Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 25, BPBGC_Ojam_1.0, whole genome shotgun sequence.
type: Entry
definition: Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 25, BPBGC_Ojam_1.0, whole genome shotgun sequence.
sequence version: NC_048917.1
sequence date: 2020-07-05
sequence: sequence
division: CON
label: NC_048917.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA641662
dblink: SAMN13257492
keyword: WGS
keyword: RefSeq
source: Oxyura jamaicensis (ruddy duck)
organism: Oxyura jamaicensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021823.1.\nAssembly name: BPBGC_Ojam_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2020/03/10. The original whole-genome shotgun project\nhas the accession JAACYN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Date :: 01-SEP-2019\nAssembly Method :: Supernova 2 v. SEPT-2019\nAssembly Name :: BPBGC_Ojam_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Oxyura jamaicensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2739566
topology: linear
so has quality: SO_0000987
location: 1..2739566
location: region:1-2739566:1
RO_0002162: 8884

NC_048917
type: RefSeq
SIO_000068: refseq

PRJNA641662
type: BioProject
SIO_000068: bioproject

SAMN13257492
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739566:1
position: 2739566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2739566:1:source
so part of: sequence
organism: Oxyura jamaicensis
mol type: genomic DNA
isolate: SHBP4307
chromosome: 25
sex: female
tissue type: blood
dev stage: adult
country: USA: Scotland Neck, NC
breed: ruddy duck

8884
type: Taxonomy
SIO_000068: taxonomy

LOC118178145
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118178145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<262..6994)
location: region:262-6994:-1
so has part: feature:262-6994:-1:exon
subclass of: SO_0000010

118178145
type: Gene
SIO_000068: ncbigene

position:262:-1
position: 262
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:6994:-1
position: 6994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262-6994:-1:exon

LOC118178145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178145
product: rho GTPase-activating protein 30-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346435.1
SIO_010081: LOC118178145
subclass of: SO_0000673
so part of: LOC118178145
location: complement(join(<262..534,860..1184,1974..2173,2253..2711,3317..3394,3491..3591,3920..4059,4159..4286,4390..4497,4586..4668,4743..4887,6244..6346,6886..6994))
location: region:262-6994:-1
so has part: feature:6886-6994:-1:exon
so has part: feature:6244-6346:-1:exon
so has part: feature:4743-4887:-1:exon
so has part: feature:4586-4668:-1:exon
so has part: feature:4390-4497:-1:exon
so has part: feature:4159-4286:-1:exon
so has part: feature:3920-4059:-1:exon
so has part: feature:3491-3591:-1:exon
so has part: feature:3317-3394:-1:exon
so has part: feature:2253-2711:-1:exon
so has part: feature:1974-2173:-1:exon
so has part: feature:860-1184:-1:exon
so has part: feature:262-534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6886-6994:-1:exon

position:6886:-1
position: 6886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6244-6346:-1:exon

position:6244:-1
position: 6244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6346:-1
position: 6346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4743-4887:-1:exon

position:4743:-1
position: 4743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4887:-1
position: 4887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4586-4668:-1:exon

position:4586:-1
position: 4586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4668:-1
position: 4668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4390-4497:-1:exon

position:4390:-1
position: 4390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4497:-1
position: 4497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4159-4286:-1:exon

position:4159:-1
position: 4159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4286:-1
position: 4286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3920-4059:-1:exon

position:3920:-1
position: 3920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059:-1
position: 4059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3491-3591:-1:exon

position:3491:-1
position: 3491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3591:-1
position: 3591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3317-3394:-1:exon

position:3317:-1
position: 3317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3394:-1
position: 3394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2253-2711:-1:exon

position:2253:-1
position: 2253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711:-1
position: 2711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1974-2173:-1:exon

position:1974:-1
position: 1974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2173:-1
position: 2173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:860-1184:-1:exon

position:860:-1
position: 860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184:-1
position: 1184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:262-534:-1:exon

position:534:-1
position: 534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118178145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178145
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 30-like
translation: MSLALKARQKARRKGGAKERVFGCDLLEHLQQSGQDVPQVLRSCTEFVEQHGVVDGIYRLSGVSSNIQRLRQEFDSDRCPDLHRDVYLQDIHCVSSLCKAYFRELPNPLLTYQLYDKFADAVAIQMEEARLVKIKEVLKELPAPHYRTLEFLMRHLLHMASYSSQTNMHARNLAIVWAPNLLRSKDIEVTGFNGTAAFMEVRVQSIVVEFILTHVEQLFGDAPLCGGEAARRSRLLPGDGQAPYHVPAVLSQGDGPPPIRPYHTIIELSEHRRKGSLKAKKWKSIFNLGRSSHEAKRKLVKAEEKEDKCGKLSLRPAKSMDSLSSVPFSSEDDPRLSATRSVKQPPQRRESFDTCPSPVPAEPFPALEESPEEKLKAQEELRGPESEGESGAKSEPTTPKPGRAALVGAGGGRSPAATRNRAEKCAGVHISGPFSVTVPFHITSNLSRLTRGQPCPALAQLGSASPPPPARRSAGEPAAPEIPAGEAKAAEETRLSLELRDSFAFLDSQDTWLEHGGDGDPAVRALPGGSGLEDGDGFLALEEGMEGGFMNPGGPPPRPPPPPPPIEECMDEEMFYMAPSGSDAEDAAGDTDSDDMFLSAHDELSPLAAEPEPPAPQGGHSPPGMRDRSPSPGAPGEAAPGAGEHAGAPAGDAEEGGGSGASTEAWGPPPGSVPIAATLQLGAAPQADPDPEPPGPSPGGAVLRRDGSAPVRLASRLVRVQQARSVPVVPPKPQFAVVPPALRPRTLPAN
SIO_010081: LOC118178145
subclass of: SO_0000673
so part of: LOC118178145
location: complement(join(<262..534,860..1184,1974..2173,2253..2711,3317..3394,3491..3591,3920..4059,4159..4286,4390..4497,4586..4668,4743..4887,6244..6346,6886..6994))
location: region:262-6994:-1
so has part: feature:6886-6994:-1:exon
so has part: feature:6244-6346:-1:exon
so has part: feature:4743-4887:-1:exon
so has part: feature:4586-4668:-1:exon
so has part: feature:4390-4497:-1:exon
so has part: feature:4159-4286:-1:exon
so has part: feature:3920-4059:-1:exon
so has part: feature:3491-3591:-1:exon
so has part: feature:3317-3394:-1:exon
so has part: feature:2253-2711:-1:exon
so has part: feature:1974-2173:-1:exon
so has part: feature:860-1184:-1:exon
so has part: feature:262-534:-1:exon

XP_035202326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6886-6994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6244-6346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4743-4887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4586-4668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4390-4497:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4159-4286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3920-4059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3491-3591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3317-3394:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2253-2711:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1974-2173:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:860-1184:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262-534:-1:exon

NECTIN4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: NECTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7803..15974)
location: region:7803-15974:-1
so has part: feature:7803-15974:-1:exon
subclass of: SO_0000010

118178146
type: Gene
SIO_000068: ncbigene

position:7803:-1
position: 7803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15974:-1
position: 15974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7803-15974:-1:exon

NECTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NECTIN4
product: nectin cell adhesion molecule 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346436.1
SIO_010081: NECTIN4
subclass of: SO_0000673
so part of: NECTIN4
location: complement(join(7803..8874,9385..9489,9911..9989,10112..10259,11418..11581,12432..12546,13283..13573,14317..14869,15783..15974))
location: region:7803-15974:-1
so has part: feature:15783-15974:-1:exon
so has part: feature:14317-14869:-1:exon
so has part: feature:13283-13573:-1:exon
so has part: feature:12432-12546:-1:exon
so has part: feature:11418-11581:-1:exon
so has part: feature:10112-10259:-1:exon
so has part: feature:9911-9989:-1:exon
so has part: feature:9385-9489:-1:exon
so has part: feature:7803-8874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15783-15974:-1:exon

position:15783:-1
position: 15783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14317-14869:-1:exon

position:14317:-1
position: 14317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14869:-1
position: 14869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13283-13573:-1:exon

position:13283:-1
position: 13283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13573:-1
position: 13573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12432-12546:-1:exon

position:12432:-1
position: 12432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12546:-1
position: 12546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11418-11581:-1:exon

position:11418:-1
position: 11418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11581:-1
position: 11581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10112-10259:-1:exon

position:10112:-1
position: 10112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10259:-1
position: 10259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9911-9989:-1:exon

position:9911:-1
position: 9911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9989:-1
position: 9989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9385-9489:-1:exon

position:9385:-1
position: 9385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9489:-1
position: 9489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7803-8874:-1:exon

position:8874:-1
position: 8874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NECTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NECTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nectin-4
translation: MAAPRHAARPRARPAERWVGPAHGNAAAGELRVCPGACKGREGACGCVRVRPGGGAWARSTHPRTSVSACERLRVRTSTHVCKHVRACTSACKHACLHECPRALASVQRHERAGAPRRVPRRRCHPWVPAGCWSGVVEVERSVTAVLGQDVVLPCRYRAQEGEQVVQVTWLKRGPAGHSAEVAVLNRQHGEHVQDAYAGRVLRRAPGALEDGAIVLRNAVQGDEGDYECHLITFPMGSFEGRLTLKVLVPPLPILNPGPPLEEGQGQTLAASCTAEGSPVPSVRWETEVRGTNTTRRSVHSRSASVTSEFFLVPGRSMNGKSLTCVVAHPGLRHEKRITHQLSVAYLSDASVLGHSEEWAEGMEGATLTCLGDGNPPPTYNWTRLNAPLPAGVRVKGDTLVFQRPLAAADAGDYVCRVANRVATKEARANVSVKGRAAENEVRKVDLVSASVVVVGVIAAVLLCVLVVVVVVMTLYHKRKTKRISEKYEEELTLTRENSIRRLHSSHSTDTRTQLEETLHLRAESRQGSLRGDSLRGDSLRGTSICSAMSEEAEGRSYSTLSTVREIETQTEVPAAPLLPAPEGKEPKEEEEDSGDNPIKQAMTHFVQENGMLQAKPTTNGIYINGRGHLV
SIO_010081: NECTIN4
subclass of: SO_0000673
so part of: NECTIN4
location: complement(join(8626..8874,9385..9489,9911..9989,10112..10259,11418..11581,12432..12546,13283..13573,14317..14869,15783..15974))
location: region:8626-15974:-1
so has part: feature:15783-15974:-1:exon
so has part: feature:14317-14869:-1:exon
so has part: feature:13283-13573:-1:exon
so has part: feature:12432-12546:-1:exon
so has part: feature:11418-11581:-1:exon
so has part: feature:10112-10259:-1:exon
so has part: feature:9911-9989:-1:exon
so has part: feature:9385-9489:-1:exon
so has part: feature:8626-8874:-1:exon

XP_035202327.1
type: Protein
SIO_000068: ncbiprotein

position:8626:-1
position: 8626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15783-15974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14317-14869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13283-13573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12432-12546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11418-11581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10112-10259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9911-9989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9385-9489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8626-8874:-1:exon

SNX27
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SNX27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(76344..101486)
location: region:76344-101486:-1
so has part: feature:76344-101486:-1:exon
subclass of: SO_0000010

118178271
type: Gene
SIO_000068: ncbigene

position:76344:-1
position: 76344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101486:-1
position: 101486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76344-101486:-1:exon

SNX27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SNX27
product: sorting nexin 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035346650.1
SIO_010081: SNX27
subclass of: SO_0000673
so part of: SNX27
location: complement(join(76344..76944,79944..80006,81830..81889,82101..82229,82484..82633,84695..84784,85880..86043,88017..88095,89248..89352,90245..90309,91064..91256,91399..91630,101182..101486))
location: region:76344-101486:-1
so has part: feature:101182-101486:-1:exon
so has part: feature:91399-91630:-1:exon
so has part: feature:91064-91256:-1:exon
so has part: feature:90245-90309:-1:exon
so has part: feature:89248-89352:-1:exon
so has part: feature:88017-88095:-1:exon
so has part: feature:85880-86043:-1:exon
so has part: feature:84695-84784:-1:exon
so has part: feature:82484-82633:-1:exon
so has part: feature:82101-82229:-1:exon
so has part: feature:81830-81889:-1:exon
so has part: feature:79944-80006:-1:exon
so has part: feature:76344-76944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101182-101486:-1:exon

position:101182:-1
position: 101182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91399-91630:-1:exon

position:91399:-1
position: 91399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91630:-1
position: 91630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91064-91256:-1:exon

position:91064:-1
position: 91064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91256:-1
position: 91256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90245-90309:-1:exon

position:90245:-1
position: 90245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90309:-1
position: 90309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89248-89352:-1:exon

position:89248:-1
position: 89248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89352:-1
position: 89352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:88017-88095:-1:exon

position:88017:-1
position: 88017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88095:-1
position: 88095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:85880-86043:-1:exon

position:85880:-1
position: 85880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86043:-1
position: 86043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:84695-84784:-1:exon

position:84695:-1
position: 84695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84784:-1
position: 84784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:82484-82633:-1:exon

position:82484:-1
position: 82484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82633:-1
position: 82633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:82101-82229:-1:exon

position:82101:-1
position: 82101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82229:-1
position: 82229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:81830-81889:-1:exon

position:81830:-1
position: 81830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81889:-1
position: 81889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:79944-80006:-1:exon

position:79944:-1
position: 79944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80006:-1
position: 80006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:76344-76944:-1:exon

position:76944:-1
position: 76944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SNX27
product: sorting nexin 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035346651.1
SIO_010081: SNX27
subclass of: SO_0000673
so part of: SNX27
location: complement(join(76344..76944,81830..81889,82101..82229,82484..82633,84695..84784,85880..86043,88017..88095,89248..89352,90245..90309,91064..91256,91399..91630,101182..101485))
location: region:76344-101485:-1
so has part: feature:101182-101485:-1:exon
so has part: feature:91399-91630:-1:exon
so has part: feature:91064-91256:-1:exon
so has part: feature:90245-90309:-1:exon
so has part: feature:89248-89352:-1:exon
so has part: feature:88017-88095:-1:exon
so has part: feature:85880-86043:-1:exon
so has part: feature:84695-84784:-1:exon
so has part: feature:82484-82633:-1:exon
so has part: feature:82101-82229:-1:exon
so has part: feature:81830-81889:-1:exon
so has part: feature:76344-76944:-1:exon

position:101485:-1
position: 101485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101182-101485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91399-91630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91064-91256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90245-90309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89248-89352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88017-88095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85880-86043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84695-84784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:82484-82633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82101-82229:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81830-81889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76344-76944:-1:exon

SNX27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SNX27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-27 isoform X2
translation: MADEEGEGLPRSAAGPQRNGGGEGAPGGPGGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLGGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDITTVTVRVKKNSTTDQVYQAVAAKVGMDSITANYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEVLLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLNMLRTCEGYNEIIFPHCSCDSRRKGHVITAISIKHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMVRSQQRDAAT
SIO_010081: SNX27
subclass of: SO_0000673
so part of: SNX27
location: complement(join(76897..76944,81830..81889,82101..82229,82484..82633,84695..84784,85880..86043,88017..88095,89248..89352,90245..90309,91064..91256,91399..91630,101182..101465))
location: region:76897-101465:-1
so has part: feature:101182-101465:-1:exon
so has part: feature:91399-91630:-1:exon
so has part: feature:91064-91256:-1:exon
so has part: feature:90245-90309:-1:exon
so has part: feature:89248-89352:-1:exon
so has part: feature:88017-88095:-1:exon
so has part: feature:85880-86043:-1:exon
so has part: feature:84695-84784:-1:exon
so has part: feature:82484-82633:-1:exon
so has part: feature:82101-82229:-1:exon
so has part: feature:81830-81889:-1:exon
so has part: feature:76897-76944:-1:exon

XP_035202542.1
type: Protein
SIO_000068: ncbiprotein

position:76897:-1
position: 76897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101465:-1
position: 101465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101182-101465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91399-91630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91064-91256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90245-90309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89248-89352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88017-88095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85880-86043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84695-84784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:82484-82633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82101-82229:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81830-81889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76897-76944:-1:exon

SNX27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SNX27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-27 isoform X1
translation: MADEEGEGLPRSAAGPQRNGGGEGAPGGPGGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLGGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDITTVTVRVKKNSTTDQVYQAVAAKVGMDSITANYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEVLLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLNMLRTCEGYNEIIFPHCSCDSRRKGHVITAISIKHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKDNRNCSKDNMCSKNIFQMVRSQQRDAAT
SIO_010081: SNX27
subclass of: SO_0000673
so part of: SNX27
location: complement(join(76897..76944,79944..80006,81830..81889,82101..82229,82484..82633,84695..84784,85880..86043,88017..88095,89248..89352,90245..90309,91064..91256,91399..91630,101182..101465))
location: region:76897-101465:-1
so has part: feature:101182-101465:-1:exon
so has part: feature:91399-91630:-1:exon
so has part: feature:91064-91256:-1:exon
so has part: feature:90245-90309:-1:exon
so has part: feature:89248-89352:-1:exon
so has part: feature:88017-88095:-1:exon
so has part: feature:85880-86043:-1:exon
so has part: feature:84695-84784:-1:exon
so has part: feature:82484-82633:-1:exon
so has part: feature:82101-82229:-1:exon
so has part: feature:81830-81889:-1:exon
so has part: feature:79944-80006:-1:exon
so has part: feature:76897-76944:-1:exon

XP_035202541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101182-101465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91399-91630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91064-91256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90245-90309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89248-89352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88017-88095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85880-86043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84695-84784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:82484-82633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82101-82229:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81830-81889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:79944-80006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76897-76944:-1:exon

TUFT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TUFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(102268..116768)
location: region:102268-116768:-1
so has part: feature:102268-116768:-1:exon
subclass of: SO_0000010

118178272
type: Gene
SIO_000068: ncbigene

position:102268:-1
position: 102268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116768:-1
position: 116768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102268-116768:-1:exon

TUFT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TUFT1
product: tuftelin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035346656.1
SIO_010081: TUFT1
subclass of: SO_0000673
so part of: TUFT1
location: complement(join(102268..103175,103465..103565,104421..104504,105019..105124,105686..105780,106522..106650,108112..108225,108872..108943,109279..109359,111105..111191,111563..111667,111979..112047,112838..113407))
location: region:102268-113407:-1
so has part: feature:112838-113407:-1:exon
so has part: feature:111979-112047:-1:exon
so has part: feature:111563-111667:-1:exon
so has part: feature:111105-111191:-1:exon
so has part: feature:109279-109359:-1:exon
so has part: feature:108872-108943:-1:exon
so has part: feature:108112-108225:-1:exon
so has part: feature:106522-106650:-1:exon
so has part: feature:105686-105780:-1:exon
so has part: feature:105019-105124:-1:exon
so has part: feature:104421-104504:-1:exon
so has part: feature:103465-103565:-1:exon
so has part: feature:102268-103175:-1:exon

position:113407:-1
position: 113407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112838-113407:-1:exon

position:112838:-1
position: 112838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111979-112047:-1:exon

position:111979:-1
position: 111979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112047:-1
position: 112047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111563-111667:-1:exon

position:111563:-1
position: 111563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111667:-1
position: 111667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:111105-111191:-1:exon

position:111105:-1
position: 111105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111191:-1
position: 111191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109279-109359:-1:exon

position:109279:-1
position: 109279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109359:-1
position: 109359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108872-108943:-1:exon

position:108872:-1
position: 108872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108943:-1
position: 108943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108112-108225:-1:exon

position:108112:-1
position: 108112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108225:-1
position: 108225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106522-106650:-1:exon

position:106522:-1
position: 106522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106650:-1
position: 106650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:105686-105780:-1:exon

position:105686:-1
position: 105686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105780:-1
position: 105780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105019-105124:-1:exon

position:105019:-1
position: 105019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105124:-1
position: 105124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:104421-104504:-1:exon

position:104421:-1
position: 104421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104504:-1
position: 104504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:103465-103565:-1:exon

position:103465:-1
position: 103465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103565:-1
position: 103565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:102268-103175:-1:exon

position:103175:-1
position: 103175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUFT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TUFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tuftelin isoform X4
translation: MPASQPPSSSGTEQLLLSELPSARSMSDGCLGASEESVKVLRLTLPNDLPGDRQVKQKPVGKAFAMVANRSSNGHSLASECIKSNDGDEEIIKVYLKARAEGGVNHEEHVSQLKSEVRYIQEARSSLKKLREDLSSKLENRQGDKQHAQVVLEKQNGSWLHPESPHADSWEDQEEDYSGDDVEKIRQTAKRLFTKLQEAERRHQLEKKDLERVVSQYQEEAEQTSSALRRAEKSVLEKEVQVDELQRLLAGMEKEHRSLLLKMKEGEAELARLRSAEGDRLAEQDRSAKLEKEVAMLREKIHHLDDMLKSQQRKVRQMIEQLQNSKTVIQAKDAVIQELKEKVAYLEAENLEMHDRIEHLIEKQVSRGGHSSRARSKSEYVSSKRLSGPKPLPLIRVVET
SIO_010081: TUFT1
subclass of: SO_0000673
so part of: TUFT1
location: complement(join(103121..103175,103465..103565,104421..104504,105019..105124,105686..105780,106522..106650,108112..108225,108872..108943,109279..109359,111105..111191,111563..111667,111979..112047,112838..112942))
location: region:103121-112942:-1
so has part: feature:112838-112942:-1:exon
so has part: feature:111979-112047:-1:exon
so has part: feature:111563-111667:-1:exon
so has part: feature:111105-111191:-1:exon
so has part: feature:109279-109359:-1:exon
so has part: feature:108872-108943:-1:exon
so has part: feature:108112-108225:-1:exon
so has part: feature:106522-106650:-1:exon
so has part: feature:105686-105780:-1:exon
so has part: feature:105019-105124:-1:exon
so has part: feature:104421-104504:-1:exon
so has part: feature:103465-103565:-1:exon
so has part: feature:103121-103175:-1:exon

XP_035202547.1
type: Protein
SIO_000068: ncbiprotein

position:103121:-1
position: 103121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112942:-1
position: 112942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112838-112942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111979-112047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111563-111667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111105-111191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109279-109359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108872-108943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108112-108225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106522-106650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105686-105780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105019-105124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104421-104504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103465-103565:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:103121-103175:-1:exon

TUFT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TUFT1
product: tuftelin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035346654.1
SIO_010081: TUFT1
subclass of: SO_0000673
so part of: TUFT1
location: complement(join(103697..104187,104398..104504,105019..105124,105686..105780,106522..106650,108112..108225,108872..108943,111105..111191,111563..111667,111979..112047,112838..113424))
location: region:103697-113424:-1
so has part: feature:112838-113424:-1:exon
so has part: feature:111979-112047:-1:exon
so has part: feature:111563-111667:-1:exon
so has part: feature:111105-111191:-1:exon
so has part: feature:108872-108943:-1:exon
so has part: feature:108112-108225:-1:exon
so has part: feature:106522-106650:-1:exon
so has part: feature:105686-105780:-1:exon
so has part: feature:105019-105124:-1:exon
so has part: feature:104398-104504:-1:exon
so has part: feature:103697-104187:-1:exon

position:103697:-1
position: 103697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113424:-1
position: 113424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112838-113424:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111979-112047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111563-111667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111105-111191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108872-108943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108112-108225:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106522-106650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:105686-105780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105019-105124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104398-104504:-1:exon

position:104398:-1
position: 104398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:103697-104187:-1:exon

position:104187:-1
position: 104187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUFT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TUFT1
product: tuftelin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035346652.1
SIO_010081: TUFT1
subclass of: SO_0000673
so part of: TUFT1
location: complement(join(103704..104187,104398..104504,105019..105124,105686..105780,106522..106650,108112..108225,108872..108943,109279..109359,111105..111191,111563..111667,111979..112047,112838..113421))
location: region:103704-113421:-1
so has part: feature:112838-113421:-1:exon
so has part: feature:111979-112047:-1:exon
so has part: feature:111563-111667:-1:exon
so has part: feature:111105-111191:-1:exon
so has part: feature:109279-109359:-1:exon
so has part: feature:108872-108943:-1:exon
so has part: feature:108112-108225:-1:exon
so has part: feature:106522-106650:-1:exon
so has part: feature:105686-105780:-1:exon
so has part: feature:105019-105124:-1:exon
so has part: feature:104398-104504:-1:exon
so has part: feature:103704-104187:-1:exon

position:103704:-1
position: 103704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113421:-1
position: 113421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112838-113421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111979-112047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111563-111667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111105-111191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109279-109359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108872-108943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108112-108225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106522-106650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105686-105780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105019-105124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104398-104504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103704-104187:-1:exon

TUFT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TUFT1
product: tuftelin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_035346653.1
SIO_010081: TUFT1
subclass of: SO_0000673
so part of: TUFT1
location: complement(join(103723..104187,104398..104504,105019..105124,105686..105780,106522..106650,108112..108225,108872..108943,109279..109359,111105..111191,111563..111667,111979..112047,116663..116768))
location: region:103723-116768:-1
so has part: feature:116663-116768:-1:exon
so has part: feature:111979-112047:-1:exon
so has part: feature:111563-111667:-1:exon
so has part: feature:111105-111191:-1:exon
so has part: feature:109279-109359:-1:exon
so has part: feature:108872-108943:-1:exon
so has part: feature:108112-108225:-1:exon
so has part: feature:106522-106650:-1:exon
so has part: feature:105686-105780:-1:exon
so has part: feature:105019-105124:-1:exon
so has part: feature:104398-104504:-1:exon
so has part: feature:103723-104187:-1:exon

position:103723:-1
position: 103723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116663-116768:-1:exon

position:116663:-1
position: 116663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111979-112047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111563-111667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111105-111191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109279-109359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108872-108943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108112-108225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106522-106650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105686-105780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105019-105124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104398-104504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103723-104187:-1:exon

TUFT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TUFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tuftelin isoform X2
translation: MTGRQGWCAVLDVRPHGQSPESVKVLRLTLPNDLPGDRQVKQKPVGKAFAMVANRSSNGHSLASECIKSNDGDEEIIKVYLKARAEGGVNHEEHVSQLKSEVRYIQEARSSLKKLREDLSSKLENRQGDKQHAQVVLEKQNGSWLHPESPHADSWEDQEEDYSGDDVEKIRQTAKRLFTKLQEAERRHQLEKKDLERVVSQYQEEAEQTSSALRRAEKSVLEKEVQVDELQRLLAGMEKEHRSLLLKMKEGEAELARLRSAEGDRLAEQDRSAKLEKEVAMLREKIHHLDDMLKSQQRKVRQMIEQLQNSKTVIQAKDAVIQELKEKVAYLEAEVCPSGAVLFALENVPCAAPRAVLVLEAGVGALSEAVASGAAVSSKGVQNNLSKHVSPAAKPFLPTELQLTACVSEIKIAFLPLGL
SIO_010081: TUFT1
subclass of: SO_0000673
so part of: TUFT1
location: complement(join(103953..104187,104398..104504,105019..105124,105686..105780,106522..106650,108112..108225,108872..108943,109279..109359,111105..111191,111563..111667,111979..112047,116663..116722))
location: region:103953-116722:-1
so has part: feature:116663-116722:-1:exon
so has part: feature:111979-112047:-1:exon
so has part: feature:111563-111667:-1:exon
so has part: feature:111105-111191:-1:exon
so has part: feature:109279-109359:-1:exon
so has part: feature:108872-108943:-1:exon
so has part: feature:108112-108225:-1:exon
so has part: feature:106522-106650:-1:exon
so has part: feature:105686-105780:-1:exon
so has part: feature:105019-105124:-1:exon
so has part: feature:104398-104504:-1:exon
so has part: feature:103953-104187:-1:exon

XP_035202544.1
type: Protein
SIO_000068: ncbiprotein

position:103953:-1
position: 103953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116722:-1
position: 116722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116663-116722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111979-112047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111563-111667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111105-111191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109279-109359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108872-108943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108112-108225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106522-106650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105686-105780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105019-105124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104398-104504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103953-104187:-1:exon

TUFT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TUFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tuftelin isoform X3
translation: MPASQPPSSSGTEQLLLSELPSARSMSDGCLGASEESVKVLRLTLPNDLPGDRQVKQKPVGKAFAMVANRSSNGHSLASECIKSNDGDEEIIKVYLKARAEGGVNHEEHVSQLKSEVRYIQEVVLEKQNGSWLHPESPHADSWEDQEEDYSGDDVEKIRQTAKRLFTKLQEAERRHQLEKKDLERVVSQYQEEAEQTSSALRRAEKSVLEKEVQVDELQRLLAGMEKEHRSLLLKMKEGEAELARLRSAEGDRLAEQDRSAKLEKEVAMLREKIHHLDDMLKSQQRKVRQMIEQLQNSKTVIQAKDAVIQELKEKVAYLEAEVCPSGAVLFALENVPCAAPRAVLVLEAGVGALSEAVASGAAVSSKGVQNNLSKHVSPAAKPFLPTELQLTACVSEIKIAFLPLGL
SIO_010081: TUFT1
subclass of: SO_0000673
so part of: TUFT1
location: complement(join(103953..104187,104398..104504,105019..105124,105686..105780,106522..106650,108112..108225,108872..108943,111105..111191,111563..111667,111979..112047,112838..112942))
location: region:103953-112942:-1
so has part: feature:112838-112942:-1:exon
so has part: feature:111979-112047:-1:exon
so has part: feature:111563-111667:-1:exon
so has part: feature:111105-111191:-1:exon
so has part: feature:108872-108943:-1:exon
so has part: feature:108112-108225:-1:exon
so has part: feature:106522-106650:-1:exon
so has part: feature:105686-105780:-1:exon
so has part: feature:105019-105124:-1:exon
so has part: feature:104398-104504:-1:exon
so has part: feature:103953-104187:-1:exon

XP_035202545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112838-112942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111979-112047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111563-111667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111105-111191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108872-108943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108112-108225:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:106522-106650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:105686-105780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105019-105124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104398-104504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103953-104187:-1:exon

