNTITIESVESTKPLTPQALRARKQLAALRSQWRGAILQALQKSKHNMSQKRMMSGYNSLYPYLCLLPDEEYVDIMMQILNTLSPQGESLTVLARELGSKVYDRYLTQRKLHSRQLEKVQEIYKDYIHLLAKDGQPGEYLPREYWEKLVAEAGYGPSLTLKDCSWPYVLLMRLGVYLLEILVHSVKVPRNTLKPRLESRLIPVLYHIYSFRSSWQVGLIKPHPIFSQLVSDAAETTLTFSSSVIPMLCPPIPWTSPHFGAFVLSDTKLMRYVDGAFQHQQLLDQCPQVNLHPVLDALNQLGNCAWKINQPVLDIIISIFNDKGNEKLDIPPPLSEAPKPPVIPSNSSAWHKSQKHELLLCKKKAAEMHSLRMDALYKLSIANYVRDKVFWFPHNMDFRGRTYPCPPYFNHLGNDVTRAILLFAEGRPLGPKGLDWLKIHLINLTGLKKKNSLQERLDYANEIMEEILDSADRPLTGRKWWMNADEPWQVLACCMEIAKASRSPDPAAFVSHFPVHQDGSCNGLQHYAALGRDLIGAVSVNLMPCSVPQDVYSAVAQQVEEFRKKDAAEGLKIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDEFPEEYLWEASHYLVKQVFNGIKEMFSATRDIQHWLTESAKLIAQSGQTVEWVTPMGLPIVQPYYRVRSTVLNSNMQNLSVKSSTNTNQKPDTVKQKNAFPPNFIHSLDSTHMMLTALHCFRQGLTFVSVHDCYWTHALTVDVMNQICRQQFVALHSQKILQDLSKFMLKKYCSPSKESRAPWQKKLMEQLSNVPETGEFNLTKVMDSTYFFS
SIO_010081: POLRMT
subclass of: SO_0000673
so part of: POLRMT
location: complement(join(321140..321189,321992..322062,322626..322708,323186..323258,323422..323520,323782..323834,324560..324673,324968..325054,325675..325854,326795..326917,328851..328973,329521..330300,330510..330749,331405..331575,331903..332070,332226..332375,332822..333008,333561..333691,334026..334699,335352..335529,338585..338629))
location: region:321140-338629:-1
so has part: feature:338585-338629:-1:exon
so has part: feature:335352-335529:-1:exon
so has part: feature:334026-334699:-1:exon
so has part: feature:333561-333691:-1:exon
so has part: feature:332822-333008:-1:exon
so has part: feature:332226-332375:-1:exon
so has part: feature:331903-332070:-1:exon
so has part: feature:331405-331575:-1:exon
so has part: feature:330510-330749:-1:exon
so has part: feature:329521-330300:-1:exon
so has part: feature:328851-328973:-1:exon
so has part: feature:326795-326917:-1:exon
so has part: feature:325675-325854:-1:exon
so has part: feature:324968-325054:-1:exon
so has part: feature:324560-324673:-1:exon
so has part: feature:323782-323834:-1:exon
so has part: feature:323422-323520:-1:exon
so has part: feature:323186-323258:-1:exon
so has part: feature:322626-322708:-1:exon
so has part: feature:321992-322062:-1:exon
so has part: feature:321140-321189:-1:exon

XP_035164565.1
type: Protein
SIO_000068: ncbiprotein

position:321140:-1
position: 321140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338585-338629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335352-335529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334026-334699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333561-333691:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332822-333008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332226-332375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331903-332070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331405-331575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330510-330749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329521-330300:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:328851-328973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:326795-326917:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:325675-325854:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:324968-325054:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:324560-324673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:323782-323834:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:323422-323520:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:323186-323258:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:322626-322708:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:321992-322062:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:321140-321189:-1:exon

FGF22
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <338820..340088
location: region:338820-340088:1
so has part: feature:338820-340088:1:exon
subclass of: SO_0000010

118155409
type: Gene
SIO_000068: ncbigene

position:338820:1
position: 338820
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:340088:1
position: 340088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338820-340088:1:exon

FGF22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: FGF22
product: fibroblast growth factor 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_035308675.1
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(<338820..339257,339544..340088)
location: region:338820-340088:1
so has part: feature:338820-339257:1:exon
so has part: feature:339544-340088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338820-339257:1:exon

position:339257:1
position: 339257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339544-340088:1:exon

position:339544:1
position: 339544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: FGF22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 22
translation: PLVTGKQRLGSVSLQRSSAPGGSWPKGGQEQRPSPPQILAFPLLPLTRLQPLLPTVPLWGRRPSILPSLRLSVCGRRGSAVLSLPGGHSRGAGEGPLGEVAHLTAALRCPAGIVEIRSVRVGVVAIRAVHTGFYLAMNKQGRLYGSKEFSPNCKFTERIEENGYNTYASLRWRHRGRPMFLSLNSKGRPQRGGQTRRQHPSTHFLPMLIS
SIO_010081: FGF22
subclass of: SO_0000673
so part of: FGF22
location: join(<338820..339257,339544..339738)
location: region:338820-339738:1
so has part: feature:338820-339257:1:exon
so has part: feature:339544-339738:1:exon

XP_035164566.1
type: Protein
SIO_000068: ncbiprotein

position:339738:1
position: 339738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338820-339257:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339544-339738:1:exon

RNF126
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: RNF126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(342406..351327)
location: region:342406-351327:-1
so has part: feature:342406-351327:-1:exon
subclass of: SO_0000010

118179268
type: Gene
SIO_000068: ncbigene

position:342406:-1
position: 342406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351327:-1
position: 351327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342406-351327:-1:exon

RNF126
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RNF126
product: ring finger protein 126, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_035348450.1
SIO_010081: RNF126
subclass of: SO_0000673
so part of: RNF126
location: complement(join(342406..343678,343900..344015,344667..344760,344990..345059,345137..345205,345524..345732,346379..346442,348197..348255,351179..351326))
location: region:342406-351326:-1
so has part: feature:351179-351326:-1:exon
so has part: feature:348197-348255:-1:exon
so has part: feature:346379-346442:-1:exon
so has part: feature:345524-345732:-1:exon
so has part: feature:345137-345205:-1:exon
so has part: feature:344990-345059:-1:exon
so has part: feature:344667-344760:-1:exon
so has part: feature:343900-344015:-1:exon
so has part: feature:342406-343678:-1:exon

position:351326:-1
position: 351326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351179-351326:-1:exon

position:351179:-1
position: 351179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348197-348255:-1:exon

position:348197:-1
position: 348197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348255:-1
position: 348255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346379-346442:-1:exon

position:346379:-1
position: 346379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346442:-1
position: 346442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345524-345732:-1:exon

position:345524:-1
position: 345524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345732:-1
position: 345732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:345137-345205:-1:exon

position:345137:-1
position: 345137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345205:-1
position: 345205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:344990-345059:-1:exon

position:344990:-1
position: 344990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345059:-1
position: 345059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:344667-344760:-1:exon

position:344667:-1
position: 344667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344760:-1
position: 344760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:343900-344015:-1:exon

position:343900:-1
position: 343900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344015:-1
position: 344015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:342406-343678:-1:exon

position:343678:-1
position: 343678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF126
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RNF126
product: ring finger protein 126, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035348449.1
SIO_010081: RNF126
subclass of: SO_0000673
so part of: RNF126
location: complement(join(342406..343678,343900..344015,344667..344760,344990..345059,345137..345205,345524..345765,346379..346442,348197..348255,351179..351326))
location: region:342406-351326:-1
so has part: feature:351179-351326:-1:exon
so has part: feature:348197-348255:-1:exon
so has part: feature:346379-346442:-1:exon
so has part: feature:345524-345765:-1:exon
so has part: feature:345137-345205:-1:exon
so has part: feature:344990-345059:-1:exon
so has part: feature:344667-344760:-1:exon
so has part: feature:343900-344015:-1:exon
so has part: feature:342406-343678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351179-351326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348197-348255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346379-346442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345524-345765:-1:exon

position:345765:-1
position: 345765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:345137-345205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344990-345059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344667-344760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343900-344015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342406-343678:-1:exon

RNF126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RNF126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF126 isoform X2
translation: MAEASPQPGRFFCHCCAAEIAPRLPDYICPRCESGFIEELPEEPRNTDNETSSSTSTSDQSRHPFEGYGQFAFGIFDDGFEIPFGSNVQSEDNRDSENRREREHQSRHRYGARQPRARLAARRAAGRHEGVPTLEGIIQQLVNGIIAPTTIPNLGLGPWGVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTIQITQEHVDSGLECPVCKEDYTVGENVRQLPCNHLFHNSCIVPWLEQHDTCPVCRKSLSGQNTATNPPGLTGMNFSSSSSSSSSSSPSNENSSNNS
SIO_010081: RNF126
subclass of: SO_0000673
so part of: RNF126
location: complement(join(343529..343678,343900..344015,344667..344760,344990..345059,345137..345205,345524..345732,346379..346442,348197..348255,351179..351253))
location: region:343529-351253:-1
so has part: feature:351179-351253:-1:exon
so has part: feature:348197-348255:-1:exon
so has part: feature:346379-346442:-1:exon
so has part: feature:345524-345732:-1:exon
so has part: feature:345137-345205:-1:exon
so has part: feature:344990-345059:-1:exon
so has part: feature:344667-344760:-1:exon
so has part: feature:343900-344015:-1:exon
so has part: feature:343529-343678:-1:exon

XP_035204341.1
type: Protein
SIO_000068: ncbiprotein

position:343529:-1
position: 343529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351253:-1
position: 351253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351179-351253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348197-348255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346379-346442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345524-345732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345137-345205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344990-345059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344667-344760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343900-344015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343529-343678:-1:exon

RNF126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RNF126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF126 isoform X1
translation: MAEASPQPGRFFCHCCAAEIAPRLPDYICPRCESGFIEELPEEPRNTDNETSSSTSTSDQSRHPFENVDQHLFTLPQGYGQFAFGIFDDGFEIPFGSNVQSEDNRDSENRREREHQSRHRYGARQPRARLAARRAAGRHEGVPTLEGIIQQLVNGIIAPTTIPNLGLGPWGVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTIQITQEHVDSGLECPVCKEDYTVGENVRQLPCNHLFHNSCIVPWLEQHDTCPVCRKSLSGQNTATNPPGLTGMNFSSSSSSSSSSSPSNENSSNNS
SIO_010081: RNF126
subclass of: SO_0000673
so part of: RNF126
location: complement(join(343529..343678,343900..344015,344667..344760,344990..345059,345137..345205,345524..345765,346379..346442,348197..348255,351179..351253))
location: region:343529-351253:-1
so has part: feature:351179-351253:-1:exon
so has part: feature:348197-348255:-1:exon
so has part: feature:346379-346442:-1:exon
so has part: feature:345524-345765:-1:exon
so has part: feature:345137-345205:-1:exon
so has part: feature:344990-345059:-1:exon
so has part: feature:344667-344760:-1:exon
so has part: feature:343900-344015:-1:exon
so has part: feature:343529-343678:-1:exon

XP_035204340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351179-351253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348197-348255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346379-346442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345524-345765:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345137-345205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344990-345059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344667-344760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343900-344015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343529-343678:-1:exon

RNF126
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8884
gene: RNF126
product: ring finger protein 126, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XR_004756412.1
SIO_010081: RNF126
so part of: RNF126
location: complement(join(343640..343678,343900..344015,344630..344760,344990..345059,345137..345205,345524..345765,346379..346442,348197..348255,351179..351327))
location: region:343640-351327:-1
so has part: feature:351179-351327:-1:exon
so has part: feature:348197-348255:-1:exon
so has part: feature:346379-346442:-1:exon
so has part: feature:345524-345765:-1:exon
so has part: feature:345137-345205:-1:exon
so has part: feature:344990-345059:-1:exon
so has part: feature:344630-344760:-1:exon
so has part: feature:343900-344015:-1:exon
so has part: feature:343640-343678:-1:exon

position:343640:-1
position: 343640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351179-351327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348197-348255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346379-346442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345524-345765:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345137-345205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344990-345059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344630-344760:-1:exon

position:344630:-1
position: 344630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:343900-344015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343640-343678:-1:exon

PALM
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PALM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 368948..379902
location: region:368948-379902:1
so has part: feature:368948-379902:1:exon
subclass of: SO_0000010

118155410
type: Gene
SIO_000068: ncbigene

position:368948:1
position: 368948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379902:1
position: 379902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368948-379902:1:exon

PALM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PALM
product: paralemmin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035308676.1
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(368948..368983,370302..370480,373238..373286,374082..374162,374260..374390,375206..375332,375490..375511,375674..375733,376770..376901,378278..379902)
location: region:368948-379902:1
so has part: feature:368948-368983:1:exon
so has part: feature:370302-370480:1:exon
so has part: feature:373238-373286:1:exon
so has part: feature:374082-374162:1:exon
so has part: feature:374260-374390:1:exon
so has part: feature:375206-375332:1:exon
so has part: feature:375490-375511:1:exon
so has part: feature:375674-375733:1:exon
so has part: feature:376770-376901:1:exon
so has part: feature:378278-379902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368948-368983:1:exon

position:368983:1
position: 368983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370302-370480:1:exon

position:370302:1
position: 370302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370480:1
position: 370480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373238-373286:1:exon

position:373238:1
position: 373238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373286:1
position: 373286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:374082-374162:1:exon

position:374082:1
position: 374082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374162:1
position: 374162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374260-374390:1:exon

position:374260:1
position: 374260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374390:1
position: 374390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:375206-375332:1:exon

position:375206:1
position: 375206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375332:1
position: 375332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:375490-375511:1:exon

position:375490:1
position: 375490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375511:1
position: 375511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:375674-375733:1:exon

position:375674:1
position: 375674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375733:1
position: 375733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:376770-376901:1:exon

position:376770:1
position: 376770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376901:1
position: 376901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:378278-379902:1:exon

position:378278:1
position: 378278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PALM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PALM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paralemmin-1
translation: MQVLPSAEELDMGEFPRCRLCPWSQRPHLLCHGHEVHQNRLEELPRDGQGWDVRAAGTRRSMNLFAGAHETRAVEASTLQQERLQAIAEKRKRQTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEEDEAMKKQMQEDEVKTKELEETIQRLEKELETLENSSSVASTKENLAEVAAVPAKEEKAENVPNAQKSPLGTAVAKKVSSSPMKAVEGTDMMKAAMYSVEITVEKDRVTGETKVLSSTTLLPQNHCLQGVKVYEDELKVVHAVSAEAGALQNGAHPLSSSEVDELLHKADEVTLSEAKAGEEVPGSAPSSQKPTPRREITGLQAKPRENSTALPPGEGAEPSREQPVTMIFMGYQNVEDENETKKVLGLEGTIKAELVVIEDAESKPEPAGKDHAPPNGTALEPAAAAPQGEEAPGGQKLGANATEAKEAEQDMDAKKQRCKCCTVM
SIO_010081: PALM
subclass of: SO_0000673
so part of: PALM
location: join(368948..368983,370302..370480,373238..373286,374082..374162,374260..374390,375206..375332,375490..375511,375674..375733,376770..376901,378278..378846)
location: region:368948-378846:1
so has part: feature:368948-368983:1:exon
so has part: feature:370302-370480:1:exon
so has part: feature:373238-373286:1:exon
so has part: feature:374082-374162:1:exon
so has part: feature:374260-374390:1:exon
so has part: feature:375206-375332:1:exon
so has part: feature:375490-375511:1:exon
so has part: feature:375674-375733:1:exon
so has part: feature:376770-376901:1:exon
so has part: feature:378278-378846:1:exon

XP_035164567.1
type: Protein
SIO_000068: ncbiprotein

position:378846:1
position: 378846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368948-368983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370302-370480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373238-373286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374082-374162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374260-374390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375206-375332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375490-375511:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375674-375733:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376770-376901:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:378278-378846:1:exon

MISP
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MISP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 383758..390261
location: region:383758-390261:1
so has part: feature:383758-390261:1:exon
subclass of: SO_0000010

118179264
type: Gene
SIO_000068: ncbigene

position:383758:1
position: 383758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390261:1
position: 390261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383758-390261:1:exon

MISP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MISP
product: mitotic spindle positioning, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_035348444.1
SIO_010081: MISP
subclass of: SO_0000673
so part of: MISP
location: join(383758..383914,385916..388090,388788..388959)
location: region:383758-388959:1
so has part: feature:383758-383914:1:exon
so has part: feature:385916-388090:1:exon
so has part: feature:388788-388959:1:exon

position:388959:1
position: 388959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383758-383914:1:exon

position:383914:1
position: 383914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385916-388090:1:exon

position:385916:1
position: 385916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388090:1
position: 388090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:388788-388959:1:exon

position:388788:1
position: 388788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MISP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MISP
product: mitotic spindle positioning, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_035348443.1
SIO_010081: MISP
subclass of: SO_0000673
so part of: MISP
location: join(383759..383914,385916..388076,388998..389209,389432..389470,389698..390261)
location: region:383759-390261:1
so has part: feature:383759-383914:1:exon
so has part: feature:385916-388076:1:exon
so has part: feature:388998-389209:1:exon
so has part: feature:389432-389470:1:exon
so has part: feature:389698-390261:1:exon

position:383759:1
position: 383759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383759-383914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385916-388076:1:exon

position:388076:1
position: 388076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:388998-389209:1:exon

position:388998:1
position: 388998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389209:1
position: 389209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:389432-389470:1:exon

position:389432:1
position: 389432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389470:1
position: 389470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:389698-390261:1:exon

position:389698:1
position: 389698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MISP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MISP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitotic interactor and substrate of PLK1 isoform X1
translation: MDRVTRHLVFQLPQTAHKHGPTPADGDDDVFGPSPCGSQKVENGYEWRTRLKSPSSFLDGGKDVWTPSPDRESRLEVVRSGSQYDLRAYRGERKPSRLYEDDEQEQYRILPPNISPEKAKELEDERKEVIRGQVVRKSSTMAERWSSMDELSSINVGAGGQGEGKHKGTSTSSFAIYFDKPSSGRAATPVDPESIDREQINFAAARQQFLMLEKTNPGSLFSPGQQAMSPKPEAVTRISRQEWQSPETTTKAERGYGNAGAPSQSRTDTGTYQVYNVSYRTPVKAEVYAQGRDDAGRLHPLGKTSSLTKASSRDDLDSGLGEMYTEGSAGYVSNGSVSGEAFNGLVDMRNSSSSPDKELKASNETPIEREIRRAMEREENLWKERGIQRLTSSSELVEIQTKPLLSMHASPAPGRKGKDKSRASFYVQREIEQETKREEDLKRQGRLLGLYDRGTQQELDERKKVFEQEETPPPKPAPGRRAEERRSWIHEEQSSSHSFGPAEDTRAGRALSTHTVNLTRSQAAQPRFVLPAGERGRGEPLAHEHASASGSRWAREDSQGGRLPGSTPSPAGTGVLRKEYFSFPFWKPRISFVDNMGTQSPLRREKGLDGEDGRDEQYTLRTWKPQTSMLIEEEIRSDLQREEELQEQRRRRQLIDGSSLVSNDGFSKEGSRSRHSSAASGASGSYSVSGSPVPIPASRPAGVLGLVSSFTPLRVAGPAPDSTDGLSPDSARSSPFEERRRRTKEDGKYAGIEPVDKINTEVVESTRVGRHKSAMAQRWEAGLYVRDED
SIO_010081: MISP
subclass of: SO_0000673
so part of: MISP
location: join(386045..388076,388998..389209,389432..389470,389698..389784)
location: region:386045-389784:1
so has part: feature:386045-388076:1:exon
so has part: feature:388998-389209:1:exon
so has part: feature:389432-389470:1:exon
so has part: feature:389698-389784:1:exon

XP_035204334.1
type: Protein
SIO_000068: ncbiprotein

position:386045:1
position: 386045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389784:1
position: 389784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386045-388076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388998-389209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389432-389470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389698-389784:1:exon

MISP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MISP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitotic interactor and substrate of PLK1 isoform X2
translation: MDRVTRHLVFQLPQTAHKHGPTPADGDDDVFGPSPCGSQKVENGYEWRTRLKSPSSFLDGGKDVWTPSPDRESRLEVVRSGSQYDLRAYRGERKPSRLYEDDEQEQYRILPPNISPEKAKELEDERKEVIRGQVVRKSSTMAERWSSMDELSSINVGAGGQGEGKHKGTSTSSFAIYFDKPSSGRAATPVDPESIDREQINFAAARQQFLMLEKTNPGSLFSPGQQAMSPKPEAVTRISRQEWQSPETTTKAERGYGNAGAPSQSRTDTGTYQVYNVSYRTPVKAEVYAQGRDDAGRLHPLGKTSSLTKASSRDDLDSGLGEMYTEGSAGYVSNGSVSGEAFNGLVDMRNSSSSPDKELKASNETPIEREIRRAMEREENLWKERGIQRLTSSSELVEIQTKPLLSMHASPAPGRKGKDKSRASFYVQREIEQETKREEDLKRQGRLLGLYDRGTQQELDERKKVFEQEETPPPKPAPGRRAEERRSWIHEEQSSSHSFGPAEDTRAGRALSTHTVNLTRSQAAQPRFVLPAGERGRGEPLAHEHASASGSRWAREDSQGGRLPGSTPSPAGTGVLRKEYFSFPFWKPRISFVDNMGTQSPLRREKGLDGEDGRDEQYTLRTWKPQTSMLIEEEIRSDLQREEELQEQRRRRQLIDGSSLVSNDGFSKEGSRSRHSSGKGRKGPEVPSTRISPSLALKTSGWHPGVGSQR
SIO_010081: MISP
subclass of: SO_0000673
so part of: MISP
location: join(386045..388090,388788..388874)
location: region:386045-388874:1
so has part: feature:386045-388090:1:exon
so has part: feature:388788-388874:1:exon

XP_035204335.1
type: Protein
SIO_000068: ncbiprotein

position:388874:1
position: 388874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386045-388090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388788-388874:1:exon

LOC118179265
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(392223..414368)
location: region:392223-414368:-1
so has part: feature:392223-414368:-1:exon
subclass of: SO_0000010

118179265
type: Gene
SIO_000068: ncbigene

position:392223:-1
position: 392223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414368:-1
position: 414368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392223-414368:-1:exon

LOC118179265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179265
product: uncharacterized protein KIAA1958 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035348446.1
SIO_010081: LOC118179265
subclass of: SO_0000673
so part of: LOC118179265
location: complement(join(392223..393665,396364..397558,404707..404809,414142..414368))
location: region:392223-414368:-1
so has part: feature:414142-414368:-1:exon
so has part: feature:404707-404809:-1:exon
so has part: feature:396364-397558:-1:exon
so has part: feature:392223-393665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414142-414368:-1:exon

position:414142:-1
position: 414142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404707-404809:-1:exon

position:404707:-1
position: 404707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404809:-1
position: 404809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:396364-397558:-1:exon

position:396364:-1
position: 396364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397558:-1
position: 397558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:392223-393665:-1:exon

position:393665:-1
position: 393665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118179265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179265
product: uncharacterized protein KIAA1958 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035348445.1
SIO_010081: LOC118179265
subclass of: SO_0000673
so part of: LOC118179265
location: complement(join(392223..393665,396364..397558,398282..398366,404707..404809,414142..414368))
location: region:392223-414368:-1
so has part: feature:414142-414368:-1:exon
so has part: feature:404707-404809:-1:exon
so has part: feature:398282-398366:-1:exon
so has part: feature:396364-397558:-1:exon
so has part: feature:392223-393665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414142-414368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404707-404809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398282-398366:-1:exon

position:398282:-1
position: 398282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398366:-1
position: 398366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396364-397558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392223-393665:-1:exon