TUFT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TUFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tuftelin isoform X1
translation: MPASQPPSSSGTEQLLLSELPSARSMSDGCLGASEESVKVLRLTLPNDLPGDRQVKQKPVGKAFAMVANRSSNGHSLASECIKSNDGDEEIIKVYLKARAEGGVNHEEHVSQLKSEVRYIQEARSSLKKLREDLSSKLENRQGDKQHAQVVLEKQNGSWLHPESPHADSWEDQEEDYSGDDVEKIRQTAKRLFTKLQEAERRHQLEKKDLERVVSQYQEEAEQTSSALRRAEKSVLEKEVQVDELQRLLAGMEKEHRSLLLKMKEGEAELARLRSAEGDRLAEQDRSAKLEKEVAMLREKIHHLDDMLKSQQRKVRQMIEQLQNSKTVIQAKDAVIQELKEKVAYLEAEVCPSGAVLFALENVPCAAPRAVLVLEAGVGALSEAVASGAAVSSKGVQNNLSKHVSPAAKPFLPTELQLTACVSEIKIAFLPLGL
SIO_010081: TUFT1
subclass of: SO_0000673
so part of: TUFT1
location: complement(join(103953..104187,104398..104504,105019..105124,105686..105780,106522..106650,108112..108225,108872..108943,109279..109359,111105..111191,111563..111667,111979..112047,112838..112942))
location: region:103953-112942:-1
so has part: feature:112838-112942:-1:exon
so has part: feature:111979-112047:-1:exon
so has part: feature:111563-111667:-1:exon
so has part: feature:111105-111191:-1:exon
so has part: feature:109279-109359:-1:exon
so has part: feature:108872-108943:-1:exon
so has part: feature:108112-108225:-1:exon
so has part: feature:106522-106650:-1:exon
so has part: feature:105686-105780:-1:exon
so has part: feature:105019-105124:-1:exon
so has part: feature:104398-104504:-1:exon
so has part: feature:103953-104187:-1:exon

XP_035202543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112838-112942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111979-112047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111563-111667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111105-111191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109279-109359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108872-108943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108112-108225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106522-106650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105686-105780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105019-105124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104398-104504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103953-104187:-1:exon

CGN
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(118242..134635)
location: region:118242-134635:-1
so has part: feature:118242-134635:-1:exon
subclass of: SO_0000010

118178292
type: Gene
SIO_000068: ncbigene

position:118242:-1
position: 118242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134635:-1
position: 134635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118242-134635:-1:exon

CGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CGN
product: cingulin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_035346694.1
SIO_010081: CGN
subclass of: SO_0000673
so part of: CGN
location: complement(join(118242..118844,118936..119099,119183..119291,119368..119486,120172..120255,121548..121637,122337..122498,122577..122747,123259..123516,123648..123854,124070..124270,124373..124514,124611..124759,125109..125321,125400..125541,125821..125972,126106..126201,126458..126527,126795..126895,127362..128433,134565..134635))
location: region:118242-134635:-1
so has part: feature:134565-134635:-1:exon
so has part: feature:127362-128433:-1:exon
so has part: feature:126795-126895:-1:exon
so has part: feature:126458-126527:-1:exon
so has part: feature:126106-126201:-1:exon
so has part: feature:125821-125972:-1:exon
so has part: feature:125400-125541:-1:exon
so has part: feature:125109-125321:-1:exon
so has part: feature:124611-124759:-1:exon
so has part: feature:124373-124514:-1:exon
so has part: feature:124070-124270:-1:exon
so has part: feature:123648-123854:-1:exon
so has part: feature:123259-123516:-1:exon
so has part: feature:122577-122747:-1:exon
so has part: feature:122337-122498:-1:exon
so has part: feature:121548-121637:-1:exon
so has part: feature:120172-120255:-1:exon
so has part: feature:119368-119486:-1:exon
so has part: feature:119183-119291:-1:exon
so has part: feature:118936-119099:-1:exon
so has part: feature:118242-118844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134565-134635:-1:exon

position:134565:-1
position: 134565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127362-128433:-1:exon

position:127362:-1
position: 127362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128433:-1
position: 128433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126795-126895:-1:exon

position:126795:-1
position: 126795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126895:-1
position: 126895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126458-126527:-1:exon

position:126458:-1
position: 126458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126527:-1
position: 126527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:126106-126201:-1:exon

position:126106:-1
position: 126106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126201:-1
position: 126201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:125821-125972:-1:exon

position:125821:-1
position: 125821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125972:-1
position: 125972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:125400-125541:-1:exon

position:125400:-1
position: 125400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125541:-1
position: 125541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125109-125321:-1:exon

position:125109:-1
position: 125109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125321:-1
position: 125321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:124611-124759:-1:exon

position:124611:-1
position: 124611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124759:-1
position: 124759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:124373-124514:-1:exon

position:124373:-1
position: 124373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124514:-1
position: 124514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:124070-124270:-1:exon

position:124070:-1
position: 124070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124270:-1
position: 124270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:123648-123854:-1:exon

position:123648:-1
position: 123648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123854:-1
position: 123854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:123259-123516:-1:exon

position:123259:-1
position: 123259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123516:-1
position: 123516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:122577-122747:-1:exon

position:122577:-1
position: 122577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122747:-1
position: 122747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:122337-122498:-1:exon

position:122337:-1
position: 122337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122498:-1
position: 122498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:121548-121637:-1:exon

position:121548:-1
position: 121548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121637:-1
position: 121637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:120172-120255:-1:exon

position:120172:-1
position: 120172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120255:-1
position: 120255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:119368-119486:-1:exon

position:119368:-1
position: 119368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119486:-1
position: 119486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:119183-119291:-1:exon

position:119183:-1
position: 119183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119291:-1
position: 119291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:118936-119099:-1:exon

position:118936:-1
position: 118936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119099:-1
position: 119099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:118242-118844:-1:exon

position:118844:-1
position: 118844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CGN
product: cingulin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035346695.1
SIO_010081: CGN
subclass of: SO_0000673
so part of: CGN
location: complement(join(118242..118844,118936..119099,119183..119291,119368..119486,120172..120255,121548..121637,122337..122498,122577..122747,123259..123516,123648..123854,124070..124270,124373..124514,124611..124759,125109..125321,125400..125541,125821..125972,126106..126201,126458..126527,126795..126895,127362..128433,128773..129162,129200..129313))
location: region:118242-129313:-1
so has part: feature:129200-129313:-1:exon
so has part: feature:128773-129162:-1:exon
so has part: feature:127362-128433:-1:exon
so has part: feature:126795-126895:-1:exon
so has part: feature:126458-126527:-1:exon
so has part: feature:126106-126201:-1:exon
so has part: feature:125821-125972:-1:exon
so has part: feature:125400-125541:-1:exon
so has part: feature:125109-125321:-1:exon
so has part: feature:124611-124759:-1:exon
so has part: feature:124373-124514:-1:exon
so has part: feature:124070-124270:-1:exon
so has part: feature:123648-123854:-1:exon
so has part: feature:123259-123516:-1:exon
so has part: feature:122577-122747:-1:exon
so has part: feature:122337-122498:-1:exon
so has part: feature:121548-121637:-1:exon
so has part: feature:120172-120255:-1:exon
so has part: feature:119368-119486:-1:exon
so has part: feature:119183-119291:-1:exon
so has part: feature:118936-119099:-1:exon
so has part: feature:118242-118844:-1:exon

position:129313:-1
position: 129313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129200-129313:-1:exon

position:129200:-1
position: 129200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128773-129162:-1:exon

position:128773:-1
position: 128773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129162:-1
position: 129162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127362-128433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126795-126895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126458-126527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126106-126201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125821-125972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125400-125541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125109-125321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:124611-124759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124373-124514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124070-124270:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:123648-123854:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:123259-123516:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:122577-122747:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:122337-122498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:121548-121637:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120172-120255:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:119368-119486:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:119183-119291:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:118936-119099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:118242-118844:-1:exon

CGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cingulin isoform X2
translation: MCHRSYPSPPSARRRLRAGQGGCRAMLAGSEALAAVRLRRSAGTREAAGADPGCGACPGSARCIPPASRLRRVSRTSGRAAVLGPGMDWPASADMAEKQNPVDYGVQIRFINDLQEPKKPPKARAKPGSYGVAVRVQGIAGQPFVVLNSGEKGGDSFGVQIKSEGAYTGPAAGPRPPELPPGSVSPDSELPENPYVRRQPSWSTSDEEPGGGVPVPPRHKPPAKRPPREELRRTQSHGNLLTADDDEGSFAPGPPRVQPGGTHQPRALAGTRSSSMLSVAGPPRPARGEAFGSGAAIREPSSDSEAPGRRRPGDADGSDIDTKPLSSVDSLISKFDGKVQQRGRAARRSRIPSEERKRSQSLDSRVSRRAVPDGRELSGAQRGDVRPPPSGPTGSLGREQGARPVEEGAARSQRANRGTEEPATERLQSKARAELQFKSTPDLLRDQREVAQPGSSEHTKELIYSILKEGSRDSDSSLKRKTALVFEKVQELTVPAKDAACSQPQHRELARKVEELQEQLDEETKLRQKLELTRDPARSGTARALEARLQEAEEESQRLRGALEKKGQELQRSLQELAEAKAARGRAETRLGEREEQLAAMREELGRLREASGGSPDREALYKELLETREELEEALSSKQRQEEHLRLRERELTALKGALKEEVASHDKELDRVRQQYQSDMDQLRRSMEDISQDQASLESEKQKISAVVRNLQRELEESAEETGHWRDMFQKNKDELRTTKQELLQVKLEREEFEEELRELRERFSAVREEADQARSSALDPGELEALRKELRQAQEAQRELAAEKQEQDELLRQRERELQALQGTMREEASSRDGAIEQYRRDLQQLQKERDEAVKEKASLESKRESSEQARKAVESTLRELQEQKDDLRRKVLGMETQLKEYERMGESWEGSQARLKEKVTKLEAERRQMEESLGESTDREQELLMAKRSLETRLDEAQRSLARLTQEHQELSASYQEEQRQKEQLKRAKSELEEQKRLLDRTTEKLSKELEQMTEESNSSLAVLKSQLEEFKEKSRKEITDSQKQAKDRGAEVEKMQFSMGRLQDEVTRLKQALQDSQAERESALLDKEVLLQRLHNLEQEADAKRRSQDDRSRQVKALEEKSKRLEVELDEERTTVELLTERVNRSRDQIDQLRAELLQERSSRQDLECDKVSLERQNKELKNRLASSEGLQKPSGNVSQLEARVEELQDKLQAEEREKSVLLSSTRKLERKVKELTIQIDDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLEAARKKAQRELEEQHELNEQLQARIKTLEKEAWRKAARSAAESSLQDDALSSDEELDSAYGPSSIASLLNEANLQTSSC
SIO_010081: CGN
subclass of: SO_0000673
so part of: CGN
location: complement(join(118703..118844,118936..119099,119183..119291,119368..119486,120172..120255,121548..121637,122337..122498,122577..122747,123259..123516,123648..123854,124070..124270,124373..124514,124611..124759,125109..125321,125400..125541,125821..125972,126106..126201,126458..126527,126795..126895,127362..128433,128773..129008))
location: region:118703-129008:-1
so has part: feature:128773-129008:-1:exon
so has part: feature:127362-128433:-1:exon
so has part: feature:126795-126895:-1:exon
so has part: feature:126458-126527:-1:exon
so has part: feature:126106-126201:-1:exon
so has part: feature:125821-125972:-1:exon
so has part: feature:125400-125541:-1:exon
so has part: feature:125109-125321:-1:exon
so has part: feature:124611-124759:-1:exon
so has part: feature:124373-124514:-1:exon
so has part: feature:124070-124270:-1:exon
so has part: feature:123648-123854:-1:exon
so has part: feature:123259-123516:-1:exon
so has part: feature:122577-122747:-1:exon
so has part: feature:122337-122498:-1:exon
so has part: feature:121548-121637:-1:exon
so has part: feature:120172-120255:-1:exon
so has part: feature:119368-119486:-1:exon
so has part: feature:119183-119291:-1:exon
so has part: feature:118936-119099:-1:exon
so has part: feature:118703-118844:-1:exon

XP_035202586.1
type: Protein
SIO_000068: ncbiprotein

position:118703:-1
position: 118703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129008:-1
position: 129008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128773-129008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127362-128433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126795-126895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126458-126527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126106-126201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125821-125972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125400-125541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125109-125321:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:124611-124759:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:124373-124514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124070-124270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:123648-123854:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:123259-123516:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:122577-122747:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:122337-122498:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:121548-121637:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120172-120255:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119368-119486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:119183-119291:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:118936-119099:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:118703-118844:-1:exon

CGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cingulin isoform X1
translation: MDWPASADMAEKQNPVDYGVQIRFINDLQEPKKPPKARAKPGSYGVAVRVQGIAGQPFVVLNSGEKGGDSFGVQIKSEGAYTGPAAGPRPPELPPGSVSPDSELPENPYVRRQPSWSTSDEEPGGGVPVPPRHKPPAKRPPREELRRTQSHGNLLTADDDEGSFAPGPPRVQPGGTHQPRALAGTRSSSMLSVAGPPRPARGEAFGSGAAIREPSSDSEAPGRRRPGDADGSDIDTKPLSSVDSLISKFDGKVQQRGRAARRSRIPSEERKRSQSLDSRVSRRAVPDGRELSGAQRGDVRPPPSGPTGSLGREQGARPVEEGAARSQRANRGTEEPATERLQSKARAELQFKSTPDLLRDQREVAQPGSSEHTKELIYSILKEGSRDSDSSLKRKTALVFEKVQELTVPAKDAACSQPQHRELARKVEELQEQLDEETKLRQKLELTRDPARSGTARALEARLQEAEEESQRLRGALEKKGQELQRSLQELAEAKAARGRAETRLGEREEQLAAMREELGRLREASGGSPDREALYKELLETREELEEALSSKQRQEEHLRLRERELTALKGALKEEVASHDKELDRVRQQYQSDMDQLRRSMEDISQDQASLESEKQKISAVVRNLQRELEESAEETGHWRDMFQKNKDELRTTKQELLQVKLEREEFEEELRELRERFSAVREEADQARSSALDPGELEALRKELRQAQEAQRELAAEKQEQDELLRQRERELQALQGTMREEASSRDGAIEQYRRDLQQLQKERDEAVKEKASLESKRESSEQARKAVESTLRELQEQKDDLRRKVLGMETQLKEYERMGESWEGSQARLKEKVTKLEAERRQMEESLGESTDREQELLMAKRSLETRLDEAQRSLARLTQEHQELSASYQEEQRQKEQLKRAKSELEEQKRLLDRTTEKLSKELEQMTEESNSSLAVLKSQLEEFKEKSRKEITDSQKQAKDRGAEVEKMQFSMGRLQDEVTRLKQALQDSQAERESALLDKEVLLQRLHNLEQEADAKRRSQDDRSRQVKALEEKSKRLEVELDEERTTVELLTERVNRSRDQIDQLRAELLQERSSRQDLECDKVSLERQNKELKNRLASSEGLQKPSGNVSQLEARVEELQDKLQAEEREKSVLLSSTRKLERKVKELTIQIDDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLEAARKKAQRELEEQHELNEQLQARIKTLEKEAWRKAARSAAESSLQDDALSSDEELDSAYGPSSIASLLNEANLQTSSC
SIO_010081: CGN
subclass of: SO_0000673
so part of: CGN
location: complement(join(118703..118844,118936..119099,119183..119291,119368..119486,120172..120255,121548..121637,122337..122498,122577..122747,123259..123516,123648..123854,124070..124270,124373..124514,124611..124759,125109..125321,125400..125541,125821..125972,126106..126201,126458..126527,126795..126895,127362..128411))
location: region:118703-128411:-1
so has part: feature:127362-128411:-1:exon
so has part: feature:126795-126895:-1:exon
so has part: feature:126458-126527:-1:exon
so has part: feature:126106-126201:-1:exon
so has part: feature:125821-125972:-1:exon
so has part: feature:125400-125541:-1:exon
so has part: feature:125109-125321:-1:exon
so has part: feature:124611-124759:-1:exon
so has part: feature:124373-124514:-1:exon
so has part: feature:124070-124270:-1:exon
so has part: feature:123648-123854:-1:exon
so has part: feature:123259-123516:-1:exon
so has part: feature:122577-122747:-1:exon
so has part: feature:122337-122498:-1:exon
so has part: feature:121548-121637:-1:exon
so has part: feature:120172-120255:-1:exon
so has part: feature:119368-119486:-1:exon
so has part: feature:119183-119291:-1:exon
so has part: feature:118936-119099:-1:exon
so has part: feature:118703-118844:-1:exon

XP_035202585.1
type: Protein
SIO_000068: ncbiprotein

position:128411:-1
position: 128411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127362-128411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126795-126895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126458-126527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126106-126201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125821-125972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125400-125541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125109-125321:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124611-124759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:124373-124514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:124070-124270:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:123648-123854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:123259-123516:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:122577-122747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:122337-122498:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:121548-121637:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:120172-120255:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119368-119486:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119183-119291:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:118936-119099:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:118703-118844:-1:exon

PSMB4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PSMB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 130759..137865
location: region:130759-137865:1
so has part: feature:130759-137865:1:exon
subclass of: SO_0000010

118178293
type: Gene
SIO_000068: ncbigene

position:130759:1
position: 130759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137865:1
position: 137865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130759-137865:1:exon

PSMB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSMB4
product: proteasome 20S subunit beta 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035346697.1
SIO_010081: PSMB4
subclass of: SO_0000673
so part of: PSMB4
location: join(130759..130783,135212..135232,135367..135573,135919..136065,136631..136712,136804..136920,137468..137556,137729..137865)
location: region:130759-137865:1
so has part: feature:130759-130783:1:exon
so has part: feature:135212-135232:1:exon
so has part: feature:135367-135573:1:exon
so has part: feature:135919-136065:1:exon
so has part: feature:136631-136712:1:exon
so has part: feature:136804-136920:1:exon
so has part: feature:137468-137556:1:exon
so has part: feature:137729-137865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130759-130783:1:exon

position:130783:1
position: 130783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135212-135232:1:exon

position:135212:1
position: 135212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135232:1
position: 135232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135367-135573:1:exon

position:135367:1
position: 135367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135573:1
position: 135573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135919-136065:1:exon

position:135919:1
position: 135919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136065:1
position: 136065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136631-136712:1:exon

position:136631:1
position: 136631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136712:1
position: 136712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136804-136920:1:exon

position:136804:1
position: 136804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136920:1
position: 136920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:137468-137556:1:exon

position:137468:1
position: 137468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137556:1
position: 137556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:137729-137865:1:exon

position:137729:1
position: 137729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSMB4
product: proteasome 20S subunit beta 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035346696.1
SIO_010081: PSMB4
subclass of: SO_0000673
so part of: PSMB4
location: join(135071..135232,135367..135573,135919..136065,136631..136712,136804..136920,137468..137556,137729..137865)
location: region:135071-137865:1
so has part: feature:135071-135232:1:exon
so has part: feature:135367-135573:1:exon
so has part: feature:135919-136065:1:exon
so has part: feature:136631-136712:1:exon
so has part: feature:136804-136920:1:exon
so has part: feature:137468-137556:1:exon
so has part: feature:137729-137865:1:exon

position:135071:1
position: 135071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135071-135232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135367-135573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135919-136065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136631-136712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136804-136920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137468-137556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:137729-137865:1:exon

PSMB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSMB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-4 isoform X1
translation: MEAGGTRAPPPFWAGGPAPGQAYSPGGPGPIAGLQPLTQTTTPMVTGTSVLGVKFDGGVMLAADMMGSYGSLARFRNISRLLKVNDSTVLGASGDYADFQYLAQIIDQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKINPLWNTVVIGGYYNGESFLGYVDMLGVAYEAPTLATGYGAFLAQPLMREVLEKKPTLTKEEARSLIERCMKILYYRDARSFNRYEIATATEKGVEVEGPLTLEANWDIANLVSGFE
SIO_010081: PSMB4
subclass of: SO_0000673
so part of: PSMB4
location: join(135111..135232,135367..135573,135919..136065,136631..136712,136804..136920,137468..137556,137729..137741)
location: region:135111-137741:1
so has part: feature:135111-135232:1:exon
so has part: feature:135367-135573:1:exon
so has part: feature:135919-136065:1:exon
so has part: feature:136631-136712:1:exon
so has part: feature:136804-136920:1:exon
so has part: feature:137468-137556:1:exon
so has part: feature:137729-137741:1:exon

XP_035202587.1
type: Protein
SIO_000068: ncbiprotein

position:135111:1
position: 135111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137741:1
position: 137741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135111-135232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135367-135573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135919-136065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136631-136712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136804-136920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137468-137556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:137729-137741:1:exon

PSMB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSMB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-4 isoform X2
translation: MVTGTSVLGVKFDGGVMLAADMMGSYGSLARFRNISRLLKVNDSTVLGASGDYADFQYLAQIIDQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKINPLWNTVVIGGYYNGESFLGYVDMLGVAYEAPTLATGYGAFLAQPLMREVLEKKPTLTKEEARSLIERCMKILYYRDARSFNRYEIATATEKGVEVEGPLTLEANWDIANLVSGFE
SIO_010081: PSMB4
subclass of: SO_0000673
so part of: PSMB4
location: join(135374..135573,135919..136065,136631..136712,136804..136920,137468..137556,137729..137741)
location: region:135374-137741:1
so has part: feature:135374-135573:1:exon
so has part: feature:135919-136065:1:exon
so has part: feature:136631-136712:1:exon
so has part: feature:136804-136920:1:exon
so has part: feature:137468-137556:1:exon
so has part: feature:137729-137741:1:exon

XP_035202588.1
type: Protein
SIO_000068: ncbiprotein

position:135374:1
position: 135374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135374-135573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135919-136065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136631-136712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136804-136920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137468-137556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137729-137741:1:exon

POGZ
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: POGZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(139934..175744)
location: region:139934-175744:-1
so has part: feature:139934-175744:-1:exon
subclass of: SO_0000010

118178264
type: Gene
SIO_000068: ncbigene

position:139934:-1
position: 139934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175744:-1
position: 175744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139934-175744:-1:exon

POGZ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: POGZ
product: pogo transposable element derived with ZNF domain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035346641.1
SIO_010081: POGZ
subclass of: SO_0000673
so part of: POGZ
location: complement(join(139934..142770,142891..142915,143701..143813,144136..144195,144817..144957,145453..145622,146133..146264,147152..147298,148194..148294,148790..148944,149730..150064,150464..150573,150919..151125,151891..152184,153102..153210,154171..154346,164646..164770,175461..175744))
location: region:139934-175744:-1
so has part: feature:175461-175744:-1:exon
so has part: feature:164646-164770:-1:exon
so has part: feature:154171-154346:-1:exon
so has part: feature:153102-153210:-1:exon
so has part: feature:151891-152184:-1:exon
so has part: feature:150919-151125:-1:exon
so has part: feature:150464-150573:-1:exon
so has part: feature:149730-150064:-1:exon
so has part: feature:148790-148944:-1:exon
so has part: feature:148194-148294:-1:exon
so has part: feature:147152-147298:-1:exon
so has part: feature:146133-146264:-1:exon
so has part: feature:145453-145622:-1:exon
so has part: feature:144817-144957:-1:exon
so has part: feature:144136-144195:-1:exon
so has part: feature:143701-143813:-1:exon
so has part: feature:142891-142915:-1:exon
so has part: feature:139934-142770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175461-175744:-1:exon

position:175461:-1
position: 175461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164646-164770:-1:exon

position:164646:-1
position: 164646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164770:-1
position: 164770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154171-154346:-1:exon

position:154171:-1
position: 154171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154346:-1
position: 154346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153102-153210:-1:exon

position:153102:-1
position: 153102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153210:-1
position: 153210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151891-152184:-1:exon

position:151891:-1
position: 151891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152184:-1
position: 152184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150919-151125:-1:exon

position:150919:-1
position: 150919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151125:-1
position: 151125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:150464-150573:-1:exon

position:150464:-1
position: 150464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150573:-1
position: 150573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:149730-150064:-1:exon

position:149730:-1
position: 149730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150064:-1
position: 150064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:148790-148944:-1:exon

position:148790:-1
position: 148790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148944:-1
position: 148944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:148194-148294:-1:exon

position:148194:-1
position: 148194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148294:-1
position: 148294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:147152-147298:-1:exon

position:147152:-1
position: 147152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147298:-1
position: 147298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:146133-146264:-1:exon

position:146133:-1
position: 146133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146264:-1
position: 146264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:145453-145622:-1:exon

position:145453:-1
position: 145453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145622:-1
position: 145622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:144817-144957:-1:exon

position:144817:-1
position: 144817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144957:-1
position: 144957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:144136-144195:-1:exon

position:144136:-1
position: 144136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144195:-1
position: 144195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:143701-143813:-1:exon

position:143701:-1
position: 143701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143813:-1
position: 143813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:142891-142915:-1:exon

position:142891:-1
position: 142891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142915:-1
position: 142915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:139934-142770:-1:exon

position:142770:-1
position: 142770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POGZ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: POGZ
product: pogo transposable element derived with ZNF domain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035346640.1
SIO_010081: POGZ
subclass of: SO_0000673
so part of: POGZ
location: complement(join(139934..142770,142891..142915,143701..143813,144136..144195,144817..144957,145453..145622,146133..146267,147152..147298,148194..148294,148790..148944,149730..150064,150464..150573,150919..151125,151891..152184,153102..153210,154171..154346,164646..164770,175461..175744))
location: region:139934-175744:-1
so has part: feature:175461-175744:-1:exon
so has part: feature:164646-164770:-1:exon
so has part: feature:154171-154346:-1:exon
so has part: feature:153102-153210:-1:exon
so has part: feature:151891-152184:-1:exon
so has part: feature:150919-151125:-1:exon
so has part: feature:150464-150573:-1:exon
so has part: feature:149730-150064:-1:exon
so has part: feature:148790-148944:-1:exon
so has part: feature:148194-148294:-1:exon
so has part: feature:147152-147298:-1:exon
so has part: feature:146133-146267:-1:exon
so has part: feature:145453-145622:-1:exon
so has part: feature:144817-144957:-1:exon
so has part: feature:144136-144195:-1:exon
so has part: feature:143701-143813:-1:exon
so has part: feature:142891-142915:-1:exon
so has part: feature:139934-142770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175461-175744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164646-164770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154171-154346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153102-153210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151891-152184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150919-151125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150464-150573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149730-150064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148790-148944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148194-148294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147152-147298:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:146133-146267:-1:exon

position:146267:-1
position: 146267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:145453-145622:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:144817-144957:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144136-144195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:143701-143813:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:142891-142915:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:139934-142770:-1:exon

POGZ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: POGZ
product: pogo transposable element derived with ZNF domain, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_035346642.1
SIO_010081: POGZ
subclass of: SO_0000673
so part of: POGZ
location: complement(join(139934..142770,142891..142915,143701..143813,144136..144195,144817..144957,145453..145622,146133..146267,147152..147298,148194..148294,148790..148944,149730..150064,150464..150573,150919..151125,152005..152184,153102..153210,154171..154346,164646..164770,175461..175743))
location: region:139934-175743:-1
so has part: feature:175461-175743:-1:exon
so has part: feature:164646-164770:-1:exon
so has part: feature:154171-154346:-1:exon
so has part: feature:153102-153210:-1:exon
so has part: feature:152005-152184:-1:exon
so has part: feature:150919-151125:-1:exon
so has part: feature:150464-150573:-1:exon
so has part: feature:149730-150064:-1:exon
so has part: feature:148790-148944:-1:exon
so has part: feature:148194-148294:-1:exon
so has part: feature:147152-147298:-1:exon
so has part: feature:146133-146267:-1:exon
so has part: feature:145453-145622:-1:exon
so has part: feature:144817-144957:-1:exon
so has part: feature:144136-144195:-1:exon
so has part: feature:143701-143813:-1:exon
so has part: feature:142891-142915:-1:exon
so has part: feature:139934-142770:-1:exon

position:175743:-1
position: 175743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175461-175743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164646-164770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154171-154346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153102-153210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152005-152184:-1:exon

position:152005:-1
position: 152005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150919-151125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150464-150573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149730-150064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148790-148944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148194-148294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147152-147298:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:146133-146267:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145453-145622:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:144817-144957:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144136-144195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:143701-143813:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:142891-142915:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:139934-142770:-1:exon

POGZ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: POGZ
product: pogo transposable element derived with ZNF domain, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_035346643.1
SIO_010081: POGZ
subclass of: SO_0000673
so part of: POGZ
location: complement(join(139934..142770,142891..142915,143701..143813,144136..144195,144817..144957,145453..145622,146133..146267,147152..147298,148194..148294,148790..148944,149730..150064,150464..150573,150919..151125,151891..152184,153102..153210,154171..154346,159169..159406,164646..164772))
location: region:139934-164772:-1
so has part: feature:164646-164772:-1:exon
so has part: feature:159169-159406:-1:exon
so has part: feature:154171-154346:-1:exon
so has part: feature:153102-153210:-1:exon
so has part: feature:151891-152184:-1:exon
so has part: feature:150919-151125:-1:exon
so has part: feature:150464-150573:-1:exon
so has part: feature:149730-150064:-1:exon
so has part: feature:148790-148944:-1:exon
so has part: feature:148194-148294:-1:exon
so has part: feature:147152-147298:-1:exon
so has part: feature:146133-146267:-1:exon
so has part: feature:145453-145622:-1:exon
so has part: feature:144817-144957:-1:exon
so has part: feature:144136-144195:-1:exon
so has part: feature:143701-143813:-1:exon
so has part: feature:142891-142915:-1:exon
so has part: feature:139934-142770:-1:exon

position:164772:-1
position: 164772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164646-164772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159169-159406:-1:exon

position:159169:-1
position: 159169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159406:-1
position: 159406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154171-154346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153102-153210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151891-152184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150919-151125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150464-150573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149730-150064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148790-148944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148194-148294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147152-147298:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:146133-146267:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145453-145622:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:144817-144957:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144136-144195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:143701-143813:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:142891-142915:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:139934-142770:-1:exon

POGZ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: POGZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pogo transposable element with ZNF domain isoform X3
translation: MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTATAGNPLVQQGGQPLILTQNPASGLGTMVTQPVLRPVQIMQNANHVTNSPVTSQPIFITTQGFPVRNVRPVQNTMNQVGIVLNVQQGQTVRPITLVPAPGTQFVKPTVGVPQVFSQMAQVRPGTTMPVRPTTNTFTTVIPATLTIRSTVPQSQAQQQMSIASFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPLVVSNSSPVHGSQRSSVSESSSSSSSLKVSSSPIPTFDLQDGGRKVCPRCDAQFRVTEALRGHMCYCCPEMVEFLKKRKSLDSEPNIQSAKPPSPEKTTAVASPPSSTPIPALSPPAKAPEPSENVVDSSQSKLIMLVDDFYYGRDGGKVSQLLNFPKVPTSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDVHTICQHCYRQFSTPFQLQCHLENVHSPYESTTKCKICEWAFESEPMFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDSHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHFMRHQKKSVYHCNKCRLQFLFAKDKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPISSNDMQGTGQDTTPLSSSTDPQPIFLYPPVQRNVQKRAVKKMSVLGRQTCLECSFEIPDFPNHFPTYVHCSQCRYSTCCSRAYANHMINNHVPRKSPKYLALFKNYTACGVKLSCSSCLFVTSEGDAMAKHLVFNPSHEFSNIIFRGPSWISHSRHVQPQDKSMKNTCSSYSPSKAATVKTKSMLPAKDDLEPELAPAAYNRPLVCQEEECLNIDAQEDEQPTKEPEPASKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIKRWLRRFQAFQEENLASLSEGKYLSLEAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHNLSTHTRRAVAHPLPKDVEDNASCFIEFVQRQIHTQDLPLSMIAAIDEISLFLDVEVLSSDDRKENALQTVGTGDPWCDVVLTILADGSVLPTLVFYRGHVQQPANVPESIMLEAKENGYSDDEVMELWATRVWQKHTECQNSKGMLVLDCHRTHLSEEVLSLLSASSTLPAVVPAGCSSKIQPLDVCIKRTVKNFLHKKWKEQAKEMADSTCDSDILLQLVLCWLAEVLEVISDSPELVQQSFLVASVLPGPDGTANSPTRNADMQEELIASLEEQLKLNGEQQQQQQQQAVTEVQDRTQAEESADPEILHQLFEGESETESFYGFEDADLDLMEI
SIO_010081: POGZ
subclass of: SO_0000673
so part of: POGZ
location: complement(join(141186..142770,142891..142915,143701..143813,144136..144195,144817..144957,145453..145622,146133..146267,147152..147298,148194..148294,148790..148944,149730..150064,150464..150573,150919..151125,152005..152184,153102..153210,154171..154346,164646..164769))
location: region:141186-164769:-1
so has part: feature:164646-164769:-1:exon
so has part: feature:154171-154346:-1:exon
so has part: feature:153102-153210:-1:exon
so has part: feature:152005-152184:-1:exon
so has part: feature:150919-151125:-1:exon
so has part: feature:150464-150573:-1:exon
so has part: feature:149730-150064:-1:exon
so has part: feature:148790-148944:-1:exon
so has part: feature:148194-148294:-1:exon
so has part: feature:147152-147298:-1:exon
so has part: feature:146133-146267:-1:exon
so has part: feature:145453-145622:-1:exon
so has part: feature:144817-144957:-1:exon
so has part: feature:144136-144195:-1:exon
so has part: feature:143701-143813:-1:exon
so has part: feature:142891-142915:-1:exon
so has part: feature:141186-142770:-1:exon

XP_035202533.1
type: Protein
SIO_000068: ncbiprotein

position:141186:-1
position: 141186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164769:-1
position: 164769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164646-164769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154171-154346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153102-153210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152005-152184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150919-151125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150464-150573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149730-150064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148790-148944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148194-148294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147152-147298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:146133-146267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145453-145622:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:144817-144957:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:144136-144195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:143701-143813:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:142891-142915:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:141186-142770:-1:exon

POGZ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: POGZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pogo transposable element with ZNF domain isoform X2
translation: MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTATAGNPLVQQGGQPLILTQNPASGLGTMVTQPVLRPVQIMQNANHVTNSPVTSQPIFITTQGFPVRNVRPVQNTMNQVGIVLNVQQGQTVRPITLVPAPGTQFVKPTVGVPQVFSQMAQVRPGTTMPVRPTTNTFTTVIPATLTIRSTVPQSQAQQQSKSTPSTSTTPTSTQPTTLGQLTVQQPGQSSQATNPKLVSIASFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPLVVSNSSPVHGSQRSSVSESSSSSSSLKVSSSPIPTFDLQDGGRKVCPRCDAQFRVTEALRGHMCYCCPEMVEFLKKRKSLDSEPNIQSAKPPSPEKTTAVASPPSSTPIPALSPPAKAPEPSENVVDSSQSKLIMLVDDFYYGRDGGKVSQLLNFPKVPTSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDVHTICQHCYRQFSTPFQLQCHLENVHSPYESTTKCKICEWAFESEPMFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDSHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHFMRHQKSVYHCNKCRLQFLFAKDKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPISSNDMQGTGQDTTPLSSSTDPQPIFLYPPVQRNVQKRAVKKMSVLGRQTCLECSFEIPDFPNHFPTYVHCSQCRYSTCCSRAYANHMINNHVPRKSPKYLALFKNYTACGVKLSCSSCLFVTSEGDAMAKHLVFNPSHEFSNIIFRGPSWISHSRHVQPQDKSMKNTCSSYSPSKAATVKTKSMLPAKDDLEPELAPAAYNRPLVCQEEECLNIDAQEDEQPTKEPEPASKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIKRWLRRFQAFQEENLASLSEGKYLSLEAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHNLSTHTRRAVAHPLPKDVEDNASCFIEFVQRQIHTQDLPLSMIAAIDEISLFLDVEVLSSDDRKENALQTVGTGDPWCDVVLTILADGSVLPTLVFYRGHVQQPANVPESIMLEAKENGYSDDEVMELWATRVWQKHTECQNSKGMLVLDCHRTHLSEEVLSLLSASSTLPAVVPAGCSSKIQPLDVCIKRTVKNFLHKKWKEQAKEMADSTCDSDILLQLVLCWLAEVLEVISDSPELVQQSFLVASVLPGPDGTANSPTRNADMQEELIASLEEQLKLNGEQQQQQQQQAVTEVQDRTQAEESADPEILHQLFEGESETESFYGFEDADLDLMEI
SIO_010081: POGZ
subclass of: SO_0000673
so part of: POGZ
location: complement(join(141186..142770,142891..142915,143701..143813,144136..144195,144817..144957,145453..145622,146133..146264,147152..147298,148194..148294,148790..148944,149730..150064,150464..150573,150919..151125,151891..152184,153102..153210,154171..154346,164646..164769))
location: region:141186-164769:-1
so has part: feature:164646-164769:-1:exon
so has part: feature:154171-154346:-1:exon
so has part: feature:153102-153210:-1:exon
so has part: feature:151891-152184:-1:exon
so has part: feature:150919-151125:-1:exon
so has part: feature:150464-150573:-1:exon
so has part: feature:149730-150064:-1:exon
so has part: feature:148790-148944:-1:exon
so has part: feature:148194-148294:-1:exon
so has part: feature:147152-147298:-1:exon
so has part: feature:146133-146264:-1:exon
so has part: feature:145453-145622:-1:exon
so has part: feature:144817-144957:-1:exon
so has part: feature:144136-144195:-1:exon
so has part: feature:143701-143813:-1:exon
so has part: feature:142891-142915:-1:exon
so has part: feature:141186-142770:-1:exon

XP_035202532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164646-164769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154171-154346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153102-153210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151891-152184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150919-151125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150464-150573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149730-150064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148790-148944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148194-148294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147152-147298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:146133-146264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145453-145622:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:144817-144957:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:144136-144195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:143701-143813:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:142891-142915:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:141186-142770:-1:exon

POGZ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: POGZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pogo transposable element with ZNF domain isoform X1
translation: MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTATAGNPLVQQGGQPLILTQNPASGLGTMVTQPVLRPVQIMQNANHVTNSPVTSQPIFITTQGFPVRNVRPVQNTMNQVGIVLNVQQGQTVRPITLVPAPGTQFVKPTVGVPQVFSQMAQVRPGTTMPVRPTTNTFTTVIPATLTIRSTVPQSQAQQQSKSTPSTSTTPTSTQPTTLGQLTVQQPGQSSQATNPKLVSIASFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPLVVSNSSPVHGSQRSSVSESSSSSSSLKVSSSPIPTFDLQDGGRKVCPRCDAQFRVTEALRGHMCYCCPEMVEFLKKRKSLDSEPNIQSAKPPSPEKTTAVASPPSSTPIPALSPPAKAPEPSENVVDSSQSKLIMLVDDFYYGRDGGKVSQLLNFPKVPTSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDVHTICQHCYRQFSTPFQLQCHLENVHSPYESTTKCKICEWAFESEPMFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDSHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHFMRHQKKSVYHCNKCRLQFLFAKDKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPISSNDMQGTGQDTTPLSSSTDPQPIFLYPPVQRNVQKRAVKKMSVLGRQTCLECSFEIPDFPNHFPTYVHCSQCRYSTCCSRAYANHMINNHVPRKSPKYLALFKNYTACGVKLSCSSCLFVTSEGDAMAKHLVFNPSHEFSNIIFRGPSWISHSRHVQPQDKSMKNTCSSYSPSKAATVKTKSMLPAKDDLEPELAPAAYNRPLVCQEEECLNIDAQEDEQPTKEPEPASKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIKRWLRRFQAFQEENLASLSEGKYLSLEAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHNLSTHTRRAVAHPLPKDVEDNASCFIEFVQRQIHTQDLPLSMIAAIDEISLFLDVEVLSSDDRKENALQTVGTGDPWCDVVLTILADGSVLPTLVFYRGHVQQPANVPESIMLEAKENGYSDDEVMELWATRVWQKHTECQNSKGMLVLDCHRTHLSEEVLSLLSASSTLPAVVPAGCSSKIQPLDVCIKRTVKNFLHKKWKEQAKEMADSTCDSDILLQLVLCWLAEVLEVISDSPELVQQSFLVASVLPGPDGTANSPTRNADMQEELIASLEEQLKLNGEQQQQQQQQAVTEVQDRTQAEESADPEILHQLFEGESETESFYGFEDADLDLMEI
SIO_010081: POGZ
subclass of: SO_0000673
so part of: POGZ
location: complement(join(141186..142770,142891..142915,143701..143813,144136..144195,144817..144957,145453..145622,146133..146267,147152..147298,148194..148294,148790..148944,149730..150064,150464..150573,150919..151125,151891..152184,153102..153210,154171..154346,164646..164769))
location: region:141186-164769:-1
so has part: feature:164646-164769:-1:exon
so has part: feature:154171-154346:-1:exon
so has part: feature:153102-153210:-1:exon
so has part: feature:151891-152184:-1:exon
so has part: feature:150919-151125:-1:exon
so has part: feature:150464-150573:-1:exon
so has part: feature:149730-150064:-1:exon
so has part: feature:148790-148944:-1:exon
so has part: feature:148194-148294:-1:exon
so has part: feature:147152-147298:-1:exon
so has part: feature:146133-146267:-1:exon
so has part: feature:145453-145622:-1:exon
so has part: feature:144817-144957:-1:exon
so has part: feature:144136-144195:-1:exon
so has part: feature:143701-143813:-1:exon
so has part: feature:142891-142915:-1:exon
so has part: feature:141186-142770:-1:exon

XP_035202531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164646-164769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154171-154346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153102-153210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151891-152184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150919-151125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150464-150573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149730-150064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148790-148944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148194-148294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147152-147298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:146133-146267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145453-145622:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:144817-144957:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:144136-144195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:143701-143813:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:142891-142915:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:141186-142770:-1:exon

POGZ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: POGZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pogo transposable element with ZNF domain isoform X4
translation: MVTQPVLRPVQIMQNANHVTNSPVTSQPIFITTQGFPVRNVRPVQNTMNQVGIVLNVQQGQTVRPITLVPAPGTQFVKPTVGVPQVFSQMAQVRPGTTMPVRPTTNTFTTVIPATLTIRSTVPQSQAQQQSKSTPSTSTTPTSTQPTTLGQLTVQQPGQSSQATNPKLVSIASFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPLVVSNSSPVHGSQRSSVSESSSSSSSLKVSSSPIPTFDLQDGGRKVCPRCDAQFRVTEALRGHMCYCCPEMVEFLKKRKSLDSEPNIQSAKPPSPEKTTAVASPPSSTPIPALSPPAKAPEPSENVVDSSQSKLIMLVDDFYYGRDGGKVSQLLNFPKVPTSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDVHTICQHCYRQFSTPFQLQCHLENVHSPYESTTKCKICEWAFESEPMFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDSHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHFMRHQKKSVYHCNKCRLQFLFAKDKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPISSNDMQGTGQDTTPLSSSTDPQPIFLYPPVQRNVQKRAVKKMSVLGRQTCLECSFEIPDFPNHFPTYVHCSQCRYSTCCSRAYANHMINNHVPRKSPKYLALFKNYTACGVKLSCSSCLFVTSEGDAMAKHLVFNPSHEFSNIIFRGPSWISHSRHVQPQDKSMKNTCSSYSPSKAATVKTKSMLPAKDDLEPELAPAAYNRPLVCQEEECLNIDAQEDEQPTKEPEPASKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIKRWLRRFQAFQEENLASLSEGKYLSLEAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHNLSTHTRRAVAHPLPKDVEDNASCFIEFVQRQIHTQDLPLSMIAAIDEISLFLDVEVLSSDDRKENALQTVGTGDPWCDVVLTILADGSVLPTLVFYRGHVQQPANVPESIMLEAKENGYSDDEVMELWATRVWQKHTECQNSKGMLVLDCHRTHLSEEVLSLLSASSTLPAVVPAGCSSKIQPLDVCIKRTVKNFLHKKWKEQAKEMADSTCDSDILLQLVLCWLAEVLEVISDSPELVQQSFLVASVLPGPDGTANSPTRNADMQEELIASLEEQLKLNGEQQQQQQQQAVTEVQDRTQAEESADPEILHQLFEGESETESFYGFEDADLDLMEI
SIO_010081: POGZ
subclass of: SO_0000673
so part of: POGZ
location: complement(join(141186..142770,142891..142915,143701..143813,144136..144195,144817..144957,145453..145622,146133..146267,147152..147298,148194..148294,148790..148944,149730..150064,150464..150573,150919..151125,151891..152184,153102..153210,154171..154272))
location: region:141186-154272:-1
so has part: feature:154171-154272:-1:exon
so has part: feature:153102-153210:-1:exon
so has part: feature:151891-152184:-1:exon
so has part: feature:150919-151125:-1:exon
so has part: feature:150464-150573:-1:exon
so has part: feature:149730-150064:-1:exon
so has part: feature:148790-148944:-1:exon
so has part: feature:148194-148294:-1:exon
so has part: feature:147152-147298:-1:exon
so has part: feature:146133-146267:-1:exon
so has part: feature:145453-145622:-1:exon
so has part: feature:144817-144957:-1:exon
so has part: feature:144136-144195:-1:exon
so has part: feature:143701-143813:-1:exon
so has part: feature:142891-142915:-1:exon
so has part: feature:141186-142770:-1:exon

XP_035202534.1
type: Protein
SIO_000068: ncbiprotein

position:154272:-1
position: 154272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154171-154272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153102-153210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151891-152184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150919-151125:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150464-150573:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149730-150064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148790-148944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148194-148294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147152-147298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:146133-146267:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:145453-145622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:144817-144957:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:144136-144195:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:143701-143813:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:142891-142915:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:141186-142770:-1:exon

LOC118178187
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118178187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 183368..197009
location: region:183368-197009:1
so has part: feature:183368-197009:1:exon
subclass of: SO_0000010

118178187
type: Gene
SIO_000068: ncbigene

position:183368:1
position: 183368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197009:1
position: 197009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183368-197009:1:exon

LOC118178187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178187
product: methanethiol oxidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_035346494.1
SIO_010081: LOC118178187
subclass of: SO_0000673
so part of: LOC118178187
location: join(183368..183633,183748..183831,188199..188252,189038..189150,190370..190555,192087..192207,192375..192557,192653..192831,193522..193600,194104..194225,194393..194485,195519..195637,196267..197009)
location: region:183368-197009:1
so has part: feature:183368-183633:1:exon
so has part: feature:183748-183831:1:exon
so has part: feature:188199-188252:1:exon
so has part: feature:189038-189150:1:exon
so has part: feature:190370-190555:1:exon
so has part: feature:192087-192207:1:exon
so has part: feature:192375-192557:1:exon
so has part: feature:192653-192831:1:exon
so has part: feature:193522-193600:1:exon
so has part: feature:194104-194225:1:exon
so has part: feature:194393-194485:1:exon
so has part: feature:195519-195637:1:exon
so has part: feature:196267-197009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183368-183633:1:exon

position:183633:1
position: 183633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183748-183831:1:exon

position:183748:1
position: 183748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183831:1
position: 183831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188199-188252:1:exon

position:188199:1
position: 188199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188252:1
position: 188252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189038-189150:1:exon

position:189038:1
position: 189038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189150:1
position: 189150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:190370-190555:1:exon

position:190370:1
position: 190370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190555:1
position: 190555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:192087-192207:1:exon

position:192087:1
position: 192087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192207:1
position: 192207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:192375-192557:1:exon

position:192375:1
position: 192375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192557:1
position: 192557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:192653-192831:1:exon

position:192653:1
position: 192653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192831:1
position: 192831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:193522-193600:1:exon

position:193522:1
position: 193522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193600:1
position: 193600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:194104-194225:1:exon

position:194104:1
position: 194104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194225:1
position: 194225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:194393-194485:1:exon

position:194393:1
position: 194393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194485:1
position: 194485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:195519-195637:1:exon

position:195519:1
position: 195519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195637:1
position: 195637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:196267-197009:1:exon

position:196267:1
position: 196267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118178187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methanethiol oxidase-like
translation: MAKCGACGPGYATPLDAMKGPREEILYLPCIYRNTGIEKPDYLATVDVDPKSPHYCQVIHRLPMPNLKDELHHSGWNACSSCFGDATKRRNRLILPSLISSRIYVVDVGTDSKAPRIHKIVEPVELFWKGNVANPHTSHCLGSGDILISCLGDPSGNGKGGFILLDGETFEVKGNWEKGEKVPPLGYDFWYQPRHNVLMSTEWGTPKVLVDGFNPADVEKGHYGRHINVWDWNSRTYIQKIDLGKDSIPLEIRFLHNPDAAEGFVGCALNSTVHRFYKTEKGNWAAEKVIEVPSKKVQGWLLPDMPGLITDILISLDDRFLYFSNWLHGDIRQYDISNTRKPRLVGQVFLGGSIVKGGPVTVVEDKELQCQPEPFVIKGKRVPGGPQMIQLSLDGKRLYVTSSLYSGWDKQFYPDLVKEGSVMLQIDVDTERGGLKVNKNFLVDFGKEPDGPVLAHEIRYPGGDSTSDIWI
SIO_010081: LOC118178187
subclass of: SO_0000673
so part of: LOC118178187
location: join(183828..183831,188199..188252,189038..189150,190370..190555,192087..192207,192375..192557,192653..192831,193522..193600,194104..194225,194393..194485,195519..195637,196267..196429)
location: region:183828-196429:1
so has part: feature:183828-183831:1:exon
so has part: feature:188199-188252:1:exon
so has part: feature:189038-189150:1:exon
so has part: feature:190370-190555:1:exon
so has part: feature:192087-192207:1:exon
so has part: feature:192375-192557:1:exon
so has part: feature:192653-192831:1:exon
so has part: feature:193522-193600:1:exon
so has part: feature:194104-194225:1:exon
so has part: feature:194393-194485:1:exon
so has part: feature:195519-195637:1:exon
so has part: feature:196267-196429:1:exon

XP_035202385.1
type: Protein
SIO_000068: ncbiprotein

position:183828:1
position: 183828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196429:1
position: 196429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183828-183831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188199-188252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189038-189150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190370-190555:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192087-192207:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192375-192557:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192653-192831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193522-193600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194104-194225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194393-194485:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:195519-195637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:196267-196429:1:exon

LOC118178185
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118178185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 198953..206033
location: region:198953-206033:1
so has part: feature:198953-206033:1:exon
subclass of: SO_0000010

118178185
type: Gene
SIO_000068: ncbigene

position:198953:1
position: 198953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206033:1
position: 206033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198953-206033:1:exon

LOC118178185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178185
product: methanethiol oxidase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035346489.1
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(198953..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204956,205123..205241,205325..206033)
location: region:198953-206033:1
so has part: feature:198953-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204956:1:exon
so has part: feature:205123-205241:1:exon
so has part: feature:205325-206033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198953-199238:1:exon

position:199238:1
position: 199238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

position:200996:1
position: 200996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201049:1
position: 201049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

position:202172:1
position: 202172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202284:1
position: 202284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

position:202632:1
position: 202632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202817:1
position: 202817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

position:202985:1
position: 202985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203105:1
position: 203105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

position:203300:1
position: 203300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203482:1
position: 203482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

position:203837:1
position: 203837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204015:1
position: 204015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204956:1:exon

position:204482:1
position: 204482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204956:1
position: 204956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:205123-205241:1:exon

position:205123:1
position: 205123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205241:1
position: 205241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:205325-206033:1:exon

position:205325:1
position: 205325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118178185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178185
product: methanethiol oxidase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035346488.1
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(198953..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204560,204643..205241,205325..206033)
location: region:198953-206033:1
so has part: feature:198953-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204560:1:exon
so has part: feature:204643-205241:1:exon
so has part: feature:205325-206033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198953-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204560:1:exon

position:204560:1
position: 204560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:204643-205241:1:exon

position:204643:1
position: 204643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:205325-206033:1:exon

LOC118178185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178185
product: methanethiol oxidase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035346490.1
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(198954..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204560,204643..204764,204864..205241,205325..206033)
location: region:198954-206033:1
so has part: feature:198954-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204560:1:exon
so has part: feature:204643-204764:1:exon
so has part: feature:204864-205241:1:exon
so has part: feature:205325-206033:1:exon

position:198954:1
position: 198954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198954-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204643-204764:1:exon

position:204764:1
position: 204764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:204864-205241:1:exon

position:204864:1
position: 204864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:205325-206033:1:exon

LOC118178185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178185
product: methanethiol oxidase-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035346491.1
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(198955..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204764,204864..204956,205123..205241,205325..206033)
location: region:198955-206033:1
so has part: feature:198955-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204764:1:exon
so has part: feature:204864-204956:1:exon
so has part: feature:205123-205241:1:exon
so has part: feature:205325-206033:1:exon

position:198955:1
position: 198955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198955-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204864-204956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205123-205241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205325-206033:1:exon

LOC118178185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178185
product: methanethiol oxidase-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035346492.1
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(198956..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204560,204643..204956,205123..205241,205325..205636)
location: region:198956-205636:1
so has part: feature:198956-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204560:1:exon
so has part: feature:204643-204956:1:exon
so has part: feature:205123-205241:1:exon
so has part: feature:205325-205636:1:exon

position:198956:1
position: 198956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205636:1
position: 205636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198956-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204643-204956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205123-205241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205325-205636:1:exon

LOC118178185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178185
product: methanethiol oxidase-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035346493.1
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(198959..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204560,204643..204764,204864..204956,205123..205241,205325..205636)
location: region:198959-205636:1
so has part: feature:198959-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204560:1:exon
so has part: feature:204643-204764:1:exon
so has part: feature:204864-204956:1:exon
so has part: feature:205123-205241:1:exon
so has part: feature:205325-205636:1:exon

position:198959:1
position: 198959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198959-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204643-204764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204864-204956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205123-205241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205325-205636:1:exon

LOC118178185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118178185 isoform X2
translation: MQAGSPPSASHQQVKSSSTASSTERCGACGPGFASPLDAMKGPREEILYVPCIYRNTGRNKPDFLATVDVNPESPNYCQVIHRLPMPNVGDELHHSGWNTCSSCFGDTTKKRNRLILPSLISSRIYVVDVGTDPRAPRLFKVVNSEDVFWKCNLGYPHTSHCLGSGEIMISTLGDPAGNGKGGFILLDGETFEIKGNWEKGDKSPPMGYDFWYQPRHNVLISTEWGVPKCLGYGFDPNDLKKGCYGRRLNVWDWTTHTYVQAIDVGEDAAPLEIRFLHNPDAAEGFVGCTISSAIHRFYRTERGDWAAEKVIQVPSKKVEGWLLPDMPGECVPVSRGAAACPGLPQVCNSAVPFPRLHHRHPHLAGRQVPLLQQLAARRRPPVRHLRHPQAQAGGTGKAAPACPLLLPHLGVGPAPLPRLGHPELRSLAGLCGWQHRQGRDRGRVWGRGAAEPAGSLCHPGQEGVGGAPDDPAQPGWEAAVRHHVPLQRLGPAVLPAAHQGWLCHAAARCGHREGWPDRQPELPGGFREGAGRALPGARDPLPWRGLHLRHLGLAAPGLACGHPPLPSLLMDALPKSRLCQWPDLPQCLRHLGHNGMAKLEIPLLSLSRSPPPCQRHRNPASCTSHLTTCTLHPTSPILHLTPHI
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(199169..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204956,205123..205241,205325..205762)
location: region:199169-205762:1
so has part: feature:199169-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204956:1:exon
so has part: feature:205123-205241:1:exon
so has part: feature:205325-205762:1:exon

XP_035202380.1
type: Protein
SIO_000068: ncbiprotein

position:199169:1
position: 199169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205762:1
position: 205762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199169-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204956:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:205123-205241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205325-205762:1:exon

LOC118178185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118178185 isoform X4
translation: MQAGSPPSASHQQVKSSSTASSTERCGACGPGFASPLDAMKGPREEILYVPCIYRNTGRNKPDFLATVDVNPESPNYCQVIHRLPMPNVGDELHHSGWNTCSSCFGDTTKKRNRLILPSLISSRIYVVDVGTDPRAPRLFKVVNSEDVFWKCNLGYPHTSHCLGSGEIMISTLGDPAGNGKGGFILLDGETFEIKGNWEKGDKSPPMGYDFWYQPRHNVLISTEWGVPKCLGYGFDPNDLKKGCYGRRLNVWDWTTHTYVQAIDVGEDAAPLEIRFLHNPDAAEGFVGCTISSAIHRFYRTERGDWAAEKVIQVPSKKVEGWLLPDMPGECVPVSRGAAACPGLPQVCNSAVPFPRLHHRHPHLAGRQVPLLQQLAARRRPPVRHLRHPQAQAGGTGLCGWQHRQGRDRGRVWGRGAAEPAGSLCHPGQEGVGGAPDDPAQPGWEAAVRHHVPLQRLGPAVLPAAHQGWLCHAAARCGHREGWPDRQPELPGGFREGAGRALPGARDPLPWRGLHLRHLGLAAPGLACGHPPLPSLLMDALPKSRLCQWPDLPQCLRHLGHNGMAKLEIPLLSLSRSPPPCQRHRNPASCTSHLTTCTLHPTSPILHLTPHI
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(199169..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204764,204864..204956,205123..205241,205325..205762)
location: region:199169-205762:1
so has part: feature:199169-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204764:1:exon
so has part: feature:204864-204956:1:exon
so has part: feature:205123-205241:1:exon
so has part: feature:205325-205762:1:exon

XP_035202382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199169-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204864-204956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205123-205241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205325-205762:1:exon

LOC118178185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methanethiol oxidase-like isoform X1
translation: MQAGSPPSASHQQVKSSSTASSTERCGACGPGFASPLDAMKGPREEILYVPCIYRNTGRNKPDFLATVDVNPESPNYCQVIHRLPMPNVGDELHHSGWNTCSSCFGDTTKKRNRLILPSLISSRIYVVDVGTDPRAPRLFKVVNSEDVFWKCNLGYPHTSHCLGSGEIMISTLGDPAGNGKGGFILLDGETFEIKGNWEKGDKSPPMGYDFWYQPRHNVLISTEWGVPKCLGYGFDPNDLKKGCYGRRLNVWDWTTHTYVQAIDVGEDAAPLEIRFLHNPDAAEGFVGCTISSAIHRFYRTERGDWAAEKVIQVPSKKVEGWLLPDMPGFITDILISLDDRFLYFSNWLHGDVRQYDISDTRRPRLVGQVRQHRRARYFCPISGWDQPRFPVSATPSSALSQVFVGGSIAKGGTVAVCGDEELQSQPDPFVIQVSSALRRPISALSLQARGAAGASPGSRSQCFCSSGPARCRWRRPLLTSSSPPPAAGQEGVGGAPDDPAQPGWEAAVRHHVPLQRLGPAVLPAAHQGWLCHAAARCGHREGWPDRQPELPGGFREGAGRALPGARDPLPWRGLHLRHLGLAAPGLACGHPPLPSLLMDALPKSRLCQWPDLPQCLRHLGHNGMAKLEIPLLSLSRSPPPCQRHRNPASCTSHLTTCTLHPTSPILHLTPHI
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(199169..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204560,204643..205241,205325..205762)
location: region:199169-205762:1
so has part: feature:199169-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204560:1:exon
so has part: feature:204643-205241:1:exon
so has part: feature:205325-205762:1:exon

XP_035202379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199169-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204643-205241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205325-205762:1:exon

LOC118178185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methanethiol oxidase-like isoform X3
translation: MQAGSPPSASHQQVKSSSTASSTERCGACGPGFASPLDAMKGPREEILYVPCIYRNTGRNKPDFLATVDVNPESPNYCQVIHRLPMPNVGDELHHSGWNTCSSCFGDTTKKRNRLILPSLISSRIYVVDVGTDPRAPRLFKVVNSEDVFWKCNLGYPHTSHCLGSGEIMISTLGDPAGNGKGGFILLDGETFEIKGNWEKGDKSPPMGYDFWYQPRHNVLISTEWGVPKCLGYGFDPNDLKKGCYGRRLNVWDWTTHTYVQAIDVGEDAAPLEIRFLHNPDAAEGFVGCTISSAIHRFYRTERGDWAAEKVIQVPSKKVEGWLLPDMPGFITDILISLDDRFLYFSNWLHGDVRQYDISDTRRPRLVGQVFVGGSIAKGGTVAVCGDEELQSQPDPFVIQVSSALRRPISALSLQARGAAGASPGSRSQCFCSSGPARCRWRRPLLTSSSPPPAAGQEGVGGAPDDPAQPGWEAAVRHHVPLQRLGPAVLPAAHQGWLCHAAARCGHREGWPDRQPELPGGFREGAGRALPGARDPLPWRGLHLRHLGLAAPGLACGHPPLPSLLMDALPKSRLCQWPDLPQCLRHLGHNGMAKLEIPLLSLSRSPPPCQRHRNPASCTSHLTTCTLHPTSPILHLTPHI
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(199169..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204560,204643..204764,204864..205241,205325..205762)
location: region:199169-205762:1
so has part: feature:199169-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204560:1:exon
so has part: feature:204643-204764:1:exon
so has part: feature:204864-205241:1:exon
so has part: feature:205325-205762:1:exon

XP_035202381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199169-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204643-204764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204864-205241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205325-205762:1:exon