LOC118179265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1958 homolog isoform X1
translation: MNESVGAEKCGDVSSLCMDLSNLVTWAHTHGNICKQIPALEVVQTSGHPGRDNSILWMCGGGHAYHWPCGKLHFRSREESEAVEKRKRLTSSEAPSREANSGEKRIRVTSSFESARTGTAAPGSHSRSPGVTQQRDDTVYIVHNEPAPRENEKNRKPIKPFAAGRRVSASKGEIKTDVHMVKLGSNEDLQIISDDEQHVSDAESQADRTSQNIPSDSPPTSCVTAEVDLQMHHDQKTAIIKQPATPTPGFAPTEKPPLTLPSSLKSPVSNQKILESSFTRQGPRNPVEFTSETSRARNSTGLATPKEQLKQISVSNAEAKAPLESPTSVTFFQFEASVDVQQQLHLCCPECGTPGTAFSGDAAGNPPEGSKPSVSELTPWHSASLSPEGKNSDHPSPNTNRLKKRNRNASDIKIFRDWLVLHCPSEVREIYKLPPEDLDNYLAWFYSSAKKQNGMDFSANSLYFFQSSIDRYLKDHDYEYSVVKGVEFRTSQEALKLKHQHLAQKEREGEWAILENLTDENVDILRKNGLLSQMTPQGFLHLMLINIIRGFGASTHNQSQKLYWGQLVLRKDEAGLEYLEWKNDLHAEEAAGEAAPHLFARPDNPDNCPIQDYKKYAKRRPLDMLHDYDPLYLSPKPLYSMWDQVWYCRKSLTKARMEKMLKAIIQQVKGTKKRAKK
SIO_010081: LOC118179265
subclass of: SO_0000673
so part of: LOC118179265
location: complement(join(392830..393665,396364..397558,398282..398284))
location: region:392830-398284:-1
so has part: feature:398282-398284:-1:exon
so has part: feature:396364-397558:-1:exon
so has part: feature:392830-393665:-1:exon

XP_035204336.1
type: Protein
SIO_000068: ncbiprotein

position:392830:-1
position: 392830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398284:-1
position: 398284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398282-398284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:396364-397558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392830-393665:-1:exon

LOC118179265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1958 homolog isoform X2
translation: MDLSNLVTWAHTHGNICKQIPALEVVQTSGHPGRDNSILWMCGGGHAYHWPCGKLHFRSREESEAVEKRKRLTSSEAPSREANSGEKRIRVTSSFESARTGTAAPGSHSRSPGVTQQRDDTVYIVHNEPAPRENEKNRKPIKPFAAGRRVSASKGEIKTDVHMVKLGSNEDLQIISDDEQHVSDAESQADRTSQNIPSDSPPTSCVTAEVDLQMHHDQKTAIIKQPATPTPGFAPTEKPPLTLPSSLKSPVSNQKILESSFTRQGPRNPVEFTSETSRARNSTGLATPKEQLKQISVSNAEAKAPLESPTSVTFFQFEASVDVQQQLHLCCPECGTPGTAFSGDAAGNPPEGSKPSVSELTPWHSASLSPEGKNSDHPSPNTNRLKKRNRNASDIKIFRDWLVLHCPSEVREIYKLPPEDLDNYLAWFYSSAKKQNGMDFSANSLYFFQSSIDRYLKDHDYEYSVVKGVEFRTSQEALKLKHQHLAQKEREGEWAILENLTDENVDILRKNGLLSQMTPQGFLHLMLINIIRGFGASTHNQSQKLYWGQLVLRKDEAGLEYLEWKNDLHAEEAAGEAAPHLFARPDNPDNCPIQDYKKYAKRRPLDMLHDYDPLYLSPKPLYSMWDQVWYCRKSLTKARMEKMLKAIIQQVKGTKKRAKK
SIO_010081: LOC118179265
subclass of: SO_0000673
so part of: LOC118179265
location: complement(join(392830..393665,396364..397510))
location: region:392830-397510:-1
so has part: feature:396364-397510:-1:exon
so has part: feature:392830-393665:-1:exon

XP_035204337.1
type: Protein
SIO_000068: ncbiprotein

position:397510:-1
position: 397510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396364-397510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:392830-393665:-1:exon

PTBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PTBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 414718..444991
location: region:414718-444991:1
so has part: feature:414718-444991:1:exon
subclass of: SO_0000010

118179097
type: Gene
SIO_000068: ncbigene

position:414718:1
position: 414718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444991:1
position: 444991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414718-444991:1:exon

PTBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PTBP1
product: polypyrimidine tract binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_035348172.1
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(414718..414844,418921..418951,430000..430075,431032..431204,432162..432308,433646..433816,434615..434725,435103..435277,435870..435959,437166..437314,439938..439971,440470..440562,440917..441133,441372..441449,441846..444991)
location: region:414718-444991:1
so has part: feature:414718-414844:1:exon
so has part: feature:418921-418951:1:exon
so has part: feature:430000-430075:1:exon
so has part: feature:431032-431204:1:exon
so has part: feature:432162-432308:1:exon
so has part: feature:433646-433816:1:exon
so has part: feature:434615-434725:1:exon
so has part: feature:435103-435277:1:exon
so has part: feature:435870-435959:1:exon
so has part: feature:437166-437314:1:exon
so has part: feature:439938-439971:1:exon
so has part: feature:440470-440562:1:exon
so has part: feature:440917-441133:1:exon
so has part: feature:441372-441449:1:exon
so has part: feature:441846-444991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414718-414844:1:exon

position:414844:1
position: 414844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418921-418951:1:exon

position:418921:1
position: 418921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418951:1
position: 418951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:430000-430075:1:exon

position:430000:1
position: 430000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430075:1
position: 430075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431032-431204:1:exon

position:431032:1
position: 431032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431204:1
position: 431204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:432162-432308:1:exon

position:432162:1
position: 432162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432308:1
position: 432308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433646-433816:1:exon

position:433646:1
position: 433646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433816:1
position: 433816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434615-434725:1:exon

position:434615:1
position: 434615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434725:1
position: 434725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:435103-435277:1:exon

position:435103:1
position: 435103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435277:1
position: 435277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:435870-435959:1:exon

position:435870:1
position: 435870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435959:1
position: 435959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:437166-437314:1:exon

position:437166:1
position: 437166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437314:1
position: 437314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:439938-439971:1:exon

position:439938:1
position: 439938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439971:1
position: 439971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:440470-440562:1:exon

position:440470:1
position: 440470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440562:1
position: 440562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:440917-441133:1:exon

position:440917:1
position: 440917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441133:1
position: 441133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:441372-441449:1:exon

position:441372:1
position: 441372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441449:1
position: 441449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:441846-444991:1:exon

position:441846:1
position: 441846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PTBP1
product: polypyrimidine tract binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035348173.1
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(414718..414844,418921..418951,430000..430075,431032..431204,432162..432308,433646..433816,434615..434725,435103..435277,435870..435947,437166..437314,439938..439971,440470..440562,440917..441133,441372..441449,441846..444991)
location: region:414718-444991:1
so has part: feature:414718-414844:1:exon
so has part: feature:418921-418951:1:exon
so has part: feature:430000-430075:1:exon
so has part: feature:431032-431204:1:exon
so has part: feature:432162-432308:1:exon
so has part: feature:433646-433816:1:exon
so has part: feature:434615-434725:1:exon
so has part: feature:435103-435277:1:exon
so has part: feature:435870-435947:1:exon
so has part: feature:437166-437314:1:exon
so has part: feature:439938-439971:1:exon
so has part: feature:440470-440562:1:exon
so has part: feature:440917-441133:1:exon
so has part: feature:441372-441449:1:exon
so has part: feature:441846-444991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414718-414844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418921-418951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430000-430075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431032-431204:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432162-432308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433646-433816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434615-434725:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435103-435277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:435870-435947:1:exon

position:435947:1
position: 435947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:437166-437314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439938-439971:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440470-440562:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440917-441133:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441372-441449:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441846-444991:1:exon

PTBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PTBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypyrimidine tract-binding protein 1 isoform X1
translation: MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSSSAANGNDSKKFKGDSRSAGVPSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGIISASPYAGAGFPPTFAIPQAAGTVLRLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQTVQLPREGQEDHGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(414837..414844,418921..418951,430000..430075,431032..431204,432162..432308,433646..433816,434615..434725,435103..435277,435870..435959,437166..437314,439938..439971,440470..440562,440917..441133,441372..441449,441846..441978)
location: region:414837-441978:1
so has part: feature:414837-414844:1:exon
so has part: feature:418921-418951:1:exon
so has part: feature:430000-430075:1:exon
so has part: feature:431032-431204:1:exon
so has part: feature:432162-432308:1:exon
so has part: feature:433646-433816:1:exon
so has part: feature:434615-434725:1:exon
so has part: feature:435103-435277:1:exon
so has part: feature:435870-435959:1:exon
so has part: feature:437166-437314:1:exon
so has part: feature:439938-439971:1:exon
so has part: feature:440470-440562:1:exon
so has part: feature:440917-441133:1:exon
so has part: feature:441372-441449:1:exon
so has part: feature:441846-441978:1:exon

XP_035204063.1
type: Protein
SIO_000068: ncbiprotein

position:414837:1
position: 414837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441978:1
position: 441978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414837-414844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418921-418951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430000-430075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431032-431204:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432162-432308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433646-433816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434615-434725:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435103-435277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:435870-435959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437166-437314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439938-439971:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440470-440562:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440917-441133:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441372-441449:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441846-441978:1:exon

PTBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PTBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypyrimidine tract-binding protein 1 isoform X2
translation: MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSSSAANGNDSKKFKGDSRSAGVPSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQTVQLPREGQEDHGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI
SIO_010081: PTBP1
subclass of: SO_0000673
so part of: PTBP1
location: join(414837..414844,418921..418951,430000..430075,431032..431204,432162..432308,433646..433816,434615..434725,435103..435277,435870..435947,437166..437314,439938..439971,440470..440562,440917..441133,441372..441449,441846..441978)
location: region:414837-441978:1
so has part: feature:414837-414844:1:exon
so has part: feature:418921-418951:1:exon
so has part: feature:430000-430075:1:exon
so has part: feature:431032-431204:1:exon
so has part: feature:432162-432308:1:exon
so has part: feature:433646-433816:1:exon
so has part: feature:434615-434725:1:exon
so has part: feature:435103-435277:1:exon
so has part: feature:435870-435947:1:exon
so has part: feature:437166-437314:1:exon
so has part: feature:439938-439971:1:exon
so has part: feature:440470-440562:1:exon
so has part: feature:440917-441133:1:exon
so has part: feature:441372-441449:1:exon
so has part: feature:441846-441978:1:exon

XP_035204064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414837-414844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418921-418951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430000-430075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431032-431204:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432162-432308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433646-433816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434615-434725:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435103-435277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:435870-435947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437166-437314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439938-439971:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440470-440562:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440917-441133:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441372-441449:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441846-441978:1:exon

LOC118179098
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(421889..440668)
location: region:421889-440668:-1
so has part: feature:421889-440668:-1:exon
subclass of: SO_0000011

118179098
type: Gene
SIO_000068: ncbigene

position:421889:-1
position: 421889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440668:-1
position: 440668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421889-440668:-1:exon

LOC118179098
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118179098
product: uncharacterized LOC118179098
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004756367.1
SIO_010081: LOC118179098
subclass of: SO_0000673
so part of: LOC118179098
location: complement(join(421889..422283,431599..431601,440658..440668))
location: region:421889-440668:-1
so has part: feature:440658-440668:-1:exon
so has part: feature:431599-431601:-1:exon
so has part: feature:421889-422283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440658-440668:-1:exon

position:440658:-1
position: 440658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:431599-431601:-1:exon

position:431599:-1
position: 431599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431601:-1
position: 431601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421889-422283:-1:exon

position:422283:-1
position: 422283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLPPR3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PLPPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(448912..452867)
location: region:448912-452867:-1
so has part: feature:448912-452867:-1:exon
subclass of: SO_0000010

118179126
type: Gene
SIO_000068: ncbigene

position:448912:-1
position: 448912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452867:-1
position: 452867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448912-452867:-1:exon

PLPPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PLPPR3
product: phospholipid phosphatase related 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_035348218.1
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(448912..450988,451063..451236,451381..451438,451519..451714,451940..452069,452172..452357,452567..452867))
location: region:448912-452867:-1
so has part: feature:452567-452867:-1:exon
so has part: feature:452172-452357:-1:exon
so has part: feature:451940-452069:-1:exon
so has part: feature:451519-451714:-1:exon
so has part: feature:451381-451438:-1:exon
so has part: feature:451063-451236:-1:exon
so has part: feature:448912-450988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452567-452867:-1:exon

position:452567:-1
position: 452567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:452172-452357:-1:exon

position:452172:-1
position: 452172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452357:-1
position: 452357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451940-452069:-1:exon

position:451940:-1
position: 451940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452069:-1
position: 452069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:451519-451714:-1:exon

position:451519:-1
position: 451519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451714:-1
position: 451714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451381-451438:-1:exon

position:451381:-1
position: 451381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451438:-1
position: 451438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451063-451236:-1:exon

position:451063:-1
position: 451063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451236:-1
position: 451236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:448912-450988:-1:exon

position:450988:-1
position: 450988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLPPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PLPPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase-related protein type 3
translation: MSRQRGLSRQPSLRPTCCHSTPGERWGGGGGSTTPVHWGPPRGAERRGDAGCPPAGTPARPSTMISPKDKAKAPKDSMTLLPCFYFVELPIVASSIVTLYFLELTDLFKPAKVGFQCYDRALSMPYVETNEELIPLLMLLSLAFAAPAASIMVGEGIVYCLQSRLKGRAGAEGSINAGGCNFNSFLRRTVRFVGVHVFGLCATALVTDVIQLATGYHAPFFLTVCKPNYTLLGTPCDANPYITQDICSGTDKHAILSARKTFPSQHATLSAFAAVYVSMYFNSIISDSTKLLKPILVFAFAIAAGICGLTQITQYRSHPADVYVGFLIGSGIAAYLAYHAVGNFRAPTERAPAPAPAKDALRALTQRGHDSVYHQNKSVSTDELNPQTRLEEAARPVPREKNSLGSLKRASVDVDLLAPRSPMGKENMVTFSNTLPRVNTPSMDDPARRHMTIHVPVDASRSKQLITEWKQKSLEGRSMTLAEEAGALGRGAGDADEDVPPSLYPTVQARPAERAAMGPRVLIQPRPGASQLVHIPEESQAGAGGAAGGGAAVRAKWVMVAEKGGAQRVANPPRLMQVIAMSKQQSMVSVTPKHSETSSSSTSSDSSQYRSPSERDSSSIITIDAHAPHHPVVHLSAGNGPWEWKSAQKGPEGPDAYELGEMGKDFRGFRPAKSAGVSPGSSVSDIEQDEPRYGSLATINVVAGGGGERGDAPPEGLLGTASRESTLRRKPAEKDGYTDSEADNYYRKIQASRRFKD
SIO_010081: PLPPR3
subclass of: SO_0000673
so part of: PLPPR3
location: complement(join(449723..450988,451063..451236,451381..451438,451519..451714,451940..452069,452172..452357,452567..452830))
location: region:449723-452830:-1
so has part: feature:452567-452830:-1:exon
so has part: feature:452172-452357:-1:exon
so has part: feature:451940-452069:-1:exon
so has part: feature:451519-451714:-1:exon
so has part: feature:451381-451438:-1:exon
so has part: feature:451063-451236:-1:exon
so has part: feature:449723-450988:-1:exon

XP_035204109.1
type: Protein
SIO_000068: ncbiprotein

position:449723:-1
position: 449723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452830:-1
position: 452830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452567-452830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452172-452357:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451940-452069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451519-451714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451381-451438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451063-451236:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449723-450988:-1:exon

LOC118179128
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 454803..472018
location: region:454803-472018:1
so has part: feature:454803-472018:1:exon
subclass of: SO_0000010

118179128
type: Gene
SIO_000068: ncbigene

position:454803:1
position: 454803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472018:1
position: 472018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454803-472018:1:exon

LOC118179128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179128
product: complement factor D-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035348221.1
SIO_010081: LOC118179128
subclass of: SO_0000673
so part of: LOC118179128
location: join(454803..454962,455358..455511,455743..455887,456235..456523,472008..472018)
location: region:454803-472018:1
so has part: feature:454803-454962:1:exon
so has part: feature:455358-455511:1:exon
so has part: feature:455743-455887:1:exon
so has part: feature:456235-456523:1:exon
so has part: feature:472008-472018:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454803-454962:1:exon

position:454962:1
position: 454962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455358-455511:1:exon

position:455358:1
position: 455358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455511:1
position: 455511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:455743-455887:1:exon

position:455743:1
position: 455743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455887:1
position: 455887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456235-456523:1:exon

position:456235:1
position: 456235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456523:1
position: 456523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472008-472018:1:exon

position:472008:1
position: 472008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118179128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179128
product: complement factor D-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035348220.1
SIO_010081: LOC118179128
subclass of: SO_0000673
so part of: LOC118179128
location: join(454803..454962,455358..455511,455743..455887,456235..456492,456775..457269)
location: region:454803-457269:1
so has part: feature:454803-454962:1:exon
so has part: feature:455358-455511:1:exon
so has part: feature:455743-455887:1:exon
so has part: feature:456235-456492:1:exon
so has part: feature:456775-457269:1:exon

position:457269:1
position: 457269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454803-454962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455358-455511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455743-455887:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456235-456492:1:exon

position:456492:1
position: 456492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:456775-457269:1:exon

position:456775:1
position: 456775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118179128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement factor D-like isoform X1
translation: MGPCPAPVLILAMLLLLGAVVNAQPRGRILGGYEAKPHLRPYMASLQLDGQHVCGGFLIAEQWVLSAAHCTEGTNGKLFQVLLGAHSLTEPEPHKRLYQVRAQIPHPGSNIHNNKDDLLLLQLEEKAELNAHVKVLPFQREDRDVEADTVCEAAGWGTVTHSGRRPDKLQQVERPVISRDLCNHRTRHDHTITEKMMCTDSRKKDTCKGDSGGPLVCNGVAEGVVTAGSRVCGNYKKPAIYTRIAPYAAWIDGIMASEAGDGAAR
SIO_010081: LOC118179128
subclass of: SO_0000673
so part of: LOC118179128
location: join(454896..454962,455358..455511,455743..455887,456235..456492,456775..456948)
location: region:454896-456948:1
so has part: feature:454896-454962:1:exon
so has part: feature:455358-455511:1:exon
so has part: feature:455743-455887:1:exon
so has part: feature:456235-456492:1:exon
so has part: feature:456775-456948:1:exon

XP_035204111.1
type: Protein
SIO_000068: ncbiprotein

position:454896:1
position: 454896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456948:1
position: 456948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454896-454962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455358-455511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455743-455887:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456235-456492:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456775-456948:1:exon

LOC118179128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118179128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement factor D-like isoform X2
translation: MGPCPAPVLILAMLLLLGAVVNAQPRGRILGGYEAKPHLRPYMASLQLDGQHVCGGFLIAEQWVLSAAHCTEGTNGKLFQVLLGAHSLTEPEPHKRLYQVRAQIPHPGSNIHNNKDDLLLLQLEEKAELNAHVKVLPFQREDRDVEADTVCEAAGWGTVTHSGRRPDKLQQVERPVISRDLCNHRTRHDHTITEKMMCTDSRKKDTCKVPAS
SIO_010081: LOC118179128
subclass of: SO_0000673
so part of: LOC118179128
location: join(454896..454962,455358..455511,455743..455887,456235..456507)
location: region:454896-456507:1
so has part: feature:454896-454962:1:exon
so has part: feature:455358-455511:1:exon
so has part: feature:455743-455887:1:exon
so has part: feature:456235-456507:1:exon

XP_035204112.1
type: Protein
SIO_000068: ncbiprotein

position:456507:1
position: 456507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454896-454962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455358-455511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455743-455887:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456235-456507:1:exon

MED16
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MED16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(458910..467810)
location: region:458910-467810:-1
so has part: feature:458910-467810:-1:exon
subclass of: SO_0000010

118179125
type: Gene
SIO_000068: ncbigene

position:458910:-1
position: 458910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467810:-1
position: 467810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458910-467810:-1:exon

MED16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MED16
product: mediator complex subunit 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_035348216.1
SIO_010081: MED16
subclass of: SO_0000673
so part of: MED16
location: complement(join(458910..459722,460823..460906,461282..461498,461754..461946,462136..462269,462484..462694,463104..463310,463558..463769,463902..464057,464685..464790,465649..466080,466916..467085,467241..467348,467565..467809))
location: region:458910-467809:-1
so has part: feature:467565-467809:-1:exon
so has part: feature:467241-467348:-1:exon
so has part: feature:466916-467085:-1:exon
so has part: feature:465649-466080:-1:exon
so has part: feature:464685-464790:-1:exon
so has part: feature:463902-464057:-1:exon
so has part: feature:463558-463769:-1:exon
so has part: feature:463104-463310:-1:exon
so has part: feature:462484-462694:-1:exon
so has part: feature:462136-462269:-1:exon
so has part: feature:461754-461946:-1:exon
so has part: feature:461282-461498:-1:exon
so has part: feature:460823-460906:-1:exon
so has part: feature:458910-459722:-1:exon

position:467809:-1
position: 467809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467565-467809:-1:exon

position:467565:-1
position: 467565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467241-467348:-1:exon

position:467241:-1
position: 467241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467348:-1
position: 467348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:466916-467085:-1:exon

position:466916:-1
position: 466916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467085:-1
position: 467085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:465649-466080:-1:exon

position:465649:-1
position: 465649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466080:-1
position: 466080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:464685-464790:-1:exon

position:464685:-1
position: 464685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464790:-1
position: 464790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:463902-464057:-1:exon

position:463902:-1
position: 463902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464057:-1
position: 464057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:463558-463769:-1:exon

position:463558:-1
position: 463558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463769:-1
position: 463769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:463104-463310:-1:exon

position:463104:-1
position: 463104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463310:-1
position: 463310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:462484-462694:-1:exon

position:462484:-1
position: 462484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462694:-1
position: 462694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:462136-462269:-1:exon

position:462136:-1
position: 462136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462269:-1
position: 462269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:461754-461946:-1:exon

position:461754:-1
position: 461754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461946:-1
position: 461946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:461282-461498:-1:exon

position:461282:-1
position: 461282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461498:-1
position: 461498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:460823-460906:-1:exon

position:460823:-1
position: 460823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460906:-1
position: 460906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:458910-459722:-1:exon

position:459722:-1
position: 459722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MED16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 16 isoform X1
translation: MDLAYVCEWERRPKSNHCPSIPLVCAWSCRNLIAFTTDLRNEEEKDLTHMVHIIDTEHPWDVYSVNSGHAEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPVVALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVSLLKPNGQVLTSTESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNEKCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVANDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYGSSSQRPVDEQTIKRQRTAGPLVHFKAMQLSWTSLALAGIDSHGKLSMLRISPSMGHVLDMNTSLRHLLFLLEYCMVTGYDWWDILLHVQPNMVQNLVEKLHEEYMRQSAALQQVLSTRIVAMKASLCKLSSSTLARVCDYHAKLFLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTLQSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDTLIDECCLLPSQLLIPNIDWLPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHLGAYPTEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRRMPLSYS
SIO_010081: MED16
subclass of: SO_0000673
so part of: MED16
location: complement(join(459596..459722,460823..460906,461282..461498,461754..461946,462136..462269,462484..462694,463104..463310,463558..463769,463902..464057,464685..464790,465649..466080,466916..467085,467241..467348,467565..467700))
location: region:459596-467700:-1
so has part: feature:467565-467700:-1:exon
so has part: feature:467241-467348:-1:exon
so has part: feature:466916-467085:-1:exon
so has part: feature:465649-466080:-1:exon
so has part: feature:464685-464790:-1:exon
so has part: feature:463902-464057:-1:exon
so has part: feature:463558-463769:-1:exon
so has part: feature:463104-463310:-1:exon
so has part: feature:462484-462694:-1:exon
so has part: feature:462136-462269:-1:exon
so has part: feature:461754-461946:-1:exon
so has part: feature:461282-461498:-1:exon
so has part: feature:460823-460906:-1:exon
so has part: feature:459596-459722:-1:exon