LOC118178185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methanethiol oxidase-like isoform X5
translation: MQAGSPPSASHQQVKSSSTASSTERCGACGPGFASPLDAMKGPREEILYVPCIYRNTGRNKPDFLATVDVNPESPNYCQVIHRLPMPNVGDELHHSGWNTCSSCFGDTTKKRNRLILPSLISSRIYVVDVGTDPRAPRLFKVVNSEDVFWKCNLGYPHTSHCLGSGEIMISTLGDPAGNGKGGFILLDGETFEIKGNWEKGDKSPPMGYDFWYQPRHNVLISTEWGVPKCLGYGFDPNDLKKGCYGRRLNVWDWTTHTYVQAIDVGEDAAPLEIRFLHNPDAAEGFVGCTISSAIHRFYRTERGDWAAEKVIQVPSKKVEGWLLPDMPGFITDILISLDDRFLYFSNWLHGDVRQYDISDTRRPRLVGQVRQHRRARYFCPISGWDQPRFPVSATPSSALSQVFVGGSIAKGGTVAVCGDEELQSQPDPFVIQGKRVSGGPQMIQLSLDGKRLYVTTSLYSAWDRQFYPQLIRDGSVMLQLDVDTEKGGLTVNQNFLVDFGKEPGGPCLAHEIRYPGGDCTSDIWV
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(199169..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204560,204643..204956,205123..205241,205325..205487)
location: region:199169-205487:1
so has part: feature:199169-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204560:1:exon
so has part: feature:204643-204956:1:exon
so has part: feature:205123-205241:1:exon
so has part: feature:205325-205487:1:exon

XP_035202383.1
type: Protein
SIO_000068: ncbiprotein

position:205487:1
position: 205487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199169-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204643-204956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205123-205241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205325-205487:1:exon

LOC118178185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methanethiol oxidase-like isoform X6
translation: MQAGSPPSASHQQVKSSSTASSTERCGACGPGFASPLDAMKGPREEILYVPCIYRNTGRNKPDFLATVDVNPESPNYCQVIHRLPMPNVGDELHHSGWNTCSSCFGDTTKKRNRLILPSLISSRIYVVDVGTDPRAPRLFKVVNSEDVFWKCNLGYPHTSHCLGSGEIMISTLGDPAGNGKGGFILLDGETFEIKGNWEKGDKSPPMGYDFWYQPRHNVLISTEWGVPKCLGYGFDPNDLKKGCYGRRLNVWDWTTHTYVQAIDVGEDAAPLEIRFLHNPDAAEGFVGCTISSAIHRFYRTERGDWAAEKVIQVPSKKVEGWLLPDMPGFITDILISLDDRFLYFSNWLHGDVRQYDISDTRRPRLVGQVFVGGSIAKGGTVAVCGDEELQSQPDPFVIQGKRVSGGPQMIQLSLDGKRLYVTTSLYSAWDRQFYPQLIRDGSVMLQLDVDTEKGGLTVNQNFLVDFGKEPGGPCLAHEIRYPGGDCTSDIWV
SIO_010081: LOC118178185
subclass of: SO_0000673
so part of: LOC118178185
location: join(199169..199238,200996..201049,202172..202284,202632..202817,202985..203105,203300..203482,203837..204015,204482..204560,204643..204764,204864..204956,205123..205241,205325..205487)
location: region:199169-205487:1
so has part: feature:199169-199238:1:exon
so has part: feature:200996-201049:1:exon
so has part: feature:202172-202284:1:exon
so has part: feature:202632-202817:1:exon
so has part: feature:202985-203105:1:exon
so has part: feature:203300-203482:1:exon
so has part: feature:203837-204015:1:exon
so has part: feature:204482-204560:1:exon
so has part: feature:204643-204764:1:exon
so has part: feature:204864-204956:1:exon
so has part: feature:205123-205241:1:exon
so has part: feature:205325-205487:1:exon

XP_035202384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199169-199238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200996-201049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202172-202284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202632-202817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202985-203105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203300-203482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203837-204015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204482-204560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204643-204764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204864-204956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205123-205241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205325-205487:1:exon

RFX5
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: RFX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 207023..212093
location: region:207023-212093:1
so has part: feature:207023-212093:1:exon
subclass of: SO_0000010

118178147
type: Gene
SIO_000068: ncbigene

position:207023:1
position: 207023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212093:1
position: 212093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207023-212093:1:exon

RFX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RFX5
product: regulatory factor X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_035346438.1
SIO_010081: RFX5
subclass of: SO_0000673
so part of: RFX5
location: join(207023..207171,207720..207850,208467..208500,208926..209008,209169..209294,209476..209592,210047..210128,210431..210632,210834..210931,211092..212093)
location: region:207023-212093:1
so has part: feature:207023-207171:1:exon
so has part: feature:207720-207850:1:exon
so has part: feature:208467-208500:1:exon
so has part: feature:208926-209008:1:exon
so has part: feature:209169-209294:1:exon
so has part: feature:209476-209592:1:exon
so has part: feature:210047-210128:1:exon
so has part: feature:210431-210632:1:exon
so has part: feature:210834-210931:1:exon
so has part: feature:211092-212093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207023-207171:1:exon

position:207171:1
position: 207171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207720-207850:1:exon

position:207720:1
position: 207720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207850:1
position: 207850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208467-208500:1:exon

position:208467:1
position: 208467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208500:1
position: 208500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:208926-209008:1:exon

position:208926:1
position: 208926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209008:1
position: 209008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:209169-209294:1:exon

position:209169:1
position: 209169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209294:1
position: 209294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:209476-209592:1:exon

position:209476:1
position: 209476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209592:1
position: 209592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:210047-210128:1:exon

position:210047:1
position: 210047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210128:1
position: 210128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:210431-210632:1:exon

position:210431:1
position: 210431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210632:1
position: 210632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:210834-210931:1:exon

position:210834:1
position: 210834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210931:1
position: 210931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:211092-212093:1:exon

position:211092:1
position: 211092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RFX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RFX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFX5
translation: MADEEPSAQAARKGSSSPSGSRGSTTEPGTLLQKLRSTISKSVQNKVDSILQDVQKFSDNDKLYLYLQLPSGPSLGEKSSSLDLSSLSTAEYMHACNWIRNHLEEHTDTCLPKQDVYDAYKQYCDNLCCRPLSTANFGKIIREIFPNIKARRLGGRGQSKYCYSGIRRKTVVSLPPLPSLDLKVTETQSELTDLVQSYNSEVMEAACALTCDWAEKILKRSFNNIVEVAQFLIQQHIISSRSARADLVMAMVVSESTEKVHRDGRSPLAAKKNGLEASESSDRSQGQSKKESSPKASVPPRPEKKKLPEPPRPASSPQVNALVARLPLLLPRIQPGERLVAPGATAVRSSPPVLAPKLTAAPLAGTVKVALPLPVGTASPSLPLGLAPGANGAAGLLSQQAAVPVLNMLLPGVGVPGTDSPGNPRSAGPDGPSPQDSQRPKAAKRPPEPPGAAGATPQKRRRGRPRKRPEEGTAGSPAEQEQARGGAGDAEETEKLRRGAAAGPGGADGSPGGAAAAGGRLGAGAVPQVSGIQEGRSGAQRPAGARGQGLDEAEEEDEGAPPSTGEAGPHGGDPGADEGPPPPRGDGHRAGAAPSDAARCGPVLPGGSPEGAELRAPPNS
SIO_010081: RFX5
subclass of: SO_0000673
so part of: RFX5
location: join(207732..207850,208467..208500,208926..209008,209169..209294,209476..209592,210047..210128,210431..210632,210834..210931,211092..212093)
location: region:207732-212093:1
so has part: feature:207732-207850:1:exon
so has part: feature:208467-208500:1:exon
so has part: feature:208926-209008:1:exon
so has part: feature:209169-209294:1:exon
so has part: feature:209476-209592:1:exon
so has part: feature:210047-210128:1:exon
so has part: feature:210431-210632:1:exon
so has part: feature:210834-210931:1:exon
so has part: feature:211092-212093:1:exon

XP_035202329.1
type: Protein
SIO_000068: ncbiprotein

position:207732:1
position: 207732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207732-207850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208467-208500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208926-209008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209169-209294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209476-209592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:210047-210128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210431-210632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210834-210931:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211092-212093:1:exon

PI4KB
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PI4KB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213005..235999
location: region:213005-235999:1
so has part: feature:213005-235999:1:exon
subclass of: SO_0000010

118178184
type: Gene
SIO_000068: ncbigene

position:213005:1
position: 213005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235999:1
position: 235999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213005-235999:1:exon

PI4KB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PI4KB
product: phosphatidylinositol 4-kinase beta, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_035346485.1
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(213005..213113,218903..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235999)
location: region:213005-235999:1
so has part: feature:213005-213113:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213005-213113:1:exon

position:213113:1
position: 213113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218903-219848:1:exon

position:218903:1
position: 218903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219848:1
position: 219848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227429-227473:1:exon

position:227429:1
position: 227429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227473:1
position: 227473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:231513-231740:1:exon

position:231513:1
position: 231513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231740:1
position: 231740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:231916-232143:1:exon

position:231916:1
position: 231916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232143:1
position: 232143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:232336-232445:1:exon

position:232336:1
position: 232336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232445:1
position: 232445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:232984-233088:1:exon

position:232984:1
position: 232984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233088:1
position: 233088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:233737-233860:1:exon

position:233737:1
position: 233737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233860:1
position: 233860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:233950-234215:1:exon

position:233950:1
position: 233950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234215:1
position: 234215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:234391-234523:1:exon

position:234391:1
position: 234391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234523:1
position: 234523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:234859-234979:1:exon

position:234859:1
position: 234859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234979:1
position: 234979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:235561-235999:1:exon

position:235561:1
position: 235561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PI4KB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PI4KB
product: phosphatidylinositol 4-kinase beta, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_035346486.1
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(213074..213096,218900..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235999)
location: region:213074-235999:1
so has part: feature:213074-213096:1:exon
so has part: feature:218900-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235999:1:exon

position:213074:1
position: 213074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213074-213096:1:exon

position:213096:1
position: 213096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218900-219848:1:exon

position:218900:1
position: 218900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:235561-235999:1:exon

PI4KB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PI4KB
product: phosphatidylinositol 4-kinase beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035346480.1
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(215128..215489,215803..215952,218903..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235999)
location: region:215128-235999:1
so has part: feature:215128-215489:1:exon
so has part: feature:215803-215952:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235999:1:exon

position:215128:1
position: 215128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215128-215489:1:exon

position:215489:1
position: 215489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215803-215952:1:exon

position:215803:1
position: 215803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215952:1
position: 215952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218903-219848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:235561-235999:1:exon

PI4KB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PI4KB
product: phosphatidylinositol 4-kinase beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035346481.1
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(215129..215489,215806..215952,218903..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235999)
location: region:215129-235999:1
so has part: feature:215129-215489:1:exon
so has part: feature:215806-215952:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235999:1:exon

position:215129:1
position: 215129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215129-215489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215806-215952:1:exon

position:215806:1
position: 215806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218903-219848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:235561-235999:1:exon

PI4KB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PI4KB
product: phosphatidylinositol 4-kinase beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035346483.1
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(215160..215489,215803..215952,218903..219848,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235999)
location: region:215160-235999:1
so has part: feature:215160-215489:1:exon
so has part: feature:215803-215952:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235999:1:exon

position:215160:1
position: 215160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215160-215489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215803-215952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218903-219848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:235561-235999:1:exon

PI4KB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PI4KB
product: phosphatidylinositol 4-kinase beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_035346484.1
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(215164..215489,218903..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235999)
location: region:215164-235999:1
so has part: feature:215164-215489:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235999:1:exon

position:215164:1
position: 215164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215164-215489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218903-219848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:235561-235999:1:exon

PI4KB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PI4KB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase beta isoform X1
translation: MGFVAPSRPAVWKRGVTRGCRGSSYRPLPGCPFVSAKHGGASLAFRINVEEEFGTLGWPWEVSACSRCILKHSSEACRPTAAMGDSVAGPALSPAPQGNGGTSLSVITEGVGELAVIDPEVAKKACEEVLEKVKLMHGVSSDSLTKAADGSEAERAPRTAVDLPNGEVVEGCEIRCLDDLPSTASKIQEEDETTANTVKTARKRQKNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRNEEVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHKKRELPSLSPAPDMGLSPSKRTHQRSKSDATVTISLSSNLKRTASNPKVESEEEELSSSTESLDKSFCSPVRLAPEREFIKSLIAIGKRLATLPTKEQKTQRLISELSLLNHKLPARAWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECDNFDTANVPARIPENRIRSTRSAENLPECGITHEQRTSSFTTVPNYDNDDEAWSVDDIVELQVELPEIHTNSCDNISQFSVDSITSQESREPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPSWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQIKKQSLLSLLDYFLQEHGNYNTESFLTAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDADGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGPDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMNMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(215422..215489,215803..215952,218903..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235742)
location: region:215422-235742:1
so has part: feature:215422-215489:1:exon
so has part: feature:215803-215952:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235742:1:exon

XP_035202371.1
type: Protein
SIO_000068: ncbiprotein

position:215422:1
position: 215422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235742:1
position: 235742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215422-215489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215803-215952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218903-219848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:235561-235742:1:exon

PI4KB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PI4KB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase beta isoform X3
translation: MGFVAPSRPAVWKRGVTRGCRGSSYRPLPGCPFVSAKHGGASLAFRINVEEEFGTLGWPWEVSACSRCILKHSSEACRPTAAMGDSVAGPALSPAPQGNGGTSLSVITEGVGELAVIDPEVAKKACEEVLEKVKLMHGVSSDSLTKAADGSEAERAPRTAVDLPNGEVVEGCEIRCLDDLPSTASKIQEEDETTANTVKTARKRQKNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRNEEVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHKKRELPSLSPAPDMGLSPSKRTHQRSKSDATVTISLSSNLKRTASNPKVESEEEPVRLAPEREFIKSLIAIGKRLATLPTKEQKTQRLISELSLLNHKLPARAWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECDNFDTANVPARIPENRIRSTRSAENLPECGITHEQRTSSFTTVPNYDNDDEAWSVDDIVELQVELPEIHTNSCDNISQFSVDSITSQESREPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPSWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQIKKQSLLSLLDYFLQEHGNYNTESFLTAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDADGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGPDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMNMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(215422..215489,215803..215952,218903..219848,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235742)
location: region:215422-235742:1
so has part: feature:215422-215489:1:exon
so has part: feature:215803-215952:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235742:1:exon

XP_035202374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215422-215489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215803-215952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218903-219848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:235561-235742:1:exon

PI4KB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PI4KB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase beta isoform X2
translation: MGFVAPSRPAVWKRGVTRGCRGSYRPLPGCPFVSAKHGGASLAFRINVEEEFGTLGWPWEVSACSRCILKHSSEACRPTAAMGDSVAGPALSPAPQGNGGTSLSVITEGVGELAVIDPEVAKKACEEVLEKVKLMHGVSSDSLTKAADGSEAERAPRTAVDLPNGEVVEGCEIRCLDDLPSTASKIQEEDETTANTVKTARKRQKNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRNEEVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHKKRELPSLSPAPDMGLSPSKRTHQRSKSDATVTISLSSNLKRTASNPKVESEEEELSSSTESLDKSFCSPVRLAPEREFIKSLIAIGKRLATLPTKEQKTQRLISELSLLNHKLPARAWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECDNFDTANVPARIPENRIRSTRSAENLPECGITHEQRTSSFTTVPNYDNDDEAWSVDDIVELQVELPEIHTNSCDNISQFSVDSITSQESREPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPSWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQIKKQSLLSLLDYFLQEHGNYNTESFLTAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDADGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGPDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMNMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(215422..215489,215806..215952,218903..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235742)
location: region:215422-235742:1
so has part: feature:215422-215489:1:exon
so has part: feature:215806-215952:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235742:1:exon

XP_035202372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215422-215489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215806-215952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218903-219848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:235561-235742:1:exon

PI4KB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PI4KB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase beta isoform X4
translation: MGFVAPSRPAVWKRGVTRGCRGSSEACRPTAAMGDSVAGPALSPAPQGNGGTSLSVITEGVGELAVIDPEVAKKACEEVLEKVKLMHGVSSDSLTKAADGSEAERAPRTAVDLPNGEVVEGCEIRCLDDLPSTASKIQEEDETTANTVKTARKRQKNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRNEEVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHKKRELPSLSPAPDMGLSPSKRTHQRSKSDATVTISLSSNLKRTASNPKVESEEEELSSSTESLDKSFCSPVRLAPEREFIKSLIAIGKRLATLPTKEQKTQRLISELSLLNHKLPARAWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECDNFDTANVPARIPENRIRSTRSAENLPECGITHEQRTSSFTTVPNYDNDDEAWSVDDIVELQVELPEIHTNSCDNISQFSVDSITSQESREPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPSWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQIKKQSLLSLLDYFLQEHGNYNTESFLTAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDADGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGPDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMNMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(215422..215489,218903..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235742)
location: region:215422-235742:1
so has part: feature:215422-215489:1:exon
so has part: feature:218903-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235742:1:exon

XP_035202375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215422-215489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218903-219848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:235561-235742:1:exon

PI4KB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PI4KB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase beta isoform X5
translation: MGDSVAGPALSPAPQGNGGTSLSVITEGVGELAVIDPEVAKKACEEVLEKVKLMHGVSSDSLTKAADGSEAERAPRTAVDLPNGEVVEGCEIRCLDDLPSTASKIQEEDETTANTVKTARKRQKNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRNEEVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHKKRELPSLSPAPDMGLSPSKRTHQRSKSDATVTISLSSNLKRTASNPKVESEEEELSSSTESLDKSFCSPVRLAPEREFIKSLIAIGKRLATLPTKEQKTQRLISELSLLNHKLPARAWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECDNFDTANVPARIPENRIRSTRSAENLPECGITHEQRTSSFTTVPNYDNDDEAWSVDDIVELQVELPEIHTNSCDNISQFSVDSITSQESREPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPSWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQIKKQSLLSLLDYFLQEHGNYNTESFLTAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDADGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGPDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMNMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(218931..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235742)
location: region:218931-235742:1
so has part: feature:218931-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235742:1:exon

XP_035202376.1
type: Protein
SIO_000068: ncbiprotein

position:218931:1
position: 218931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218931-219848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:235561-235742:1:exon

PI4KB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PI4KB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase beta isoform X5
translation: MGDSVAGPALSPAPQGNGGTSLSVITEGVGELAVIDPEVAKKACEEVLEKVKLMHGVSSDSLTKAADGSEAERAPRTAVDLPNGEVVEGCEIRCLDDLPSTASKIQEEDETTANTVKTARKRQKNNSAKQSWLLRLFESKLFDISMAISYLYNSKEPGVQAYIGNRLFCFRNEEVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSLQCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHKKRELPSLSPAPDMGLSPSKRTHQRSKSDATVTISLSSNLKRTASNPKVESEEEELSSSTESLDKSFCSPVRLAPEREFIKSLIAIGKRLATLPTKEQKTQRLISELSLLNHKLPARAWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECDNFDTANVPARIPENRIRSTRSAENLPECGITHEQRTSSFTTVPNYDNDDEAWSVDDIVELQVELPEIHTNSCDNISQFSVDSITSQESREPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPSWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQIKKQSLLSLLDYFLQEHGNYNTESFLTAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDADGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGPDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMNMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(218931..219848,227429..227473,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235742)
location: region:218931-235742:1
so has part: feature:218931-219848:1:exon
so has part: feature:227429-227473:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235742:1:exon

XP_035202377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218931-219848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227429-227473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:235561-235742:1:exon

PI4KB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PI4KB
product: phosphatidylinositol 4-kinase beta, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_035346487.1
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(227520..227613,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235999)
location: region:227520-235999:1
so has part: feature:227520-227613:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235999:1:exon

position:227520:1
position: 227520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227520-227613:1:exon

position:227613:1
position: 227613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235561-235999:1:exon

PI4KB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PI4KB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase beta isoform X6
translation: MKILNPGAWPCPTSSADTKPSRNPVRLAPEREFIKSLIAIGKRLATLPTKEQKTQRLISELSLLNHKLPARAWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECDNFDTANVPARIPENRIRSTRSAENLPECGITHEQRTSSFTTVPNYDNDDEAWSVDDIVELQVELPEIHTNSCDNISQFSVDSITSQESREPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPSWRLLSVIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQIKKQSLLSLLDYFLQEHGNYNTESFLTAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDADGHIIHIDFGFILSSSPRNLGFETSAFKLTTEFVDVMGGPDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIRNLKERFHMNMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM
SIO_010081: PI4KB
subclass of: SO_0000673
so part of: PI4KB
location: join(227545..227613,231513..231740,231916..232143,232336..232445,232984..233088,233737..233860,233950..234215,234391..234523,234859..234979,235561..235742)
location: region:227545-235742:1
so has part: feature:227545-227613:1:exon
so has part: feature:231513-231740:1:exon
so has part: feature:231916-232143:1:exon
so has part: feature:232336-232445:1:exon
so has part: feature:232984-233088:1:exon
so has part: feature:233737-233860:1:exon
so has part: feature:233950-234215:1:exon
so has part: feature:234391-234523:1:exon
so has part: feature:234859-234979:1:exon
so has part: feature:235561-235742:1:exon

XP_035202378.1
type: Protein
SIO_000068: ncbiprotein

position:227545:1
position: 227545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227545-227613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231513-231740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231916-232143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232336-232445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232984-233088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233737-233860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233950-234215:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234391-234523:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234859-234979:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235561-235742:1:exon

ZNF687
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ZNF687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(237498..263138)
location: region:237498-263138:-1
so has part: feature:237498-263138:-1:exon
subclass of: SO_0000010

118178183
type: Gene
SIO_000068: ncbigene

position:237498:-1
position: 237498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263138:-1
position: 263138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237498-263138:-1:exon

ZNF687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ZNF687
product: zinc finger protein 687, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035346476.1
SIO_010081: ZNF687
subclass of: SO_0000673
so part of: ZNF687
location: complement(join(237498..240388,241032..241173,241553..241665,242017..242313,242764..242926,243179..243355,243911..244089,246376..248645,263000..263138))
location: region:237498-263138:-1
so has part: feature:263000-263138:-1:exon
so has part: feature:246376-248645:-1:exon
so has part: feature:243911-244089:-1:exon
so has part: feature:243179-243355:-1:exon
so has part: feature:242764-242926:-1:exon
so has part: feature:242017-242313:-1:exon
so has part: feature:241553-241665:-1:exon
so has part: feature:241032-241173:-1:exon
so has part: feature:237498-240388:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263000-263138:-1:exon

position:263000:-1
position: 263000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246376-248645:-1:exon

position:246376:-1
position: 246376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248645:-1
position: 248645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243911-244089:-1:exon

position:243911:-1
position: 243911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244089:-1
position: 244089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243179-243355:-1:exon

position:243179:-1
position: 243179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243355:-1
position: 243355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:242764-242926:-1:exon

position:242764:-1
position: 242764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242926:-1
position: 242926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:242017-242313:-1:exon

position:242017:-1
position: 242017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242313:-1
position: 242313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:241553-241665:-1:exon

position:241553:-1
position: 241553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241665:-1
position: 241665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:241032-241173:-1:exon

position:241032:-1
position: 241032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241173:-1
position: 241173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:237498-240388:-1:exon

position:240388:-1
position: 240388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ZNF687
product: zinc finger protein 687, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_035346477.1
SIO_010081: ZNF687
subclass of: SO_0000673
so part of: ZNF687
location: complement(join(237498..240388,241032..241173,241553..241665,242017..242313,242764..242926,243179..243355,243911..244089,246376..248642,259169..259453))
location: region:237498-259453:-1
so has part: feature:259169-259453:-1:exon
so has part: feature:246376-248642:-1:exon
so has part: feature:243911-244089:-1:exon
so has part: feature:243179-243355:-1:exon
so has part: feature:242764-242926:-1:exon
so has part: feature:242017-242313:-1:exon
so has part: feature:241553-241665:-1:exon
so has part: feature:241032-241173:-1:exon
so has part: feature:237498-240388:-1:exon

position:259453:-1
position: 259453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259169-259453:-1:exon

position:259169:-1
position: 259169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246376-248642:-1:exon

position:248642:-1
position: 248642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243911-244089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243179-243355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242764-242926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242017-242313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241553-241665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241032-241173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237498-240388:-1:exon

ZNF687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ZNF687
product: zinc finger protein 687, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035346478.1
SIO_010081: ZNF687
subclass of: SO_0000673
so part of: ZNF687
location: complement(join(237498..240388,241032..241173,241553..241665,242017..242313,242764..242926,243179..243355,243911..244089,246376..248645,254244..254262))
location: region:237498-254262:-1
so has part: feature:254244-254262:-1:exon
so has part: feature:246376-248645:-1:exon
so has part: feature:243911-244089:-1:exon
so has part: feature:243179-243355:-1:exon
so has part: feature:242764-242926:-1:exon
so has part: feature:242017-242313:-1:exon
so has part: feature:241553-241665:-1:exon
so has part: feature:241032-241173:-1:exon
so has part: feature:237498-240388:-1:exon

position:254262:-1
position: 254262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254244-254262:-1:exon

position:254244:-1
position: 254244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246376-248645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243911-244089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243179-243355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242764-242926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242017-242313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241553-241665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241032-241173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237498-240388:-1:exon

ZNF687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ZNF687
product: zinc finger protein 687, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_035346479.1
SIO_010081: ZNF687
subclass of: SO_0000673
so part of: ZNF687
location: complement(join(237498..240388,241032..241173,241553..241665,242017..242313,242764..242926,243179..243355,243911..244089,246376..248215,248303..248644))
location: region:237498-248644:-1
so has part: feature:248303-248644:-1:exon
so has part: feature:246376-248215:-1:exon
so has part: feature:243911-244089:-1:exon
so has part: feature:243179-243355:-1:exon
so has part: feature:242764-242926:-1:exon
so has part: feature:242017-242313:-1:exon
so has part: feature:241553-241665:-1:exon
so has part: feature:241032-241173:-1:exon
so has part: feature:237498-240388:-1:exon

position:248644:-1
position: 248644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248303-248644:-1:exon

position:248303:-1
position: 248303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246376-248215:-1:exon

position:248215:-1
position: 248215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243911-244089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243179-243355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242764-242926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242017-242313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241553-241665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241032-241173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237498-240388:-1:exon

ZNF687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ZNF687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 687 isoform X2
translation: MGDMKTPDFDDLLAAFDIPDIDTNEAIHSSHEEADAHIKQVPGEPGPPDHVLPHTDITAVSVIVKNTVCPEQLDALDGRSKDGHVIGPRLLQNGFGAAEMPRSPTSSPDPNEDNAANLIDRPRECKPKEKSLAVPSLSPSPTPSLDCKEPMGESTENLPPAFPQPFETSQAGGANGSPPSVPCIKKEESDSEEVGREASPKGLAAALGDSPLEHLKSVTVRYSTGDSPIASWPGSDPNLDSSTSNLPEVKRSPTSPREPFFKPSSPMVQSPRLPPSPKQLDDIALKEEQEALEKAMGSPQSMSSAEEEEEEDDNNNDSPSSNSSRPLKVRIKTIKTSCGSITRTVTRVSSDSEPGSTKGTAEQSSQEPSLEGISFSGSAEKEDGIVLEVPKEKMDLSSPLKTIEGPKIVSVQLGNGTKIKGTVLPVSTIQNASSAMLIAASVAQQKSVVLPSKTGKAVAKNIINLVPQTLPKADTRTNVSTVTQTTTITTTANQKVNGTTVVMVQPQKPSPTIAGTVISRSQSSLVEAFNKILNSKNLLPTYKPNLNPPADASLTLPPFGYRCLECGDSFALEKSLARHYDRRSMRIEVTCNHCTKRLVFFNKCSLLLHAREHKDKGLVMQCSHLVMRPIALDQMIGQPDITPLVSVTSFPAGKVAGVAQDALAAANGAPELPILPLSSGLEQTNYSCFRCLECKEQCKDKAGLAAHFQQAVTTGTTSSTVCTTCPMIMSNRCSFNAHQRMHKNRPPHVCPECGGNFLLANFETHLKEACLHFSRRVGYRCPSCAVVFGGVNSIKSHIQTSHCEVFHKCPICPMAFKSAPSAHAHVYTQHPGFSNQQSKMIYKCAMCDTVFTHKPLLSSHFDQHLLNQRVSVFKCPDCPLLFAQKRTMLEHLKNTHQPQKPKDDLAKKAAVLLTPKQEPVETPVSKISEESSSSTEEDEPPSSPELRKTKRSRFQRKTVNKSKGSGWTCGVCHSWFPERDEYVSHMKKDHGKSVKKFPCHLCERSFCSAPSLRRHVRVNHEGIKRVYPCRYCTEGKRTFSSRLILEKHIQVRHGIKVTDQTKSQEVVIARIGTGTAQVSGRKRKLSSDEGDSCSEEPDSTTPPSKNPKGDRKAPFRCRKCGYLASSSADFQEHIPQHRTDESSHQCRECGLCFTSQVSLNRHRFITHKKKKGAGEMEEPGPRSPLEGGAQHMADGKLSCKVCGRCFDSQLNLKTHFRTHGMAFIRARQNASPEN
SIO_010081: ZNF687
subclass of: SO_0000673
so part of: ZNF687
location: complement(join(239915..240388,241032..241173,241553..241665,242017..242313,242764..242926,243179..243355,243911..244089,246376..248215,248303..248622))
location: region:239915-248622:-1
so has part: feature:248303-248622:-1:exon
so has part: feature:246376-248215:-1:exon
so has part: feature:243911-244089:-1:exon
so has part: feature:243179-243355:-1:exon
so has part: feature:242764-242926:-1:exon
so has part: feature:242017-242313:-1:exon
so has part: feature:241553-241665:-1:exon
so has part: feature:241032-241173:-1:exon
so has part: feature:239915-240388:-1:exon

XP_035202370.1
type: Protein
SIO_000068: ncbiprotein

position:239915:-1
position: 239915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248622:-1
position: 248622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248303-248622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246376-248215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243911-244089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243179-243355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242764-242926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242017-242313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241553-241665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241032-241173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:239915-240388:-1:exon

ZNF687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ZNF687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 687 isoform X1
translation: MGDMKTPDFDDLLAAFDIPDIDTNEAIHSSHEEADAHIKQVPGEPGPPDHVLPHTDITAVSVIVKNTVCPEQLDALDGRSKDGHVIGPRLLQNGFGAAEMPRSPTSRSVEAVASSNGECWGKEKGPKALDIFSHFSPDPNEDNAANLIDRPRECKPKEKSLAVPSLSPSPTPSLDCKEPMGESTENLPPAFPQPFETSQAGGANGSPPSVPCIKKEESDSEEVGREASPKGLAAALGDSPLEHLKSVTVRYSTGDSPIASWPGSDPNLDSSTSNLPEVKRSPTSPREPFFKPSSPMVQSPRLPPSPKQLDDIALKEEQEALEKAMGSPQSMSSAEEEEEEDDNNNDSPSSNSSRPLKVRIKTIKTSCGSITRTVTRVSSDSEPGSTKGTAEQSSQEPSLEGISFSGSAEKEDGIVLEVPKEKMDLSSPLKTIEGPKIVSVQLGNGTKIKGTVLPVSTIQNASSAMLIAASVAQQKSVVLPSKTGKAVAKNIINLVPQTLPKADTRTNVSTVTQTTTITTTANQKVNGTTVVMVQPQKPSPTIAGTVISRSQSSLVEAFNKILNSKNLLPTYKPNLNPPADASLTLPPFGYRCLECGDSFALEKSLARHYDRRSMRIEVTCNHCTKRLVFFNKCSLLLHAREHKDKGLVMQCSHLVMRPIALDQMIGQPDITPLVSVTSFPAGKVAGVAQDALAAANGAPELPILPLSSGLEQTNYSCFRCLECKEQCKDKAGLAAHFQQAVTTGTTSSTVCTTCPMIMSNRCSFNAHQRMHKNRPPHVCPECGGNFLLANFETHLKEACLHFSRRVGYRCPSCAVVFGGVNSIKSHIQTSHCEVFHKCPICPMAFKSAPSAHAHVYTQHPGFSNQQSKMIYKCAMCDTVFTHKPLLSSHFDQHLLNQRVSVFKCPDCPLLFAQKRTMLEHLKNTHQPQKPKDDLAKKAAVLLTPKQEPVETPVSKISEESSSSTEEDEPPSSPELRKTKRSRFQRKTVNKSKGSGWTCGVCHSWFPERDEYVSHMKKDHGKSVKKFPCHLCERSFCSAPSLRRHVRVNHEGIKRVYPCRYCTEGKRTFSSRLILEKHIQVRHGIKVTDQTKSQEVVIARIGTGTAQVSGRKRKLSSDEGDSCSEEPDSTTPPSKNPKGDRKAPFRCRKCGYLASSSADFQEHIPQHRTDESSHQCRECGLCFTSQVSLNRHRFITHKKKKGAGEMEEPGPRSPLEGGAQHMADGKLSCKVCGRCFDSQLNLKTHFRTHGMAFIRARQNASPEN
SIO_010081: ZNF687
subclass of: SO_0000673
so part of: ZNF687
location: complement(join(239915..240388,241032..241173,241553..241665,242017..242313,242764..242926,243179..243355,243911..244089,246376..248622))
location: region:239915-248622:-1
so has part: feature:246376-248622:-1:exon
so has part: feature:243911-244089:-1:exon
so has part: feature:243179-243355:-1:exon
so has part: feature:242764-242926:-1:exon
so has part: feature:242017-242313:-1:exon
so has part: feature:241553-241665:-1:exon
so has part: feature:241032-241173:-1:exon
so has part: feature:239915-240388:-1:exon

XP_035202367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246376-248622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243911-244089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243179-243355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242764-242926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242017-242313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241553-241665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241032-241173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239915-240388:-1:exon

ZNF687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ZNF687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 687 isoform X1
translation: MGDMKTPDFDDLLAAFDIPDIDTNEAIHSSHEEADAHIKQVPGEPGPPDHVLPHTDITAVSVIVKNTVCPEQLDALDGRSKDGHVIGPRLLQNGFGAAEMPRSPTSRSVEAVASSNGECWGKEKGPKALDIFSHFSPDPNEDNAANLIDRPRECKPKEKSLAVPSLSPSPTPSLDCKEPMGESTENLPPAFPQPFETSQAGGANGSPPSVPCIKKEESDSEEVGREASPKGLAAALGDSPLEHLKSVTVRYSTGDSPIASWPGSDPNLDSSTSNLPEVKRSPTSPREPFFKPSSPMVQSPRLPPSPKQLDDIALKEEQEALEKAMGSPQSMSSAEEEEEEDDNNNDSPSSNSSRPLKVRIKTIKTSCGSITRTVTRVSSDSEPGSTKGTAEQSSQEPSLEGISFSGSAEKEDGIVLEVPKEKMDLSSPLKTIEGPKIVSVQLGNGTKIKGTVLPVSTIQNASSAMLIAASVAQQKSVVLPSKTGKAVAKNIINLVPQTLPKADTRTNVSTVTQTTTITTTANQKVNGTTVVMVQPQKPSPTIAGTVISRSQSSLVEAFNKILNSKNLLPTYKPNLNPPADASLTLPPFGYRCLECGDSFALEKSLARHYDRRSMRIEVTCNHCTKRLVFFNKCSLLLHAREHKDKGLVMQCSHLVMRPIALDQMIGQPDITPLVSVTSFPAGKVAGVAQDALAAANGAPELPILPLSSGLEQTNYSCFRCLECKEQCKDKAGLAAHFQQAVTTGTTSSTVCTTCPMIMSNRCSFNAHQRMHKNRPPHVCPECGGNFLLANFETHLKEACLHFSRRVGYRCPSCAVVFGGVNSIKSHIQTSHCEVFHKCPICPMAFKSAPSAHAHVYTQHPGFSNQQSKMIYKCAMCDTVFTHKPLLSSHFDQHLLNQRVSVFKCPDCPLLFAQKRTMLEHLKNTHQPQKPKDDLAKKAAVLLTPKQEPVETPVSKISEESSSSTEEDEPPSSPELRKTKRSRFQRKTVNKSKGSGWTCGVCHSWFPERDEYVSHMKKDHGKSVKKFPCHLCERSFCSAPSLRRHVRVNHEGIKRVYPCRYCTEGKRTFSSRLILEKHIQVRHGIKVTDQTKSQEVVIARIGTGTAQVSGRKRKLSSDEGDSCSEEPDSTTPPSKNPKGDRKAPFRCRKCGYLASSSADFQEHIPQHRTDESSHQCRECGLCFTSQVSLNRHRFITHKKKKGAGEMEEPGPRSPLEGGAQHMADGKLSCKVCGRCFDSQLNLKTHFRTHGMAFIRARQNASPEN
SIO_010081: ZNF687
subclass of: SO_0000673
so part of: ZNF687
location: complement(join(239915..240388,241032..241173,241553..241665,242017..242313,242764..242926,243179..243355,243911..244089,246376..248622))
location: region:239915-248622:-1
so has part: feature:246376-248622:-1:exon
so has part: feature:243911-244089:-1:exon
so has part: feature:243179-243355:-1:exon
so has part: feature:242764-242926:-1:exon
so has part: feature:242017-242313:-1:exon
so has part: feature:241553-241665:-1:exon
so has part: feature:241032-241173:-1:exon
so has part: feature:239915-240388:-1:exon

XP_035202368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246376-248622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243911-244089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243179-243355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242764-242926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242017-242313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241553-241665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241032-241173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239915-240388:-1:exon

ZNF687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ZNF687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 687 isoform X1
translation: MGDMKTPDFDDLLAAFDIPDIDTNEAIHSSHEEADAHIKQVPGEPGPPDHVLPHTDITAVSVIVKNTVCPEQLDALDGRSKDGHVIGPRLLQNGFGAAEMPRSPTSRSVEAVASSNGECWGKEKGPKALDIFSHFSPDPNEDNAANLIDRPRECKPKEKSLAVPSLSPSPTPSLDCKEPMGESTENLPPAFPQPFETSQAGGANGSPPSVPCIKKEESDSEEVGREASPKGLAAALGDSPLEHLKSVTVRYSTGDSPIASWPGSDPNLDSSTSNLPEVKRSPTSPREPFFKPSSPMVQSPRLPPSPKQLDDIALKEEQEALEKAMGSPQSMSSAEEEEEEDDNNNDSPSSNSSRPLKVRIKTIKTSCGSITRTVTRVSSDSEPGSTKGTAEQSSQEPSLEGISFSGSAEKEDGIVLEVPKEKMDLSSPLKTIEGPKIVSVQLGNGTKIKGTVLPVSTIQNASSAMLIAASVAQQKSVVLPSKTGKAVAKNIINLVPQTLPKADTRTNVSTVTQTTTITTTANQKVNGTTVVMVQPQKPSPTIAGTVISRSQSSLVEAFNKILNSKNLLPTYKPNLNPPADASLTLPPFGYRCLECGDSFALEKSLARHYDRRSMRIEVTCNHCTKRLVFFNKCSLLLHAREHKDKGLVMQCSHLVMRPIALDQMIGQPDITPLVSVTSFPAGKVAGVAQDALAAANGAPELPILPLSSGLEQTNYSCFRCLECKEQCKDKAGLAAHFQQAVTTGTTSSTVCTTCPMIMSNRCSFNAHQRMHKNRPPHVCPECGGNFLLANFETHLKEACLHFSRRVGYRCPSCAVVFGGVNSIKSHIQTSHCEVFHKCPICPMAFKSAPSAHAHVYTQHPGFSNQQSKMIYKCAMCDTVFTHKPLLSSHFDQHLLNQRVSVFKCPDCPLLFAQKRTMLEHLKNTHQPQKPKDDLAKKAAVLLTPKQEPVETPVSKISEESSSSTEEDEPPSSPELRKTKRSRFQRKTVNKSKGSGWTCGVCHSWFPERDEYVSHMKKDHGKSVKKFPCHLCERSFCSAPSLRRHVRVNHEGIKRVYPCRYCTEGKRTFSSRLILEKHIQVRHGIKVTDQTKSQEVVIARIGTGTAQVSGRKRKLSSDEGDSCSEEPDSTTPPSKNPKGDRKAPFRCRKCGYLASSSADFQEHIPQHRTDESSHQCRECGLCFTSQVSLNRHRFITHKKKKGAGEMEEPGPRSPLEGGAQHMADGKLSCKVCGRCFDSQLNLKTHFRTHGMAFIRARQNASPEN
SIO_010081: ZNF687
subclass of: SO_0000673
so part of: ZNF687
location: complement(join(239915..240388,241032..241173,241553..241665,242017..242313,242764..242926,243179..243355,243911..244089,246376..248622))
location: region:239915-248622:-1
so has part: feature:246376-248622:-1:exon
so has part: feature:243911-244089:-1:exon
so has part: feature:243179-243355:-1:exon
so has part: feature:242764-242926:-1:exon
so has part: feature:242017-242313:-1:exon
so has part: feature:241553-241665:-1:exon
so has part: feature:241032-241173:-1:exon
so has part: feature:239915-240388:-1:exon

XP_035202369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246376-248622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243911-244089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243179-243355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242764-242926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242017-242313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241553-241665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241032-241173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239915-240388:-1:exon

PSMD4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PSMD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(263756..269437)
location: region:263756-269437:-1
so has part: feature:263756-269437:-1:exon
subclass of: SO_0000010

118178188
type: Gene
SIO_000068: ncbigene

position:263756:-1
position: 263756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269437:-1
position: 269437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263756-269437:-1:exon

PSMD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSMD4
product: proteasome 26S subunit, non-ATPase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346495.1
SIO_010081: PSMD4
subclass of: SO_0000673
so part of: PSMD4
location: complement(join(263756..264012,264044..264208,264592..264700,264805..265020,265446..265514,265800..265886,266962..267076,267868..268008,269293..269437))
location: region:263756-269437:-1
so has part: feature:269293-269437:-1:exon
so has part: feature:267868-268008:-1:exon
so has part: feature:266962-267076:-1:exon
so has part: feature:265800-265886:-1:exon
so has part: feature:265446-265514:-1:exon
so has part: feature:264805-265020:-1:exon
so has part: feature:264592-264700:-1:exon
so has part: feature:264044-264208:-1:exon
so has part: feature:263756-264012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269293-269437:-1:exon

position:269293:-1
position: 269293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:267868-268008:-1:exon

position:267868:-1
position: 267868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268008:-1
position: 268008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266962-267076:-1:exon

position:266962:-1
position: 266962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267076:-1
position: 267076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:265800-265886:-1:exon

position:265800:-1
position: 265800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265886:-1
position: 265886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265446-265514:-1:exon

position:265446:-1
position: 265446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265514:-1
position: 265514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:264805-265020:-1:exon

position:264805:-1
position: 264805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265020:-1
position: 265020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264592-264700:-1:exon

position:264592:-1
position: 264592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264700:-1
position: 264700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:264044-264208:-1:exon

position:264044:-1
position: 264044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264208:-1
position: 264208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:263756-264012:-1:exon

position:264012:-1
position: 264012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSMD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 4
translation: MGGLAAQRARASVREGGKMVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANNCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGEEEANTDKLTAFINTLNGKDGTGSHLVTVPPGPSLADALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAAASAAEAGIAATGGDDSDDALLKMTITQQEFGRAGLPDLSSMTEEEQIAYAMQMSLQGAGEGRGSGGGGGAPSSLPTRRPQEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQAAKDGKEKKEEERK
SIO_010081: PSMD4
subclass of: SO_0000673
so part of: PSMD4
location: complement(join(263813..264012,264044..264208,264592..264700,264805..265020,265446..265514,265800..265886,266962..267076,267868..268008,269293..269372))
location: region:263813-269372:-1
so has part: feature:269293-269372:-1:exon
so has part: feature:267868-268008:-1:exon
so has part: feature:266962-267076:-1:exon
so has part: feature:265800-265886:-1:exon
so has part: feature:265446-265514:-1:exon
so has part: feature:264805-265020:-1:exon
so has part: feature:264592-264700:-1:exon
so has part: feature:264044-264208:-1:exon
so has part: feature:263813-264012:-1:exon

XP_035202386.1
type: Protein
SIO_000068: ncbiprotein

position:263813:-1
position: 263813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269372:-1
position: 269372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269293-269372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267868-268008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266962-267076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265800-265886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265446-265514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264805-265020:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264592-264700:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264044-264208:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263813-264012:-1:exon

PIP5K1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(272071..296513)
location: region:272071-296513:-1
so has part: feature:272071-296513:-1:exon
subclass of: SO_0000010

118178130
type: Gene
SIO_000068: ncbigene

position:272071:-1
position: 272071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296513:-1
position: 296513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272071-296513:-1:exon

PIP5K1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PIP5K1A
product: phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_035346404.1
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(272071..273328,273862..273946,277893..278001,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242,287995..288029,296471..296513))
location: region:272071-296513:-1
so has part: feature:296471-296513:-1:exon
so has part: feature:287995-288029:-1:exon
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278001:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:272071-273328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296471-296513:-1:exon

position:296471:-1
position: 296471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287995-288029:-1:exon

position:287995:-1
position: 287995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288029:-1
position: 288029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287153-287242:-1:exon

position:287153:-1
position: 287153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287242:-1
position: 287242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284205-284335:-1:exon

position:284205:-1
position: 284205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284335:-1
position: 284335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283684-283801:-1:exon

position:283684:-1
position: 283684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283801:-1
position: 283801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:283313-283465:-1:exon

position:283313:-1
position: 283313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283465:-1
position: 283465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:281858-282157:-1:exon

position:281858:-1
position: 281858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282157:-1
position: 282157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:281088-281293:-1:exon

position:281088:-1
position: 281088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281293:-1
position: 281293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:280352-280435:-1:exon

position:280352:-1
position: 280352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280435:-1
position: 280435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:279349-279397:-1:exon

position:279349:-1
position: 279349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279397:-1
position: 279397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:278889-278973:-1:exon

position:278889:-1
position: 278889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278973:-1
position: 278973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:278433-278570:-1:exon

position:278433:-1
position: 278433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278570:-1
position: 278570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278001:-1:exon

position:277893:-1
position: 277893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278001:-1
position: 278001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:273862-273946:-1:exon

position:273862:-1
position: 273862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273946:-1
position: 273946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:272071-273328:-1:exon

position:273328:-1
position: 273328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIP5K1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PIP5K1A
product: phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_035346405.1
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(272071..273328,273862..273969,277893..278001,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242,287995..288029,296471..296513))
location: region:272071-296513:-1
so has part: feature:296471-296513:-1:exon
so has part: feature:287995-288029:-1:exon
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278001:-1:exon
so has part: feature:273862-273969:-1:exon
so has part: feature:272071-273328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296471-296513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287995-288029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273862-273969:-1:exon

position:273969:-1
position: 273969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:272071-273328:-1:exon

PIP5K1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PIP5K1A
product: phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_035346401.1
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(272071..273328,273862..273946,276845..276925,277893..278001,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242,287995..288029,296471..296513))
location: region:272071-296513:-1
so has part: feature:296471-296513:-1:exon
so has part: feature:287995-288029:-1:exon
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278001:-1:exon
so has part: feature:276845-276925:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:272071-273328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296471-296513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287995-288029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276845-276925:-1:exon

position:276845:-1
position: 276845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276925:-1
position: 276925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272071-273328:-1:exon

PIP5K1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PIP5K1A
product: phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035346402.1
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(272071..273328,273862..273946,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242,287995..288029,296471..296513))
location: region:272071-296513:-1
so has part: feature:296471-296513:-1:exon
so has part: feature:287995-288029:-1:exon
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:272071-273328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296471-296513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287995-288029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278022:-1:exon

position:278022:-1
position: 278022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272071-273328:-1:exon

PIP5K1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PIP5K1A
product: phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035346403.1
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(272071..273328,273862..273969,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242,287995..288029,296471..296513))
location: region:272071-296513:-1
so has part: feature:296471-296513:-1:exon
so has part: feature:287995-288029:-1:exon
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:273862-273969:-1:exon
so has part: feature:272071-273328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296471-296513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287995-288029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273862-273969:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272071-273328:-1:exon

PIP5K1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PIP5K1A
product: phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_035346398.1
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(272071..273328,273862..273946,276845..276925,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242,287995..288029,296471..296513))
location: region:272071-296513:-1
so has part: feature:296471-296513:-1:exon
so has part: feature:287995-288029:-1:exon
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
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so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:276845-276925:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:272071-273328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296471-296513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287995-288029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276845-276925:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272071-273328:-1:exon

PIP5K1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PIP5K1A
product: phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_035346400.1
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(272071..273328,273862..273969,276845..276925,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242,287995..288029,296471..296513))
location: region:272071-296513:-1
so has part: feature:296471-296513:-1:exon
so has part: feature:287995-288029:-1:exon
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:276845-276925:-1:exon
so has part: feature:273862-273969:-1:exon
so has part: feature:272071-273328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296471-296513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287995-288029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276845-276925:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:273862-273969:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272071-273328:-1:exon

PIP5K1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PIP5K1A
product: phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_035346399.1
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(272071..273328,273862..273946,276845..276925,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242,287995..288029,290895..291098))
location: region:272071-291098:-1
so has part: feature:290895-291098:-1:exon
so has part: feature:287995-288029:-1:exon
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:276845-276925:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:272071-273328:-1:exon

position:291098:-1
position: 291098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290895-291098:-1:exon

position:290895:-1
position: 290895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287995-288029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276845-276925:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272071-273328:-1:exon

PIP5K1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X6
translation: MPGSSGQPGSQTIKKGHRGVDSTGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHLKYDLKGSTYKRRASQKEREKVFPTYKDLDFMQDIPDGLFLDSDMYNALCKTLQRDCLVLQSFKIMDYSLLVAIHNIDLAQREHALADGTSQTDTRRPAAQKALYSTAMESIQGEARRGGTIETDDQMGGIPARNAKGERLLLYIGIIDVLQSYRFVKKLEHSWKALVHDGDTVSVHRPSFYAERFQRFMCNTAFKKIPLKPSPSKKSRSGTAVPRRSCQGGVPFQSHMSCETKAQVTTEVDVEQDLLPRTLPVDEANSDSVATTLSTSSLGSGGLNSPANSGSPGPSIPEHSSELREQFEDLQETEISF
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(273326..273328,273862..273946,277893..278001,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242))
location: region:273326-287242:-1
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278001:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:273326-273328:-1:exon

XP_035202295.1
type: Protein
SIO_000068: ncbiprotein

position:273326:-1
position: 273326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277893-278001:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273326-273328:-1:exon

PIP5K1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X3
translation: MPGSSGQPGSQTIKKGHRGVDSTGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHLKYDLKGSTYKRRASQKEREKVFPTYKDLDFMQDIPDGLFLDSDMYNALCKTLQRDCLVLQSFKIMDYSLLVAIHNIDLAQREHALADGTSQTDTRRPAAQKALYSTAMESIQGEARRGGTIETDDQMGGIPARNAKGERLLLYIGIIDVLQSYRFVKKLEHSWKALVHDGDTVSVHRPSFYAERFQRFMCNTAFKKIPLKPSPSKKSRSGTAVPRRSCQGGVPFQSHMSCETKAQVTTEVDVEQDLLPRTLPVDEANSDSVATTLSTSSLGSGGLNSPANRSVGVQVHKADSSAKDLTRAATGIFLPSGSPGPSIPEHSSELREQFEDLQETEISF
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(273326..273328,273862..273946,276845..276925,277893..278001,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242))
location: region:273326-287242:-1
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278001:-1:exon
so has part: feature:276845-276925:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:273326-273328:-1:exon

XP_035202292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277893-278001:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276845-276925:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273326-273328:-1:exon

PIP5K1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X4
translation: MPGSSGQPGSQTIKKGHRGVDSTGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHLKYDLKGSTYKRRASQKEREKVFPTYKDLDFMQDIPDGLFLDSDMYNALCKTLQRDCLVLQSFKIMDYSLLVAIHNIDLAQREHALADGTSQTDTRRPAAQKALYSTAMESIQGEARRGGTIETDDQMGGIPARNAKGERLLLYIGIIDVLQSYRFVKKLEHSWKALVHDGDTVSVHRPSFYAERFQRFMCNTAFKKIPLKPSPSKKSRSGTAVPRRSCQGGVPFQSHMSCETKAQVTTEVDVEQGSHLGRPDLLPRTLPVDEANSDSVATTLSTSSLGSGGLNSPANSGSPGPSIPEHSSELREQFEDLQETEISF
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(273326..273328,273862..273946,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242))
location: region:273326-287242:-1
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:273326-273328:-1:exon

XP_035202293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273326-273328:-1:exon

PIP5K1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1
translation: MPGSSGQPGSQTIKKGHRGVDSTGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHLKYDLKGSTYKRRASQKEREKVFPTYKDLDFMQDIPDGLFLDSDMYNALCKTLQRDCLVLQSFKIMDYSLLVAIHNIDLAQREHALADGTSQTDTRRPAAQKALYSTAMESIQGEARRGGTIETDDQMGGIPARNAKGERLLLYIGIIDVLQSYRFVKKLEHSWKALVHDGDTVSVHRPSFYAERFQRFMCNTAFKKIPLKPSPSKKSRSGTAVPRRSCQGGVPFQSHMSCETKAQVTTEVDVEQGSHLGRPDLLPRTLPVDEANSDSVATTLSTSSLGSGGLNSPANRSVGVQVHKADSSAKDLTRAATGIFLPSGSPGPSIPEHSSELREQFEDLQETEISF
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(273326..273328,273862..273946,276845..276925,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242))
location: region:273326-287242:-1
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:276845-276925:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:273326-273328:-1:exon

XP_035202289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276845-276925:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273326-273328:-1:exon

PIP5K1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1
translation: MPGSSGQPGSQTIKKGHRGVDSTGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHLKYDLKGSTYKRRASQKEREKVFPTYKDLDFMQDIPDGLFLDSDMYNALCKTLQRDCLVLQSFKIMDYSLLVAIHNIDLAQREHALADGTSQTDTRRPAAQKALYSTAMESIQGEARRGGTIETDDQMGGIPARNAKGERLLLYIGIIDVLQSYRFVKKLEHSWKALVHDGDTVSVHRPSFYAERFQRFMCNTAFKKIPLKPSPSKKSRSGTAVPRRSCQGGVPFQSHMSCETKAQVTTEVDVEQGSHLGRPDLLPRTLPVDEANSDSVATTLSTSSLGSGGLNSPANRSVGVQVHKADSSAKDLTRAATGIFLPSGSPGPSIPEHSSELREQFEDLQETEISF
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(273326..273328,273862..273946,276845..276925,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242))
location: region:273326-287242:-1
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:276845-276925:-1:exon
so has part: feature:273862-273946:-1:exon
so has part: feature:273326-273328:-1:exon

XP_035202290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276845-276925:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273862-273946:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273326-273328:-1:exon

PIP5K1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X7
translation: MPGSSGQPGSQTIKKGHRGVDSTGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHLKYDLKGSTYKRRASQKEREKVFPTYKDLDFMQDIPDGLFLDSDMYNALCKTLQRDCLVLQSFKIMDYSLLVAIHNIDLAQREHALADGTSQTDTRRPAAQKALYSTAMESIQGEARRGGTIETDDQMGGIPARNAKGERLLLYIGIIDVLQSYRFVKKLEHSWKALVHDGDTVSVHRPSFYAERFQRFMCNTAFKKIPLKPSPSKKSRSGTAVPRRSCQGGVPFQSHMSCETKAQVTTEVDVEQDLLPRTLPVDEANSDSVATTLSTSSLGSGGLNSPANRSPPSVFPAAPQGLQYPSTPQN
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(273903..273969,277893..278001,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242))
location: region:273903-287242:-1
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278001:-1:exon
so has part: feature:273903-273969:-1:exon

XP_035202296.1
type: Protein
SIO_000068: ncbiprotein

position:273903:-1
position: 273903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277893-278001:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273903-273969:-1:exon

PIP5K1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X5
translation: MPGSSGQPGSQTIKKGHRGVDSTGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHLKYDLKGSTYKRRASQKEREKVFPTYKDLDFMQDIPDGLFLDSDMYNALCKTLQRDCLVLQSFKIMDYSLLVAIHNIDLAQREHALADGTSQTDTRRPAAQKALYSTAMESIQGEARRGGTIETDDQMGGIPARNAKGERLLLYIGIIDVLQSYRFVKKLEHSWKALVHDGDTVSVHRPSFYAERFQRFMCNTAFKKIPLKPSPSKKSRSGTAVPRRSCQGGVPFQSHMSCETKAQVTTEVDVEQGSHLGRPDLLPRTLPVDEANSDSVATTLSTSSLGSGGLNSPANRSPPSVFPAAPQGLQYPSTPQN
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(273903..273969,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242))
location: region:273903-287242:-1
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:273903-273969:-1:exon

XP_035202294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273903-273969:-1:exon

PIP5K1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PIP5K1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X2
translation: MPGSSGQPGSQTIKKGHRGVDSTGETTYKKTTSSALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCSEPLIELSNSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHLKYDLKGSTYKRRASQKEREKVFPTYKDLDFMQDIPDGLFLDSDMYNALCKTLQRDCLVLQSFKIMDYSLLVAIHNIDLAQREHALADGTSQTDTRRPAAQKALYSTAMESIQGEARRGGTIETDDQMGGIPARNAKGERLLLYIGIIDVLQSYRFVKKLEHSWKALVHDGDTVSVHRPSFYAERFQRFMCNTAFKKIPLKPSPSKKSRSGTAVPRRSCQGGVPFQSHMSCETKAQVTTEVDVEQGSHLGRPDLLPRTLPVDEANSDSVATTLSTSSLGSGGLNSPANRSVGVQVHKADSSAKDLTRAATGIFLPRSPPSVFPAAPQGLQYPSTPQN
SIO_010081: PIP5K1A
subclass of: SO_0000673
so part of: PIP5K1A
location: complement(join(273903..273969,276845..276925,277893..278022,278433..278570,278889..278973,279349..279397,280352..280435,281088..281293,281858..282157,283313..283465,283684..283801,284205..284335,287153..287242))
location: region:273903-287242:-1
so has part: feature:287153-287242:-1:exon
so has part: feature:284205-284335:-1:exon
so has part: feature:283684-283801:-1:exon
so has part: feature:283313-283465:-1:exon
so has part: feature:281858-282157:-1:exon
so has part: feature:281088-281293:-1:exon
so has part: feature:280352-280435:-1:exon
so has part: feature:279349-279397:-1:exon
so has part: feature:278889-278973:-1:exon
so has part: feature:278433-278570:-1:exon
so has part: feature:277893-278022:-1:exon
so has part: feature:276845-276925:-1:exon
so has part: feature:273903-273969:-1:exon

XP_035202291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287153-287242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284205-284335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283684-283801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283313-283465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281858-282157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281088-281293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280352-280435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279349-279397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278889-278973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278433-278570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277893-278022:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276845-276925:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273903-273969:-1:exon

LOC118178135
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118178135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(284840..287137)
location: region:284840-287137:-1
so has part: feature:284840-287137:-1:exon
subclass of: SO_0000011

118178135
type: Gene
SIO_000068: ncbigene

position:284840:-1
position: 284840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287137:-1
position: 287137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284840-287137:-1:exon

LOC118178135
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118178135
product: uncharacterized LOC118178135
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_004756084.1
SIO_010081: LOC118178135
subclass of: SO_0000673
so part of: LOC118178135
location: complement(join(284840..285434,286771..287137))
location: region:284840-287137:-1
so has part: feature:286771-287137:-1:exon
so has part: feature:284840-285434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286771-287137:-1:exon

position:286771:-1
position: 286771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284840-285434:-1:exon

position:285434:-1
position: 285434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS72
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: VPS72
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296910..313403
location: region:296910-313403:1
so has part: feature:296910-313403:1:exon
subclass of: SO_0000010

118178132
type: Gene
SIO_000068: ncbigene

position:296910:1
position: 296910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313403:1
position: 313403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296910-313403:1:exon