XP_035204107.1
type: Protein
SIO_000068: ncbiprotein

position:459596:-1
position: 459596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467700:-1
position: 467700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467565-467700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467241-467348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466916-467085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465649-466080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464685-464790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463902-464057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463558-463769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463104-463310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462484-462694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462136-462269:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461754-461946:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461282-461498:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460823-460906:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459596-459722:-1:exon

MED16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MED16
product: mediator complex subunit 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_035348217.1
SIO_010081: MED16
subclass of: SO_0000673
so part of: MED16
location: complement(join(460926..461220,461261..461498,461754..461946,462136..462269,462484..462694,463104..463310,463558..463769,463902..464057,464685..464790,465649..466080,466916..467085,467241..467348,467565..467810))
location: region:460926-467810:-1
so has part: feature:467565-467810:-1:exon
so has part: feature:467241-467348:-1:exon
so has part: feature:466916-467085:-1:exon
so has part: feature:465649-466080:-1:exon
so has part: feature:464685-464790:-1:exon
so has part: feature:463902-464057:-1:exon
so has part: feature:463558-463769:-1:exon
so has part: feature:463104-463310:-1:exon
so has part: feature:462484-462694:-1:exon
so has part: feature:462136-462269:-1:exon
so has part: feature:461754-461946:-1:exon
so has part: feature:461261-461498:-1:exon
so has part: feature:460926-461220:-1:exon

position:460926:-1
position: 460926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467565-467810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467241-467348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466916-467085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465649-466080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464685-464790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463902-464057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463558-463769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463104-463310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462484-462694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462136-462269:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461754-461946:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461261-461498:-1:exon

position:461261:-1
position: 461261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:460926-461220:-1:exon

position:461220:-1
position: 461220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MED16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 16 isoform X2
translation: MDLAYVCEWERRPKSNHCPSIPLVCAWSCRNLIAFTTDLRNEEEKDLTHMVHIIDTEHPWDVYSVNSGHAEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPVVALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVSLLKPNGQVLTSTESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNEKCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVANDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYGSSSQRPVDEQTIKRQRTAGPLVHFKAMQLSWTSLALAGIDSHGKLSMLRISPSMGHVLDMNTSLRHLLFLLEYCMVTGYDWWDILLHVQPNMVQNLVEKLHEEYMRQSAALQQVLSTRIVAMKASLCKLSSSTLARVCDYHAKLFLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTLQSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDTLIDECCLLPSQLLIPNIDWLPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRYRDLKQIFSISERSEDPGHLL
SIO_010081: MED16
subclass of: SO_0000673
so part of: MED16
location: complement(join(461175..461220,461261..461498,461754..461946,462136..462269,462484..462694,463104..463310,463558..463769,463902..464057,464685..464790,465649..466080,466916..467085,467241..467348,467565..467700))
location: region:461175-467700:-1
so has part: feature:467565-467700:-1:exon
so has part: feature:467241-467348:-1:exon
so has part: feature:466916-467085:-1:exon
so has part: feature:465649-466080:-1:exon
so has part: feature:464685-464790:-1:exon
so has part: feature:463902-464057:-1:exon
so has part: feature:463558-463769:-1:exon
so has part: feature:463104-463310:-1:exon
so has part: feature:462484-462694:-1:exon
so has part: feature:462136-462269:-1:exon
so has part: feature:461754-461946:-1:exon
so has part: feature:461261-461498:-1:exon
so has part: feature:461175-461220:-1:exon

XP_035204108.1
type: Protein
SIO_000068: ncbiprotein

position:461175:-1
position: 461175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467565-467700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467241-467348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466916-467085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465649-466080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464685-464790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463902-464057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463558-463769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463104-463310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462484-462694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462136-462269:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461754-461946:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:461261-461498:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:461175-461220:-1:exon

LOC118155432
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155432
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 468118..468224
location: region:468118-468224:1
so has part: feature:468118-468224:1:exon
subclass of: SO_0000623

118155432
type: Gene
SIO_000068: ncbigene

position:468118:1
position: 468118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468224:1
position: 468224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468118-468224:1:exon

LOC118155432
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: snRNA
gene: LOC118155432
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004745884.1
SIO_010081: LOC118155432
subclass of: SO_0000673
so part of: LOC118155432
location: 468118..468224
location: region:468118-468224:1
so has part: feature:468118-468224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468118-468224:1:exon

R3HDM4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: R3HDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(468696..473351)
location: region:468696-473351:-1
so has part: feature:468696-473351:-1:exon
subclass of: SO_0000010

118179129
type: Gene
SIO_000068: ncbigene

position:468696:-1
position: 468696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473351:-1
position: 473351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468696-473351:-1:exon

R3HDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: R3HDM4
product: R3H domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035348223.1
SIO_010081: R3HDM4
subclass of: SO_0000673
so part of: R3HDM4
location: complement(join(468696..469071,469598..469653,469856..469941,470997..471082,471369..471492,472057..472175,472252..472406,473177..473351))
location: region:468696-473351:-1
so has part: feature:473177-473351:-1:exon
so has part: feature:472252-472406:-1:exon
so has part: feature:472057-472175:-1:exon
so has part: feature:471369-471492:-1:exon
so has part: feature:470997-471082:-1:exon
so has part: feature:469856-469941:-1:exon
so has part: feature:469598-469653:-1:exon
so has part: feature:468696-469071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473177-473351:-1:exon

position:473177:-1
position: 473177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:472252-472406:-1:exon

position:472252:-1
position: 472252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472406:-1
position: 472406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:472057-472175:-1:exon

position:472057:-1
position: 472057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472175:-1
position: 472175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:471369-471492:-1:exon

position:471369:-1
position: 471369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471492:-1
position: 471492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:470997-471082:-1:exon

position:470997:-1
position: 470997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471082:-1
position: 471082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:469856-469941:-1:exon

position:469856:-1
position: 469856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469941:-1
position: 469941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:469598-469653:-1:exon

position:469598:-1
position: 469598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469653:-1
position: 469653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:468696-469071:-1:exon

position:469071:-1
position: 469071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

R3HDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: R3HDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 4
translation: MVLLPGGAAGRGPAEPLPRIEDCLPPLESSPSKRFSPSKRKQYYINKAVRNSDLIPKAKGRKSLQRLENTRYLMTLLERDECGSDEAELAPAATPGIFAEACNNETYVEIWNDFMNRSGEEQERVLLYLEEEARKKHERKLPVKNTEKWKEHPAYTPKECFQRISRRLRSTLKRGRIPMGMLEGLEEELLAFFSVTPHSVYTALMDNSFERLLLHALCQYMDLVSASSDIEGKRQMKVSNKHRVFLPPQLLLSDYLGQMS
SIO_010081: R3HDM4
subclass of: SO_0000673
so part of: R3HDM4
location: complement(join(468968..469071,469598..469653,469856..469941,470997..471082,471369..471492,472057..472175,472252..472406,473177..473229))
location: region:468968-473229:-1
so has part: feature:473177-473229:-1:exon
so has part: feature:472252-472406:-1:exon
so has part: feature:472057-472175:-1:exon
so has part: feature:471369-471492:-1:exon
so has part: feature:470997-471082:-1:exon
so has part: feature:469856-469941:-1:exon
so has part: feature:469598-469653:-1:exon
so has part: feature:468968-469071:-1:exon

XP_035204114.1
type: Protein
SIO_000068: ncbiprotein

position:468968:-1
position: 468968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473229:-1
position: 473229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473177-473229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472252-472406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472057-472175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471369-471492:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470997-471082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469856-469941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469598-469653:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:468968-469071:-1:exon

ARID3A
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ARID3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 473758..498649
location: region:473758-498649:1
so has part: feature:473758-498649:1:exon
subclass of: SO_0000010

118179127
type: Gene
SIO_000068: ncbigene

position:473758:1
position: 473758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498649:1
position: 498649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473758-498649:1:exon

ARID3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARID3A
product: AT-rich interaction domain 3A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_035348219.1
SIO_010081: ARID3A
subclass of: SO_0000673
so part of: ARID3A
location: join(473758..473873,475459..476370,477004..477337,494916..494988,496438..496621,496704..496951,497460..497756,497849..497938,498058..498649)
location: region:473758-498649:1
so has part: feature:473758-473873:1:exon
so has part: feature:475459-476370:1:exon
so has part: feature:477004-477337:1:exon
so has part: feature:494916-494988:1:exon
so has part: feature:496438-496621:1:exon
so has part: feature:496704-496951:1:exon
so has part: feature:497460-497756:1:exon
so has part: feature:497849-497938:1:exon
so has part: feature:498058-498649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473758-473873:1:exon

position:473873:1
position: 473873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475459-476370:1:exon

position:475459:1
position: 475459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476370:1
position: 476370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:477004-477337:1:exon

position:477004:1
position: 477004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477337:1
position: 477337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:494916-494988:1:exon

position:494916:1
position: 494916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494988:1
position: 494988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:496438-496621:1:exon

position:496438:1
position: 496438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496621:1
position: 496621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:496704-496951:1:exon

position:496704:1
position: 496704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496951:1
position: 496951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:497460-497756:1:exon

position:497460:1
position: 497460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497756:1
position: 497756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:497849-497938:1:exon

position:497849:1
position: 497849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497938:1
position: 497938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498058-498649:1:exon

position:498058:1
position: 498058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARID3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARID3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 3A
translation: MKLQAVMENLQRQQRARLQQALEARQQEQQQQQQRSTPPPAQPPPAPGQTPARGRGPEPAPAPSEEGAEPENAHIQRAQMAALAAMRAAAAGLSHSSSPGLSEESQASEEEERGEEEEEEEDGGYQQEMGSEEEEDLKGKWDEEDFEEDLGEEEEEEEEEEEEEEEDDYEEEEDMGEEGLSSAEAVRTGPGSLLLRKPPVPQHCRGEAQRPPGGQERLPAGLGPQGHAQLPQPAPDHGDWTYEEQFKQLYELDGDPRRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYMLYMLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQGFGSSLFTYSPGGTHGLLSSPKLPVPALGLASATNGGSIAPVQKIKKEEDAPIPISMPSRLPVSLAGHPVVAAQAAAVQVAAAAQAVALEQLREKLESGEPPEKKMALVTDEQQRLMQRALQQNLLAMTAQLPMSIRINSQGTRSPENRQDSSGSLSSNGTNSISMSVEINGIVYTGVLFAQTPGPSSSSSSSSSSAYSKGNGGNGGGSRSSGNGGGGAGGGGGSVPPAAPAALAVPPPSSTSNNASP
SIO_010081: ARID3A
subclass of: SO_0000673
so part of: ARID3A
location: join(475961..476370,477004..477337,494916..494988,496438..496621,496704..496951,497460..497756,497849..497938,498058..498275)
location: region:475961-498275:1
so has part: feature:475961-476370:1:exon
so has part: feature:477004-477337:1:exon
so has part: feature:494916-494988:1:exon
so has part: feature:496438-496621:1:exon
so has part: feature:496704-496951:1:exon
so has part: feature:497460-497756:1:exon
so has part: feature:497849-497938:1:exon
so has part: feature:498058-498275:1:exon

XP_035204110.1
type: Protein
SIO_000068: ncbiprotein

position:475961:1
position: 475961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498275:1
position: 498275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475961-476370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477004-477337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:494916-494988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496438-496621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496704-496951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497460-497756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497849-497938:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498058-498275:1:exon

WDR18
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: WDR18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 501544..513543
location: region:501544-513543:1
so has part: feature:501544-513543:1:exon
subclass of: SO_0000010

118179263
type: Gene
SIO_000068: ncbigene

position:501544:1
position: 501544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513543:1
position: 513543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501544-513543:1:exon

WDR18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: WDR18
product: WD repeat domain 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_035348442.1
SIO_010081: WDR18
subclass of: SO_0000673
so part of: WDR18
location: join(501544..501753,503234..503344,505622..505755,506307..506448,507105..507248,507427..507491,507610..507734,510709..510875,512158..512226,512513..513543)
location: region:501544-513543:1
so has part: feature:501544-501753:1:exon
so has part: feature:503234-503344:1:exon
so has part: feature:505622-505755:1:exon
so has part: feature:506307-506448:1:exon
so has part: feature:507105-507248:1:exon
so has part: feature:507427-507491:1:exon
so has part: feature:507610-507734:1:exon
so has part: feature:510709-510875:1:exon
so has part: feature:512158-512226:1:exon
so has part: feature:512513-513543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501544-501753:1:exon

position:501753:1
position: 501753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503234-503344:1:exon

position:503234:1
position: 503234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503344:1
position: 503344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505622-505755:1:exon

position:505622:1
position: 505622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505755:1
position: 505755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:506307-506448:1:exon

position:506307:1
position: 506307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506448:1
position: 506448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:507105-507248:1:exon

position:507105:1
position: 507105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507248:1
position: 507248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:507427-507491:1:exon

position:507427:1
position: 507427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507491:1
position: 507491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:507610-507734:1:exon

position:507610:1
position: 507610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507734:1
position: 507734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:510709-510875:1:exon

position:510709:1
position: 510709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510875:1
position: 510875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:512158-512226:1:exon

position:512158:1
position: 512158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512226:1
position: 512226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:512513-513543:1:exon

position:512513:1
position: 512513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: WDR18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 18
translation: MAAPMEVALVSDAAGPLCNCSVWELHSGSALPGYRGGNSGPRGLALLGGEHLLGAQLGKSYINVWELQRKDQLQQKIICPGPVTCLTASPNGLYILAGVAESIYLWEVSNGNLLAILNRHYQDLTCLCFTDDSSHFLSGAKDCLALVWNLYSVLQAEPSQIPDPRHVWSRHSLPITDMCCGFGGPLARAATASLDQTAKLWEVSSGELLLSVLFDVGIMAVTLDLSEYHMFCGGMDGSIFQVDLCAWPVQRDRTFQTERENGKIFKGHRNQVTCLSVSTDGSLLLSGSHDETVRLWDIQSKQCLKTMNHKGPVTNAFIVLAPANMFNPDGKPSVPLPKFSKHLYGTESTDEQGSEGVTLRLGLHQQDCGESYLEKGEKMYSQMCSTREKNLVGDQEHLTIQVSELEEEVSTLRKINKNLFDFSARIITKPAK
SIO_010081: WDR18
subclass of: SO_0000673
so part of: WDR18
location: join(501544..501753,503234..503344,505622..505755,506307..506448,507105..507248,507427..507491,507610..507734,510709..510875,512158..512226,512513..512644)
location: region:501544-512644:1
so has part: feature:501544-501753:1:exon
so has part: feature:503234-503344:1:exon
so has part: feature:505622-505755:1:exon
so has part: feature:506307-506448:1:exon
so has part: feature:507105-507248:1:exon
so has part: feature:507427-507491:1:exon
so has part: feature:507610-507734:1:exon
so has part: feature:510709-510875:1:exon
so has part: feature:512158-512226:1:exon
so has part: feature:512513-512644:1:exon

XP_035204333.1
type: Protein
SIO_000068: ncbiprotein

position:512644:1
position: 512644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501544-501753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503234-503344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505622-505755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506307-506448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507105-507248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507427-507491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507610-507734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:510709-510875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512158-512226:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:512513-512644:1:exon

GRIN3B
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: GRIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <515201..520962
location: region:515201-520962:1
so has part: feature:515201-520962:1:exon
subclass of: SO_0000010

118155411
type: Gene
SIO_000068: ncbigene

position:515201:1
position: 515201
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:520962:1
position: 520962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515201-520962:1:exon

GRIN3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GRIN3B
product: glutamate ionotropic receptor NMDA type subunit 3B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035308677.1
SIO_010081: GRIN3B
subclass of: SO_0000673
so part of: GRIN3B
location: join(<515201..515458,516801..517399,517783..518833,518958..519103,519223..519338,519480..519631,519713..519877,519999..520066,520174..520467,520926..520962)
location: region:515201-520962:1
so has part: feature:515201-515458:1:exon
so has part: feature:516801-517399:1:exon
so has part: feature:517783-518833:1:exon
so has part: feature:518958-519103:1:exon
so has part: feature:519223-519338:1:exon
so has part: feature:519480-519631:1:exon
so has part: feature:519713-519877:1:exon
so has part: feature:519999-520066:1:exon
so has part: feature:520174-520467:1:exon
so has part: feature:520926-520962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515201-515458:1:exon

position:515458:1
position: 515458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516801-517399:1:exon

position:516801:1
position: 516801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517399:1
position: 517399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517783-518833:1:exon

position:517783:1
position: 517783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518833:1
position: 518833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518958-519103:1:exon

position:518958:1
position: 518958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519103:1
position: 519103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:519223-519338:1:exon

position:519223:1
position: 519223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519338:1
position: 519338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519480-519631:1:exon

position:519480:1
position: 519480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519631:1
position: 519631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:519713-519877:1:exon

position:519713:1
position: 519713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519877:1
position: 519877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:519999-520066:1:exon

position:519999:1
position: 519999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520066:1
position: 520066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:520174-520467:1:exon

position:520174:1
position: 520174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520467:1
position: 520467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:520926-520962:1:exon

position:520926:1
position: 520926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIN3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GRIN3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, NMDA 3B
translation: GPGGPGGAALPHNRSLELVAGAPAARDPGSLARWLCGALGGRGVAAVLAVPRSRRELLQLDFLAAALRVPFVSVLDTRGPLPFRPQSPFHFHMDRQSSLETLVEVLASILQANDWHETSLVLCHPWDVSGFLDLWARRTQLLLRAVLDLGYLDEPRASRYLRQRGERLKALSSPVLVLGCDLRRARLLFRVVEQSGLLLQEFHWILGSPLRAGELQTEGLPLGLLAFGEVGRPPLEPFLQDAVELVSRAIASAAAVHPDLALVPSVVNCNDRLREGAESSGQFLSRFMSNTSFHGRTGHVQVQNGTRVQTEHQYRVWSLLRDSLGQPTWVTMGAWRHGKLELEEGAWQSHLQRKSLAEGAGGARAKLRVVTLVEHPFVFTREVDEDGSCLAGQLCLDPGTNDSAVLDALFEELGAGNGSVPREYKKCCYGYCIDLLEKLAEDVPFDFELYIVGDGKYGAWKNGRWTGLVGDLLSGTAHMAVTSFSINSARSKVIDFTSPFFSTSLGILVRTKDTASPIGAFMWPLHWTMWVGIFVALHTTALFLTLYEWKSPYGMTPHGRNRMKIFSYSSALNLCYAILFGRTVSSKTPKCCTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEEYIKKSFPEMHEHMRRYNVPTTPAGVTMLKTEPPKLNAFIMDKSLLDYEVSIDSDCKLLTVGKPFAIEGYGIGLPQNSPLTSNLSEFISRYKSAGFIDLLHDKWYKMVPCGKRVFAVTETLQMGIYHFSGLFVLLCIGLSGSLLTSLGEHVFYRLVLPRIKRKKKFNYWLHTSQKIHRALNTGVEEQKGQKLSLAERCDPQQSPGVQPWPRLRQEGRRVRFQLDAAAPEGEGTPGPRGNGPVQGAGAELQELEEKIEAMREQLRAALVRKSELVAAMGTARSSQAPALERPREERQAPAPPQESSE
SIO_010081: GRIN3B
subclass of: SO_0000673
so part of: GRIN3B
location: join(<515201..515458,516801..517399,517783..518833,518958..519103,519223..519338,519480..519631,519713..519877,519999..520066,520174..520467,520926..520962)
location: region:515201-520962:1
so has part: feature:515201-515458:1:exon
so has part: feature:516801-517399:1:exon
so has part: feature:517783-518833:1:exon
so has part: feature:518958-519103:1:exon
so has part: feature:519223-519338:1:exon
so has part: feature:519480-519631:1:exon
so has part: feature:519713-519877:1:exon
so has part: feature:519999-520066:1:exon
so has part: feature:520174-520467:1:exon
so has part: feature:520926-520962:1:exon

XP_035164568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515201-515458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516801-517399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517783-518833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518958-519103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519223-519338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519480-519631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519713-519877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519999-520066:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:520174-520467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:520926-520962:1:exon

TMEM259
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(522348..535543)
location: region:522348-535543:-1
so has part: feature:522348-535543:-1:exon
subclass of: SO_0000010

118179160
type: Gene
SIO_000068: ncbigene

position:522348:-1
position: 522348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535543:-1
position: 535543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522348-535543:-1:exon

TMEM259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMEM259
product: transmembrane protein 259, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_035348286.1
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: complement(join(522348..524041,524887..524986,525381..525513,526002..526085,526400..526457,527372..527472,527812..527934,528862..528972,531144..531258,531571..531837,535089..535543))
location: region:522348-535543:-1
so has part: feature:535089-535543:-1:exon
so has part: feature:531571-531837:-1:exon
so has part: feature:531144-531258:-1:exon
so has part: feature:528862-528972:-1:exon
so has part: feature:527812-527934:-1:exon
so has part: feature:527372-527472:-1:exon
so has part: feature:526400-526457:-1:exon
so has part: feature:526002-526085:-1:exon
so has part: feature:525381-525513:-1:exon
so has part: feature:524887-524986:-1:exon
so has part: feature:522348-524041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535089-535543:-1:exon

position:535089:-1
position: 535089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531571-531837:-1:exon

position:531571:-1
position: 531571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531837:-1
position: 531837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531144-531258:-1:exon

position:531144:-1
position: 531144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531258:-1
position: 531258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528862-528972:-1:exon

position:528862:-1
position: 528862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528972:-1
position: 528972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:527812-527934:-1:exon

position:527812:-1
position: 527812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527934:-1
position: 527934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:527372-527472:-1:exon

position:527372:-1
position: 527372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527472:-1
position: 527472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:526400-526457:-1:exon

position:526400:-1
position: 526400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526457:-1
position: 526457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:526002-526085:-1:exon

position:526002:-1
position: 526002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526085:-1
position: 526085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525381-525513:-1:exon

position:525381:-1
position: 525381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525513:-1
position: 525513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:524887-524986:-1:exon

position:524887:-1
position: 524887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524986:-1
position: 524986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:522348-524041:-1:exon

position:524041:-1
position: 524041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMEM259
product: transmembrane protein 259, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_035348285.1
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: complement(join(522348..524041,524887..524986,525381..525513,526002..526085,526400..526457,527372..527472,527812..527934,528862..528972,531090..531258,531571..531837,535089..535543))
location: region:522348-535543:-1
so has part: feature:535089-535543:-1:exon
so has part: feature:531571-531837:-1:exon
so has part: feature:531090-531258:-1:exon
so has part: feature:528862-528972:-1:exon
so has part: feature:527812-527934:-1:exon
so has part: feature:527372-527472:-1:exon
so has part: feature:526400-526457:-1:exon
so has part: feature:526002-526085:-1:exon
so has part: feature:525381-525513:-1:exon
so has part: feature:524887-524986:-1:exon
so has part: feature:522348-524041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535089-535543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531571-531837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531090-531258:-1:exon

position:531090:-1
position: 531090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528862-528972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527812-527934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527372-527472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526400-526457:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:526002-526085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525381-525513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524887-524986:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522348-524041:-1:exon

TMEM259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membralin isoform X2
translation: MSENNQPHAAHQHPATHGGAAGGNGRGVRNPNGNQNPLINVRDRLFHALFFKMAVTYARLFPPAFRRVFEFFVLLKALFVLFILAYIHIAFSRSPINCLEHVRDKWPRDGILRVEIQRNSSRAPIFLQFCGVEKFPGMVAEPTAEEEEEEEEEMTVDMFENSSIKFELDIEPKVFLKPSRVSSTEALSHNESQEFSFSEAAPKVWPQEEYIVEYSLEYGFLRLSQSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYRFVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQNQQVGQGTQTTLQDNLNNNTTAAPVEVGSRRPHLAAGPSGESSGPAALTPSEASSVIAAATAASVGSDLNWVAETAAIVTEASFLSDLSSTLLEPNVVHEAMASGSPQDAAASSLVARIRVSSDHPETAVGSITIEVTSTAVVAAADVPPATEAAAAAPPGLAQEDGASVPSPSPPEQTEAVRGSDSQAKPSGKNCAAASGGAETPPATGENSDQDKRSGRALGDRGESSPCPAPADSTASSGPCSEPDSRSLS
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: complement(join(523196..524041,524887..524986,525381..525513,526002..526085,526400..526457,527372..527472,527812..527934,528862..528972,531144..531258,531571..531837,535089..535316))
location: region:523196-535316:-1
so has part: feature:535089-535316:-1:exon
so has part: feature:531571-531837:-1:exon
so has part: feature:531144-531258:-1:exon
so has part: feature:528862-528972:-1:exon
so has part: feature:527812-527934:-1:exon
so has part: feature:527372-527472:-1:exon
so has part: feature:526400-526457:-1:exon
so has part: feature:526002-526085:-1:exon
so has part: feature:525381-525513:-1:exon
so has part: feature:524887-524986:-1:exon
so has part: feature:523196-524041:-1:exon