VPS72
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: VPS72
product: vacuolar protein sorting 72 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_035346414.1
SIO_010081: VPS72
subclass of: SO_0000673
so part of: VPS72
location: join(296910..297061,297267..297419,297704..297815,297922..298101,298191..298332,312687..312695,312928..313403)
location: region:296910-313403:1
so has part: feature:296910-297061:1:exon
so has part: feature:297267-297419:1:exon
so has part: feature:297704-297815:1:exon
so has part: feature:297922-298101:1:exon
so has part: feature:298191-298332:1:exon
so has part: feature:312687-312695:1:exon
so has part: feature:312928-313403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296910-297061:1:exon

position:297061:1
position: 297061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297267-297419:1:exon

position:297267:1
position: 297267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297419:1
position: 297419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297704-297815:1:exon

position:297704:1
position: 297704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297815:1
position: 297815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:297922-298101:1:exon

position:297922:1
position: 297922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298101:1
position: 298101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:298191-298332:1:exon

position:298191:1
position: 298191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298332:1
position: 298332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312687-312695:1:exon

position:312687:1
position: 312687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312695:1
position: 312695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312928-313403:1:exon

position:312928:1
position: 312928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS72
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: VPS72
product: vacuolar protein sorting 72 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035346413.1
SIO_010081: VPS72
subclass of: SO_0000673
so part of: VPS72
location: join(296910..297061,297267..297419,297704..297815,297922..298101,298191..298332,298601..299133)
location: region:296910-299133:1
so has part: feature:296910-297061:1:exon
so has part: feature:297267-297419:1:exon
so has part: feature:297704-297815:1:exon
so has part: feature:297922-298101:1:exon
so has part: feature:298191-298332:1:exon
so has part: feature:298601-299133:1:exon

position:299133:1
position: 299133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296910-297061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297267-297419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297704-297815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297922-298101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298191-298332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298601-299133:1:exon

position:298601:1
position: 298601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS72
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: VPS72
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 72 homolog isoform X2
translation: MSLAEGRAPRRTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYRGDQSDSDDEVDSDFDIDEGEEPTSDQDESEPKRRRRIITKAYREPLKSLRPKKADAPSSSSQKAREVKSAPLELQDEVGDSRKHMRQSTTEHTRQTFLRIQERQVQSKRKKGGPNYDRPLTQEELLEEAKITEEINLRSLENYERLEADKKKQVQKKRKCVGPVIRYWSVTMPLITELGKEENVDVEGTKMGTAG
SIO_010081: VPS72
subclass of: SO_0000673
so part of: VPS72
location: join(296945..297061,297267..297419,297704..297815,297922..298101,298191..298332,312687..312695,312928..312943)
location: region:296945-312943:1
so has part: feature:296945-297061:1:exon
so has part: feature:297267-297419:1:exon
so has part: feature:297704-297815:1:exon
so has part: feature:297922-298101:1:exon
so has part: feature:298191-298332:1:exon
so has part: feature:312687-312695:1:exon
so has part: feature:312928-312943:1:exon

XP_035202305.1
type: Protein
SIO_000068: ncbiprotein

position:296945:1
position: 296945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312943:1
position: 312943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296945-297061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297267-297419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297704-297815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297922-298101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298191-298332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312687-312695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312928-312943:1:exon

VPS72
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: VPS72
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 72 homolog isoform X1
translation: MSLAEGRAPRRTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYRGDQSDSDDEVDSDFDIDEGEEPTSDQDESEPKRRRRIITKAYREPLKSLRPKKADAPSSSSQKAREVKSAPLELQDEVGDSRKHMRQSTTEHTRQTFLRIQERQVQSKRKKGGPNYDRPLTQEELLEEAKITEEINLRSLENYERLEADKKKQVQKKRKCVGPVIRYWSVTMPLITELGKEENVDVEGLDQDLQQAEAAPAVAPASAGKCSRTFISFTDDETFERFFPKAKPPRLPVREICPVTHKPAVYRDPITDIPYSNIRAFKIIREAYKKYITAHGLPSAAATAALGAAPPGPDPGVRATRQKIIIKQSVPAT
SIO_010081: VPS72
subclass of: SO_0000673
so part of: VPS72
location: join(296945..297061,297267..297419,297704..297815,297922..298101,298191..298332,298601..298991)
location: region:296945-298991:1
so has part: feature:296945-297061:1:exon
so has part: feature:297267-297419:1:exon
so has part: feature:297704-297815:1:exon
so has part: feature:297922-298101:1:exon
so has part: feature:298191-298332:1:exon
so has part: feature:298601-298991:1:exon

XP_035202304.1
type: Protein
SIO_000068: ncbiprotein

position:298991:1
position: 298991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296945-297061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297267-297419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297704-297815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297922-298101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:298191-298332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298601-298991:1:exon

TMOD4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TMOD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 299681..303480
location: region:299681-303480:1
so has part: feature:299681-303480:1:exon
subclass of: SO_0000010

118178133
type: Gene
SIO_000068: ncbigene

position:299681:1
position: 299681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303480:1
position: 303480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299681-303480:1:exon

TMOD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMOD4
product: tropomodulin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_035346415.1
SIO_010081: TMOD4
subclass of: SO_0000673
so part of: TMOD4
location: join(299681..299826,300422..300565,300657..300813,301199..301321,301613..301702,301905..302035,302571..302678,302880..303023,303113..303257,303348..303480)
location: region:299681-303480:1
so has part: feature:299681-299826:1:exon
so has part: feature:300422-300565:1:exon
so has part: feature:300657-300813:1:exon
so has part: feature:301199-301321:1:exon
so has part: feature:301613-301702:1:exon
so has part: feature:301905-302035:1:exon
so has part: feature:302571-302678:1:exon
so has part: feature:302880-303023:1:exon
so has part: feature:303113-303257:1:exon
so has part: feature:303348-303480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299681-299826:1:exon

position:299826:1
position: 299826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300422-300565:1:exon

position:300422:1
position: 300422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300565:1
position: 300565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300657-300813:1:exon

position:300657:1
position: 300657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300813:1
position: 300813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301199-301321:1:exon

position:301199:1
position: 301199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301321:1
position: 301321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301613-301702:1:exon

position:301613:1
position: 301613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301702:1
position: 301702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:301905-302035:1:exon

position:301905:1
position: 301905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302035:1
position: 302035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302571-302678:1:exon

position:302571:1
position: 302571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302678:1
position: 302678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:302880-303023:1:exon

position:302880:1
position: 302880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303023:1
position: 303023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:303113-303257:1:exon

position:303113:1
position: 303113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303257:1
position: 303257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:303348-303480:1:exon

position:303348:1
position: 303348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMOD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMOD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomodulin-4
translation: MTSYRQELEKYRDIDEDKILRELSAEELEQLDTELMEMDPENVLLPAGLRQRDQTQKSPTGPLDREALLQHLEKQALEAGEREDLVPFTGEKKGKPFVPKNPKREIPREEQITLEPELEEALANATEAEMCDIAAILGMYTLMSNKQYYDAICSGTISNTEGINSVVKPDTYKPVPDEPPNPTNVEETLRQIQANDGALEDVNLNNIKDIPISTLKAICEAMKTNTHVKKLSLVATRSNDPVATAVAEMLTENKTLQSLNIESNFITSAGMMSIIKAMHRNSTLSELKVDNQCQRLGDTVEMEMATMLEQCPSVVRFGYHFTQQGPRARAAIAITRNNELRRKQKKT
SIO_010081: TMOD4
subclass of: SO_0000673
so part of: TMOD4
location: join(300443..300565,300657..300813,301199..301321,301613..301702,301905..302035,302571..302678,302880..303023,303113..303257,303348..303370)
location: region:300443-303370:1
so has part: feature:300443-300565:1:exon
so has part: feature:300657-300813:1:exon
so has part: feature:301199-301321:1:exon
so has part: feature:301613-301702:1:exon
so has part: feature:301905-302035:1:exon
so has part: feature:302571-302678:1:exon
so has part: feature:302880-303023:1:exon
so has part: feature:303113-303257:1:exon
so has part: feature:303348-303370:1:exon

XP_035202306.1
type: Protein
SIO_000068: ncbiprotein

position:300443:1
position: 300443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303370:1
position: 303370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300443-300565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300657-300813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301199-301321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301613-301702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301905-302035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302571-302678:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302880-303023:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303113-303257:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:303348-303370:1:exon

SCNM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SCNM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(304341..311897)
location: region:304341-311897:-1
so has part: feature:304341-311897:-1:exon
subclass of: SO_0000010

118178285
type: Gene
SIO_000068: ncbigene

position:304341:-1
position: 304341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311897:-1
position: 311897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304341-311897:-1:exon

SCNM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCNM1
product: sodium channel modifier 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346683.1
SIO_010081: SCNM1
subclass of: SO_0000673
so part of: SCNM1
location: complement(join(304341..304647,304717..304852,304945..305078,305185..305279,305351..305448,305537..305681,311709..311897))
location: region:304341-311897:-1
so has part: feature:311709-311897:-1:exon
so has part: feature:305537-305681:-1:exon
so has part: feature:305351-305448:-1:exon
so has part: feature:305185-305279:-1:exon
so has part: feature:304945-305078:-1:exon
so has part: feature:304717-304852:-1:exon
so has part: feature:304341-304647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311709-311897:-1:exon

position:311709:-1
position: 311709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305537-305681:-1:exon

position:305537:-1
position: 305537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305681:-1
position: 305681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305351-305448:-1:exon

position:305351:-1
position: 305351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305448:-1
position: 305448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:305185-305279:-1:exon

position:305185:-1
position: 305185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305279:-1
position: 305279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:304945-305078:-1:exon

position:304945:-1
position: 304945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305078:-1
position: 305078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:304717-304852:-1:exon

position:304717:-1
position: 304717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304852:-1
position: 304852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:304341-304647:-1:exon

position:304647:-1
position: 304647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCNM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCNM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel modifier 1
translation: MRARPRATPGGLAAVPAIPASECLCARGRRGGGGAVRGHVETPGCPIPGGQGDAGQRDARLHPGTAGVGGCGVLTAPPPRYRYACTVCAHRPVFDTLEVLAVHRAGRKHLDSLQRCYGSERWREDTVREQRHEELVGVEVAGAQGSPAPLLARTRRIAQSALLKAAPYSSCCRRTGAAGSAARGARTQPGPSTAQAPSQDRDAVEATPAALLPGHRSRQAGALKAASTHPSRGRKGKAASSSPPSQPEALSPARRQALERYLQLRSAGWIQDRSGKWVKDENAEFDSDEDEPPALLPA
SIO_010081: SCNM1
subclass of: SO_0000673
so part of: SCNM1
location: complement(join(304548..304647,304717..304852,304945..305078,305185..305279,305351..305448,305537..305681,311709..311897))
location: region:304548-311897:-1
so has part: feature:311709-311897:-1:exon
so has part: feature:305537-305681:-1:exon
so has part: feature:305351-305448:-1:exon
so has part: feature:305185-305279:-1:exon
so has part: feature:304945-305078:-1:exon
so has part: feature:304717-304852:-1:exon
so has part: feature:304548-304647:-1:exon

XP_035202574.1
type: Protein
SIO_000068: ncbiprotein

position:304548:-1
position: 304548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311709-311897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305537-305681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305351-305448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305185-305279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304945-305078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304717-304852:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304548-304647:-1:exon

GABPB2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: GABPB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(314130..329441)
location: region:314130-329441:-1
so has part: feature:314130-329441:-1:exon
subclass of: SO_0000010

118178131
type: Gene
SIO_000068: ncbigene

position:314130:-1
position: 314130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329441:-1
position: 329441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314130-329441:-1:exon

GABPB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GABPB2
product: GA binding protein transcription factor subunit beta 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_035346412.1
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(314130..317037,317864..317997,319499..319684,323879..324029,325286..325480,325830..325997,327121..327260,327528..327590,329408..329441))
location: region:314130-329441:-1
so has part: feature:329408-329441:-1:exon
so has part: feature:327528-327590:-1:exon
so has part: feature:327121-327260:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:314130-317037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329408-329441:-1:exon

position:329408:-1
position: 329408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327528-327590:-1:exon

position:327528:-1
position: 327528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327590:-1
position: 327590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327121-327260:-1:exon

position:327121:-1
position: 327121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327260:-1
position: 327260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:325830-325997:-1:exon

position:325830:-1
position: 325830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325997:-1
position: 325997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:325286-325480:-1:exon

position:325286:-1
position: 325286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325480:-1
position: 325480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:323879-324029:-1:exon

position:323879:-1
position: 323879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324029:-1
position: 324029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319499-319684:-1:exon

position:319499:-1
position: 319499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319684:-1
position: 319684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:317864-317997:-1:exon

position:317864:-1
position: 317864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317997:-1
position: 317997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:314130-317037:-1:exon

position:317037:-1
position: 317037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GABPB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GABPB2
product: GA binding protein transcription factor subunit beta 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_035346411.1
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(314130..317037,317864..317997,319499..319684,321104..321217,323879..324029,325286..325480,325830..325997,327121..327260,327528..327590,329408..329441))
location: region:314130-329441:-1
so has part: feature:329408-329441:-1:exon
so has part: feature:327528-327590:-1:exon
so has part: feature:327121-327260:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321217:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:314130-317037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329408-329441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327528-327590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327121-327260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321104-321217:-1:exon

position:321104:-1
position: 321104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321217:-1
position: 321217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314130-317037:-1:exon

GABPB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GABPB2
product: GA binding protein transcription factor subunit beta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035346407.1
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(314130..317037,317864..317997,319499..319684,321104..321220,323879..324029,325286..325480,325830..325997,327121..327260,327528..327590,329408..329441))
location: region:314130-329441:-1
so has part: feature:329408-329441:-1:exon
so has part: feature:327528-327590:-1:exon
so has part: feature:327121-327260:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321220:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:314130-317037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329408-329441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327528-327590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327121-327260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321104-321220:-1:exon

position:321220:-1
position: 321220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314130-317037:-1:exon

GABPB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GABPB2
product: GA binding protein transcription factor subunit beta 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035346410.1
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(314130..317037,317864..317997,319499..319684,321104..321220,323879..324029,325286..325480,325830..325997,327121..327263,327528..327590,329408..329436))
location: region:314130-329436:-1
so has part: feature:329408-329436:-1:exon
so has part: feature:327528-327590:-1:exon
so has part: feature:327121-327263:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321220:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:314130-317037:-1:exon

position:329436:-1
position: 329436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329408-329436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327528-327590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327121-327263:-1:exon

position:327263:-1
position: 327263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321104-321220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314130-317037:-1:exon

GABPB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GABPB2
product: GA binding protein transcription factor subunit beta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035346408.1
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(314130..317037,317864..317997,319499..319684,321104..321220,323879..324029,325286..325480,325830..325997,327121..327260,327528..328381))
location: region:314130-328381:-1
so has part: feature:327528-328381:-1:exon
so has part: feature:327121-327260:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321220:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:314130-317037:-1:exon

position:328381:-1
position: 328381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327528-328381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327121-327260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:321104-321220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314130-317037:-1:exon

GABPB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GABPB2
product: GA binding protein transcription factor subunit beta 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035346409.1
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(314130..317037,317864..317997,319499..319684,321104..321220,323879..324029,325286..325480,325830..325997,327121..327263,327528..328381))
location: region:314130-328381:-1
so has part: feature:327528-328381:-1:exon
so has part: feature:327121-327263:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321220:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:314130-317037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327528-328381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327121-327263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:321104-321220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314130-317037:-1:exon

GABPB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GABPB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2 isoform X3
translation: MSLVDLGKRLLEAARKGEDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHTHIVELLIRNGADVNAKDMLKMTALHWATEHNHRDVVELLIKYGADVHAFSKFDKSAFDIALDKNNPETLVILQEAMQNQVNTHPERAHPVTNTVTVTSPFILAPGEILNLASLVSSANAKTTSGNTEEIVEATSVDSAIQQVVGSGGQRVITIVTDGVPLGTLQTAVPTSGLSQPFIVTMEDGQQVLTVPAGQVAEETVIEDGDDAEEEEEPLAKKQKVEQNVNDSEESKDSDEREVLQQQLQEANRKAQEYRSQLMKKEQEAEQYRLKLAAMVRQQPNGAEVAVLEDVAEVDAVVVTSEDIEGSALPMMEMDQPTDVTVETVTS
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(316750..317037,317864..317997,319499..319684,323879..324029,325286..325480,325830..325997,327121..327228))
location: region:316750-327228:-1
so has part: feature:327121-327228:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:316750-317037:-1:exon

XP_035202303.1
type: Protein
SIO_000068: ncbiprotein

position:316750:-1
position: 316750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327228:-1
position: 327228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327121-327228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316750-317037:-1:exon

GABPB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GABPB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2 isoform X2
translation: MSLVDLGKRLLEAARKGEDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHTHIVELLIRNGADVNAKDMLKMTALHWATEHNHRDVVELLIKYGADVHAFSKFDKSAFDIALDKNNPETLVILQEAMQNQVNTHPERAHPVTNTVTVTSPFILAPGEILNLASLVSSANAKTTSGDSHVSTVQFSNSTTSVLATLAALAEASAPLSNSNRATGNTEEIVEATSVDSAIQQVVGSGGQRVITIVTDGVPLGTLQTAVPTSGLSQPFIVTMEDGQQVLTVPAGQVAEETVIEDGDDAEEEEEPLAKKQKVEQNVNDSEESKDSDEREVLQQQLQEANRKAQEYRSQLMKKEQEAEQYRLKLAAMVRQQPNGAEVAVLEDVAEVDAVVVTSEDIEGSALPMMEMDQPTDVTVETVTS
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(316750..317037,317864..317997,319499..319684,321104..321217,323879..324029,325286..325480,325830..325997,327121..327228))
location: region:316750-327228:-1
so has part: feature:327121-327228:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321217:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:316750-317037:-1:exon

XP_035202302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327121-327228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321104-321217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316750-317037:-1:exon

GABPB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GABPB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2 isoform X1
translation: MSLVDLGKRLLEAARKGEDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHTHIVELLIRNGADVNAKDMLKMTALHWATEHNHRDVVELLIKYGADVHAFSKFDKSAFDIALDKNNPETLVILQEAMQNQVNTHPERAHPVTNTVTVTSPFILAPGEILNLASLVSSANAKTTSAGDSHVSTVQFSNSTTSVLATLAALAEASAPLSNSNRATGNTEEIVEATSVDSAIQQVVGSGGQRVITIVTDGVPLGTLQTAVPTSGLSQPFIVTMEDGQQVLTVPAGQVAEETVIEDGDDAEEEEEPLAKKQKVEQNVNDSEESKDSDEREVLQQQLQEANRKAQEYRSQLMKKEQEAEQYRLKLAAMVRQQPNGAEVAVLEDVAEVDAVVVTSEDIEGSALPMMEMDQPTDVTVETVTS
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(316750..317037,317864..317997,319499..319684,321104..321220,323879..324029,325286..325480,325830..325997,327121..327228))
location: region:316750-327228:-1
so has part: feature:327121-327228:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321220:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:316750-317037:-1:exon

XP_035202298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327121-327228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321104-321220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316750-317037:-1:exon

GABPB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GABPB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2 isoform X1
translation: MSLVDLGKRLLEAARKGEDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHTHIVELLIRNGADVNAKDMLKMTALHWATEHNHRDVVELLIKYGADVHAFSKFDKSAFDIALDKNNPETLVILQEAMQNQVNTHPERAHPVTNTVTVTSPFILAPGEILNLASLVSSANAKTTSAGDSHVSTVQFSNSTTSVLATLAALAEASAPLSNSNRATGNTEEIVEATSVDSAIQQVVGSGGQRVITIVTDGVPLGTLQTAVPTSGLSQPFIVTMEDGQQVLTVPAGQVAEETVIEDGDDAEEEEEPLAKKQKVEQNVNDSEESKDSDEREVLQQQLQEANRKAQEYRSQLMKKEQEAEQYRLKLAAMVRQQPNGAEVAVLEDVAEVDAVVVTSEDIEGSALPMMEMDQPTDVTVETVTS
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(316750..317037,317864..317997,319499..319684,321104..321220,323879..324029,325286..325480,325830..325997,327121..327228))
location: region:316750-327228:-1
so has part: feature:327121-327228:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321220:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:316750-317037:-1:exon

XP_035202299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327121-327228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321104-321220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316750-317037:-1:exon

GABPB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GABPB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2 isoform X1
translation: MSLVDLGKRLLEAARKGEDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHTHIVELLIRNGADVNAKDMLKMTALHWATEHNHRDVVELLIKYGADVHAFSKFDKSAFDIALDKNNPETLVILQEAMQNQVNTHPERAHPVTNTVTVTSPFILAPGEILNLASLVSSANAKTTSAGDSHVSTVQFSNSTTSVLATLAALAEASAPLSNSNRATGNTEEIVEATSVDSAIQQVVGSGGQRVITIVTDGVPLGTLQTAVPTSGLSQPFIVTMEDGQQVLTVPAGQVAEETVIEDGDDAEEEEEPLAKKQKVEQNVNDSEESKDSDEREVLQQQLQEANRKAQEYRSQLMKKEQEAEQYRLKLAAMVRQQPNGAEVAVLEDVAEVDAVVVTSEDIEGSALPMMEMDQPTDVTVETVTS
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(316750..317037,317864..317997,319499..319684,321104..321220,323879..324029,325286..325480,325830..325997,327121..327228))
location: region:316750-327228:-1
so has part: feature:327121-327228:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321220:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:316750-317037:-1:exon

XP_035202300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327121-327228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321104-321220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316750-317037:-1:exon

GABPB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GABPB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2 isoform X1
translation: MSLVDLGKRLLEAARKGEDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHTHIVELLIRNGADVNAKDMLKMTALHWATEHNHRDVVELLIKYGADVHAFSKFDKSAFDIALDKNNPETLVILQEAMQNQVNTHPERAHPVTNTVTVTSPFILAPGEILNLASLVSSANAKTTSAGDSHVSTVQFSNSTTSVLATLAALAEASAPLSNSNRATGNTEEIVEATSVDSAIQQVVGSGGQRVITIVTDGVPLGTLQTAVPTSGLSQPFIVTMEDGQQVLTVPAGQVAEETVIEDGDDAEEEEEPLAKKQKVEQNVNDSEESKDSDEREVLQQQLQEANRKAQEYRSQLMKKEQEAEQYRLKLAAMVRQQPNGAEVAVLEDVAEVDAVVVTSEDIEGSALPMMEMDQPTDVTVETVTS
SIO_010081: GABPB2
subclass of: SO_0000673
so part of: GABPB2
location: complement(join(316750..317037,317864..317997,319499..319684,321104..321220,323879..324029,325286..325480,325830..325997,327121..327228))
location: region:316750-327228:-1
so has part: feature:327121-327228:-1:exon
so has part: feature:325830-325997:-1:exon
so has part: feature:325286-325480:-1:exon
so has part: feature:323879-324029:-1:exon
so has part: feature:321104-321220:-1:exon
so has part: feature:319499-319684:-1:exon
so has part: feature:317864-317997:-1:exon
so has part: feature:316750-317037:-1:exon

XP_035202301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327121-327228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325830-325997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325286-325480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323879-324029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321104-321220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319499-319684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317864-317997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316750-317037:-1:exon

MLLT11
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MLLT11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(333186..335663)
location: region:333186-335663:-1
so has part: feature:333186-335663:-1:exon
subclass of: SO_0000010

118178270
type: Gene
SIO_000068: ncbigene

position:333186:-1
position: 333186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335663:-1
position: 335663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333186-335663:-1:exon

MLLT11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MLLT11
product: MLLT11 transcription factor 7 cofactor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035346648.1
SIO_010081: MLLT11
subclass of: SO_0000673
so part of: MLLT11
location: complement(join(333186..334344,335303..335663))
location: region:333186-335663:-1
so has part: feature:335303-335663:-1:exon
so has part: feature:333186-334344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335303-335663:-1:exon

position:335303:-1
position: 335303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333186-334344:-1:exon

position:334344:-1
position: 334344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLLT11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MLLT11
product: MLLT11 transcription factor 7 cofactor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_035346649.1
SIO_010081: MLLT11
subclass of: SO_0000673
so part of: MLLT11
location: complement(join(333186..334344,334770..334917))
location: region:333186-334917:-1
so has part: feature:334770-334917:-1:exon
so has part: feature:333186-334344:-1:exon

position:334917:-1
position: 334917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334770-334917:-1:exon

position:334770:-1
position: 334770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333186-334344:-1:exon

MLLT11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MLLT11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF1q
translation: MLDTISNQYDSFIYWRMPIPRLELAELEGLGLGEGPLYTPRTGLAKLPGPREAAAQGSSAEEDSLLPFNSFNFWRAPIASISSFDFDLI
SIO_010081: MLLT11
subclass of: SO_0000673
so part of: MLLT11
location: complement(334068..334337)
location: region:334068-334337:-1
so has part: feature:334068-334337:-1:exon

XP_035202539.1
type: Protein
SIO_000068: ncbiprotein

position:334068:-1
position: 334068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334337:-1
position: 334337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334068-334337:-1:exon

MLLT11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MLLT11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF1q
translation: MLDTISNQYDSFIYWRMPIPRLELAELEGLGLGEGPLYTPRTGLAKLPGPREAAAQGSSAEEDSLLPFNSFNFWRAPIASISSFDFDLI
SIO_010081: MLLT11
subclass of: SO_0000673
so part of: MLLT11
location: complement(334068..334337)
location: region:334068-334337:-1
so has part: feature:334068-334337:-1:exon

XP_035202540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334068-334337:-1:exon

CERS2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CERS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 337269..360019
location: region:337269-360019:1
so has part: feature:337269-360019:1:exon
subclass of: SO_0000010

118178229
type: Gene
SIO_000068: ncbigene

position:337269:1
position: 337269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360019:1
position: 360019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337269-360019:1:exon

CERS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CERS2
product: ceramide synthase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_035346575.1
SIO_010081: CERS2
subclass of: SO_0000673
so part of: CERS2
location: join(337269..337296,344140..344160,355624..355797,356491..356608,356701..356819,357026..357083,357166..357216,357482..357574,357788..357916,358000..358106,358216..358369,358683..360019)
location: region:337269-360019:1
so has part: feature:337269-337296:1:exon
so has part: feature:344140-344160:1:exon
so has part: feature:355624-355797:1:exon
so has part: feature:356491-356608:1:exon
so has part: feature:356701-356819:1:exon
so has part: feature:357026-357083:1:exon
so has part: feature:357166-357216:1:exon
so has part: feature:357482-357574:1:exon
so has part: feature:357788-357916:1:exon
so has part: feature:358000-358106:1:exon
so has part: feature:358216-358369:1:exon
so has part: feature:358683-360019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337269-337296:1:exon

position:337296:1
position: 337296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344140-344160:1:exon

position:344140:1
position: 344140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344160:1
position: 344160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:355624-355797:1:exon

position:355624:1
position: 355624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355797:1
position: 355797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:356491-356608:1:exon

position:356491:1
position: 356491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356608:1
position: 356608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:356701-356819:1:exon

position:356701:1
position: 356701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356819:1
position: 356819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:357026-357083:1:exon

position:357026:1
position: 357026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357083:1
position: 357083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357166-357216:1:exon

position:357166:1
position: 357166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357216:1
position: 357216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:357482-357574:1:exon

position:357482:1
position: 357482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357574:1
position: 357574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:357788-357916:1:exon

position:357788:1
position: 357788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357916:1
position: 357916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:358000-358106:1:exon

position:358000:1
position: 358000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358106:1
position: 358106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:358216-358369:1:exon

position:358216:1
position: 358216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358369:1
position: 358369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:358683-360019:1:exon

position:358683:1
position: 358683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC42SE1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CDC42SE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 337411..339177
location: region:337411-339177:1
so has part: feature:337411-339177:1:exon
subclass of: SO_0000010

118178231
type: Gene
SIO_000068: ncbigene

position:337411:1
position: 337411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339177:1
position: 339177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337411-339177:1:exon

CDC42SE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CDC42SE1
product: CDC42 small effector 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035346579.1
SIO_010081: CDC42SE1
subclass of: SO_0000673
so part of: CDC42SE1
location: join(337411..337541,337618..337728,337991..338065,338202..339177)
location: region:337411-339177:1
so has part: feature:337411-337541:1:exon
so has part: feature:337618-337728:1:exon
so has part: feature:337991-338065:1:exon
so has part: feature:338202-339177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337411-337541:1:exon

position:337541:1
position: 337541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337618-337728:1:exon

position:337618:1
position: 337618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337728:1
position: 337728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337991-338065:1:exon

position:337991:1
position: 337991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338065:1
position: 338065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:338202-339177:1:exon

position:338202:1
position: 338202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC42SE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CDC42SE1
product: CDC42 small effector 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_035346578.1
SIO_010081: CDC42SE1
subclass of: SO_0000673
so part of: CDC42SE1
location: join(337411..337541,337618..337813,337875..337894)
location: region:337411-337894:1
so has part: feature:337411-337541:1:exon
so has part: feature:337618-337813:1:exon
so has part: feature:337875-337894:1:exon

position:337894:1
position: 337894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337411-337541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337618-337813:1:exon

position:337813:1
position: 337813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337875-337894:1:exon

position:337875:1
position: 337875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC42SE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CDC42SE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDC42 small effector protein 1 isoform X2
translation: MSDFWHKLGCCVVEKPQPKKRRRRIDRSMIGEPMNFVHLTHIGSGDMAAGEGLPMTGAVQEMRSKGGRERQWTSSRVL
SIO_010081: CDC42SE1
subclass of: SO_0000673
so part of: CDC42SE1
location: join(337488..337541,337618..337728,337991..338062)
location: region:337488-338062:1
so has part: feature:337488-337541:1:exon
so has part: feature:337618-337728:1:exon
so has part: feature:337991-338062:1:exon

XP_035202470.1
type: Protein
SIO_000068: ncbiprotein

position:337488:1
position: 337488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338062:1
position: 338062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337488-337541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337618-337728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337991-338062:1:exon

CDC42SE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CDC42SE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDC42 small effector protein 1 isoform X1
translation: MSDFWHKLGCCVVEKPQPKKRRRRIDRSMIGEPMNFVHLTHIGSGDMAAGEGLPMVRRLHAGLGSGRCCWTGGIVAGWWVSRRG
SIO_010081: CDC42SE1
subclass of: SO_0000673
so part of: CDC42SE1
location: join(337488..337541,337618..337813,337875..337879)
location: region:337488-337879:1
so has part: feature:337488-337541:1:exon
so has part: feature:337618-337813:1:exon
so has part: feature:337875-337879:1:exon

XP_035202469.1
type: Protein
SIO_000068: ncbiprotein

position:337879:1
position: 337879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337488-337541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337618-337813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337875-337879:1:exon

PRUNE1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PRUNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(339729..355753)
location: region:339729-355753:-1
so has part: feature:339729-355753:-1:exon
subclass of: SO_0000010

118178228
type: Gene
SIO_000068: ncbigene

position:339729:-1
position: 339729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355753:-1
position: 355753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339729-355753:-1:exon

PRUNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PRUNE1
product: prune exopolyphosphatase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346574.1
SIO_010081: PRUNE1
subclass of: SO_0000673
so part of: PRUNE1
location: complement(join(339729..340382,340556..340714,340797..340891,341019..341177,341246..341424,341644..341849,341924..342028,344104..344160,355624..355753))
location: region:339729-355753:-1
so has part: feature:355624-355753:-1:exon
so has part: feature:344104-344160:-1:exon
so has part: feature:341924-342028:-1:exon
so has part: feature:341644-341849:-1:exon
so has part: feature:341246-341424:-1:exon
so has part: feature:341019-341177:-1:exon
so has part: feature:340797-340891:-1:exon
so has part: feature:340556-340714:-1:exon
so has part: feature:339729-340382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355624-355753:-1:exon

position:355624:-1
position: 355624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344104-344160:-1:exon

position:344104:-1
position: 344104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344160:-1
position: 344160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341924-342028:-1:exon

position:341924:-1
position: 341924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342028:-1
position: 342028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:341644-341849:-1:exon

position:341644:-1
position: 341644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341849:-1
position: 341849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:341246-341424:-1:exon

position:341246:-1
position: 341246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341424:-1
position: 341424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:341019-341177:-1:exon

position:341019:-1
position: 341019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341177:-1
position: 341177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:340797-340891:-1:exon

position:340797:-1
position: 340797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340891:-1
position: 340891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:340556-340714:-1:exon

position:340556:-1
position: 340556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340714:-1
position: 340714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:339729-340382:-1:exon

position:340382:-1
position: 340382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRUNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PRUNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exopolyphosphatase PRUNE1
translation: MAAAAAAMERFVEGRRAALQEHIQCRQEVHVVMGNEACDLDSAVSALALAYFLAKTSSPPKAAFIPVLNIPRSDFALRTETTFLLREQGIAETSLIFRDEIDLAELHQAGLLSLTLVDHHVLPSTDAALEEAVVDVLDHRPLERAPSCQFTVELVGSCATLVTERIAQGPPGVLDRTTAALLHGTILLDSVNLSPAAGKVTPRDVACISLLESRFPELPAHNTIYEALQAAKFDVSELTTEQMLRKDLKTLSNDELVLAISGIYIDLETFLHRPNLLQDLEAFCQARGYAGLVAMTVSFNERYEPTRQLAVYSQHDALRSTVCQMLEEATAPSLHLQPLPSPWPCVRAYAQGNALASRKKVLPILRAVLGGLGATAGLEEDTALPPTPMNSLVDESPLAQAVPPLCPQAVLERVSRMAAEQPPDPDK
SIO_010081: PRUNE1
subclass of: SO_0000673
so part of: PRUNE1
location: complement(join(340062..340382,340556..340714,340797..340891,341019..341177,341246..341424,341644..341849,341924..342028,344104..344160,355624..355626))
location: region:340062-355626:-1
so has part: feature:355624-355626:-1:exon
so has part: feature:344104-344160:-1:exon
so has part: feature:341924-342028:-1:exon
so has part: feature:341644-341849:-1:exon
so has part: feature:341246-341424:-1:exon
so has part: feature:341019-341177:-1:exon
so has part: feature:340797-340891:-1:exon
so has part: feature:340556-340714:-1:exon
so has part: feature:340062-340382:-1:exon

XP_035202465.1
type: Protein
SIO_000068: ncbiprotein

position:340062:-1
position: 340062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355626:-1
position: 355626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355624-355626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344104-344160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341924-342028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341644-341849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:341246-341424:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341019-341177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340797-340891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:340556-340714:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340062-340382:-1:exon

CERS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CERS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 2 isoform X1
translation: MAAAAAAMFQTLYSYFWWERLWLPANLTWADLEDRDGRVYAKASDLYITIPLAFLFLIVRHLFETYVATPLAGLLNVKEKIRLKATPNAVLEKFYAATTKHPKQADVEMLSKKSGCTVRQVERWFRRRRNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDLREVWKGYPIQSMLPSQYWYYMIELSFYWSLLFSIASDVKRKDFKEQIIHHVATIILISFSWFANYIRAGTLIMALHDSSDYLLESAKMFNYAGWRNTCNNIFIVFAAVFIVTRLVILPFWIMHCTVVYPLDLYPAFFGYYFFNFMMAVLQSLHIFWAYLIIRMAQKFITGKVVEDERSDREETDNSEEEDEVAKNGPLSNGHPVLNNNHRKND
SIO_010081: CERS2
subclass of: SO_0000673
so part of: CERS2
location: join(344141..344160,355624..355797,356491..356608,356701..356819,357026..357083,357166..357216,357482..357574,357788..357916,358000..358106,358216..358369,358683..358811)
location: region:344141-358811:1
so has part: feature:344141-344160:1:exon
so has part: feature:355624-355797:1:exon
so has part: feature:356491-356608:1:exon
so has part: feature:356701-356819:1:exon
so has part: feature:357026-357083:1:exon
so has part: feature:357166-357216:1:exon
so has part: feature:357482-357574:1:exon
so has part: feature:357788-357916:1:exon
so has part: feature:358000-358106:1:exon
so has part: feature:358216-358369:1:exon
so has part: feature:358683-358811:1:exon

XP_035202466.1
type: Protein
SIO_000068: ncbiprotein

position:344141:1
position: 344141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358811:1
position: 358811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344141-344160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:355624-355797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356491-356608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356701-356819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357026-357083:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357166-357216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357482-357574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357788-357916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:358000-358106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358216-358369:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358683-358811:1:exon

MINDY1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MINDY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 348661..353033
location: region:348661-353033:1
so has part: feature:348661-353033:1:exon
subclass of: SO_0000010

118178227
type: Gene
SIO_000068: ncbigene

position:348661:1
position: 348661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353033:1
position: 353033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348661-353033:1:exon

MINDY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MINDY1
product: MINDY lysine 48 deubiquitinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035346573.1
SIO_010081: MINDY1
subclass of: SO_0000673
so part of: MINDY1
location: join(348661..350242,350521..350578,350964..351028,351255..351413,351734..351836,351919..352061,352205..352384,352516..352662,352832..353033)
location: region:348661-353033:1
so has part: feature:348661-350242:1:exon
so has part: feature:350521-350578:1:exon
so has part: feature:350964-351028:1:exon
so has part: feature:351255-351413:1:exon
so has part: feature:351734-351836:1:exon
so has part: feature:351919-352061:1:exon
so has part: feature:352205-352384:1:exon
so has part: feature:352516-352662:1:exon
so has part: feature:352832-353033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348661-350242:1:exon

position:350242:1
position: 350242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350521-350578:1:exon

position:350521:1
position: 350521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350578:1
position: 350578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:350964-351028:1:exon

position:350964:1
position: 350964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351028:1
position: 351028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:351255-351413:1:exon

position:351255:1
position: 351255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351413:1
position: 351413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:351734-351836:1:exon

position:351734:1
position: 351734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351836:1
position: 351836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:351919-352061:1:exon

position:351919:1
position: 351919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352061:1
position: 352061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:352205-352384:1:exon

position:352205:1
position: 352205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352384:1
position: 352384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:352516-352662:1:exon

position:352516:1
position: 352516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352662:1
position: 352662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:352832-353033:1:exon

position:352832:1
position: 352832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MINDY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MINDY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase MINDY-1
translation: MELQPEQGEVLLTTGDGTRCQETNSELCQLPRGAGEAGGGEDVPAVSQESREADGRGQALQPGEEDVLGPGNKKAPEEQQESEDGKVQDSQEELPAPGESDTSPGGASQPAGEPPSTRPPAREREPEPDFYCVKWITWKGERTPIITQSENGPCPLLAIMNILFLQWKVKLPLQKEVVTSDELMAHLGDCILSIKPQEKSEGLQLNFQQNVNDTMMVLPKLSTGLDVNVRFTGVSDFEYTPECIVFDLLNVPLYHGWLVDPQSPEVVQAVGKLSYNQLVEKIITCKHSCDSNLVTEGLIAEQFLESTASQLTYHGLCELTAAVKEEELSVFFRNNHFSTMIKHKGHLYLLVTDQGFLQEERVVWESLHNVDGDSCFCDTDFHLSHALGKEAAAAAPPEQRQVDQDYMIALSLQQQQGQGPSTLSDLELARQLQQEEYQQQQQQQPRPAPAPAQGRAQPGGRPAVERRQRQKDSDCTLL
SIO_010081: MINDY1
subclass of: SO_0000673
so part of: MINDY1
location: join(349739..350242,350521..350578,350964..351028,351255..351413,351734..351836,351919..352061,352205..352384,352516..352662,352832..352909)
location: region:349739-352909:1
so has part: feature:349739-350242:1:exon
so has part: feature:350521-350578:1:exon
so has part: feature:350964-351028:1:exon
so has part: feature:351255-351413:1:exon
so has part: feature:351734-351836:1:exon
so has part: feature:351919-352061:1:exon
so has part: feature:352205-352384:1:exon
so has part: feature:352516-352662:1:exon
so has part: feature:352832-352909:1:exon

XP_035202464.1
type: Protein
SIO_000068: ncbiprotein

position:349739:1
position: 349739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352909:1
position: 352909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349739-350242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350521-350578:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350964-351028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351255-351413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351734-351836:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351919-352061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352205-352384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352516-352662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352832-352909:1:exon

CERS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CERS2
product: ceramide synthase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035346577.1
SIO_010081: CERS2
subclass of: SO_0000673
so part of: CERS2
location: join(354401..354405,355624..355797,356491..356608,356701..356819,357026..357083,357166..357216,357482..357574,357788..357916,358000..358106,358216..358369,358683..360019)
location: region:354401-360019:1
so has part: feature:354401-354405:1:exon
so has part: feature:355624-355797:1:exon
so has part: feature:356491-356608:1:exon
so has part: feature:356701-356819:1:exon
so has part: feature:357026-357083:1:exon
so has part: feature:357166-357216:1:exon
so has part: feature:357482-357574:1:exon
so has part: feature:357788-357916:1:exon
so has part: feature:358000-358106:1:exon
so has part: feature:358216-358369:1:exon
so has part: feature:358683-360019:1:exon

position:354401:1
position: 354401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354401-354405:1:exon

position:354405:1
position: 354405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:355624-355797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356491-356608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356701-356819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357026-357083:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357166-357216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357482-357574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357788-357916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:358000-358106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358216-358369:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358683-360019:1:exon

CERS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CERS2
product: ceramide synthase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_035346576.1
SIO_010081: CERS2
subclass of: SO_0000673
so part of: CERS2
location: join(354879..355030,355624..355797,356491..356608,356701..356819,357026..357083,357166..357216,357482..357574,357788..357916,358000..358106,358216..358369,358683..360019)
location: region:354879-360019:1
so has part: feature:354879-355030:1:exon
so has part: feature:355624-355797:1:exon
so has part: feature:356491-356608:1:exon
so has part: feature:356701-356819:1:exon
so has part: feature:357026-357083:1:exon
so has part: feature:357166-357216:1:exon
so has part: feature:357482-357574:1:exon
so has part: feature:357788-357916:1:exon
so has part: feature:358000-358106:1:exon
so has part: feature:358216-358369:1:exon
so has part: feature:358683-360019:1:exon

position:354879:1
position: 354879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354879-355030:1:exon

position:355030:1
position: 355030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:355624-355797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356491-356608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356701-356819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357026-357083:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357166-357216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357482-357574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357788-357916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:358000-358106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358216-358369:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358683-360019:1:exon

CERS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CERS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 2 isoform X2
translation: MFQTLYSYFWWERLWLPANLTWADLEDRDGRVYAKASDLYITIPLAFLFLIVRHLFETYVATPLAGLLNVKEKIRLKATPNAVLEKFYAATTKHPKQADVEMLSKKSGCTVRQVERWFRRRRNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDLREVWKGYPIQSMLPSQYWYYMIELSFYWSLLFSIASDVKRKDFKEQIIHHVATIILISFSWFANYIRAGTLIMALHDSSDYLLESAKMFNYAGWRNTCNNIFIVFAAVFIVTRLVILPFWIMHCTVVYPLDLYPAFFGYYFFNFMMAVLQSLHIFWAYLIIRMAQKFITGKVVEDERSDREETDNSEEEDEVAKNGPLSNGHPVLNNNHRKND
SIO_010081: CERS2
subclass of: SO_0000673
so part of: CERS2
location: join(355625..355797,356491..356608,356701..356819,357026..357083,357166..357216,357482..357574,357788..357916,358000..358106,358216..358369,358683..358811)
location: region:355625-358811:1
so has part: feature:355625-355797:1:exon
so has part: feature:356491-356608:1:exon
so has part: feature:356701-356819:1:exon
so has part: feature:357026-357083:1:exon
so has part: feature:357166-357216:1:exon
so has part: feature:357482-357574:1:exon
so has part: feature:357788-357916:1:exon
so has part: feature:358000-358106:1:exon
so has part: feature:358216-358369:1:exon
so has part: feature:358683-358811:1:exon

XP_035202467.1
type: Protein
SIO_000068: ncbiprotein

position:355625:1
position: 355625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355625-355797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356491-356608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356701-356819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357026-357083:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357166-357216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357482-357574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357788-357916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:358000-358106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:358216-358369:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358683-358811:1:exon

CERS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CERS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 2 isoform X2
translation: MFQTLYSYFWWERLWLPANLTWADLEDRDGRVYAKASDLYITIPLAFLFLIVRHLFETYVATPLAGLLNVKEKIRLKATPNAVLEKFYAATTKHPKQADVEMLSKKSGCTVRQVERWFRRRRNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDLREVWKGYPIQSMLPSQYWYYMIELSFYWSLLFSIASDVKRKDFKEQIIHHVATIILISFSWFANYIRAGTLIMALHDSSDYLLESAKMFNYAGWRNTCNNIFIVFAAVFIVTRLVILPFWIMHCTVVYPLDLYPAFFGYYFFNFMMAVLQSLHIFWAYLIIRMAQKFITGKVVEDERSDREETDNSEEEDEVAKNGPLSNGHPVLNNNHRKND
SIO_010081: CERS2
subclass of: SO_0000673
so part of: CERS2
location: join(355625..355797,356491..356608,356701..356819,357026..357083,357166..357216,357482..357574,357788..357916,358000..358106,358216..358369,358683..358811)
location: region:355625-358811:1
so has part: feature:355625-355797:1:exon
so has part: feature:356491-356608:1:exon
so has part: feature:356701-356819:1:exon
so has part: feature:357026-357083:1:exon
so has part: feature:357166-357216:1:exon
so has part: feature:357482-357574:1:exon
so has part: feature:357788-357916:1:exon
so has part: feature:358000-358106:1:exon
so has part: feature:358216-358369:1:exon
so has part: feature:358683-358811:1:exon

XP_035202468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355625-355797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356491-356608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356701-356819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357026-357083:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357166-357216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357482-357574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357788-357916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:358000-358106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:358216-358369:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358683-358811:1:exon

SETDB1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(361293..381675)
location: region:361293-381675:-1
so has part: feature:361293-381675:-1:exon
subclass of: SO_0000010

118178279
type: Gene
SIO_000068: ncbigene

position:361293:-1
position: 361293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381675:-1
position: 381675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361293-381675:-1:exon

SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035346668.1
SIO_010081: SETDB1
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SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_035346672.1
SIO_010081: SETDB1
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SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035346671.1
SIO_010081: SETDB1
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SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035346669.1
SIO_010081: SETDB1
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SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035346670.1
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(361293..362153,362778..362866,363652..363863,364361..364523,365208..365340,365621..365649,366265..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378989,379704..379827))
location: region:361293-379827:-1
so has part: feature:379704-379827:-1:exon
so has part: feature:378765-378989:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366265-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365208-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:361293-362153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379704-379827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378765-378989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:366265-366890:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:365208-365340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:361293-362153:-1:exon

SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035346667.1
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(361293..362153,362778..362866,363652..363863,364361..364523,365166..365340,365621..365649,366265..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378989,379704..379827))
location: region:361293-379827:-1
so has part: feature:379704-379827:-1:exon
so has part: feature:378765-378989:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366265-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365166-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:361293-362153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379704-379827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378765-378989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:366265-366890:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:365166-365340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:361293-362153:-1:exon

SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_035346676.1
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(361293..362153,362778..362866,363652..363863,364361..364523,365208..365340,365621..365649,366274..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..379027))
location: region:361293-379027:-1
so has part: feature:378765-379027:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366274-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365208-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:361293-362153:-1:exon

position:379027:-1
position: 379027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378765-379027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366274-366890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365208-365340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:361293-362153:-1:exon

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X5
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSFSPQPAEMECSDSQLAQARKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGASQQHRFSSGQAGAGTAQTFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKEEEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEMAVAASCKLPVSEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEAKACKTDLPVEREKASASALGDMDGESKALKKDVRKEPEDSSKFPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPLQPTTEVSADPSSFRHGLQGDVLTLSSSTDSEGENGQTAAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTNMAVADKGESVPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(362036..362153,362778..362866,363652..363863,364361..364523,365166..365340,365621..365649,366265..366890,367794..367963,368309..368425,368987..369087,369205..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:362036-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:369205-369589:-1:exon
so has part: feature:368987-369087:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366265-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365166-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:362036-362153:-1:exon

XP_035202563.1
type: Protein
SIO_000068: ncbiprotein

position:362036:-1
position: 362036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378976:-1
position: 378976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:369205-369589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368987-369087:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:366265-366890:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:365166-365340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:362036-362153:-1:exon

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X4
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSFSPQPAEMECSDSQLAQARKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGASQQHRFSSGQAGAGTAQTFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKEEEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEMAVAASCKLPVSEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEAKACKTDLPVEREKASASALGDMDGESKALKKDEPEDSSKFPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPLQPTTEDVLTLSSSTDSEGENGQTAAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTNMAVADKGESVPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(362036..362153,362778..362866,363652..363863,364361..364523,365208..365340,365621..365649,366274..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:362036-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366274-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365208-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:362036-362153:-1:exon

XP_035202562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366274-366890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365208-365340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362036-362153:-1:exon

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X4
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSFSPQPAEMECSDSQLAQARKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGASQQHRFSSGQAGAGTAQTFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKEEEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEMAVAASCKLPVSEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEAKACKTDLPVEREKASASALGDMDGESKALKKDEPEDSSKFPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPLQPTTEDVLTLSSSTDSEGENGQTAAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTNMAVADKGESVPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(362036..362153,362778..362866,363652..363863,364361..364523,365208..365340,365621..365649,366274..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:362036-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366274-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365208-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:362036-362153:-1:exon

XP_035202567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366274-366890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365208-365340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362036-362153:-1:exon

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X2
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSFSPQPAEMECSDSQLAQARKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGASQQHRFSSGQAGAGTAQTFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKEEEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEMAVAASCKLPVSEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEAKACKTDLPVEREKASASALGDMDGESKALKKDEPEDSSKFPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPLQPTTEVSADPSSFRHGLQGDVLTLSSSTDSEGENGQTAAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTNMAVADKGESVPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(362036..362153,362778..362866,363652..363863,364361..364523,365166..365340,365621..365649,366274..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:362036-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366274-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365166-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:362036-362153:-1:exon

XP_035202560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366274-366890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365166-365340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362036-362153:-1:exon

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X3
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSFSPQPAEMECSDSQLAQARKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGASQQHRFSSGQAGAGTAQTFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKEEEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEMAVAASCKLPVSEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEAKACKTDLPVEREKASASALGDMDGESKALKKDVRKEPEDSSKFPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPLQPTTEDVLTLSSSTDSEGENGQTAAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTNMAVADKGESVPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(362036..362153,362778..362866,363652..363863,364361..364523,365208..365340,365621..365649,366265..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:362036-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366265-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365208-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:362036-362153:-1:exon

XP_035202561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366265-366890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365208-365340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362036-362153:-1:exon

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X1
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSFSPQPAEMECSDSQLAQARKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGASQQHRFSSGQAGAGTAQTFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKEEEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEMAVAASCKLPVSEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEAKACKTDLPVEREKASASALGDMDGESKALKKDVRKEPEDSSKFPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPLQPTTEVSADPSSFRHGLQGDVLTLSSSTDSEGENGQTAAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTNMAVADKGESVPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(362036..362153,362778..362866,363652..363863,364361..364523,365166..365340,365621..365649,366265..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:362036-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366265-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365166-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:362036-362153:-1:exon

XP_035202558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366265-366890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365166-365340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362036-362153:-1:exon

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X1
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSFSPQPAEMECSDSQLAQARKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGASQQHRFSSGQAGAGTAQTFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKEEEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEMAVAASCKLPVSEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEAKACKTDLPVEREKASASALGDMDGESKALKKDVRKEPEDSSKFPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSVPLQPTTEVSADPSSFRHGLQGDVLTLSSSTDSEGENGQTAAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTNMAVADKGESVPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(362036..362153,362778..362866,363652..363863,364361..364523,365166..365340,365621..365649,366265..366890,367794..367963,368309..368425,368987..369589,370299..370457,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:362036-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:370299-370457:-1:exon
so has part: feature:368987-369589:-1:exon
so has part: feature:368309-368425:-1:exon
so has part: feature:367794-367963:-1:exon
so has part: feature:366265-366890:-1:exon
so has part: feature:365621-365649:-1:exon
so has part: feature:365166-365340:-1:exon
so has part: feature:364361-364523:-1:exon
so has part: feature:363652-363863:-1:exon
so has part: feature:362778-362866:-1:exon
so has part: feature:362036-362153:-1:exon

XP_035202559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370299-370457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:368987-369589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368309-368425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367794-367963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366265-366890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365621-365649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:365166-365340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:364361-364523:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:363652-363863:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:362778-362866:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:362036-362153:-1:exon

SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_035346674.1
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(371405..372612,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378989,379704..379828))
location: region:371405-379828:-1
so has part: feature:379704-379828:-1:exon
so has part: feature:378765-378989:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:371405-372612:-1:exon

position:371405:-1
position: 371405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379828:-1
position: 379828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379704-379828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378765-378989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371405-372612:-1:exon

position:372612:-1
position: 372612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X6
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSFSPQPAEMEHWSPAALHSSTWTDLLTDLNDLQGTQNSGSVVGLGGREPNQIKLSYGQVTHMPPPTRGPSGMFSEVRVCAEGGLDEGGTQPCDEGSVFENTRVPEHVLWDFNNFVGERDAVPVHFCHQCGFPIRIYGRLAPCQHVFCYDCALLHGQKGERRCPNCKEPVQQVKFYSPDAF
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(372099..372612,372973..373111,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:372099-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:372973-373111:-1:exon
so has part: feature:372099-372612:-1:exon

XP_035202565.1
type: Protein
SIO_000068: ncbiprotein

position:372099:-1
position: 372099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372973-373111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:372099-372612:-1:exon

SETDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SETDB1
product: SET domain bifurcated histone lysine methyltransferase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_035346675.1
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(373125..373379,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378989,379704..379827))
location: region:373125-379827:-1
so has part: feature:379704-379827:-1:exon
so has part: feature:378765-378989:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:373125-373379:-1:exon

position:373125:-1
position: 373125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379704-379827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378765-378989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:373125-373379:-1:exon

position:373379:-1
position: 373379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SETDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SETDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETDB1 isoform X7
translation: MDSQEIKELQQEVMEELGISMEELQDIIDEELEKFECVKQRKQQLEELEKCVKQKEEEVAHVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKPTEVIEIPDEDDDDVMSIDLGWKNSDTNPKIVKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDALKDAQTPQQTPAALQSVGPAAAGSDLSNDGDLNIGMRILGKKRTKTWHKGTLIAIQSVGAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKDRFLIFFDDGYASYVKEWELYPICRPLRKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVVELLESETYKGLYLLA
SIO_010081: SETDB1
subclass of: SO_0000673
so part of: SETDB1
location: complement(join(373330..373379,373463..373592,374500..374690,375043..375116,376371..376572,376864..377031,377456..377555,377691..377728,378248..378420,378765..378976))
location: region:373330-378976:-1
so has part: feature:378765-378976:-1:exon
so has part: feature:378248-378420:-1:exon
so has part: feature:377691-377728:-1:exon
so has part: feature:377456-377555:-1:exon
so has part: feature:376864-377031:-1:exon
so has part: feature:376371-376572:-1:exon
so has part: feature:375043-375116:-1:exon
so has part: feature:374500-374690:-1:exon
so has part: feature:373463-373592:-1:exon
so has part: feature:373330-373379:-1:exon

XP_035202566.1
type: Protein
SIO_000068: ncbiprotein

position:373330:-1
position: 373330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378765-378976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378248-378420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377691-377728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377456-377555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376864-377031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376371-376572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375043-375116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374500-374690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373463-373592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373330-373379:-1:exon

LOC118178280
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118178280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 380624..381594
location: region:380624-381594:1
so has part: feature:380624-381594:1:exon
subclass of: SO_0000011

118178280
type: Gene
SIO_000068: ncbigene

position:380624:1
position: 380624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381594:1
position: 381594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380624-381594:1:exon

LOC118178280
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118178280
product: uncharacterized LOC118178280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004756113.1
SIO_010081: LOC118178280
subclass of: SO_0000673
so part of: LOC118178280
location: join(380624..380769,380889..381326,381478..381594)
location: region:380624-381594:1
so has part: feature:380624-380769:1:exon
so has part: feature:380889-381326:1:exon
so has part: feature:381478-381594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380624-380769:1:exon

position:380769:1
position: 380769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380889-381326:1:exon

position:380889:1
position: 380889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381326:1
position: 381326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:381478-381594:1:exon

position:381478:1
position: 381478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARNT
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 382346..410565
location: region:382346-410565:1
so has part: feature:382346-410565:1:exon
subclass of: SO_0000010

118178234
type: Gene
SIO_000068: ncbigene

position:382346:1
position: 382346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410565:1
position: 410565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382346-410565:1:exon

ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035346582.1
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382346..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398706..398771,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..410565)
location: region:382346-410565:1
so has part: feature:382346-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398706-398771:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:404766-404876:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-410565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382346-382491:1:exon

position:382491:1
position: 382491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

position:390185:1
position: 390185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390296:1
position: 390296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

position:391559:1
position: 391559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391603:1
position: 391603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

position:392787:1
position: 392787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392831:1
position: 392831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:395526-395570:1:exon

position:395526:1
position: 395526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395570:1
position: 395570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:398034-398247:1:exon

position:398034:1
position: 398034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398247:1
position: 398247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:398405-398618:1:exon

position:398405:1
position: 398405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398618:1
position: 398618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:398706-398771:1:exon

position:398706:1
position: 398706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398771:1
position: 398771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:398883-398982:1:exon

position:398883:1
position: 398883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398982:1
position: 398982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:399398-399463:1:exon

position:399398:1
position: 399398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399463:1
position: 399463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:400570-400655:1:exon

position:400570:1
position: 400570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400655:1
position: 400655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:401098-401174:1:exon

position:401098:1
position: 401098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401174:1
position: 401174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:401348-401482:1:exon

position:401348:1
position: 401348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401482:1
position: 401482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:401957-402031:1:exon

position:401957:1
position: 401957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402031:1
position: 402031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:402838-402989:1:exon

position:402838:1
position: 402838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402989:1
position: 402989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:404766-404876:1:exon

position:404766:1
position: 404766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404876:1
position: 404876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:405082-405160:1:exon

position:405082:1
position: 405082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405160:1
position: 405160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:405532-405655:1:exon

position:405532:1
position: 405532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405655:1
position: 405655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:406243-406342:1:exon

position:406243:1
position: 406243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406342:1
position: 406342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:407003-407153:1:exon

position:407003:1
position: 407003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407153:1
position: 407153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:407428-407587:1:exon

position:407428:1
position: 407428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407587:1
position: 407587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:408068-408219:1:exon

position:408068:1
position: 408068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408219:1
position: 408219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:408821-410565:1:exon

position:408821:1
position: 408821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035346585.1
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382346..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398706..398771,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407102,407428..407587,408068..408219,408821..410565)
location: region:382346-410565:1
so has part: feature:382346-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398706-398771:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:404766-404876:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407102:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-410565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382346-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395526-395570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398706-398771:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:404766-404876:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407003-407102:1:exon

position:407102:1
position: 407102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408821-410565:1:exon

ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035346588.1
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382346..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398706..398771,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..410565)
location: region:382346-410565:1
so has part: feature:382346-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398706-398771:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-410565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382346-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395526-395570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398706-398771:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408821-410565:1:exon

ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035346586.1
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382346..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..410565)
location: region:382346-410565:1
so has part: feature:382346-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
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ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_035346589.1
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
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location: region:382346-410565:1
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ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035346584.1
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
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location: region:382346-410565:1
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ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035346587.1
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
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location: region:382346-410565:1
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urn:…
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ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_035346590.1
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
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ARNT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARNT
product: aryl hydrocarbon receptor nuclear translocator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_035346583.1
SIO_010081: ARNT
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position:382380:1
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SIO_000300: 8
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398706-398771:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:404766-404876:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408821-410565:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X1
translation: MAATAANPEMASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTEGTKPWCLSNKDPAAPPENASKGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQESRPALSNSMQRPQLGQSVSLPLEMGTAQLPSRQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQVSGTNWAPGTRPPFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382467..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398706..398771,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..408910)
location: region:382467-408910:1
so has part: feature:382467-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398706-398771:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:404766-404876:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202473.1
type: Protein
SIO_000068: ncbiprotein

position:382467:1
position: 382467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408910:1
position: 408910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382467-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395526-395570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398706-398771:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:404766-404876:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408821-408910:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X4
translation: MAATAANPEMASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTEGTKPWCLSNKDPAAPPENASKGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQESRPALSNSMQRPQLGQSVSLPLEMGTAQLPSRQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382467..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398706..398771,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407102,407428..407587,408068..408219,408821..408910)
location: region:382467-408910:1
so has part: feature:382467-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398706-398771:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:404766-404876:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407102:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382467-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395526-395570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398706-398771:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:404766-404876:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407003-407102:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408821-408910:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X7
translation: MAATAANPEMASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTEGTKPWCLSNKDPAAPPENASKGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQVSGTNWAPGTRPPFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382467..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398706..398771,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..408910)
location: region:382467-408910:1
so has part: feature:382467-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398706-398771:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382467-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395526-395570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398706-398771:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408821-408910:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X5
translation: MAATAANPEMASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQESRPALSNSMQRPQLGQSVSLPLEMGTAQLPSRQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQVSGTNWAPGTRPPFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382467..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..408910)
location: region:382467-408910:1
so has part: feature:382467-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:404766-404876:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382467-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395526-395570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:404766-404876:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408821-408910:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X8
translation: MAATAANPEMASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQVSGTNWAPGTRPPFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382467..382491,390185..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..408910)
location: region:382467-408910:1
so has part: feature:382467-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382467-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395526-395570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:408821-408910:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X3
translation: MAATAANPEMASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTEGTKPWCLSNKDPAAPPENASKGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQESRPALSNSMQRPQLGQSVSLPLEMGTAQLPSRQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQVSGTNWAPGTRPPFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382467..382491,390185..390296,391559..391603,392787..392831,398034..398247,398405..398618,398706..398771,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..408910)
location: region:382467-408910:1
so has part: feature:382467-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398706-398771:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:404766-404876:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382467-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398706-398771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:404766-404876:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408821-408910:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X6
translation: MAATAANPEMASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQESRPALSNSMQRPQLGQSVSLPLEMGTAQLPSRQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQVSGTNWAPGTRPPFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382467..382491,390185..390296,391559..391603,392787..392831,398034..398247,398405..398618,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..408910)
location: region:382467-408910:1
so has part: feature:382467-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:404766-404876:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382467-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:404766-404876:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:408821-408910:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X9
translation: MAATAANPEMASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQVSGTNWAPGTRPPFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(382467..382491,390185..390296,391559..391603,392787..392831,398034..398247,398405..398618,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..408910)
location: region:382467-408910:1
so has part: feature:382467-382491:1:exon
so has part: feature:390185-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382467-382491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390185-390296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:408821-408910:1:exon