XP_035204177.1
type: Protein
SIO_000068: ncbiprotein

position:523196:-1
position: 523196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535316:-1
position: 535316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535089-535316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531571-531837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531144-531258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528862-528972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527812-527934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527372-527472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526400-526457:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:526002-526085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525381-525513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524887-524986:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523196-524041:-1:exon

TMEM259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMEM259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membralin isoform X1
translation: MSENNQPHAAHQHPATHGGAAGGNGRGVRNPNGNQNPLINVRDRLFHALFFKMAVTYARLFPPAFRRVFEFFVLLKALFVLFILAYIHIAFSRSPINCLEHVRDKWPRDGILRVEIQRNSSRAPIFLQFCGVEKFPGMVAEPTAEEEEEEEEEMTVDMFENSSIKFELDIEPKVFLKPSRVSSTEALSHNESQEFSFSEAAPKGMQPLRETVSEFEMLTRAVWPQEEYIVEYSLEYGFLRLSQSTRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYRFVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQNQQVGQGTQTTLQDNLNNNTTAAPVEVGSRRPHLAAGPSGESSGPAALTPSEASSVIAAATAASVGSDLNWVAETAAIVTEASFLSDLSSTLLEPNVVHEAMASGSPQDAAASSLVARIRVSSDHPETAVGSITIEVTSTAVVAAADVPPATEAAAAAPPGLAQEDGASVPSPSPPEQTEAVRGSDSQAKPSGKNCAAASGGAETPPATGENSDQDKRSGRALGDRGESSPCPAPADSTASSGPCSEPDSRSLS
SIO_010081: TMEM259
subclass of: SO_0000673
so part of: TMEM259
location: complement(join(523196..524041,524887..524986,525381..525513,526002..526085,526400..526457,527372..527472,527812..527934,528862..528972,531090..531258,531571..531837,535089..535316))
location: region:523196-535316:-1
so has part: feature:535089-535316:-1:exon
so has part: feature:531571-531837:-1:exon
so has part: feature:531090-531258:-1:exon
so has part: feature:528862-528972:-1:exon
so has part: feature:527812-527934:-1:exon
so has part: feature:527372-527472:-1:exon
so has part: feature:526400-526457:-1:exon
so has part: feature:526002-526085:-1:exon
so has part: feature:525381-525513:-1:exon
so has part: feature:524887-524986:-1:exon
so has part: feature:523196-524041:-1:exon

XP_035204176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535089-535316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531571-531837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531090-531258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528862-528972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527812-527934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527372-527472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526400-526457:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:526002-526085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525381-525513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524887-524986:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523196-524041:-1:exon

LOC118155433
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118155433
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 535886..535992
location: region:535886-535992:1
so has part: feature:535886-535992:1:exon
subclass of: SO_0000623

118155433
type: Gene
SIO_000068: ncbigene

position:535886:1
position: 535886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535992:1
position: 535992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535886-535992:1:exon

LOC118155433
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: snRNA
gene: LOC118155433
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004745885.1
SIO_010081: LOC118155433
subclass of: SO_0000673
so part of: LOC118155433
location: 535886..535992
location: region:535886-535992:1
so has part: feature:535886-535992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535886-535992:1:exon

ABCA7
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ABCA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(536159..548930)
location: region:536159-548930:-1
so has part: feature:536159-548930:-1:exon
subclass of: SO_0000010

118179054
type: Gene
SIO_000068: ncbigene

position:536159:-1
position: 536159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548930:-1
position: 548930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536159-548930:-1:exon

ABCA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ABCA7
product: ATP binding cassette subfamily A member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035348084.1
SIO_010081: ABCA7
subclass of: SO_0000673
so part of: ABCA7
location: complement(join(536159..536413,536483..536726,536803..536895,536973..537076,537156..537290,537360..537549,537720..537826,537894..537956,538100..538220,538292..538421,538527..538650,538734..538878,539006..539121,539223..539400,539467..539636,539817..539891,539979..540084,540177..540209,540516..540610,540688..540883,540986..541084,541154..541278,541352..541503,541911..541991,542176..542224,542352..542554,542717..542789,542899..543101,543286..543423,543509..543648,543714..543845,544017..544188,544302..544418,544518..544722,544837..545058,545152..545374,545488..545660,545766..545978,546046..546225,546310..546426,546493..546632,546730..546955,547039..547119,547201..547395,547466..547715,547795..547936,548050..548143,548240..548328,548731..548930))
location: region:536159-548930:-1
so has part: feature:548731-548930:-1:exon
so has part: feature:548240-548328:-1:exon
so has part: feature:548050-548143:-1:exon
so has part: feature:547795-547936:-1:exon
so has part: feature:547466-547715:-1:exon
so has part: feature:547201-547395:-1:exon
so has part: feature:547039-547119:-1:exon
so has part: feature:546730-546955:-1:exon
so has part: feature:546493-546632:-1:exon
so has part: feature:546310-546426:-1:exon
so has part: feature:546046-546225:-1:exon
so has part: feature:545766-545978:-1:exon
so has part: feature:545488-545660:-1:exon
so has part: feature:545152-545374:-1:exon
so has part: feature:544837-545058:-1:exon
so has part: feature:544518-544722:-1:exon
so has part: feature:544302-544418:-1:exon
so has part: feature:544017-544188:-1:exon
so has part: feature:543714-543845:-1:exon
so has part: feature:543509-543648:-1:exon
so has part: feature:543286-543423:-1:exon
so has part: feature:542899-543101:-1:exon
so has part: feature:542717-542789:-1:exon
so has part: feature:542352-542554:-1:exon
so has part: feature:542176-542224:-1:exon
so has part: feature:541911-541991:-1:exon
so has part: feature:541352-541503:-1:exon
so has part: feature:541154-541278:-1:exon
so has part: feature:540986-541084:-1:exon
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so has part: feature:539979-540084:-1:exon
so has part: feature:539817-539891:-1:exon
so has part: feature:539467-539636:-1:exon
so has part: feature:539223-539400:-1:exon
so has part: feature:539006-539121:-1:exon
so has part: feature:538734-538878:-1:exon
so has part: feature:538527-538650:-1:exon
so has part: feature:538292-538421:-1:exon
so has part: feature:538100-538220:-1:exon
so has part: feature:537894-537956:-1:exon
so has part: feature:537720-537826:-1:exon
so has part: feature:537360-537549:-1:exon
so has part: feature:537156-537290:-1:exon
so has part: feature:536973-537076:-1:exon
so has part: feature:536803-536895:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:548731-548930:-1:exon

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urn:…
SIO_000300: 2
SIO_000628: feature:548240-548328:-1:exon

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urn:…
SIO_000300: 3
SIO_000628: feature:548050-548143:-1:exon

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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:547795-547936:-1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:547466-547715:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:547201-547395:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:547039-547119:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:546730-546955:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:546493-546632:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:546310-546426:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:546046-546225:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:545766-545978:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:545488-545660:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:545152-545374:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:544837-545058:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:544518-544722:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:544302-544418:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:544017-544188:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:543714-543845:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:543509-543648:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:543286-543423:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:542899-543101:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:542717-542789:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:542352-542554:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:542176-542224:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:541911-541991:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:541352-541503:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:541154-541278:-1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:540986-541084:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:540688-540883:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:540516-540610:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:540177-540209:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:539979-540084:-1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:539817-539891:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:539467-539636:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:539223-539400:-1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:539006-539121:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:538734-538878:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:538527-538650:-1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:538292-538421:-1:exon

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urn:…
SIO_000300: 41
SIO_000628: feature:538100-538220:-1:exon

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position:538220:-1
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urn:…
SIO_000300: 42
SIO_000628: feature:537894-537956:-1:exon

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urn:…
SIO_000300: 43
SIO_000628: feature:537720-537826:-1:exon

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urn:…
SIO_000300: 44
SIO_000628: feature:537360-537549:-1:exon

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urn:…
SIO_000300: 45
SIO_000628: feature:537156-537290:-1:exon

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urn:…
SIO_000300: 46
SIO_000628: feature:536973-537076:-1:exon

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urn:…
SIO_000300: 47
SIO_000628: feature:536803-536895:-1:exon

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position:536895:-1
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urn:…
SIO_000300: 48
SIO_000628: feature:536483-536726:-1:exon

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reference: sequence
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position:536726:-1
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urn:…
SIO_000300: 49
SIO_000628: feature:536159-536413:-1:exon

position:536413:-1
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reference: sequence
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ABCA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ABCA7
product: ATP binding cassette subfamily A member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035348083.1
SIO_010081: ABCA7
subclass of: SO_0000673
so part of: ABCA7
location: complement(join(536159..536413,536483..536726,536803..536895,536973..537076,537156..537290,537360..537549,537720..537826,537894..537956,538100..538220,538292..538421,538527..538650,538734..538878,539006..539121,539223..539400,539467..539636,539817..539891,539979..540084,540177..540209,540516..540610,540688..540883,540986..541084,541154..541278,541352..541503,541641..541658,541911..541991,542176..542224,542352..542554,542717..542789,542899..543101,543286..543423,543509..543648,543714..543845,544017..544188,544302..544418,544518..544722,544837..545058,545152..545374,545488..545660,545766..545978,546046..546225,546310..546426,546493..546632,546730..546955,547039..547119,547201..547395,547466..547715,547795..547936,548050..548143,548240..548328,548731..548930))
location: region:536159-548930:-1
so has part: feature:548731-548930:-1:exon
so has part: feature:548240-548328:-1:exon
so has part: feature:548050-548143:-1:exon
so has part: feature:547795-547936:-1:exon
so has part: feature:547466-547715:-1:exon
so has part: feature:547201-547395:-1:exon
so has part: feature:547039-547119:-1:exon
so has part: feature:546730-546955:-1:exon
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so has part: feature:546310-546426:-1:exon
so has part: feature:546046-546225:-1:exon
so has part: feature:545766-545978:-1:exon
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so has part: feature:545152-545374:-1:exon
so has part: feature:544837-545058:-1:exon
so has part: feature:544518-544722:-1:exon
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so has part: feature:544017-544188:-1:exon
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so has part: feature:543509-543648:-1:exon
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so has part: feature:542899-543101:-1:exon
so has part: feature:542717-542789:-1:exon
so has part: feature:542352-542554:-1:exon
so has part: feature:542176-542224:-1:exon
so has part: feature:541911-541991:-1:exon
so has part: feature:541641-541658:-1:exon
so has part: feature:541352-541503:-1:exon
so has part: feature:541154-541278:-1:exon
so has part: feature:540986-541084:-1:exon
so has part: feature:540688-540883:-1:exon
so has part: feature:540516-540610:-1:exon
so has part: feature:540177-540209:-1:exon
so has part: feature:539979-540084:-1:exon
so has part: feature:539817-539891:-1:exon
so has part: feature:539467-539636:-1:exon
so has part: feature:539223-539400:-1:exon
so has part: feature:539006-539121:-1:exon
so has part: feature:538734-538878:-1:exon
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so has part: feature:538292-538421:-1:exon
so has part: feature:538100-538220:-1:exon
so has part: feature:537894-537956:-1:exon
so has part: feature:537720-537826:-1:exon
so has part: feature:537360-537549:-1:exon
so has part: feature:537156-537290:-1:exon
so has part: feature:536973-537076:-1:exon
so has part: feature:536803-536895:-1:exon
so has part: feature:536483-536726:-1:exon
so has part: feature:536159-536413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548731-548930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548240-548328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548050-548143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547795-547936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547466-547715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:547201-547395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547039-547119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546730-546955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546493-546632:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546310-546426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546046-546225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545766-545978:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545488-545660:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545152-545374:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544837-545058:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544518-544722:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544302-544418:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544017-544188:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543714-543845:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543509-543648:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:543286-543423:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542899-543101:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:542717-542789:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:542352-542554:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:542176-542224:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541911-541991:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541641-541658:-1:exon

position:541641:-1
position: 541641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541658:-1
position: 541658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:541352-541503:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:541154-541278:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:540986-541084:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:540688-540883:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:540516-540610:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:540177-540209:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:539979-540084:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:539817-539891:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:539467-539636:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:539223-539400:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:539006-539121:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:538734-538878:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:538527-538650:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:538292-538421:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:538100-538220:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:537894-537956:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:537720-537826:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:537360-537549:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:537156-537290:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:536973-537076:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:536803-536895:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:536483-536726:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:536159-536413:-1:exon

ABCA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ABCA7
product: ATP binding cassette subfamily A member 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035348085.1
SIO_010081: ABCA7
subclass of: SO_0000673
so part of: ABCA7
location: complement(join(536159..536413,536483..536726,536803..536895,536973..537076,537156..537290,537360..537501,537720..537826,537894..537956,538100..538220,538292..538421,538527..538650,538734..538878,539006..539121,539223..539400,539467..539636,539817..539891,539979..540084,540177..540209,540516..540610,540688..540883,540986..541084,541154..541278,541352..541503,541641..541658,541911..541991,542176..542224,542352..542554,542717..542789,542899..543101,543286..543423,543509..543648,543714..543845,544017..544188,544302..544418,544518..544722,544837..545058,545152..545374,545488..545660,545766..545978,546046..546225,546310..546426,546493..546632,546730..546955,547039..547119,547201..547395,547466..547715,547795..547936,548050..548143,548240..548328,548731..548929))
location: region:536159-548929:-1
so has part: feature:548731-548929:-1:exon
so has part: feature:548240-548328:-1:exon
so has part: feature:548050-548143:-1:exon
so has part: feature:547795-547936:-1:exon
so has part: feature:547466-547715:-1:exon
so has part: feature:547201-547395:-1:exon
so has part: feature:547039-547119:-1:exon
so has part: feature:546730-546955:-1:exon
so has part: feature:546493-546632:-1:exon
so has part: feature:546310-546426:-1:exon
so has part: feature:546046-546225:-1:exon
so has part: feature:545766-545978:-1:exon
so has part: feature:545488-545660:-1:exon
so has part: feature:545152-545374:-1:exon
so has part: feature:544837-545058:-1:exon
so has part: feature:544518-544722:-1:exon
so has part: feature:544302-544418:-1:exon
so has part: feature:544017-544188:-1:exon
so has part: feature:543714-543845:-1:exon
so has part: feature:543509-543648:-1:exon
so has part: feature:543286-543423:-1:exon
so has part: feature:542899-543101:-1:exon
so has part: feature:542717-542789:-1:exon
so has part: feature:542352-542554:-1:exon
so has part: feature:542176-542224:-1:exon
so has part: feature:541911-541991:-1:exon
so has part: feature:541641-541658:-1:exon
so has part: feature:541352-541503:-1:exon
so has part: feature:541154-541278:-1:exon
so has part: feature:540986-541084:-1:exon
so has part: feature:540688-540883:-1:exon
so has part: feature:540516-540610:-1:exon
so has part: feature:540177-540209:-1:exon
so has part: feature:539979-540084:-1:exon
so has part: feature:539817-539891:-1:exon
so has part: feature:539467-539636:-1:exon
so has part: feature:539223-539400:-1:exon
so has part: feature:539006-539121:-1:exon
so has part: feature:538734-538878:-1:exon
so has part: feature:538527-538650:-1:exon
so has part: feature:538292-538421:-1:exon
so has part: feature:538100-538220:-1:exon
so has part: feature:537894-537956:-1:exon
so has part: feature:537720-537826:-1:exon
so has part: feature:537360-537501:-1:exon
so has part: feature:537156-537290:-1:exon
so has part: feature:536973-537076:-1:exon
so has part: feature:536803-536895:-1:exon
so has part: feature:536483-536726:-1:exon
so has part: feature:536159-536413:-1:exon

position:548929:-1
position: 548929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548731-548929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548240-548328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548050-548143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547795-547936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547466-547715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:547201-547395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547039-547119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546730-546955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546493-546632:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546310-546426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546046-546225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545766-545978:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545488-545660:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:545152-545374:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544837-545058:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544518-544722:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544302-544418:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544017-544188:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543714-543845:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543509-543648:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:543286-543423:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542899-543101:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:542717-542789:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:542352-542554:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:542176-542224:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541911-541991:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541641-541658:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:541352-541503:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:541154-541278:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:540986-541084:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:540688-540883:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:540516-540610:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:540177-540209:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:539979-540084:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:539817-539891:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:539467-539636:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:539223-539400:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:539006-539121:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:538734-538878:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:538527-538650:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:538292-538421:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:538100-538220:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:537894-537956:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:537720-537826:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:537360-537501:-1:exon

position:537501:-1
position: 537501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:537156-537290:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:536973-537076:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:536803-536895:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:536483-536726:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:536159-536413:-1:exon

ABCA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ABCA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ABCA7 isoform X2
translation: MAAGTQLGLLLWKNLVHRRRQQVQLAIELLWPLFLFVILIAVRQSHPPFQQHQCHFPNKALPSAGTLPWLQGIICNVNNPCFQHPTPGEAPGVVGNFNGSILSRLLAEARRVVLHAEGQQLPQHFAQLLPALRGLGALSLAPPARPLRDFLREDETLVRLLHTDASLPPTLVEELLGARLNPRALFSRGAWTPLEVVVCNGSELGAFLEGRDAAGTQRLQRGLCALPGPKLRALGATVLSQLDLPRLLAERLSAEADGAVGALGPFLRGAESLLREVSSMGSVAELRHEVRALRATGTSGAFGALSRIACGHPEGGGLRVPSLNWYEDNDVKAFLDRGGSERGAGALDNGSSPFCRELIRSLEATPLSQLFWRGIKPLFVGKILYTPPGPATDSIMAEVNRTFQELVALRDAAGAWRELGPQIRAFLNSSLELQVLRELLLAPGTAPLLDGILNGTSWTASALARFLAGPAAGPGLSWRQVLDEADQVVGTLSQLLECVRVDKIEAVATEEQLVARALELLEERQFWAAVVFQPPLSASATALPPHVRYKIRMDIDDVTRTNKIKDRSWDPGPAADPFSDLRYVWGGFVYVQDLVEQAVVRAQTGAAPRTGVYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVHEKEARLKETMKAMGLSSGILWLSWFLSSFIPFLLSSAFLVLILKLGNILPYSDPAVIFLFLGTFSVATICQCFLISTFFLRANLASACGGIIYFSLYLPYVLCVAWRDHVTFPLRVLVSLLSPVAFGFGCEYFSLYEEQGMGIQWHNLGVSPVPGDPYSFATATGLLLLDAGLYGLATWYIEGVFPGQYGVPKPWNFPFLKSYWFGEPPSAGHPPFPTDPLTAPQVLVEEPPAQLQPGVSIRNLVKIYRSSNRVAVNGLSLDFYEGQITSFLGHNGAGKTTTMSILTGLLPPTSGTAYVLGWDIRCDIDSIRKTMGMCPQHNVLFDILTVEEHIWFYGRLKGLAEEQVKAEMEQLLRDTGLPHKRREQTRNLSGGMQRKLSVAIAFVGGSRVVVLDEPTAGVDPYSRRSIWELLLKYRKGRTIILSTHYMDEAELLGDRIAIIARGRLRCCGSPLFLKARLGTGYYLTLVKRERAEPGSNTSSPPKKSSSGSERSGDTGLGSEQDSEASTVDVPQLSALIQKLVLGSRLVEDIGHEVLFVLPYSGAKDGAFGELFQELDAHLGELGISGYGISDTTLEEIFLKVAEDTGVDGDRTGTRRTSPPGRAAASSEEGDSGAADGELAEEPQETDLLRGAAEGGRRLQGWALTRQQLRALFIKRLLHARRSTRGFFAQIVLPAVFVCIALLFSLIVPPFGKYPPLRLEPWMYGQQFTFFSDDAPGDPDTAQLLGALLAEPGFGTKCMKEAAEATGPCPPASHPDGFWQPPAPPAVLEVLQRGNWTQAEPSPPCQCSGPGARRMLPECPPAAGGLPPPQVQRGTGDILLNLTGRNISDYLVKTYPQIIRQGLKNKKWVNEQRYGGFSLGAGSSQLLPSAEEVDRAVQELRALFNITKGSPADRLLGNLSRFFEGLDARRNIKVWFNNKGWHAVVSFLNVASNALLRARLPAGADPALYGITATNHPLNLTKEQLSEAALMATSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVSGMKPLTYWLGNFAWDMCNYLVPALLVVLIFLCFQQKAYVSSANLPALVLLLLLYGWSITPLMYPASFLFSIPSTAYVALTCINLFIGINGSVATFVLELFVDQKLNDINRILKKVFLVFPHFCLGRGLIDMVKNQAMADAFERFGDKRFVSPLSWDLAGKNMFAMAVEGIIFFLFTLLLQYRFFLRLRPRALQLPPLGDEDQDVAQERVRVGSSPRHGDVLLLKDLTKVYRRRRAPAVDRLCLAIPAGECFGLLGVNGAGKTSTFKMLTGDTEVTLGEAWLKGHSLSSVPATSSPCPSSRSVLTDLQSVHQNMGYCPQFDAITDLLTG…
SIO_010081: ABCA7
subclass of: SO_0000673
so part of: ABCA7
location: complement(join(536273..536413,536483..536726,536803..536895,536973..537076,537156..537290,537360..537549,537720..537826,537894..537956,538100..538220,538292..538421,538527..538650,538734..538878,539006..539121,539223..539400,539467..539636,539817..539891,539979..540084,540177..540209,540516..540610,540688..540883,540986..541084,541154..541278,541352..541503,541911..541991,542176..542224,542352..542554,542717..542789,542899..543101,543286..543423,543509..543648,543714..543845,544017..544188,544302..544418,544518..544722,544837..545058,545152..545374,545488..545660,545766..545978,546046..546225,546310..546426,546493..546632,546730..546955,547039..547119,547201..547395,547466..547715,547795..547936,548050..548143,548240..548305))
location: region:536273-548305:-1
so has part: feature:548240-548305:-1:exon
so has part: feature:548050-548143:-1:exon
so has part: feature:547795-547936:-1:exon
so has part: feature:547466-547715:-1:exon
so has part: feature:547201-547395:-1:exon
so has part: feature:547039-547119:-1:exon
so has part: feature:546730-546955:-1:exon
so has part: feature:546493-546632:-1:exon
so has part: feature:546310-546426:-1:exon
so has part: feature:546046-546225:-1:exon
so has part: feature:545766-545978:-1:exon
so has part: feature:545488-545660:-1:exon
so has part: feature:545152-545374:-1:exon
so has part: feature:544837-545058:-1:exon
so has part: feature:544518-544722:-1:exon
so has part: feature:544302-544418:-1:exon
so has part: feature:544017-544188:-1:exon
so has part: feature:543714-543845:-1:exon
so has part: feature:543509-543648:-1:exon
so has part: feature:543286-543423:-1:exon
so has part: feature:542899-543101:-1:exon
so has part: feature:542717-542789:-1:exon
so has part: feature:542352-542554:-1:exon
so has part: feature:542176-542224:-1:exon
so has part: feature:541911-541991:-1:exon
so has part: feature:541352-541503:-1:exon
so has part: feature:541154-541278:-1:exon
so has part: feature:540986-541084:-1:exon
so has part: feature:540688-540883:-1:exon
so has part: feature:540516-540610:-1:exon
so has part: feature:540177-540209:-1:exon
so has part: feature:539979-540084:-1:exon
so has part: feature:539817-539891:-1:exon
so has part: feature:539467-539636:-1:exon
so has part: feature:539223-539400:-1:exon
so has part: feature:539006-539121:-1:exon
so has part: feature:538734-538878:-1:exon
so has part: feature:538527-538650:-1:exon
so has part: feature:538292-538421:-1:exon
so has part: feature:538100-538220:-1:exon
so has part: feature:537894-537956:-1:exon
so has part: feature:537720-537826:-1:exon
so has part: feature:537360-537549:-1:exon
so has part: feature:537156-537290:-1:exon
so has part: feature:536973-537076:-1:exon
so has part: feature:536803-536895:-1:exon
so has part: feature:536483-536726:-1:exon
so has part: feature:536273-536413:-1:exon

XP_035203975.1
type: Protein
SIO_000068: ncbiprotein

position:536273:-1
position: 536273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548305:-1
position: 548305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548240-548305:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548050-548143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547795-547936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547466-547715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547201-547395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:547039-547119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546730-546955:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546493-546632:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546310-546426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546046-546225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545766-545978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545488-545660:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545152-545374:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544837-545058:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544518-544722:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544302-544418:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544017-544188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543714-543845:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543509-543648:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543286-543423:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542899-543101:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542717-542789:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:542352-542554:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:542176-542224:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541911-541991:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541352-541503:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541154-541278:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:540986-541084:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:540688-540883:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:540516-540610:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:540177-540209:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:539979-540084:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:539817-539891:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:539467-539636:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:539223-539400:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:539006-539121:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:538734-538878:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:538527-538650:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:538292-538421:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:538100-538220:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:537894-537956:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:537720-537826:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:537360-537549:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:537156-537290:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:536973-537076:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:536803-536895:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:536483-536726:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:536273-536413:-1:exon

ABCA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ABCA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ABCA7 isoform X3
translation: MAAGTQLGLLLWKNLVHRRRQQVQLAIELLWPLFLFVILIAVRQSHPPFQQHQCHFPNKALPSAGTLPWLQGIICNVNNPCFQHPTPGEAPGVVGNFNGSILSRLLAEARRVVLHAEGQQLPQHFAQLLPALRGLGALSLAPPARPLRDFLREDETLVRLLHTDASLPPTLVEELLGARLNPRALFSRGAWTPLEVVVCNGSELGAFLEGRDAAGTQRLQRGLCALPGPKLRALGATVLSQLDLPRLLAERLSAEADGAVGALGPFLRGAESLLREVSSMGSVAELRHEVRALRATGTSGAFGALSRIACGHPEGGGLRVPSLNWYEDNDVKAFLDRGGSERGAGALDNGSSPFCRELIRSLEATPLSQLFWRGIKPLFVGKILYTPPGPATDSIMAEVNRTFQELVALRDAAGAWRELGPQIRAFLNSSLELQVLRELLLAPGTAPLLDGILNGTSWTASALARFLAGPAAGPGLSWRQVLDEADQVVGTLSQLLECVRVDKIEAVATEEQLVARALELLEERQFWAAVVFQPPLSASATALPPHVRYKIRMDIDDVTRTNKIKDRSWDPGPAADPFSDLRYVWGGFVYVQDLVEQAVVRAQTGAAPRTGVYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVHEKEARLKETMKAMGLSSGILWLSWFLSSFIPFLLSSAFLVLILKLGNILPYSDPAVIFLFLGTFSVATICQCFLISTFFLRANLASACGGIIYFSLYLPYVLCVAWRDHVTFPLRVLVSLLSPVAFGFGCEYFSLYEEQGMGIQWHNLGVSPVPGDPYSFATATGLLLLDAGLYGLATWYIEGVFPGQYGVPKPWNFPFLKSYWFGEPPSAGHPPFPTDPLTAPQVLVEEPPAQLQPGVSIRNLVKIYRSSNRVAVNGLSLDFYEGQITSFLGHNGAGKTTTMSILTGLLPPTSGTAYVLGWDIRCDIDSIRKTMGMCPQHNVLFDILTVEEHIWFYGRLKGLAEEQVKAEMEQLLRDTGLPHKRREQTRNLSGGMQRKLSVAIAFVGGSRVVVLDEPTAGVDPYSRRSIWELLLKYRKGRTIILSTHYMDEAELLGDRIAIIARGRLRCCGSPLFLKARLGTGYYLTLVKRERAEPGSNTSSPPKKSSSGSERSGDTGLGSEQDSEASTVDVPQLSALIQKLVLGSRLVEDIGHEVLFVLPYSGAKDGAFGELFQELDAHLGELGISGYGISDTTLEEIFLKVAEDTGVDGDRTGTRRTSPPGRAAASSEEGDSGAADGELAQGARRAEEPQETDLLRGAAEGGRRLQGWALTRQQLRALFIKRLLHARRSTRGFFAQIVLPAVFVCIALLFSLIVPPFGKYPPLRLEPWMYGQQFTFFSDDAPGDPDTAQLLGALLAEPGFGTKCMKEAAEATGPCPPASHPDGFWQPPAPPAVLEVLQRGNWTQAEPSPPCQCSGPGARRMLPECPPAAGGLPPPQVQRGTGDILLNLTGRNISDYLVKTYPQIIRQGLKNKKWVNEQRYGGFSLGAGSSQLLPSAEEVDRAVQELRALFNITKGSPADRLLGNLSRFFEGLDARRNIKVWFNNKGWHAVVSFLNVASNALLRARLPAGADPALYGITATNHPLNLTKEQLSEAALMATSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVSGMKPLTYWLGNFAWDMCNYLVPALLVVLIFLCFQQKAYVSSANLPALVLLLLLYGWSITPLMYPASFLFSIPSTAYVALTCINLFIGINGSVATFVLELFVDQKLNDINRILKKVFLVFPHFCLGRGLIDMVKNQAMADAFERFGDKRFVSPLSWDLAGKNMFAMAVEGIIFFLFTLLLQYRFFLRLRPRALQLPPLGDEDQDVAQERVRVGSSPRHGDVLLLKDLTKVYRRRRAPAVDRLCLAIPAGECFGLLGVNGAGKTSTFKMLTGDTEVTLGEAWLKGHSVLTDLQSVHQNMGYCPQFDAITDLLTGREHLEFYSRL…
SIO_010081: ABCA7
subclass of: SO_0000673
so part of: ABCA7
location: complement(join(536273..536413,536483..536726,536803..536895,536973..537076,537156..537290,537360..537501,537720..537826,537894..537956,538100..538220,538292..538421,538527..538650,538734..538878,539006..539121,539223..539400,539467..539636,539817..539891,539979..540084,540177..540209,540516..540610,540688..540883,540986..541084,541154..541278,541352..541503,541641..541658,541911..541991,542176..542224,542352..542554,542717..542789,542899..543101,543286..543423,543509..543648,543714..543845,544017..544188,544302..544418,544518..544722,544837..545058,545152..545374,545488..545660,545766..545978,546046..546225,546310..546426,546493..546632,546730..546955,547039..547119,547201..547395,547466..547715,547795..547936,548050..548143,548240..548305))
location: region:536273-548305:-1
so has part: feature:548240-548305:-1:exon
so has part: feature:548050-548143:-1:exon
so has part: feature:547795-547936:-1:exon
so has part: feature:547466-547715:-1:exon
so has part: feature:547201-547395:-1:exon
so has part: feature:547039-547119:-1:exon
so has part: feature:546730-546955:-1:exon
so has part: feature:546493-546632:-1:exon
so has part: feature:546310-546426:-1:exon
so has part: feature:546046-546225:-1:exon
so has part: feature:545766-545978:-1:exon
so has part: feature:545488-545660:-1:exon
so has part: feature:545152-545374:-1:exon
so has part: feature:544837-545058:-1:exon
so has part: feature:544518-544722:-1:exon
so has part: feature:544302-544418:-1:exon
so has part: feature:544017-544188:-1:exon
so has part: feature:543714-543845:-1:exon
so has part: feature:543509-543648:-1:exon
so has part: feature:543286-543423:-1:exon
so has part: feature:542899-543101:-1:exon
so has part: feature:542717-542789:-1:exon
so has part: feature:542352-542554:-1:exon
so has part: feature:542176-542224:-1:exon
so has part: feature:541911-541991:-1:exon
so has part: feature:541641-541658:-1:exon
so has part: feature:541352-541503:-1:exon
so has part: feature:541154-541278:-1:exon
so has part: feature:540986-541084:-1:exon
so has part: feature:540688-540883:-1:exon
so has part: feature:540516-540610:-1:exon
so has part: feature:540177-540209:-1:exon
so has part: feature:539979-540084:-1:exon
so has part: feature:539817-539891:-1:exon
so has part: feature:539467-539636:-1:exon
so has part: feature:539223-539400:-1:exon
so has part: feature:539006-539121:-1:exon
so has part: feature:538734-538878:-1:exon
so has part: feature:538527-538650:-1:exon
so has part: feature:538292-538421:-1:exon
so has part: feature:538100-538220:-1:exon
so has part: feature:537894-537956:-1:exon
so has part: feature:537720-537826:-1:exon
so has part: feature:537360-537501:-1:exon
so has part: feature:537156-537290:-1:exon
so has part: feature:536973-537076:-1:exon
so has part: feature:536803-536895:-1:exon
so has part: feature:536483-536726:-1:exon
so has part: feature:536273-536413:-1:exon

XP_035203976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548240-548305:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548050-548143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547795-547936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547466-547715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547201-547395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:547039-547119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546730-546955:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546493-546632:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546310-546426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546046-546225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545766-545978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545488-545660:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545152-545374:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544837-545058:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544518-544722:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544302-544418:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544017-544188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543714-543845:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543509-543648:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543286-543423:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542899-543101:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542717-542789:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:542352-542554:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:542176-542224:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541911-541991:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541641-541658:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541352-541503:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:541154-541278:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:540986-541084:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:540688-540883:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:540516-540610:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:540177-540209:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:539979-540084:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:539817-539891:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:539467-539636:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:539223-539400:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:539006-539121:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:538734-538878:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:538527-538650:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:538292-538421:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:538100-538220:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:537894-537956:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:537720-537826:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:537360-537501:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:537156-537290:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:536973-537076:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:536803-536895:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:536483-536726:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:536273-536413:-1:exon

ABCA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ABCA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ABCA7 isoform X1
translation: MAAGTQLGLLLWKNLVHRRRQQVQLAIELLWPLFLFVILIAVRQSHPPFQQHQCHFPNKALPSAGTLPWLQGIICNVNNPCFQHPTPGEAPGVVGNFNGSILSRLLAEARRVVLHAEGQQLPQHFAQLLPALRGLGALSLAPPARPLRDFLREDETLVRLLHTDASLPPTLVEELLGARLNPRALFSRGAWTPLEVVVCNGSELGAFLEGRDAAGTQRLQRGLCALPGPKLRALGATVLSQLDLPRLLAERLSAEADGAVGALGPFLRGAESLLREVSSMGSVAELRHEVRALRATGTSGAFGALSRIACGHPEGGGLRVPSLNWYEDNDVKAFLDRGGSERGAGALDNGSSPFCRELIRSLEATPLSQLFWRGIKPLFVGKILYTPPGPATDSIMAEVNRTFQELVALRDAAGAWRELGPQIRAFLNSSLELQVLRELLLAPGTAPLLDGILNGTSWTASALARFLAGPAAGPGLSWRQVLDEADQVVGTLSQLLECVRVDKIEAVATEEQLVARALELLEERQFWAAVVFQPPLSASATALPPHVRYKIRMDIDDVTRTNKIKDRSWDPGPAADPFSDLRYVWGGFVYVQDLVEQAVVRAQTGAAPRTGVYVQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIKGVVHEKEARLKETMKAMGLSSGILWLSWFLSSFIPFLLSSAFLVLILKLGNILPYSDPAVIFLFLGTFSVATICQCFLISTFFLRANLASACGGIIYFSLYLPYVLCVAWRDHVTFPLRVLVSLLSPVAFGFGCEYFSLYEEQGMGIQWHNLGVSPVPGDPYSFATATGLLLLDAGLYGLATWYIEGVFPGQYGVPKPWNFPFLKSYWFGEPPSAGHPPFPTDPLTAPQVLVEEPPAQLQPGVSIRNLVKIYRSSNRVAVNGLSLDFYEGQITSFLGHNGAGKTTTMSILTGLLPPTSGTAYVLGWDIRCDIDSIRKTMGMCPQHNVLFDILTVEEHIWFYGRLKGLAEEQVKAEMEQLLRDTGLPHKRREQTRNLSGGMQRKLSVAIAFVGGSRVVVLDEPTAGVDPYSRRSIWELLLKYRKGRTIILSTHYMDEAELLGDRIAIIARGRLRCCGSPLFLKARLGTGYYLTLVKRERAEPGSNTSSPPKKSSSGSERSGDTGLGSEQDSEASTVDVPQLSALIQKLVLGSRLVEDIGHEVLFVLPYSGAKDGAFGELFQELDAHLGELGISGYGISDTTLEEIFLKVAEDTGVDGDRTGTRRTSPPGRAAASSEEGDSGAADGELAQGARRAEEPQETDLLRGAAEGGRRLQGWALTRQQLRALFIKRLLHARRSTRGFFAQIVLPAVFVCIALLFSLIVPPFGKYPPLRLEPWMYGQQFTFFSDDAPGDPDTAQLLGALLAEPGFGTKCMKEAAEATGPCPPASHPDGFWQPPAPPAVLEVLQRGNWTQAEPSPPCQCSGPGARRMLPECPPAAGGLPPPQVQRGTGDILLNLTGRNISDYLVKTYPQIIRQGLKNKKWVNEQRYGGFSLGAGSSQLLPSAEEVDRAVQELRALFNITKGSPADRLLGNLSRFFEGLDARRNIKVWFNNKGWHAVVSFLNVASNALLRARLPAGADPALYGITATNHPLNLTKEQLSEAALMATSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVSGMKPLTYWLGNFAWDMCNYLVPALLVVLIFLCFQQKAYVSSANLPALVLLLLLYGWSITPLMYPASFLFSIPSTAYVALTCINLFIGINGSVATFVLELFVDQKLNDINRILKKVFLVFPHFCLGRGLIDMVKNQAMADAFERFGDKRFVSPLSWDLAGKNMFAMAVEGIIFFLFTLLLQYRFFLRLRPRALQLPPLGDEDQDVAQERVRVGSSPRHGDVLLLKDLTKVYRRRRAPAVDRLCLAIPAGECFGLLGVNGAGKTSTFKMLTGDTEVTLGEAWLKGHSLSSVPATSSPCPSSRSVLTDLQSVHQNMGYCPQFDAI…
SIO_010081: ABCA7
subclass of: SO_0000673
so part of: ABCA7
location: complement(join(536273..536413,536483..536726,536803..536895,536973..537076,537156..537290,537360..537549,537720..537826,537894..537956,538100..538220,538292..538421,538527..538650,538734..538878,539006..539121,539223..539400,539467..539636,539817..539891,539979..540084,540177..540209,540516..540610,540688..540883,540986..541084,541154..541278,541352..541503,541641..541658,541911..541991,542176..542224,542352..542554,542717..542789,542899..543101,543286..543423,543509..543648,543714..543845,544017..544188,544302..544418,544518..544722,544837..545058,545152..545374,545488..545660,545766..545978,546046..546225,546310..546426,546493..546632,546730..546955,547039..547119,547201..547395,547466..547715,547795..547936,548050..548143,548240..548305))
location: region:536273-548305:-1
so has part: feature:548240-548305:-1:exon
so has part: feature:548050-548143:-1:exon
so has part: feature:547795-547936:-1:exon
so has part: feature:547466-547715:-1:exon
so has part: feature:547201-547395:-1:exon
so has part: feature:547039-547119:-1:exon
so has part: feature:546730-546955:-1:exon
so has part: feature:546493-546632:-1:exon
so has part: feature:546310-546426:-1:exon
so has part: feature:546046-546225:-1:exon
so has part: feature:545766-545978:-1:exon
so has part: feature:545488-545660:-1:exon
so has part: feature:545152-545374:-1:exon
so has part: feature:544837-545058:-1:exon
so has part: feature:544518-544722:-1:exon
so has part: feature:544302-544418:-1:exon
so has part: feature:544017-544188:-1:exon
so has part: feature:543714-543845:-1:exon
so has part: feature:543509-543648:-1:exon
so has part: feature:543286-543423:-1:exon
so has part: feature:542899-543101:-1:exon
so has part: feature:542717-542789:-1:exon
so has part: feature:542352-542554:-1:exon
so has part: feature:542176-542224:-1:exon
so has part: feature:541911-541991:-1:exon
so has part: feature:541641-541658:-1:exon
so has part: feature:541352-541503:-1:exon
so has part: feature:541154-541278:-1:exon
so has part: feature:540986-541084:-1:exon
so has part: feature:540688-540883:-1:exon
so has part: feature:540516-540610:-1:exon
so has part: feature:540177-540209:-1:exon
so has part: feature:539979-540084:-1:exon
so has part: feature:539817-539891:-1:exon
so has part: feature:539467-539636:-1:exon
so has part: feature:539223-539400:-1:exon
so has part: feature:539006-539121:-1:exon
so has part: feature:538734-538878:-1:exon
so has part: feature:538527-538650:-1:exon
so has part: feature:538292-538421:-1:exon
so has part: feature:538100-538220:-1:exon
so has part: feature:537894-537956:-1:exon
so has part: feature:537720-537826:-1:exon
so has part: feature:537360-537549:-1:exon
so has part: feature:537156-537290:-1:exon
so has part: feature:536973-537076:-1:exon
so has part: feature:536803-536895:-1:exon
so has part: feature:536483-536726:-1:exon
so has part: feature:536273-536413:-1:exon

XP_035203974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548240-548305:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548050-548143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547795-547936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547466-547715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547201-547395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:547039-547119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546730-546955:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546493-546632:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546310-546426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546046-546225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545766-545978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545488-545660:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545152-545374:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544837-545058:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544518-544722:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544302-544418:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544017-544188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543714-543845:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543509-543648:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543286-543423:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542899-543101:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542717-542789:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:542352-542554:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:542176-542224:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541911-541991:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541641-541658:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541352-541503:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:541154-541278:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:540986-541084:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:540688-540883:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:540516-540610:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:540177-540209:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:539979-540084:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:539817-539891:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:539467-539636:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:539223-539400:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:539006-539121:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:538734-538878:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:538527-538650:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:538292-538421:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:538100-538220:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:537894-537956:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:537720-537826:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:537360-537549:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:537156-537290:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:536973-537076:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:536803-536895:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:536483-536726:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:536273-536413:-1:exon

CNN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CNN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(549334..554350)
location: region:549334-554350:-1
so has part: feature:549334-554350:-1:exon
subclass of: SO_0000010

118179058
type: Gene
SIO_000068: ncbigene

position:549334:-1
position: 549334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554350:-1
position: 554350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549334-554350:-1:exon

CNN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CNN2
product: calponin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_035348091.1
SIO_010081: CNN2
subclass of: SO_0000673
so part of: CNN2
location: complement(join(549334..550126,550206..550352,550514..550870,550951..551017,551304..551425,554198..554350))
location: region:549334-554350:-1
so has part: feature:554198-554350:-1:exon
so has part: feature:551304-551425:-1:exon
so has part: feature:550951-551017:-1:exon
so has part: feature:550514-550870:-1:exon
so has part: feature:550206-550352:-1:exon
so has part: feature:549334-550126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554198-554350:-1:exon

position:554198:-1
position: 554198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551304-551425:-1:exon

position:551304:-1
position: 551304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551425:-1
position: 551425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:550951-551017:-1:exon

position:550951:-1
position: 550951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551017:-1
position: 551017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:550514-550870:-1:exon

position:550514:-1
position: 550514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550870:-1
position: 550870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550206-550352:-1:exon

position:550206:-1
position: 550206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550352:-1
position: 550352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:549334-550126:-1:exon

position:550126:-1
position: 550126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CNN2
product: calponin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_035348092.1
SIO_010081: CNN2
subclass of: SO_0000673
so part of: CNN2
location: complement(join(549334..550126,550206..550352,550514..550630,550733..550870,550951..551017,551304..551425,554198..554349))
location: region:549334-554349:-1
so has part: feature:554198-554349:-1:exon
so has part: feature:551304-551425:-1:exon
so has part: feature:550951-551017:-1:exon
so has part: feature:550733-550870:-1:exon
so has part: feature:550514-550630:-1:exon
so has part: feature:550206-550352:-1:exon
so has part: feature:549334-550126:-1:exon

position:554349:-1
position: 554349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554198-554349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551304-551425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550951-551017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550733-550870:-1:exon

position:550733:-1
position: 550733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550514-550630:-1:exon

position:550630:-1
position: 550630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:550206-550352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549334-550126:-1:exon

CNN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CNN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calponin-2 isoform X2
translation: MSSSQFNKGPSYGLSAEVKNRLAQKYDPQKEAELRTWIESVTGQQIGPDFQKGLKDGVILCELMNKLQPNAVRKINRSAQNWHQLENLSNFIKAMASYGMNPVDLFEANDLFESGNLTQVQVSLLALAGMAKTKGMQSGVDIGVKYSEKQQRNFDEAKMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNQILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDAKMGLEKCDNSSMSLQMGSNQGANQSGQVFGLGRQIYDPKYCPQGGQPEGGDAACEPGADPPGYPYYRPEESC
SIO_010081: CNN2
subclass of: SO_0000673
so part of: CNN2
location: complement(join(549863..550126,550206..550352,550514..550630,550733..550870,550951..551017,551304..551425,554198..554260))
location: region:549863-554260:-1
so has part: feature:554198-554260:-1:exon
so has part: feature:551304-551425:-1:exon
so has part: feature:550951-551017:-1:exon
so has part: feature:550733-550870:-1:exon
so has part: feature:550514-550630:-1:exon
so has part: feature:550206-550352:-1:exon
so has part: feature:549863-550126:-1:exon

XP_035203983.1
type: Protein
SIO_000068: ncbiprotein

position:549863:-1
position: 549863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554260:-1
position: 554260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554198-554260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551304-551425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550951-551017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550733-550870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550514-550630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550206-550352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549863-550126:-1:exon

CNN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CNN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calponin-2 isoform X1
translation: MSSSQFNKGPSYGLSAEVKNRLAQKYDPQKEAELRTWIESVTGQQIGPDFQKGLKDGVILCELMNKLQPNAVRKINRSAQNWHQLENLSNFIKAMASYGMNPVDLFEANDLFESGNLTQVQVSLLALAGMVRARGRGTGRGHRGCGPWGVVRDPPALLATLPRQAKTKGMQSGVDIGVKYSEKQQRNFDEAKMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNQILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDAKMGLEKCDNSSMSLQMGSNQGANQSGQVFGLGRQIYDPKYCPQGGQPEGGDAACEPGADPPGYPYYRPEESC
SIO_010081: CNN2
subclass of: SO_0000673
so part of: CNN2
location: complement(join(549863..550126,550206..550352,550514..550870,550951..551017,551304..551425,554198..554260))
location: region:549863-554260:-1
so has part: feature:554198-554260:-1:exon
so has part: feature:551304-551425:-1:exon
so has part: feature:550951-551017:-1:exon
so has part: feature:550514-550870:-1:exon
so has part: feature:550206-550352:-1:exon
so has part: feature:549863-550126:-1:exon

XP_035203982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554198-554260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551304-551425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550951-551017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550514-550870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550206-550352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549863-550126:-1:exon

ARHGAP45
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ARHGAP45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 555414..574140
location: region:555414-574140:1
so has part: feature:555414-574140:1:exon
subclass of: SO_0000010

118179056
type: Gene
SIO_000068: ncbigene

position:555414:1
position: 555414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574140:1
position: 574140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555414-574140:1:exon

ARHGAP45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARHGAP45
product: Rho GTPase activating protein 45, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_035348090.1
SIO_010081: ARHGAP45
subclass of: SO_0000673
so part of: ARHGAP45
location: join(555414..555651,557528..557858,559521..559664,560927..561011,561383..561455,561764..561836,562576..562713,562942..563006,563203..563313,563776..563856,564421..564600,564785..564922,565042..565232,565338..565498,565912..565989,566399..566500,566876..567039,567561..567749,568118..568255,569464..569705,569821..570082,570878..570980,571434..571740,571771..574140)
location: region:555414-574140:1
so has part: feature:555414-555651:1:exon
so has part: feature:557528-557858:1:exon
so has part: feature:559521-559664:1:exon
so has part: feature:560927-561011:1:exon
so has part: feature:561383-561455:1:exon
so has part: feature:561764-561836:1:exon
so has part: feature:562576-562713:1:exon
so has part: feature:562942-563006:1:exon
so has part: feature:563203-563313:1:exon
so has part: feature:563776-563856:1:exon
so has part: feature:564421-564600:1:exon
so has part: feature:564785-564922:1:exon
so has part: feature:565042-565232:1:exon
so has part: feature:565338-565498:1:exon
so has part: feature:565912-565989:1:exon
so has part: feature:566399-566500:1:exon
so has part: feature:566876-567039:1:exon
so has part: feature:567561-567749:1:exon
so has part: feature:568118-568255:1:exon
so has part: feature:569464-569705:1:exon
so has part: feature:569821-570082:1:exon
so has part: feature:570878-570980:1:exon
so has part: feature:571434-571740:1:exon
so has part: feature:571771-574140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555414-555651:1:exon

position:555651:1
position: 555651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557528-557858:1:exon

position:557528:1
position: 557528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557858:1
position: 557858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559521-559664:1:exon

position:559521:1
position: 559521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559664:1
position: 559664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560927-561011:1:exon

position:560927:1
position: 560927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561011:1
position: 561011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:561383-561455:1:exon

position:561383:1
position: 561383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561455:1
position: 561455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:561764-561836:1:exon

position:561764:1
position: 561764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561836:1
position: 561836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:562576-562713:1:exon

position:562576:1
position: 562576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562713:1
position: 562713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:562942-563006:1:exon

position:562942:1
position: 562942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563006:1
position: 563006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:563203-563313:1:exon

position:563203:1
position: 563203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563313:1
position: 563313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:563776-563856:1:exon

position:563776:1
position: 563776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563856:1
position: 563856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:564421-564600:1:exon

position:564421:1
position: 564421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564600:1
position: 564600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:564785-564922:1:exon

position:564785:1
position: 564785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564922:1
position: 564922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:565042-565232:1:exon

position:565042:1
position: 565042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565232:1
position: 565232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:565338-565498:1:exon

position:565338:1
position: 565338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565498:1
position: 565498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:565912-565989:1:exon

position:565912:1
position: 565912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565989:1
position: 565989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:566399-566500:1:exon

position:566399:1
position: 566399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566500:1
position: 566500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:566876-567039:1:exon

position:566876:1
position: 566876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567039:1
position: 567039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:567561-567749:1:exon

position:567561:1
position: 567561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567749:1
position: 567749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:568118-568255:1:exon

position:568118:1
position: 568118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568255:1
position: 568255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:569464-569705:1:exon

position:569464:1
position: 569464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569705:1
position: 569705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:569821-570082:1:exon

position:569821:1
position: 569821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570082:1
position: 570082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:570878-570980:1:exon

position:570878:1
position: 570878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570980:1
position: 570980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:571434-571740:1:exon

position:571434:1
position: 571434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571740:1
position: 571740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:571771-574140:1:exon

position:571771:1
position: 571771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARHGAP45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 45 isoform X2
translation: MFSRKKRELMKTPSISKKSRAGSPIPQTLPDLSRKDCLEAPGSSLGDLPPASSKLSSSPSAVGTLKRPTSLSRHASAAGFPLTAGAPRAMPKGHKTPMSYSPMEGGEGPFIDVEDISQLLTDVARFADALENLRDVVLRDDPKESQRPQAHECLGEALRVLRQVINKYPLLNTLETLTAAGTLISKVKGFHYESNNETDKREFEKAVETIAVSFSSTVSEFLMGEVDSSTILSIPPSDQNQSMESLYSGISGGVVMPAGTESYDTVRPAAEEVDVMLQRCEGGVDAALQYAKNISKYMKDLIGYLEKRTTLEMEFAKGLQKMANSCKQTITQETSMPFLSIYLLALEQDMEYGTSVLQTVNTLQHQTFLQPLTVRRLEHEKRRKEIKEQWHRAQRKLQDAEVNLRKAKQIYMQRSEEHDKAKYMAAKAEEEQQSTTSGITTKALDKKRRLEEEAKNKAEEAMATYRTCIADANTQKQELEDTKVNSLRQIHELIKQSDQVIKLATIAFYQIMHMQTAPLPVYFQTLCESSKLYDPGQQYASHVKQLQRGDEPDIQYDFEPYVSHNAWSPFIRTRKGSFNANNFSTSSSPDGAGLPKDGAPSEEGAGAKEQQSTAAAAERRGGRGHQVHKSWPTSISEADSGLDSNTGEFSHKLQRLSSNGTMSSSEELEEKDEIATSFEQSINGITPEMTVPTGPFRNVGLSKAAQTHRLRKLRTPSKCRECNSYVYFQGAECEECYLACHKKCLETLAIQCGHKKLQGKLQLFGQDFMKTSQSSSDGIPFIVKKCISEIEKRALKTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPIMPFRMYNELMGLAKESLQGSSGAKGRSEKGGPELVDRGADTDKVVVTLVLKLKELLKELPWENMATLQYLLQHLRRIVEVEQDNKMTSSNLGIIFGPTLMRPRPTEATISLSSLVDYPHQARIIEALIIFYSTIFENKEAPLLADSSKYAADTKEETASSPSPDDTGSQPAAPHGTMPYVALPLEKESLDYSTDSFGGSGDRSVDSDSELEDNGEPPAGGGPRRQLTKQESETSTDEAQYCDDGSEGQRSRTCSTGQSDTEGSAPRCQSPPGEEQSDLEEYPESGLGPAQADCNTTQPSHSCQPPAQP
SIO_010081: ARHGAP45
subclass of: SO_0000673
so part of: ARHGAP45
location: join(555562..555651,557528..557858,559521..559664,560927..561011,561383..561455,561764..561836,562576..562713,562942..563006,563203..563313,563776..563856,564421..564600,564785..564922,565042..565232,565338..565498,565912..565989,566399..566500,566876..567039,567561..567749,568118..568255,569464..569705,569821..570082,570878..570980,571434..571740,571771..571798)
location: region:555562-571798:1
so has part: feature:555562-555651:1:exon
so has part: feature:557528-557858:1:exon
so has part: feature:559521-559664:1:exon
so has part: feature:560927-561011:1:exon
so has part: feature:561383-561455:1:exon
so has part: feature:561764-561836:1:exon
so has part: feature:562576-562713:1:exon
so has part: feature:562942-563006:1:exon
so has part: feature:563203-563313:1:exon
so has part: feature:563776-563856:1:exon
so has part: feature:564421-564600:1:exon
so has part: feature:564785-564922:1:exon
so has part: feature:565042-565232:1:exon
so has part: feature:565338-565498:1:exon
so has part: feature:565912-565989:1:exon
so has part: feature:566399-566500:1:exon
so has part: feature:566876-567039:1:exon
so has part: feature:567561-567749:1:exon
so has part: feature:568118-568255:1:exon
so has part: feature:569464-569705:1:exon
so has part: feature:569821-570082:1:exon
so has part: feature:570878-570980:1:exon
so has part: feature:571434-571740:1:exon
so has part: feature:571771-571798:1:exon

XP_035203981.1
type: Protein
SIO_000068: ncbiprotein

position:555562:1
position: 555562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571798:1
position: 571798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555562-555651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557528-557858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559521-559664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560927-561011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561383-561455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561764-561836:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562576-562713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562942-563006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563203-563313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563776-563856:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:564421-564600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564785-564922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:565042-565232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:565338-565498:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:565912-565989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566399-566500:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:566876-567039:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:567561-567749:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:568118-568255:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:569464-569705:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:569821-570082:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:570878-570980:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:571434-571740:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:571771-571798:1:exon

ARHGAP45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARHGAP45
product: Rho GTPase activating protein 45, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_035348089.1
SIO_010081: ARHGAP45
subclass of: SO_0000673
so part of: ARHGAP45
location: join(555944..556425,557528..557858,559521..559664,560927..561011,561383..561455,561764..561836,562576..562713,562942..563006,563203..563313,563776..563856,564421..564600,564785..564922,565042..565232,565338..565498,565912..565989,566399..566500,566876..567039,567561..567749,568118..568255,569464..569705,569821..570082,570878..570980,571434..571740,571771..574140)
location: region:555944-574140:1
so has part: feature:555944-556425:1:exon
so has part: feature:557528-557858:1:exon
so has part: feature:559521-559664:1:exon
so has part: feature:560927-561011:1:exon
so has part: feature:561383-561455:1:exon
so has part: feature:561764-561836:1:exon
so has part: feature:562576-562713:1:exon
so has part: feature:562942-563006:1:exon
so has part: feature:563203-563313:1:exon
so has part: feature:563776-563856:1:exon
so has part: feature:564421-564600:1:exon
so has part: feature:564785-564922:1:exon
so has part: feature:565042-565232:1:exon
so has part: feature:565338-565498:1:exon
so has part: feature:565912-565989:1:exon
so has part: feature:566399-566500:1:exon
so has part: feature:566876-567039:1:exon
so has part: feature:567561-567749:1:exon
so has part: feature:568118-568255:1:exon
so has part: feature:569464-569705:1:exon
so has part: feature:569821-570082:1:exon
so has part: feature:570878-570980:1:exon
so has part: feature:571434-571740:1:exon
so has part: feature:571771-574140:1:exon

position:555944:1
position: 555944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555944-556425:1:exon

position:556425:1
position: 556425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557528-557858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559521-559664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560927-561011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561383-561455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561764-561836:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562576-562713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562942-563006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563203-563313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563776-563856:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:564421-564600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564785-564922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:565042-565232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:565338-565498:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:565912-565989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566399-566500:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:566876-567039:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:567561-567749:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:568118-568255:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:569464-569705:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:569821-570082:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:570878-570980:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:571434-571740:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:571771-574140:1:exon

ARHGAP45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARHGAP45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 45 isoform X1
translation: MLGRAAGKHSYSPYAAGLRRTGKGSSPKGSLDSLPRTPGVRLTDLSRKDCLEAPGSSLGDLPPASSKLSSSPSAVGTLKRPTSLSRHASAAGFPLTAGAPRAMPKGHKTPMSYSPMEGGEGPFIDVEDISQLLTDVARFADALENLRDVVLRDDPKESQRPQAHECLGEALRVLRQVINKYPLLNTLETLTAAGTLISKVKGFHYESNNETDKREFEKAVETIAVSFSSTVSEFLMGEVDSSTILSIPPSDQNQSMESLYSGISGGVVMPAGTESYDTVRPAAEEVDVMLQRCEGGVDAALQYAKNISKYMKDLIGYLEKRTTLEMEFAKGLQKMANSCKQTITQETSMPFLSIYLLALEQDMEYGTSVLQTVNTLQHQTFLQPLTVRRLEHEKRRKEIKEQWHRAQRKLQDAEVNLRKAKQIYMQRSEEHDKAKYMAAKAEEEQQSTTSGITTKALDKKRRLEEEAKNKAEEAMATYRTCIADANTQKQELEDTKVNSLRQIHELIKQSDQVIKLATIAFYQIMHMQTAPLPVYFQTLCESSKLYDPGQQYASHVKQLQRGDEPDIQYDFEPYVSHNAWSPFIRTRKGSFNANNFSTSSSPDGAGLPKDGAPSEEGAGAKEQQSTAAAAERRGGRGHQVHKSWPTSISEADSGLDSNTGEFSHKLQRLSSNGTMSSSEELEEKDEIATSFEQSINGITPEMTVPTGPFRNVGLSKAAQTHRLRKLRTPSKCRECNSYVYFQGAECEECYLACHKKCLETLAIQCGHKKLQGKLQLFGQDFMKTSQSSSDGIPFIVKKCISEIEKRALKTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPIMPFRMYNELMGLAKESLQGSSGAKGRSEKGGPELVDRGADTDKVVVTLVLKLKELLKELPWENMATLQYLLQHLRRIVEVEQDNKMTSSNLGIIFGPTLMRPRPTEATISLSSLVDYPHQARIIEALIIFYSTIFENKEAPLLADSSKYAADTKEETASSPSPDDTGSQPAAPHGTMPYVALPLEKESLDYSTDSFGGSGDRSVDSDSELEDNGEPPAGGGPRRQLTKQESETSTDEAQYCDDGSEGQRSRTCSTGQSDTEGSAPRCQSPPGEEQSDLEEYPESGLGPAQADCNTTQPSHSCQPPAQP
SIO_010081: ARHGAP45
subclass of: SO_0000673
so part of: ARHGAP45
location: join(556297..556425,557528..557858,559521..559664,560927..561011,561383..561455,561764..561836,562576..562713,562942..563006,563203..563313,563776..563856,564421..564600,564785..564922,565042..565232,565338..565498,565912..565989,566399..566500,566876..567039,567561..567749,568118..568255,569464..569705,569821..570082,570878..570980,571434..571740,571771..571798)
location: region:556297-571798:1
so has part: feature:556297-556425:1:exon
so has part: feature:557528-557858:1:exon
so has part: feature:559521-559664:1:exon
so has part: feature:560927-561011:1:exon
so has part: feature:561383-561455:1:exon
so has part: feature:561764-561836:1:exon
so has part: feature:562576-562713:1:exon
so has part: feature:562942-563006:1:exon
so has part: feature:563203-563313:1:exon
so has part: feature:563776-563856:1:exon
so has part: feature:564421-564600:1:exon
so has part: feature:564785-564922:1:exon
so has part: feature:565042-565232:1:exon
so has part: feature:565338-565498:1:exon
so has part: feature:565912-565989:1:exon
so has part: feature:566399-566500:1:exon
so has part: feature:566876-567039:1:exon
so has part: feature:567561-567749:1:exon
so has part: feature:568118-568255:1:exon
so has part: feature:569464-569705:1:exon
so has part: feature:569821-570082:1:exon
so has part: feature:570878-570980:1:exon
so has part: feature:571434-571740:1:exon
so has part: feature:571771-571798:1:exon

XP_035203980.1
type: Protein
SIO_000068: ncbiprotein

position:556297:1
position: 556297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556297-556425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557528-557858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559521-559664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560927-561011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561383-561455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561764-561836:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562576-562713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562942-563006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563203-563313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563776-563856:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:564421-564600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564785-564922:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:565042-565232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:565338-565498:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:565912-565989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566399-566500:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:566876-567039:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:567561-567749:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:568118-568255:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:569464-569705:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:569821-570082:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:570878-570980:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:571434-571740:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:571771-571798:1:exon

POLR2E
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: POLR2E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(574580..577045)
location: region:574580-577045:-1
so has part: feature:574580-577045:-1:exon
subclass of: SO_0000010

118179059
type: Gene
SIO_000068: ncbigene

position:574580:-1
position: 574580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577045:-1
position: 577045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574580-577045:-1:exon

POLR2E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: POLR2E
product: RNA polymerase II, I and III subunit E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348093.1
SIO_010081: POLR2E
subclass of: SO_0000673
so part of: POLR2E
location: complement(join(574580..574872,574953..575033,575452..575530,575718..575776,575978..576058,576446..576561,576668..576842,576922..577045))
location: region:574580-577045:-1
so has part: feature:576922-577045:-1:exon
so has part: feature:576668-576842:-1:exon
so has part: feature:576446-576561:-1:exon
so has part: feature:575978-576058:-1:exon
so has part: feature:575718-575776:-1:exon
so has part: feature:575452-575530:-1:exon
so has part: feature:574953-575033:-1:exon
so has part: feature:574580-574872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576922-577045:-1:exon

position:576922:-1
position: 576922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576668-576842:-1:exon

position:576668:-1
position: 576668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576842:-1
position: 576842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576446-576561:-1:exon

position:576446:-1
position: 576446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576561:-1
position: 576561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:575978-576058:-1:exon

position:575978:-1
position: 575978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576058:-1
position: 576058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:575718-575776:-1:exon

position:575718:-1
position: 575718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575776:-1
position: 575776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575452-575530:-1:exon

position:575452:-1
position: 575452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575530:-1
position: 575530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574953-575033:-1:exon

position:574953:-1
position: 574953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575033:-1
position: 575033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:574580-574872:-1:exon

position:574872:-1
position: 574872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLR2E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: POLR2E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerases I, II, and III subunit RPABC1
translation: MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLVQ
SIO_010081: POLR2E
subclass of: SO_0000673
so part of: POLR2E
location: complement(join(574968..575033,575452..575530,575718..575776,575978..576058,576446..576561,576668..576842,576922..576978))
location: region:574968-576978:-1
so has part: feature:576922-576978:-1:exon
so has part: feature:576668-576842:-1:exon
so has part: feature:576446-576561:-1:exon
so has part: feature:575978-576058:-1:exon
so has part: feature:575718-575776:-1:exon
so has part: feature:575452-575530:-1:exon
so has part: feature:574968-575033:-1:exon

XP_035203984.1
type: Protein
SIO_000068: ncbiprotein

position:574968:-1
position: 574968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576978:-1
position: 576978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576922-576978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576668-576842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576446-576561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575978-576058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575718-575776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575452-575530:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574968-575033:-1:exon

GPX4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: GPX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 577219..578988
location: region:577219-578988:1
so has part: feature:577219-578988:1:exon
subclass of: SO_0000010

118179060
type: Gene
SIO_000068: ncbigene

position:577219:1
position: 577219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578988:1
position: 578988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577219-578988:1:exon

GPX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GPX4
product: glutathione peroxidase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348094.1
SIO_010081: GPX4
subclass of: SO_0000673
so part of: GPX4
location: join(577219..577296,577456..577550,577693..577837,577962..578113,578222..578246,578492..578551,578708..578988)
location: region:577219-578988:1
so has part: feature:577219-577296:1:exon
so has part: feature:577456-577550:1:exon
so has part: feature:577693-577837:1:exon
so has part: feature:577962-578113:1:exon
so has part: feature:578222-578246:1:exon
so has part: feature:578492-578551:1:exon
so has part: feature:578708-578988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577219-577296:1:exon

position:577296:1
position: 577296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577456-577550:1:exon

position:577456:1
position: 577456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577550:1
position: 577550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577693-577837:1:exon

position:577693:1
position: 577693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577837:1
position: 577837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577962-578113:1:exon

position:577962:1
position: 577962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578113:1
position: 578113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:578222-578246:1:exon

position:578222:1
position: 578222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578246:1
position: 578246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:578492-578551:1:exon

position:578492:1
position: 578492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578551:1
position: 578551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:578708-578988:1:exon

position:578708:1
position: 578708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GPX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:577730..577732,aa:Sec)
product: phospholipid hydroperoxide glutathione peroxidase
translation: MGWGWGWGRALRRGAAAAAAGAGRSMCAQADDWRSAKAIYDFHARDIDGNDVALEKYRGSVCIITNVASKUGKTAVNYTQLVDLHARYAERGLRILGFPCNQFGKQEPGDNAQIKAFAENYGVKFDMFSKIDVNGDDAHPLWKWMKEQPKGRGTLGNAIKWNFTKFLINREGQVVKRYSPMEDPYVIEKDLPAYL
SIO_010081: GPX4
subclass of: SO_0000673
so part of: GPX4
location: join(577219..577296,577456..577550,577693..577837,577962..578113,578222..578246,578492..578551,578708..578740)
location: region:577219-578740:1
so has part: feature:577219-577296:1:exon
so has part: feature:577456-577550:1:exon
so has part: feature:577693-577837:1:exon
so has part: feature:577962-578113:1:exon
so has part: feature:578222-578246:1:exon
so has part: feature:578492-578551:1:exon
so has part: feature:578708-578740:1:exon

XP_035203985.1
type: Protein
SIO_000068: ncbiprotein

position:578740:1
position: 578740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577219-577296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577456-577550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577693-577837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577962-578113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578222-578246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578492-578551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578708-578740:1:exon

SBNO2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SBNO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(582432..626054)
location: region:582432-626054:-1
so has part: feature:582432-626054:-1:exon
subclass of: SO_0000010

118179055
type: Gene
SIO_000068: ncbigene

position:582432:-1
position: 582432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626054:-1
position: 626054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582432-626054:-1:exon

SBNO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SBNO2
product: strawberry notch homolog 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035348086.1
SIO_010081: SBNO2
subclass of: SO_0000673
so part of: SBNO2
location: complement(join(582432..583223,583381..583571,583704..583780,584018..584149,584333..584425,584765..584859,585081..585224,585511..585585,585857..585965,586408..586479,587000..587112,587305..587440,587721..587852,588050..588221,588761..588965,589958..590040,592441..592538,592970..593146,593560..593713,594192..594297,594593..594710,595212..595355,596697..596787,597314..597447,597880..598040,598464..598560,599189..599281,603908..604072,618916..619039,624685..624764,625831..626054))
location: region:582432-626054:-1
so has part: feature:625831-626054:-1:exon
so has part: feature:624685-624764:-1:exon
so has part: feature:618916-619039:-1:exon
so has part: feature:603908-604072:-1:exon
so has part: feature:599189-599281:-1:exon
so has part: feature:598464-598560:-1:exon
so has part: feature:597880-598040:-1:exon
so has part: feature:597314-597447:-1:exon
so has part: feature:596697-596787:-1:exon
so has part: feature:595212-595355:-1:exon
so has part: feature:594593-594710:-1:exon
so has part: feature:594192-594297:-1:exon
so has part: feature:593560-593713:-1:exon
so has part: feature:592970-593146:-1:exon
so has part: feature:592441-592538:-1:exon
so has part: feature:589958-590040:-1:exon
so has part: feature:588761-588965:-1:exon
so has part: feature:588050-588221:-1:exon
so has part: feature:587721-587852:-1:exon
so has part: feature:587305-587440:-1:exon
so has part: feature:587000-587112:-1:exon
so has part: feature:586408-586479:-1:exon
so has part: feature:585857-585965:-1:exon
so has part: feature:585511-585585:-1:exon
so has part: feature:585081-585224:-1:exon
so has part: feature:584765-584859:-1:exon
so has part: feature:584333-584425:-1:exon
so has part: feature:584018-584149:-1:exon
so has part: feature:583704-583780:-1:exon
so has part: feature:583381-583571:-1:exon
so has part: feature:582432-583223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625831-626054:-1:exon

position:625831:-1
position: 625831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624685-624764:-1:exon

position:624685:-1
position: 624685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624764:-1
position: 624764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:618916-619039:-1:exon

position:618916:-1
position: 618916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619039:-1
position: 619039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:603908-604072:-1:exon

position:603908:-1
position: 603908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604072:-1
position: 604072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:599189-599281:-1:exon

position:599189:-1
position: 599189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599281:-1
position: 599281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:598464-598560:-1:exon

position:598464:-1
position: 598464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598560:-1
position: 598560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:597880-598040:-1:exon

position:597880:-1
position: 597880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598040:-1
position: 598040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:597314-597447:-1:exon

position:597314:-1
position: 597314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597447:-1
position: 597447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:596697-596787:-1:exon

position:596697:-1
position: 596697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596787:-1
position: 596787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:595212-595355:-1:exon

position:595212:-1
position: 595212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595355:-1
position: 595355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:594593-594710:-1:exon

position:594593:-1
position: 594593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594710:-1
position: 594710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:594192-594297:-1:exon

position:594192:-1
position: 594192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594297:-1
position: 594297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:593560-593713:-1:exon

position:593560:-1
position: 593560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593713:-1
position: 593713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:592970-593146:-1:exon

position:592970:-1
position: 592970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593146:-1
position: 593146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:592441-592538:-1:exon

position:592441:-1
position: 592441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592538:-1
position: 592538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:589958-590040:-1:exon

position:589958:-1
position: 589958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590040:-1
position: 590040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:588761-588965:-1:exon

position:588761:-1
position: 588761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588965:-1
position: 588965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:588050-588221:-1:exon

position:588050:-1
position: 588050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588221:-1
position: 588221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:587721-587852:-1:exon

position:587721:-1
position: 587721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587852:-1
position: 587852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:587305-587440:-1:exon

position:587305:-1
position: 587305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587440:-1
position: 587440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:587000-587112:-1:exon

position:587000:-1
position: 587000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587112:-1
position: 587112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:586408-586479:-1:exon

position:586408:-1
position: 586408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586479:-1
position: 586479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:585857-585965:-1:exon

position:585857:-1
position: 585857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585965:-1
position: 585965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:585511-585585:-1:exon

position:585511:-1
position: 585511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585585:-1
position: 585585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:585081-585224:-1:exon

position:585081:-1
position: 585081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585224:-1
position: 585224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:584765-584859:-1:exon

position:584765:-1
position: 584765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584859:-1
position: 584859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:584333-584425:-1:exon

position:584333:-1
position: 584333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584425:-1
position: 584425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:584018-584149:-1:exon

position:584018:-1
position: 584018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584149:-1
position: 584149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:583704-583780:-1:exon

position:583704:-1
position: 583704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583780:-1
position: 583780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:583381-583571:-1:exon

position:583381:-1
position: 583381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583571:-1
position: 583571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:582432-583223:-1:exon

position:583223:-1
position: 583223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SBNO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SBNO2
product: strawberry notch homolog 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_035348088.1
SIO_010081: SBNO2
subclass of: SO_0000673
so part of: SBNO2
location: complement(join(582432..583223,583381..583571,583704..583780,584018..584149,584333..584425,584765..584859,585081..585224,585511..585585,585857..585965,586408..586479,587000..587112,587305..587440,587721..587852,588050..588221,588761..588965,589958..590040,592441..592538,592970..593146,593560..593713,594192..594297,594593..594710,595212..595355,596697..596787,597314..597447,597880..598040,598464..598560,599189..599281,603908..604072,615144..615581))
location: region:582432-615581:-1
so has part: feature:615144-615581:-1:exon
so has part: feature:603908-604072:-1:exon
so has part: feature:599189-599281:-1:exon
so has part: feature:598464-598560:-1:exon
so has part: feature:597880-598040:-1:exon
so has part: feature:597314-597447:-1:exon
so has part: feature:596697-596787:-1:exon
so has part: feature:595212-595355:-1:exon
so has part: feature:594593-594710:-1:exon
so has part: feature:594192-594297:-1:exon
so has part: feature:593560-593713:-1:exon
so has part: feature:592970-593146:-1:exon
so has part: feature:592441-592538:-1:exon
so has part: feature:589958-590040:-1:exon
so has part: feature:588761-588965:-1:exon
so has part: feature:588050-588221:-1:exon
so has part: feature:587721-587852:-1:exon
so has part: feature:587305-587440:-1:exon
so has part: feature:587000-587112:-1:exon
so has part: feature:586408-586479:-1:exon
so has part: feature:585857-585965:-1:exon
so has part: feature:585511-585585:-1:exon
so has part: feature:585081-585224:-1:exon
so has part: feature:584765-584859:-1:exon
so has part: feature:584333-584425:-1:exon
so has part: feature:584018-584149:-1:exon
so has part: feature:583704-583780:-1:exon
so has part: feature:583381-583571:-1:exon
so has part: feature:582432-583223:-1:exon

position:615581:-1
position: 615581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615144-615581:-1:exon

position:615144:-1
position: 615144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603908-604072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599189-599281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598464-598560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597880-598040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597314-597447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596697-596787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595212-595355:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:594593-594710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594192-594297:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593560-593713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592970-593146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592441-592538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:589958-590040:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:588761-588965:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:588050-588221:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587721-587852:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587305-587440:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587000-587112:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586408-586479:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585857-585965:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:585511-585585:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:585081-585224:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:584765-584859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:584333-584425:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:584018-584149:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:583704-583780:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:583381-583571:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:582432-583223:-1:exon

SBNO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SBNO2
product: strawberry notch homolog 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_035348087.1
SIO_010081: SBNO2
subclass of: SO_0000673
so part of: SBNO2
location: complement(join(582432..583223,583381..583571,583704..583780,584018..584149,584333..584425,584765..584859,585081..585224,585511..585585,585857..585965,586408..586479,587000..587112,587305..587440,587721..587852,588050..588221,588761..588965,589958..590040,592441..592538,592970..593146,593560..593713,594192..594297,594593..594710,595212..595355,596697..596787,597314..597447,597880..598040,598464..598560,599189..599281,603908..604072,608497..609015))
location: region:582432-609015:-1
so has part: feature:608497-609015:-1:exon
so has part: feature:603908-604072:-1:exon
so has part: feature:599189-599281:-1:exon
so has part: feature:598464-598560:-1:exon
so has part: feature:597880-598040:-1:exon
so has part: feature:597314-597447:-1:exon
so has part: feature:596697-596787:-1:exon
so has part: feature:595212-595355:-1:exon
so has part: feature:594593-594710:-1:exon
so has part: feature:594192-594297:-1:exon
so has part: feature:593560-593713:-1:exon
so has part: feature:592970-593146:-1:exon
so has part: feature:592441-592538:-1:exon
so has part: feature:589958-590040:-1:exon
so has part: feature:588761-588965:-1:exon
so has part: feature:588050-588221:-1:exon
so has part: feature:587721-587852:-1:exon
so has part: feature:587305-587440:-1:exon
so has part: feature:587000-587112:-1:exon
so has part: feature:586408-586479:-1:exon
so has part: feature:585857-585965:-1:exon
so has part: feature:585511-585585:-1:exon
so has part: feature:585081-585224:-1:exon
so has part: feature:584765-584859:-1:exon
so has part: feature:584333-584425:-1:exon
so has part: feature:584018-584149:-1:exon
so has part: feature:583704-583780:-1:exon
so has part: feature:583381-583571:-1:exon
so has part: feature:582432-583223:-1:exon

position:609015:-1
position: 609015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608497-609015:-1:exon

position:608497:-1
position: 608497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603908-604072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599189-599281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598464-598560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597880-598040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597314-597447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596697-596787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595212-595355:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:594593-594710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594192-594297:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593560-593713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592970-593146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592441-592538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:589958-590040:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:588761-588965:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:588050-588221:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587721-587852:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587305-587440:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587000-587112:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586408-586479:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585857-585965:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:585511-585585:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:585081-585224:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:584765-584859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:584333-584425:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:584018-584149:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:583704-583780:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:583381-583571:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:582432-583223:-1:exon

SBNO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SBNO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein strawberry notch homolog 2 isoform X1
translation: MPSAHAAMDGGKSCPQHEHQQAGDALYSVPAFRSQLAVPAMENSMLAADSWSNCYPASFPTSSFLSENQQYFNSPHDFYMNSISRPHFLDTNYASVDPTDFLPKNGDFPQDSSCFNELPNSNSLFSSPADSLSDIADPKDFLPTDSLNHVPTLWDVNPSLQNQIELFTPSRSFGGLNSSNDPVPAVPSTPLLISYQSQAPAEEDDEGDEEETEELGQTETYAEYIPSKSKIGKHHPDLVVETSTLSSVPPPDITYSLSLPCSVADKGSLSALQLEAIIYACQQHEVLLPNGQRAGFLIGDGAGVGKGRTVAGIIFENYLKGRKKALWFSVSNDLKYDAERDLKDIEASHIPVHALNKIKYGDTATSEGVLFATYSALIGESQAGGQHRTRLKQILDWCRENFDGVIVFDECHKAKNASSTKMGKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRAFDEFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFTGVTFRIEEIPLDQQYKIVYDKAAKLWAEALMVFQQAADWIGLESRKSLWGQFWSAHQRFFKYLCIAAKVRRLVELAKEELAKDKCIVIGLQSTGEARTREVLDENDGHLNCFVSAAEGVFLSLIQKHFPSTKRKREKGTGIKRKRKPRSRCAKALRGMCDPAGVIKISDDSSTDSDMGLDSDFNSSPESVFETDDVIFVEHTYNGFAAEDRSNFHMLPSQKEMHGLRELEHVEKMKQDLLAKVKALGKELPLNTLDELINHFGGPEHVAEMTGRKGRVVCRPDGSVMFESRAEQGLSIDHVNLKEKERFMNGEKLVAIISEASSSGISLQADRRVKNQKRRVHMTLELPWSADRAIQQFGRTHRSNQVYAPEYVFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGAKALDRVLSTILNRTDNRVPVPKSYDRREAAFFHEMKQGLISVGICCNQMKYGTVPMEKDCSITKFLNRILGLEVDKQNMLFQYFSDTFDYLIEKDKKEGKYDMGILDLAPGVDEIYEESKEVFLTPGHPQDGQVVFYKISVDRGLKWEEAYEKSLKLTGSFDGFYLSYKTRGSKHTCLLAEQSRGKNFILYKPNIGKQSQPESLDSLHKKYRRVLPEEAKEHWESCYQFSLKKCNHAVWNRSCKLIQEGKECFQGMRLRHYYMLCGALLRVWSKIASIMADITNTSYLQIVRLKTKEKKKQVGIKIPESCVRKVLEELKQMDENVKRKHNRLLQAQEQSPQFSLPLHVLQQPLDLTQSGPGVPLPRHSLHQDEILDLTYSPPSNSIPDVVMNPEPSALCFPSEPVLQPHQQHRLPFGFSHLSAFKSPDPVLEGNVPLSNSLHEHLPLPHPGPLQTLQQQQQEDFVQQDGNINFREILEDMLRTLNGAPQDNMLPQERQSVIQFSGPFPDF
SIO_010081: SBNO2
subclass of: SO_0000673
so part of: SBNO2
location: complement(join(582598..583223,583381..583571,583704..583780,584018..584149,584333..584425,584765..584859,585081..585224,585511..585585,585857..585965,586408..586479,587000..587112,587305..587440,587721..587852,588050..588221,588761..588965,589958..590040,592441..592538,592970..593146,593560..593713,594192..594297,594593..594710,595212..595355,596697..596787,597314..597447,597880..598040,598464..598560,599189..599281,603908..604072,618916..619039,624685..624764,625831..625956))
location: region:582598-625956:-1
so has part: feature:625831-625956:-1:exon
so has part: feature:624685-624764:-1:exon
so has part: feature:618916-619039:-1:exon
so has part: feature:603908-604072:-1:exon
so has part: feature:599189-599281:-1:exon
so has part: feature:598464-598560:-1:exon
so has part: feature:597880-598040:-1:exon
so has part: feature:597314-597447:-1:exon
so has part: feature:596697-596787:-1:exon
so has part: feature:595212-595355:-1:exon
so has part: feature:594593-594710:-1:exon
so has part: feature:594192-594297:-1:exon
so has part: feature:593560-593713:-1:exon
so has part: feature:592970-593146:-1:exon
so has part: feature:592441-592538:-1:exon
so has part: feature:589958-590040:-1:exon
so has part: feature:588761-588965:-1:exon
so has part: feature:588050-588221:-1:exon
so has part: feature:587721-587852:-1:exon
so has part: feature:587305-587440:-1:exon
so has part: feature:587000-587112:-1:exon
so has part: feature:586408-586479:-1:exon
so has part: feature:585857-585965:-1:exon
so has part: feature:585511-585585:-1:exon
so has part: feature:585081-585224:-1:exon
so has part: feature:584765-584859:-1:exon
so has part: feature:584333-584425:-1:exon
so has part: feature:584018-584149:-1:exon
so has part: feature:583704-583780:-1:exon
so has part: feature:583381-583571:-1:exon
so has part: feature:582598-583223:-1:exon

XP_035203977.1
type: Protein
SIO_000068: ncbiprotein

position:582598:-1
position: 582598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625956:-1
position: 625956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625831-625956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624685-624764:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618916-619039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603908-604072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599189-599281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598464-598560:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597880-598040:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597314-597447:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596697-596787:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595212-595355:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594593-594710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594192-594297:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:593560-593713:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592970-593146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:592441-592538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:589958-590040:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:588761-588965:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:588050-588221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587721-587852:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:587305-587440:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:587000-587112:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:586408-586479:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:585857-585965:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:585511-585585:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:585081-585224:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:584765-584859:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:584333-584425:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:584018-584149:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:583704-583780:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:583381-583571:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:582598-583223:-1:exon

SBNO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SBNO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein strawberry notch homolog 2 isoform X3
translation: MKSLHALDSSCFNELPNSNSLFSSPADSLSDIADPKDFLPTDSLNHVPTLWDVNPSLQNQIELFTPSRSFGGLNSSNDPVPAVPSTPLLISYQSQAPAEEDDEGDEEETEELGQTETYAEYIPSKSKIGKHHPDLVVETSTLSSVPPPDITYSLSLPCSVADKGSLSALQLEAIIYACQQHEVLLPNGQRAGFLIGDGAGVGKGRTVAGIIFENYLKGRKKALWFSVSNDLKYDAERDLKDIEASHIPVHALNKIKYGDTATSEGVLFATYSALIGESQAGGQHRTRLKQILDWCRENFDGVIVFDECHKAKNASSTKMGKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRAFDEFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFTGVTFRIEEIPLDQQYKIVYDKAAKLWAEALMVFQQAADWIGLESRKSLWGQFWSAHQRFFKYLCIAAKVRRLVELAKEELAKDKCIVIGLQSTGEARTREVLDENDGHLNCFVSAAEGVFLSLIQKHFPSTKRKREKGTGIKRKRKPRSRCAKALRGMCDPAGVIKISDDSSTDSDMGLDSDFNSSPESVFETDDVIFVEHTYNGFAAEDRSNFHMLPSQKEMHGLRELEHVEKMKQDLLAKVKALGKELPLNTLDELINHFGGPEHVAEMTGRKGRVVCRPDGSVMFESRAEQGLSIDHVNLKEKERFMNGEKLVAIISEASSSGISLQADRRVKNQKRRVHMTLELPWSADRAIQQFGRTHRSNQVYAPEYVFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGAKALDRVLSTILNRTDNRVPVPKSYDRREAAFFHEMKQGLISVGICCNQMKYGTVPMEKDCSITKFLNRILGLEVDKQNMLFQYFSDTFDYLIEKDKKEGKYDMGILDLAPGVDEIYEESKEVFLTPGHPQDGQVVFYKISVDRGLKWEEAYEKSLKLTGSFDGFYLSYKTRGSKHTCLLAEQSRGKNFILYKPNIGKQSQPESLDSLHKKYRRVLPEEAKEHWESCYQFSLKKCNHAVWNRSCKLIQEGKECFQGMRLRHYYMLCGALLRVWSKIASIMADITNTSYLQIVRLKTKEKKKQVGIKIPESCVRKVLEELKQMDENVKRKHNRLLQAQEQSPQFSLPLHVLQQPLDLTQSGPGVPLPRHSLHQDEILDLTYSPPSNSIPDVVMNPEPSALCFPSEPVLQPHQQHRLPFGFSHLSAFKSPDPVLEGNVPLSNSLHEHLPLPHPGPLQTLQQQQQEDFVQQDGNINFREILEDMLRTLNGAPQDNMLPQERQSVIQFSGPFPDF
SIO_010081: SBNO2
subclass of: SO_0000673
so part of: SBNO2
location: complement(join(582598..583223,583381..583571,583704..583780,584018..584149,584333..584425,584765..584859,585081..585224,585511..585585,585857..585965,586408..586479,587000..587112,587305..587440,587721..587852,588050..588221,588761..588965,589958..590040,592441..592538,592970..593146,593560..593713,594192..594297,594593..594710,595212..595355,596697..596787,597314..597447,597880..598040,598464..598560,599189..599281,603908..604072,615144..615164))
location: region:582598-615164:-1
so has part: feature:615144-615164:-1:exon
so has part: feature:603908-604072:-1:exon
so has part: feature:599189-599281:-1:exon
so has part: feature:598464-598560:-1:exon
so has part: feature:597880-598040:-1:exon
so has part: feature:597314-597447:-1:exon
so has part: feature:596697-596787:-1:exon
so has part: feature:595212-595355:-1:exon
so has part: feature:594593-594710:-1:exon
so has part: feature:594192-594297:-1:exon
so has part: feature:593560-593713:-1:exon
so has part: feature:592970-593146:-1:exon
so has part: feature:592441-592538:-1:exon
so has part: feature:589958-590040:-1:exon
so has part: feature:588761-588965:-1:exon
so has part: feature:588050-588221:-1:exon
so has part: feature:587721-587852:-1:exon
so has part: feature:587305-587440:-1:exon
so has part: feature:587000-587112:-1:exon
so has part: feature:586408-586479:-1:exon
so has part: feature:585857-585965:-1:exon
so has part: feature:585511-585585:-1:exon
so has part: feature:585081-585224:-1:exon
so has part: feature:584765-584859:-1:exon
so has part: feature:584333-584425:-1:exon
so has part: feature:584018-584149:-1:exon
so has part: feature:583704-583780:-1:exon
so has part: feature:583381-583571:-1:exon
so has part: feature:582598-583223:-1:exon

XP_035203979.1
type: Protein
SIO_000068: ncbiprotein

position:615164:-1
position: 615164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615144-615164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603908-604072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599189-599281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598464-598560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597880-598040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597314-597447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596697-596787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595212-595355:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:594593-594710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594192-594297:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593560-593713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592970-593146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592441-592538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:589958-590040:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:588761-588965:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:588050-588221:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587721-587852:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587305-587440:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587000-587112:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586408-586479:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585857-585965:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:585511-585585:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:585081-585224:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:584765-584859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:584333-584425:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:584018-584149:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:583704-583780:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:583381-583571:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:582598-583223:-1:exon

SBNO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SBNO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein strawberry notch homolog 2 isoform X2
translation: MSQMQFWLKFSSLFKDSSCFNELPNSNSLFSSPADSLSDIADPKDFLPTDSLNHVPTLWDVNPSLQNQIELFTPSRSFGGLNSSNDPVPAVPSTPLLISYQSQAPAEEDDEGDEEETEELGQTETYAEYIPSKSKIGKHHPDLVVETSTLSSVPPPDITYSLSLPCSVADKGSLSALQLEAIIYACQQHEVLLPNGQRAGFLIGDGAGVGKGRTVAGIIFENYLKGRKKALWFSVSNDLKYDAERDLKDIEASHIPVHALNKIKYGDTATSEGVLFATYSALIGESQAGGQHRTRLKQILDWCRENFDGVIVFDECHKAKNASSTKMGKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRAFDEFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFTGVTFRIEEIPLDQQYKIVYDKAAKLWAEALMVFQQAADWIGLESRKSLWGQFWSAHQRFFKYLCIAAKVRRLVELAKEELAKDKCIVIGLQSTGEARTREVLDENDGHLNCFVSAAEGVFLSLIQKHFPSTKRKREKGTGIKRKRKPRSRCAKALRGMCDPAGVIKISDDSSTDSDMGLDSDFNSSPESVFETDDVIFVEHTYNGFAAEDRSNFHMLPSQKEMHGLRELEHVEKMKQDLLAKVKALGKELPLNTLDELINHFGGPEHVAEMTGRKGRVVCRPDGSVMFESRAEQGLSIDHVNLKEKERFMNGEKLVAIISEASSSGISLQADRRVKNQKRRVHMTLELPWSADRAIQQFGRTHRSNQVYAPEYVFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGAKALDRVLSTILNRTDNRVPVPKSYDRREAAFFHEMKQGLISVGICCNQMKYGTVPMEKDCSITKFLNRILGLEVDKQNMLFQYFSDTFDYLIEKDKKEGKYDMGILDLAPGVDEIYEESKEVFLTPGHPQDGQVVFYKISVDRGLKWEEAYEKSLKLTGSFDGFYLSYKTRGSKHTCLLAEQSRGKNFILYKPNIGKQSQPESLDSLHKKYRRVLPEEAKEHWESCYQFSLKKCNHAVWNRSCKLIQEGKECFQGMRLRHYYMLCGALLRVWSKIASIMADITNTSYLQIVRLKTKEKKKQVGIKIPESCVRKVLEELKQMDENVKRKHNRLLQAQEQSPQFSLPLHVLQQPLDLTQSGPGVPLPRHSLHQDEILDLTYSPPSNSIPDVVMNPEPSALCFPSEPVLQPHQQHRLPFGFSHLSAFKSPDPVLEGNVPLSNSLHEHLPLPHPGPLQTLQQQQQEDFVQQDGNINFREILEDMLRTLNGAPQDNMLPQERQSVIQFSGPFPDF
SIO_010081: SBNO2
subclass of: SO_0000673
so part of: SBNO2
location: complement(join(582598..583223,583381..583571,583704..583780,584018..584149,584333..584425,584765..584859,585081..585224,585511..585585,585857..585965,586408..586479,587000..587112,587305..587440,587721..587852,588050..588221,588761..588965,589958..590040,592441..592538,592970..593146,593560..593713,594192..594297,594593..594710,595212..595355,596697..596787,597314..597447,597880..598040,598464..598560,599189..599281,603908..604072,608497..608541))
location: region:582598-608541:-1
so has part: feature:608497-608541:-1:exon
so has part: feature:603908-604072:-1:exon
so has part: feature:599189-599281:-1:exon
so has part: feature:598464-598560:-1:exon
so has part: feature:597880-598040:-1:exon
so has part: feature:597314-597447:-1:exon
so has part: feature:596697-596787:-1:exon
so has part: feature:595212-595355:-1:exon
so has part: feature:594593-594710:-1:exon
so has part: feature:594192-594297:-1:exon
so has part: feature:593560-593713:-1:exon
so has part: feature:592970-593146:-1:exon
so has part: feature:592441-592538:-1:exon
so has part: feature:589958-590040:-1:exon
so has part: feature:588761-588965:-1:exon
so has part: feature:588050-588221:-1:exon
so has part: feature:587721-587852:-1:exon
so has part: feature:587305-587440:-1:exon
so has part: feature:587000-587112:-1:exon
so has part: feature:586408-586479:-1:exon
so has part: feature:585857-585965:-1:exon
so has part: feature:585511-585585:-1:exon
so has part: feature:585081-585224:-1:exon
so has part: feature:584765-584859:-1:exon
so has part: feature:584333-584425:-1:exon
so has part: feature:584018-584149:-1:exon
so has part: feature:583704-583780:-1:exon
so has part: feature:583381-583571:-1:exon
so has part: feature:582598-583223:-1:exon

XP_035203978.1
type: Protein
SIO_000068: ncbiprotein

position:608541:-1
position: 608541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608497-608541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603908-604072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599189-599281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598464-598560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597880-598040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597314-597447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596697-596787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595212-595355:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:594593-594710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594192-594297:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593560-593713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592970-593146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592441-592538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:589958-590040:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:588761-588965:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:588050-588221:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:587721-587852:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:587305-587440:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:587000-587112:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586408-586479:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:585857-585965:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:585511-585585:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:585081-585224:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:584765-584859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:584333-584425:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:584018-584149:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:583704-583780:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:583381-583571:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:582598-583223:-1:exon

STK11
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: STK11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 642257..677695
location: region:642257-677695:1
so has part: feature:642257-677695:1:exon
subclass of: SO_0000010

118179233
type: Gene
SIO_000068: ncbigene

position:642257:1
position: 642257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677695:1
position: 677695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642257-677695:1:exon

STK11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: STK11
product: serine/threonine kinase 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035348397.1
SIO_010081: STK11
subclass of: SO_0000673
so part of: STK11
location: join(642257..643300,649436..649519,652997..653086,654072..654204,654682..654818,655334..655461,662208..662265,669395..669588,675873..676107,677196..677695)
location: region:642257-677695:1
so has part: feature:642257-643300:1:exon
so has part: feature:649436-649519:1:exon
so has part: feature:652997-653086:1:exon
so has part: feature:654072-654204:1:exon
so has part: feature:654682-654818:1:exon
so has part: feature:655334-655461:1:exon
so has part: feature:662208-662265:1:exon
so has part: feature:669395-669588:1:exon
so has part: feature:675873-676107:1:exon
so has part: feature:677196-677695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642257-643300:1:exon

position:643300:1
position: 643300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:649436-649519:1:exon

position:649436:1
position: 649436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649519:1
position: 649519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652997-653086:1:exon

position:652997:1
position: 652997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653086:1
position: 653086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:654072-654204:1:exon

position:654072:1
position: 654072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654204:1
position: 654204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654682-654818:1:exon

position:654682:1
position: 654682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654818:1
position: 654818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:655334-655461:1:exon

position:655334:1
position: 655334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655461:1
position: 655461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:662208-662265:1:exon

position:662208:1
position: 662208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662265:1
position: 662265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:669395-669588:1:exon

position:669395:1
position: 669395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669588:1
position: 669588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:675873-676107:1:exon

position:675873:1
position: 675873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676107:1
position: 676107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:677196-677695:1:exon

position:677196:1
position: 677196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: STK11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase STK11
translation: MDMQEPQQLGMFAESELMSVGMDTFIHRIDSTEVIYQPRRKRAKLIGKYLMGDLLGEGSYGKVKEMLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVFQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTNGTLKISDLGVAEALHPFAEDDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGDFTIPEDCGPPLSDLLRGMLEYDPAKRFSIQQIRQHNWFRKKHAQAETLVPIPPSPETKDKWRSMTAVPYLEDLHGYNEDEDDDLYDIEDDIIYTQDFTVPGQVPEEEAGQNGQSRGRALPKAVCMNGTEPGQLSTKSKAERRASASSNPSRKACSASSKIRKLSTCKQQ
SIO_010081: STK11
subclass of: SO_0000673
so part of: STK11
location: join(643011..643300,649436..649519,652997..653086,654072..654204,654682..654818,655334..655461,662208..662265,669395..669588,675873..676081)
location: region:643011-676081:1
so has part: feature:643011-643300:1:exon
so has part: feature:649436-649519:1:exon
so has part: feature:652997-653086:1:exon
so has part: feature:654072-654204:1:exon
so has part: feature:654682-654818:1:exon
so has part: feature:655334-655461:1:exon
so has part: feature:662208-662265:1:exon
so has part: feature:669395-669588:1:exon
so has part: feature:675873-676081:1:exon

XP_035204288.1
type: Protein
SIO_000068: ncbiprotein

position:643011:1
position: 643011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676081:1
position: 676081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643011-643300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649436-649519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652997-653086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654072-654204:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654682-654818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655334-655461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662208-662265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:669395-669588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:675873-676081:1:exon

CBARP
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CBARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(677617..722027)
location: region:677617-722027:-1
so has part: feature:677617-722027:-1:exon
subclass of: SO_0000010

118155413
type: Gene
SIO_000068: ncbigene

position:677617:-1
position: 677617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722027:-1
position: 722027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677617-722027:-1:exon

CBARP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CBARP
product: CACN subunit beta associated regulatory protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035308678.1
SIO_010081: CBARP
subclass of: SO_0000673
so part of: CBARP
location: complement(join(677617..680270,680528..680711,680790..680997,681354..681506,681653..681827,681908..682073,682349..682410,682551..682699,701915..701962,721968..722027))
location: region:677617-722027:-1
so has part: feature:721968-722027:-1:exon
so has part: feature:701915-701962:-1:exon
so has part: feature:682551-682699:-1:exon
so has part: feature:682349-682410:-1:exon
so has part: feature:681908-682073:-1:exon
so has part: feature:681653-681827:-1:exon
so has part: feature:681354-681506:-1:exon
so has part: feature:680790-680997:-1:exon
so has part: feature:680528-680711:-1:exon
so has part: feature:677617-680270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721968-722027:-1:exon

position:721968:-1
position: 721968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701915-701962:-1:exon

position:701915:-1
position: 701915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701962:-1
position: 701962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682551-682699:-1:exon

position:682551:-1
position: 682551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682699:-1
position: 682699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682349-682410:-1:exon

position:682349:-1
position: 682349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682410:-1
position: 682410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:681908-682073:-1:exon

position:681908:-1
position: 681908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682073:-1
position: 682073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:681653-681827:-1:exon

position:681653:-1
position: 681653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681827:-1
position: 681827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681354-681506:-1:exon

position:681354:-1
position: 681354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681506:-1
position: 681506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680790-680997:-1:exon

position:680790:-1
position: 680790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680997:-1
position: 680997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:680528-680711:-1:exon

position:680528:-1
position: 680528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680711:-1
position: 680711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:677617-680270:-1:exon

position:680270:-1
position: 680270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CBARP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CBARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel beta subunit-associated regulatory protein
translation: MGKPRRTPQGYLRLKPALGGGPGGTRSPRGHRDGKGQAVPGEVSPQDGYVLLLALLSIFIGGTLVLLSGILIICRRCCEADRRHSRASDDPEKTNTTYLDDSQPAQDITIKVEDPDCLSSSSYRDVETERFLSSSSSTARRVSFNEAALFDQGKKTQEKGRRYTLTEGDFHHLKNARLTHLHLPPPALKIVTIHECESSENSLAMTPRLPPPKPGLAIFQPPAGALPQPALPSHAVCPSSALPGDTYNSTVDTSFAEASPSASSDSGEGPSFAAVPRSGKGAGGGSASPGDAPPAPTQGTVLQFFTRLRRHASLDGASPYFKIKKWKLESTQRASSLDTRGSPKRRQFQRQRAASESMDQEDRDPHQTDIIQYIARTDDVAFHPAGGPFLPSPASPPPSLGRLEPGEGGASEAGALEQPSAYHDIWSLRASLELYASSERSNDQDSVRSDGGDSVSSAGGVAPCPSSSLDEAEGPEEKLWGRPKQEESEPGTRKLLQMDSGYASIEAPSRGGEEGHPKDQTASEKRICFTSAGRKGTIFESFEGREPEEEEEEEEEEEDEGSAARGAVGGGPLRPHSPLAWSPYGQMLAGREAPPRRDYSIDEKTDALFNAFVRHDPQFDESPLRGKHRSRAHLRKQWQHAKQYSDPGVRYPALERHRTPLRRGDSANYPLDARFHSPLPRIVSAGDEEAAEAAEGGPSASPLPDPEIQVIVEEPGEAAPEPKASPEPGGDDCPGPGQCLGLGPGSELMDKITGGLEERLYGHLRKAAESTEQAVAVAASDAPPDHSPV
SIO_010081: CBARP
subclass of: SO_0000673
so part of: CBARP
location: complement(join(679106..680270,680528..680711,680790..680997,681354..681506,681653..681827,681908..682073,682349..682410,682551..682699,701915..701962,721968..722027))
location: region:679106-722027:-1
so has part: feature:721968-722027:-1:exon
so has part: feature:701915-701962:-1:exon
so has part: feature:682551-682699:-1:exon
so has part: feature:682349-682410:-1:exon
so has part: feature:681908-682073:-1:exon
so has part: feature:681653-681827:-1:exon
so has part: feature:681354-681506:-1:exon
so has part: feature:680790-680997:-1:exon
so has part: feature:680528-680711:-1:exon
so has part: feature:679106-680270:-1:exon

XP_035164569.1
type: Protein
SIO_000068: ncbiprotein

position:679106:-1
position: 679106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721968-722027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701915-701962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682551-682699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682349-682410:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681908-682073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681653-681827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681354-681506:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680790-680997:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:680528-680711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:679106-680270:-1:exon

ATP5F1D
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ATP5F1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 684807..687425
location: region:684807-687425:1
so has part: feature:684807-687425:1:exon
subclass of: SO_0000010

118179241
type: Gene
SIO_000068: ncbigene

position:684807:1
position: 684807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687425:1
position: 687425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684807-687425:1:exon

ATP5F1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ATP5F1D
product: ATP synthase F1 subunit delta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035348415.1
SIO_010081: ATP5F1D
subclass of: SO_0000673
so part of: ATP5F1D
location: join(684807..684975,685073..685226,685763..685851,686347..686473,687295..687425)
location: region:684807-687425:1
so has part: feature:684807-684975:1:exon
so has part: feature:685073-685226:1:exon
so has part: feature:685763-685851:1:exon
so has part: feature:686347-686473:1:exon
so has part: feature:687295-687425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684807-684975:1:exon

position:684975:1
position: 684975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685073-685226:1:exon

position:685073:1
position: 685073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685226:1
position: 685226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685763-685851:1:exon

position:685763:1
position: 685763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685851:1
position: 685851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:686347-686473:1:exon

position:686347:1
position: 686347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686473:1
position: 686473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:687295-687425:1:exon

position:687295:1
position: 687295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5F1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ATP5F1D
product: ATP synthase F1 subunit delta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035348414.1
SIO_010081: ATP5F1D
subclass of: SO_0000673
so part of: ATP5F1D
location: join(684808..684975,685073..685226,685763..685851,686347..686473,687026..687069,687274..687425)
location: region:684808-687425:1
so has part: feature:684808-684975:1:exon
so has part: feature:685073-685226:1:exon
so has part: feature:685763-685851:1:exon
so has part: feature:686347-686473:1:exon
so has part: feature:687026-687069:1:exon
so has part: feature:687274-687425:1:exon

position:684808:1
position: 684808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684808-684975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685073-685226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685763-685851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:686347-686473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:687026-687069:1:exon

position:687026:1
position: 687026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687069:1
position: 687069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:687274-687425:1:exon

position:687274:1
position: 687274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5F1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ATP5F1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit delta, mitochondrial
translation: MLCARRLLRLAALPPPRARSYAEPAAGPAAMAFTFASPTQVFYNGAAVKQVDVPTLTGSFGILAAHVPTLQVLKPGVVTVYGEDGAATKYFVSSGSVTVNADSTVQVLAEEAVTMDMLDLATAKSNLEKAISEVAAASDEAAKAEAQIKVEANEALVKALE
SIO_010081: ATP5F1D
subclass of: SO_0000673
so part of: ATP5F1D
location: join(684856..684975,685073..685226,685763..685851,686347..686469)
location: region:684856-686469:1
so has part: feature:684856-684975:1:exon
so has part: feature:685073-685226:1:exon
so has part: feature:685763-685851:1:exon
so has part: feature:686347-686469:1:exon

XP_035204305.1
type: Protein
SIO_000068: ncbiprotein

position:684856:1
position: 684856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686469:1
position: 686469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684856-684975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685073-685226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685763-685851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:686347-686469:1:exon

ATP5F1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ATP5F1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit delta, mitochondrial
translation: MLCARRLLRLAALPPPRARSYAEPAAGPAAMAFTFASPTQVFYNGAAVKQVDVPTLTGSFGILAAHVPTLQVLKPGVVTVYGEDGAATKYFVSSGSVTVNADSTVQVLAEEAVTMDMLDLATAKSNLEKAISEVAAASDEAAKAEAQIKVEANEALVKALE
SIO_010081: ATP5F1D
subclass of: SO_0000673
so part of: ATP5F1D
location: join(684856..684975,685073..685226,685763..685851,686347..686469)
location: region:684856-686469:1
so has part: feature:684856-684975:1:exon
so has part: feature:685073-685226:1:exon
so has part: feature:685763-685851:1:exon
so has part: feature:686347-686469:1:exon

XP_035204306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:684856-684975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685073-685226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685763-685851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:686347-686469:1:exon

CIRBP
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CIRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 724189..728940
location: region:724189-728940:1
so has part: feature:724189-728940:1:exon
subclass of: SO_0000010

118179239
type: Gene
SIO_000068: ncbigene

position:724189:1
position: 724189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728940:1
position: 728940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724189-728940:1:exon

CIRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CIRBP
product: cold inducible RNA binding protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348410.1
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724189..724320,724952..725060,725152..725258,725621..725759,725851..725935,726074..726138,726560..728602,728785..728940)
location: region:724189-728940:1
so has part: feature:724189-724320:1:exon
so has part: feature:724952-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726074-726138:1:exon
so has part: feature:726560-728602:1:exon
so has part: feature:728785-728940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724189-724320:1:exon

position:724320:1
position: 724320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:724952-725060:1:exon

position:724952:1
position: 724952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725060:1
position: 725060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725152-725258:1:exon

position:725152:1
position: 725152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725258:1
position: 725258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:725621-725759:1:exon

position:725621:1
position: 725621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725759:1
position: 725759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:725851-725935:1:exon

position:725851:1
position: 725851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725935:1
position: 725935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:726074-726138:1:exon

position:726074:1
position: 726074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726138:1
position: 726138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:726560-728602:1:exon

position:726560:1
position: 726560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728602:1
position: 728602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:728785-728940:1:exon

position:728785:1
position: 728785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CIRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CIRBP
product: cold inducible RNA binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348407.1
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724194..724320,724952..725060,725152..725258,725621..725759,725851..725935,726071..728602,728785..728940)
location: region:724194-728940:1
so has part: feature:724194-724320:1:exon
so has part: feature:724952-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726071-728602:1:exon
so has part: feature:728785-728940:1:exon

position:724194:1
position: 724194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724194-724320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724952-725060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726071-728602:1:exon

position:726071:1
position: 726071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:728785-728940:1:exon

CIRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CIRBP
product: cold inducible RNA binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348409.1
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724194..724320,724952..725060,725152..725258,725621..725759,725851..725935,726071..726138,726560..728602,728785..728940)
location: region:724194-728940:1
so has part: feature:724194-724320:1:exon
so has part: feature:724952-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726071-726138:1:exon
so has part: feature:726560-728602:1:exon
so has part: feature:728785-728940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724194-724320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724952-725060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726071-726138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:726560-728602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:728785-728940:1:exon

CIRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CIRBP
product: cold inducible RNA binding protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348411.1
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724194..724320,724952..725060,725152..725258,725621..725759,725851..725935,726071..726138,728498..728602,728785..728940)
location: region:724194-728940:1
so has part: feature:724194-724320:1:exon
so has part: feature:724952-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726071-726138:1:exon
so has part: feature:728498-728602:1:exon
so has part: feature:728785-728940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724194-724320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724952-725060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726071-726138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:728498-728602:1:exon

position:728498:1
position: 728498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:728785-728940:1:exon

CIRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CIRBP
product: cold inducible RNA binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348408.1
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724194..724320,724952..725060,725152..725258,725621..725759,725851..725935,726074..728602,728785..728940)
location: region:724194-728940:1
so has part: feature:724194-724320:1:exon
so has part: feature:724952-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726074-728602:1:exon
so has part: feature:728785-728940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724194-724320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724952-725060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726074-728602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:728785-728940:1:exon

CIRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CIRBP
product: cold inducible RNA binding protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035348412.1
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724194..724320,724952..725060,725152..725258,725621..725759,725851..725935,726074..726138,728498..728602,728785..728940)
location: region:724194-728940:1
so has part: feature:724194-724320:1:exon
so has part: feature:724952-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726074-726138:1:exon
so has part: feature:728498-728602:1:exon
so has part: feature:728785-728940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724194-724320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724952-725060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726074-726138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:728498-728602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:728785-728940:1:exon

CIRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CIRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold-inducible RNA-binding protein isoform X5
translation: MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSENRSRGYRGGSSGGRGFFRGGRGRGRGFSRGGGDRGYGGSRFDSRSGGYNGSRDYYNSSRSQGGYGDRSSGGSYRDSYDSYG
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724958..725060,725152..725258,725621..725759,725851..725935,726071..726138,728498..728502)
location: region:724958-728502:1
so has part: feature:724958-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726071-726138:1:exon
so has part: feature:728498-728502:1:exon

XP_035204302.1
type: Protein
SIO_000068: ncbiprotein

position:724958:1
position: 724958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728502:1
position: 728502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724958-725060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726071-726138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:728498-728502:1:exon

CIRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CIRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold-inducible RNA-binding protein isoform X6
translation: MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSENRSRGYRGGSSGGRGFFRGGRGRGRGFSRGGGDRGYGGSRFDSRSGGYNGSRDYYNSRSQGGYGDRSSGGSYRDSYDSYG
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724958..725060,725152..725258,725621..725759,725851..725935,726074..726138,728498..728502)
location: region:724958-728502:1
so has part: feature:724958-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726074-726138:1:exon
so has part: feature:728498-728502:1:exon

XP_035204303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724958-725060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726074-726138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:728498-728502:1:exon

CIRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CIRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold-inducible RNA-binding protein isoform X3
translation: MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSENRSRGYRGGSSGGRGFFRGGRGRGRGFSRGGGDRGYGGSRFDSRSGGYNGSRDYYNSSRSQGGYGDRSSGGSYRDSYDSYATHNE
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724958..725060,725152..725258,725621..725759,725851..725935,726071..726138,726560..726576)
location: region:724958-726576:1
so has part: feature:724958-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726071-726138:1:exon
so has part: feature:726560-726576:1:exon

XP_035204300.1
type: Protein
SIO_000068: ncbiprotein

position:726576:1
position: 726576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724958-725060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726071-726138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726560-726576:1:exon

CIRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CIRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold-inducible RNA-binding protein isoform X4
translation: MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSENRSRGYRGGSSGGRGFFRGGRGRGRGFSRGGGDRGYGGSRFDSRSGGYNGSRDYYNSRSQGGYGDRSSGGSYRDSYDSYATHNE
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724958..725060,725152..725258,725621..725759,725851..725935,726074..726138,726560..726576)
location: region:724958-726576:1
so has part: feature:724958-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726074-726138:1:exon
so has part: feature:726560-726576:1:exon

XP_035204301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724958-725060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726074-726138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726560-726576:1:exon

CIRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CIRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold-inducible RNA-binding protein isoform X1
translation: MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSENRSRGYRGGSSGGRGFFRGGRGRGRGFSRGGGDRGYGGSRFDSRSGGYNGSRDYYNSSRSQGGYGDRSSGGSYRDSYDSYGKSWFKWE
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724958..725060,725152..725258,725621..725759,725851..725935,726071..726164)
location: region:724958-726164:1
so has part: feature:724958-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726071-726164:1:exon

XP_035204298.1
type: Protein
SIO_000068: ncbiprotein

position:726164:1
position: 726164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724958-725060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726071-726164:1:exon

CIRBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CIRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold-inducible RNA-binding protein isoform X2
translation: MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSENRSRGYRGGSSGGRGFFRGGRGRGRGFSRGGGDRGYGGSRFDSRSGGYNGSRDYYNSRSQGGYGDRSSGGSYRDSYDSYGKSWFKWE
SIO_010081: CIRBP
subclass of: SO_0000673
so part of: CIRBP
location: join(724958..725060,725152..725258,725621..725759,725851..725935,726074..726164)
location: region:724958-726164:1
so has part: feature:724958-725060:1:exon
so has part: feature:725152-725258:1:exon
so has part: feature:725621-725759:1:exon
so has part: feature:725851-725935:1:exon
so has part: feature:726074-726164:1:exon

XP_035204299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724958-725060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725152-725258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725621-725759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725851-725935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726074-726164:1:exon

FAM174C
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: FAM174C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 732721..737965
location: region:732721-737965:1
so has part: feature:732721-737965:1:exon
subclass of: SO_0000010

118179244
type: Gene
SIO_000068: ncbigene

position:732721:1
position: 732721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737965:1
position: 737965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:732721-737965:1:exon

FAM174C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: FAM174C
product: family with sequence similarity 174 member C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_035348417.1
SIO_010081: FAM174C
subclass of: SO_0000673
so part of: FAM174C
location: join(732721..733098,733396..733554,734149..737965)
location: region:732721-737965:1
so has part: feature:732721-733098:1:exon
so has part: feature:733396-733554:1:exon
so has part: feature:734149-737965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:732721-733098:1:exon

position:733098:1
position: 733098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:733396-733554:1:exon

position:733396:1
position: 733396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733554:1
position: 733554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734149-737965:1:exon

position:734149:1
position: 734149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM174C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: FAM174C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM174C
translation: MLRPLPRCLLLILLPLLLLLQHGGWAAILTAPAPLNVTEAPQAATGNGTRPGPGPLPGLGLPVLKRALYVLSALSALAAFYFLLRAVRSRSEGPRELKTNFRLKKPQRKKYGLLSNYDENIEMASLDSDEDTVFETRNLRR
SIO_010081: FAM174C
subclass of: SO_0000673
so part of: FAM174C
location: join(732836..733098,733396..733554,734149..734152)
location: region:732836-734152:1
so has part: feature:732836-733098:1:exon
so has part: feature:733396-733554:1:exon
so has part: feature:734149-734152:1:exon

XP_035204308.1
type: Protein
SIO_000068: ncbiprotein

position:732836:1
position: 732836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734152:1
position: 734152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:732836-733098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733396-733554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734149-734152:1:exon

EFNA2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: EFNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 778197..798203
location: region:778197-798203:1
so has part: feature:778197-798203:1:exon
subclass of: SO_0000010

118179240
type: Gene
SIO_000068: ncbigene

position:778197:1
position: 778197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798203:1
position: 798203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778197-798203:1:exon

EFNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EFNA2
product: ephrin A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035348413.1
SIO_010081: EFNA2
subclass of: SO_0000673
so part of: EFNA2
location: join(778197..778427,792283..792575,794625..794690,796074..798203)
location: region:778197-798203:1
so has part: feature:778197-778427:1:exon
so has part: feature:792283-792575:1:exon
so has part: feature:794625-794690:1:exon
so has part: feature:796074-798203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778197-778427:1:exon

position:778427:1
position: 778427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:792283-792575:1:exon

position:792283:1
position: 792283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792575:1
position: 792575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:794625-794690:1:exon

position:794625:1
position: 794625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794690:1
position: 794690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796074-798203:1:exon

position:796074:1
position: 796074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EFNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EFNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-A2
translation: MSRLPAGGMHQYGKFHRGDYTVEVSINDYLDIYCPHYEEPLPAERMERYVLYMVNYEGHASCDHRQKGFKRWECNRPDSPNGPLKFSEKFQLFTPFSLGFEFRPGHEYYYISASPPNMVDRPCLKLKVYVRPTNDSLYESPEPIFTSNNSCCSLRVPHAALVVVPVFWTLLAS
SIO_010081: EFNA2
subclass of: SO_0000673
so part of: EFNA2
location: join(778387..778427,792283..792575,794625..794690,796074..796195)
location: region:778387-796195:1
so has part: feature:778387-778427:1:exon
so has part: feature:792283-792575:1:exon
so has part: feature:794625-794690:1:exon
so has part: feature:796074-796195:1:exon

XP_035204304.1
type: Protein
SIO_000068: ncbiprotein

position:778387:1
position: 778387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796195:1
position: 796195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778387-778427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792283-792575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794625-794690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796074-796195:1:exon

LOC118179232
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118179232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 814118..825342
location: region:814118-825342:1
so has part: feature:814118-825342:1:exon
subclass of: SO_0000010

118179232
type: Gene
SIO_000068: ncbigene

position:814118:1
position: 814118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825342:1
position: 825342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814118-825342:1:exon

LOC118179232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118179232
product: calcium/calmodulin-dependent protein kinase type IV-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035348396.1
SIO_010081: LOC118179232
subclass of: SO_0000673
so part of: LOC118179232
location: join(814118..814337,814805..814965,817904..817982,818257..818319,820356..820438,820557..820629,821003..821093,821228..821302,821722..821797,821916..822042,822386..822538,822746..825342)
location: region:814118-825342:1
so has part: feature:814118-814337:1:exon
so has part: feature:814805-814965:1:exon
so has part: feature:817904-817982:1:exon
so has part: feature:818257-818319:1:exon
so has part: feature:820356-820438:1:exon
so has part: feature:820557-820629:1:exon
so has part: feature:821003-821093:1:exon
so has part: feature:821228-821302:1:exon
so has part: feature:821722-821797:1:exon
so has part: feature:821916-822042:1:exon
so has part: feature:822386-822538:1:exon
so has part: feature:822746-825342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:814118-814337:1:exon

position:814337:1
position: 814337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:814805-814965:1:exon

position:814805:1
position: 814805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814965:1
position: 814965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:817904-817982:1:exon

position:817904:1
position: 817904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817982:1
position: 817982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:818257-818319:1:exon