ARNT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARNT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator isoform X2
translation: MASDVSSLNAAVGSGTPGPGAQAGGAIVQRANKRRPGLDFDDDGEGNSKFLRCDDDPMPNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTEGTKPWCLSNKDPAAPPENASKGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRCGNSSVDPVSVNRLSFMRNRCRNGLGAAKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFCLVAIGRLQVTSSPNCTDMNNVCQPTEFISRHNTEGIFTFIDHRCVATVGYQPQELLGKDIVDFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQESRPALSNSMQRPQLGQSVSLPLEMGTAQLPSRQQQPPQQTELEVVPGRESLSGYDHSQVPVQPVTAAGPEHSKPLEKAESLFNQERDPRFSEIYSSINTDQNKAIPASTVPANQPIFPQGNTFTPSRPAENFRSSSMVPPVNIIQQQPSSAGRILAQISRHSNPAQVSGTNWAPGTRPPFTPQQVASQTVKTRPPSFSMGTFQGTPSSFSPMTAPGSTASPSGTAYPNLAGRGTGFTTEAAQTPTPFQTRATEGVGMWPQWQGQHHGTPSGEQHVQQPQPSQPEVFSDMLTMLGDQGPNYNNEEFPELNIFPSFSE
SIO_010081: ARNT
subclass of: SO_0000673
so part of: ARNT
location: join(390187..390296,391559..391603,392787..392831,395526..395570,398034..398247,398405..398618,398706..398771,398883..398982,399398..399463,400570..400655,401098..401174,401348..401482,401957..402031,402838..402989,404766..404876,405082..405160,405532..405655,406243..406342,407003..407153,407428..407587,408068..408219,408821..408910)
location: region:390187-408910:1
so has part: feature:390187-390296:1:exon
so has part: feature:391559-391603:1:exon
so has part: feature:392787-392831:1:exon
so has part: feature:395526-395570:1:exon
so has part: feature:398034-398247:1:exon
so has part: feature:398405-398618:1:exon
so has part: feature:398706-398771:1:exon
so has part: feature:398883-398982:1:exon
so has part: feature:399398-399463:1:exon
so has part: feature:400570-400655:1:exon
so has part: feature:401098-401174:1:exon
so has part: feature:401348-401482:1:exon
so has part: feature:401957-402031:1:exon
so has part: feature:402838-402989:1:exon
so has part: feature:404766-404876:1:exon
so has part: feature:405082-405160:1:exon
so has part: feature:405532-405655:1:exon
so has part: feature:406243-406342:1:exon
so has part: feature:407003-407153:1:exon
so has part: feature:407428-407587:1:exon
so has part: feature:408068-408219:1:exon
so has part: feature:408821-408910:1:exon

XP_035202474.1
type: Protein
SIO_000068: ncbiprotein

position:390187:1
position: 390187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390187-390296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391559-391603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392787-392831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395526-395570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398034-398247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398405-398618:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398706-398771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398883-398982:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399398-399463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:400570-400655:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:401098-401174:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401348-401482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401957-402031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402838-402989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:404766-404876:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:405082-405160:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405532-405655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:406243-406342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:407003-407153:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407428-407587:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:408068-408219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408821-408910:1:exon

CTSK
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CTSK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 412478..416305
location: region:412478-416305:1
so has part: feature:412478-416305:1:exon
subclass of: SO_0000010

118178236
type: Gene
SIO_000068: ncbigene

position:412478:1
position: 412478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416305:1
position: 416305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412478-416305:1:exon

CTSK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CTSK
product: cathepsin K
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_035346591.1
SIO_010081: CTSK
subclass of: SO_0000673
so part of: CTSK
location: join(412478..413345,414115..414241,414463..414585,414700..414855,414955..415173,415267..415432,415546..415651,415731..416305)
location: region:412478-416305:1
so has part: feature:412478-413345:1:exon
so has part: feature:414115-414241:1:exon
so has part: feature:414463-414585:1:exon
so has part: feature:414700-414855:1:exon
so has part: feature:414955-415173:1:exon
so has part: feature:415267-415432:1:exon
so has part: feature:415546-415651:1:exon
so has part: feature:415731-416305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412478-413345:1:exon

position:413345:1
position: 413345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414115-414241:1:exon

position:414115:1
position: 414115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414241:1
position: 414241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414463-414585:1:exon

position:414463:1
position: 414463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414585:1
position: 414585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:414700-414855:1:exon

position:414700:1
position: 414700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414855:1
position: 414855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:414955-415173:1:exon

position:414955:1
position: 414955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415173:1
position: 415173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:415267-415432:1:exon

position:415267:1
position: 415267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415432:1
position: 415432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:415546-415651:1:exon

position:415546:1
position: 415546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415651:1
position: 415651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:415731-416305:1:exon

position:415731:1
position: 415731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTSK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CTSK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin K
translation: MRQLHPQSRLQHAPTNSRMLGMWWPTLLVLFVPVVVAQLHPERALDIQWDLWKKTYRKQYNGEADEVARRLIWEKNLKYINTHNLEHTLGVHTFELAMNHLGDMTSEEVVRTMTGLKVPRSRPHRNETLYIPDWTDRAPAAVDWRRKGYVTPVKNQGQCGSCWAFSSVGALEGQLKRKTGKLLSLSPQNLVDCVANNNGCGGGYMTNAFEYVRQNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEGNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDESCNAENINHAVLAVGYGTQKGTKHWIIKNSWGEEWGNKGYVLLARNMNNACGIANLASFPKM
SIO_010081: CTSK
subclass of: SO_0000673
so part of: CTSK
location: join(413284..413345,414115..414241,414463..414585,414700..414855,414955..415173,415267..415432,415546..415651,415731..415830)
location: region:413284-415830:1
so has part: feature:413284-413345:1:exon
so has part: feature:414115-414241:1:exon
so has part: feature:414463-414585:1:exon
so has part: feature:414700-414855:1:exon
so has part: feature:414955-415173:1:exon
so has part: feature:415267-415432:1:exon
so has part: feature:415546-415651:1:exon
so has part: feature:415731-415830:1:exon

XP_035202482.1
type: Protein
SIO_000068: ncbiprotein

position:413284:1
position: 413284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415830:1
position: 415830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413284-413345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414115-414241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414463-414585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414700-414855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:414955-415173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415267-415432:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415546-415651:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415731-415830:1:exon

CTSS
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CTSS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 419159..423989
location: region:419159-423989:1
so has part: feature:419159-423989:1:exon
subclass of: SO_0000010

118178283
type: Gene
SIO_000068: ncbigene

position:419159:1
position: 419159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423989:1
position: 423989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419159-423989:1:exon

CTSS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CTSS
product: cathepsin S, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_035346681.1
SIO_010081: CTSS
subclass of: SO_0000673
so part of: CTSS
location: join(419159..419354,419565..419580,419902..420117,420261..420383,420926..421075,421152..421376,422557..422722,422997..423099,423655..423989)
location: region:419159-423989:1
so has part: feature:419159-419354:1:exon
so has part: feature:419565-419580:1:exon
so has part: feature:419902-420117:1:exon
so has part: feature:420261-420383:1:exon
so has part: feature:420926-421075:1:exon
so has part: feature:421152-421376:1:exon
so has part: feature:422557-422722:1:exon
so has part: feature:422997-423099:1:exon
so has part: feature:423655-423989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:419159-419354:1:exon

position:419354:1
position: 419354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419565-419580:1:exon

position:419565:1
position: 419565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419580:1
position: 419580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419902-420117:1:exon

position:419902:1
position: 419902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420117:1
position: 420117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420261-420383:1:exon

position:420261:1
position: 420261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420383:1
position: 420383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420926-421075:1:exon

position:420926:1
position: 420926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421075:1
position: 421075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:421152-421376:1:exon

position:421152:1
position: 421152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421376:1
position: 421376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:422557-422722:1:exon

position:422557:1
position: 422557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422722:1
position: 422722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:422997-423099:1:exon

position:422997:1
position: 422997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423099:1
position: 423099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:423655-423989:1:exon

position:423655:1
position: 423655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTSS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CTSS
product: cathepsin S, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_035346680.1
SIO_010081: CTSS
subclass of: SO_0000673
so part of: CTSS
location: join(419161..419354,419902..420117,420261..420383,420926..421075,421152..421376,422557..422722,422997..423099,423655..423989)
location: region:419161-423989:1
so has part: feature:419161-419354:1:exon
so has part: feature:419902-420117:1:exon
so has part: feature:420261-420383:1:exon
so has part: feature:420926-421075:1:exon
so has part: feature:421152-421376:1:exon
so has part: feature:422557-422722:1:exon
so has part: feature:422997-423099:1:exon
so has part: feature:423655-423989:1:exon

position:419161:1
position: 419161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419161-419354:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419902-420117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420261-420383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420926-421075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:421152-421376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422557-422722:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422997-423099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:423655-423989:1:exon

CTSS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CTSS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin S
translation: MELLVCVAFLAVLAAALGQPDPTLDWHWQLWKKAHGKEYRHQKEEGERRMTWERNLRLVTLHNLEHSLGLHSYQLGMNHLADMTSEEVSALLTGLKVLHRHNRTSTYQPQPGGSIPDTVDWREKGCVTEVKNQGACGSCWAFSAVGALEAQVKLKTGKLVSLSVQNLVDCSMMYGNKGCSGGFMTSAFQYIIDNNGIDSDESYPYMAQNGTCQYNVSTRAATCSKYVELPYADEAALKDAVANIGPVSVAIDATQPTFFLYKSGVYDDPRCTQEVNHGVLVIGYGTLNDKDYWLVKNSWGVHFGDNGYIRMSRNHANHCGIASYASYPQI
SIO_010081: CTSS
subclass of: SO_0000673
so part of: CTSS
location: join(419992..420117,420261..420383,420926..421075,421152..421376,422557..422722,422997..423099,423655..423754)
location: region:419992-423754:1
so has part: feature:419992-420117:1:exon
so has part: feature:420261-420383:1:exon
so has part: feature:420926-421075:1:exon
so has part: feature:421152-421376:1:exon
so has part: feature:422557-422722:1:exon
so has part: feature:422997-423099:1:exon
so has part: feature:423655-423754:1:exon

XP_035202571.1
type: Protein
SIO_000068: ncbiprotein

position:419992:1
position: 419992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423754:1
position: 423754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419992-420117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420261-420383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420926-421075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421152-421376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422557-422722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422997-423099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:423655-423754:1:exon

CTSS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CTSS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cathepsin S
translation: MELLVCVAFLAVLAAALGQPDPTLDWHWQLWKKAHGKEYRHQKEEGERRMTWERNLRLVTLHNLEHSLGLHSYQLGMNHLADMTSEEVSALLTGLKVLHRHNRTSTYQPQPGGSIPDTVDWREKGCVTEVKNQGACGSCWAFSAVGALEAQVKLKTGKLVSLSVQNLVDCSMMYGNKGCSGGFMTSAFQYIIDNNGIDSDESYPYMAQNGTCQYNVSTRAATCSKYVELPYADEAALKDAVANIGPVSVAIDATQPTFFLYKSGVYDDPRCTQEVNHGVLVIGYGTLNDKDYWLVKNSWGVHFGDNGYIRMSRNHANHCGIASYASYPQI
SIO_010081: CTSS
subclass of: SO_0000673
so part of: CTSS
location: join(419992..420117,420261..420383,420926..421075,421152..421376,422557..422722,422997..423099,423655..423754)
location: region:419992-423754:1
so has part: feature:419992-420117:1:exon
so has part: feature:420261-420383:1:exon
so has part: feature:420926-421075:1:exon
so has part: feature:421152-421376:1:exon
so has part: feature:422557-422722:1:exon
so has part: feature:422997-423099:1:exon
so has part: feature:423655-423754:1:exon

XP_035202572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419992-420117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420261-420383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420926-421075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421152-421376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422557-422722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422997-423099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:423655-423754:1:exon

SSR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(426833..430239)
location: region:426833-430239:-1
so has part: feature:426833-430239:-1:exon
subclass of: SO_0000010

118178284
type: Gene
SIO_000068: ncbigene

position:426833:-1
position: 426833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430239:-1
position: 430239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426833-430239:-1:exon

SSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SSR2
product: signal sequence receptor subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035346682.1
SIO_010081: SSR2
subclass of: SO_0000673
so part of: SSR2
location: complement(join(426833..427157,427466..427543,427717..427825,428186..428284,428845..428999,430140..430239))
location: region:426833-430239:-1
so has part: feature:430140-430239:-1:exon
so has part: feature:428845-428999:-1:exon
so has part: feature:428186-428284:-1:exon
so has part: feature:427717-427825:-1:exon
so has part: feature:427466-427543:-1:exon
so has part: feature:426833-427157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430140-430239:-1:exon

position:430140:-1
position: 430140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428845-428999:-1:exon

position:428845:-1
position: 428845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428999:-1
position: 428999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428186-428284:-1:exon

position:428186:-1
position: 428186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428284:-1
position: 428284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:427717-427825:-1:exon

position:427717:-1
position: 427717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427825:-1
position: 427825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427466-427543:-1:exon

position:427466:-1
position: 427466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427543:-1
position: 427543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:426833-427157:-1:exon

position:427157:-1
position: 427157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MKLLILAVFALFYVAHCEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGGQVVVGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN
SIO_010081: SSR2
subclass of: SO_0000673
so part of: SSR2
location: complement(join(427047..427157,427466..427543,427717..427825,428186..428284,428845..428999))
location: region:427047-428999:-1
so has part: feature:428845-428999:-1:exon
so has part: feature:428186-428284:-1:exon
so has part: feature:427717-427825:-1:exon
so has part: feature:427466-427543:-1:exon
so has part: feature:427047-427157:-1:exon

XP_035202573.1
type: Protein
SIO_000068: ncbiprotein

position:427047:-1
position: 427047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428845-428999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428186-428284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427717-427825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427466-427543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427047-427157:-1:exon

CCT3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 432982..440292
location: region:432982-440292:1
so has part: feature:432982-440292:1:exon
subclass of: SO_0000010

118178291
type: Gene
SIO_000068: ncbigene

position:432982:1
position: 432982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440292:1
position: 440292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432982-440292:1:exon

CCT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CCT3
product: chaperonin containing TCP1 subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035346693.1
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(432982..433136,433876..433937,434359..434409,434505..434567,435153..435249,435647..435764,435937..436123,436618..436767,437230..437362,437784..437865,437993..438173,438380..438625,439183..439314,439899..440292)
location: region:432982-440292:1
so has part: feature:432982-433136:1:exon
so has part: feature:433876-433937:1:exon
so has part: feature:434359-434409:1:exon
so has part: feature:434505-434567:1:exon
so has part: feature:435153-435249:1:exon
so has part: feature:435647-435764:1:exon
so has part: feature:435937-436123:1:exon
so has part: feature:436618-436767:1:exon
so has part: feature:437230-437362:1:exon
so has part: feature:437784-437865:1:exon
so has part: feature:437993-438173:1:exon
so has part: feature:438380-438625:1:exon
so has part: feature:439183-439314:1:exon
so has part: feature:439899-440292:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432982-433136:1:exon

position:433136:1
position: 433136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433876-433937:1:exon

position:433876:1
position: 433876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433937:1
position: 433937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434359-434409:1:exon

position:434359:1
position: 434359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434409:1
position: 434409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434505-434567:1:exon

position:434505:1
position: 434505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434567:1
position: 434567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:435153-435249:1:exon

position:435153:1
position: 435153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435249:1
position: 435249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435647-435764:1:exon

position:435647:1
position: 435647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435764:1
position: 435764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:435937-436123:1:exon

position:435937:1
position: 435937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436123:1
position: 436123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:436618-436767:1:exon

position:436618:1
position: 436618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436767:1
position: 436767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:437230-437362:1:exon

position:437230:1
position: 437230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437362:1
position: 437362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:437784-437865:1:exon

position:437784:1
position: 437784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437865:1
position: 437865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:437993-438173:1:exon

position:437993:1
position: 437993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438173:1
position: 438173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:438380-438625:1:exon

position:438380:1
position: 438380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438625:1
position: 438625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:439183-439314:1:exon

position:439183:1
position: 439183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439314:1
position: 439314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:439899-440292:1:exon

position:439899:1
position: 439899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma
translation: MMGPRPVLVLSQNMKRESGRKVQTGNITAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVIIGAYRKALDDMISILKKIGTPVDVNNREMMLKIIKSAINTKAINRWSDLACTIALDAVKTVELEENGRKEIDIKKYAKVEKIPGGFSEDSCVLRGIMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEITREEDFARILQMEEEYIQQICEDLMRVKPDLVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRTDELREEDVGTGARLFEVKKIGDEYFAFITDCKDPKACTIILRGASKEILAEVERNLQDAMQVCRNVLIDPQLVPGGGATEMAVSHALTEKSKGMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRVLTSLRAKHTQEGSQTWGVNGETGALVDMKDLGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDEQSKQPTATEAAQE
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(433106..433136,433876..433937,434359..434409,434505..434567,435153..435249,435647..435764,435937..436123,436618..436767,437230..437362,437784..437865,437993..438173,438380..438625,439183..439314,439899..440003)
location: region:433106-440003:1
so has part: feature:433106-433136:1:exon
so has part: feature:433876-433937:1:exon
so has part: feature:434359-434409:1:exon
so has part: feature:434505-434567:1:exon
so has part: feature:435153-435249:1:exon
so has part: feature:435647-435764:1:exon
so has part: feature:435937-436123:1:exon
so has part: feature:436618-436767:1:exon
so has part: feature:437230-437362:1:exon
so has part: feature:437784-437865:1:exon
so has part: feature:437993-438173:1:exon
so has part: feature:438380-438625:1:exon
so has part: feature:439183-439314:1:exon
so has part: feature:439899-440003:1:exon

XP_035202584.1
type: Protein
SIO_000068: ncbiprotein

position:433106:1
position: 433106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440003:1
position: 440003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433106-433136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433876-433937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434359-434409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434505-434567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435153-435249:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435647-435764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:435937-436123:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436618-436767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437230-437362:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437784-437865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:437993-438173:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:438380-438625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:439183-439314:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:439899-440003:1:exon

GLMP
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: GLMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 440442..443778
location: region:440442-443778:1
so has part: feature:440442-443778:1:exon
subclass of: SO_0000010

118178299
type: Gene
SIO_000068: ncbigene

position:440442:1
position: 440442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443778:1
position: 443778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440442-443778:1:exon

GLMP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GLMP
product: glycosylated lysosomal membrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_035346707.1
SIO_010081: GLMP
subclass of: SO_0000673
so part of: GLMP
location: join(440442..440546,440933..441190,441499..441681,441815..442033,442138..442415,442737..443778)
location: region:440442-443778:1
so has part: feature:440442-440546:1:exon
so has part: feature:440933-441190:1:exon
so has part: feature:441499-441681:1:exon
so has part: feature:441815-442033:1:exon
so has part: feature:442138-442415:1:exon
so has part: feature:442737-443778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440442-440546:1:exon

position:440546:1
position: 440546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440933-441190:1:exon

position:440933:1
position: 440933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441190:1
position: 441190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:441499-441681:1:exon

position:441499:1
position: 441499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441681:1
position: 441681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:441815-442033:1:exon

position:441815:1
position: 441815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442033:1
position: 442033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:442138-442415:1:exon

position:442138:1
position: 442138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442415:1
position: 442415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:442737-443778:1:exon

position:442737:1
position: 442737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLMP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GLMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosylated lysosomal membrane protein
translation: MRRLLLLAGLLAAAGGREVSMQYNPGWNGSSVNLLHVRAVGPNDTLHYVWSSIGAPAALLVVTEGQSSTLHINWTQLLSPAPAGAIWIEPAGSVVYSTAVVFTKVFEYSKVNALEEVFYPTYDLADFSWDSVNRTLNHTALTAEFVGGPAADPSGSFSNGSLAFRVTAYETSGRDGTLPSLLHTANSSKVEFVLAGAAPRGNSSWFTLEVATVEEAGVVQRLRSARSIDDEYTPTIFETFSLVAESRNDSSALSFLQWKATAYGSQAPTREDSIQCRSGSLKAANWTLPRSSIVHAYFGEGVGSTYTISAVNISFGGEDGNIYEEKRYLSWSTLLGFGQPPKDTFSPLVISIMAVALGTPMVLLVVGSCVVLFAQGKRYTEYEPIN
SIO_010081: GLMP
subclass of: SO_0000673
so part of: GLMP
location: join(440493..440546,440933..441190,441499..441681,441815..442033,442138..442415,442737..442905)
location: region:440493-442905:1
so has part: feature:440493-440546:1:exon
so has part: feature:440933-441190:1:exon
so has part: feature:441499-441681:1:exon
so has part: feature:441815-442033:1:exon
so has part: feature:442138-442415:1:exon
so has part: feature:442737-442905:1:exon

XP_035202598.1
type: Protein
SIO_000068: ncbiprotein

position:440493:1
position: 440493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442905:1
position: 442905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440493-440546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440933-441190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441499-441681:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441815-442033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442138-442415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442737-442905:1:exon

TMEM79
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(445411..447656)
location: region:445411-447656:-1
so has part: feature:445411-447656:-1:exon
subclass of: SO_0000010

118178300
type: Gene
SIO_000068: ncbigene

position:445411:-1
position: 445411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447656:-1
position: 447656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445411-447656:-1:exon

TMEM79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMEM79
product: transmembrane protein 79, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_035346708.1
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(445411..445628,445870..446698,447416..447656))
location: region:445411-447656:-1
so has part: feature:447416-447656:-1:exon
so has part: feature:445870-446698:-1:exon
so has part: feature:445411-445628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447416-447656:-1:exon

position:447416:-1
position: 447416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445870-446698:-1:exon

position:445870:-1
position: 445870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446698:-1
position: 446698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445411-445628:-1:exon

position:445628:-1
position: 445628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMEM79
product: transmembrane protein 79, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_035346709.1
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(445411..445628,445870..446698,447163..447304))
location: region:445411-447304:-1
so has part: feature:447163-447304:-1:exon
so has part: feature:445870-446698:-1:exon
so has part: feature:445411-445628:-1:exon

position:447304:-1
position: 447304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447163-447304:-1:exon

position:447163:-1
position: 447163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445870-446698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445411-445628:-1:exon

TMEM79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79
translation: MAAADPILPPEEVALLELGKVAPATPLDKVPPAPNEHPGDPDATLLWDQCQHGAQGQKEPTETKRRSSPEGGHEDPEEAAPVCPPAESEDDEAHGLPVMAAHVFVPINPQCIERKKQPTPWPQEEGKGGCIPHGDRPDSLRQKQVFLPVSPLRYRDPAGFEGLVAKPSAERSSCPCIRDCSADGLKAVASVVGALFLCPCLIYGAYVFLPFDAPLLPTVSARLVYTLRCAAFATFPIVLGMIVSGISRLCSSALEPFGELQQEVEIHRTYVSQSVHLFILYFFNMAVLATYLQQEVLKLIPLLTGLFAISR
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(445411..445628,445870..446587))
location: region:445411-446587:-1
so has part: feature:445870-446587:-1:exon
so has part: feature:445411-445628:-1:exon

XP_035202599.1
type: Protein
SIO_000068: ncbiprotein

position:446587:-1
position: 446587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445870-446587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445411-445628:-1:exon

TMEM79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79
translation: MAAADPILPPEEVALLELGKVAPATPLDKVPPAPNEHPGDPDATLLWDQCQHGAQGQKEPTETKRRSSPEGGHEDPEEAAPVCPPAESEDDEAHGLPVMAAHVFVPINPQCIERKKQPTPWPQEEGKGGCIPHGDRPDSLRQKQVFLPVSPLRYRDPAGFEGLVAKPSAERSSCPCIRDCSADGLKAVASVVGALFLCPCLIYGAYVFLPFDAPLLPTVSARLVYTLRCAAFATFPIVLGMIVSGISRLCSSALEPFGELQQEVEIHRTYVSQSVHLFILYFFNMAVLATYLQQEVLKLIPLLTGLFAISR
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(445411..445628,445870..446587))
location: region:445411-446587:-1
so has part: feature:445870-446587:-1:exon
so has part: feature:445411-445628:-1:exon

XP_035202600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445870-446587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445411-445628:-1:exon

IGSF9
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: IGSF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(504097..517142)
location: region:504097-517142:-1
so has part: feature:504097-517142:-1:exon
subclass of: SO_0000010

118178148
type: Gene
SIO_000068: ncbigene

position:504097:-1
position: 504097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517142:-1
position: 517142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504097-517142:-1:exon

IGSF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: IGSF9
product: immunoglobulin superfamily member 9
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346439.1
SIO_010081: IGSF9
subclass of: SO_0000673
so part of: IGSF9
location: complement(join(504097..504461,504554..504620,504944..505165,507898..507997,508118..509205,509511..509556,509745..509915,510273..510357,510466..510716,510834..511009,511096..511219,511361..511511,511823..511939,512033..512173,512252..512394,512470..512615,512820..512961,513056..513173,513323..513474,513759..513911,516414..516599,516827..517142))
location: region:504097-517142:-1
so has part: feature:516827-517142:-1:exon
so has part: feature:516414-516599:-1:exon
so has part: feature:513759-513911:-1:exon
so has part: feature:513323-513474:-1:exon
so has part: feature:513056-513173:-1:exon
so has part: feature:512820-512961:-1:exon
so has part: feature:512470-512615:-1:exon
so has part: feature:512252-512394:-1:exon
so has part: feature:512033-512173:-1:exon
so has part: feature:511823-511939:-1:exon
so has part: feature:511361-511511:-1:exon
so has part: feature:511096-511219:-1:exon
so has part: feature:510834-511009:-1:exon
so has part: feature:510466-510716:-1:exon
so has part: feature:510273-510357:-1:exon
so has part: feature:509745-509915:-1:exon
so has part: feature:509511-509556:-1:exon
so has part: feature:508118-509205:-1:exon
so has part: feature:507898-507997:-1:exon
so has part: feature:504944-505165:-1:exon
so has part: feature:504554-504620:-1:exon
so has part: feature:504097-504461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516827-517142:-1:exon

position:516827:-1
position: 516827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516414-516599:-1:exon

position:516414:-1
position: 516414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516599:-1
position: 516599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513759-513911:-1:exon

position:513759:-1
position: 513759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513911:-1
position: 513911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:513323-513474:-1:exon

position:513323:-1
position: 513323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513474:-1
position: 513474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:513056-513173:-1:exon

position:513056:-1
position: 513056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513173:-1
position: 513173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:512820-512961:-1:exon

position:512820:-1
position: 512820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512961:-1
position: 512961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:512470-512615:-1:exon

position:512470:-1
position: 512470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512615:-1
position: 512615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:512252-512394:-1:exon

position:512252:-1
position: 512252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512394:-1
position: 512394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:512033-512173:-1:exon

position:512033:-1
position: 512033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512173:-1
position: 512173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:511823-511939:-1:exon

position:511823:-1
position: 511823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511939:-1
position: 511939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:511361-511511:-1:exon

position:511361:-1
position: 511361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511511:-1
position: 511511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:511096-511219:-1:exon

position:511096:-1
position: 511096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511219:-1
position: 511219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:510834-511009:-1:exon

position:510834:-1
position: 510834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511009:-1
position: 511009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:510466-510716:-1:exon

position:510466:-1
position: 510466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510716:-1
position: 510716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:510273-510357:-1:exon

position:510273:-1
position: 510273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510357:-1
position: 510357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:509745-509915:-1:exon

position:509745:-1
position: 509745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509915:-1
position: 509915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:509511-509556:-1:exon

position:509511:-1
position: 509511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509556:-1
position: 509556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:508118-509205:-1:exon

position:508118:-1
position: 508118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509205:-1
position: 509205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:507898-507997:-1:exon

position:507898:-1
position: 507898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507997:-1
position: 507997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:504944-505165:-1:exon

position:504944:-1
position: 504944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505165:-1
position: 505165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:504554-504620:-1:exon

position:504554:-1
position: 504554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504620:-1
position: 504620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:504097-504461:-1:exon

position:504461:-1
position: 504461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGSF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: IGSF9
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein turtle homolog A
translation: MRWWLRAAFLSLLAGTEAKGSGPSGAVVGRVGDSAVLGCDLLGARQSRPPLYVIEWVRVGFVLPIFIKFGLYSPRVDPEYLGRVRIEEGASLRIDLLRAEDQGWYECRVLFLDRPSADADFQNGTWIHLTVNAPPTFLETPPAFVEVRDREALSLTCTAIGNPQPVIIWKRSDLAVQSGDAVQVRNGTLSIAVVERASAGTYTCHASSKEGTITHTTRVLVQGPPVIVVPPQNVTVNISQDAFLACQAEAYPGNLTYTWFQGSSNVFHLSHLQARVRILVDGSLLLQRATPDDTGKYTCVASNGLWKPPSASAFVTVLYPAQVTTMLPETHLPKGMRGVIRCPTRANPPLLSVSWTRDGHPLELGKLPGWSARPDGSIVIATGNDDALGVYTCTPYNSYGTAGASRPTRVLLKDPPAFTVRPKEEYFQEVGRELVIPCSAHGDPPPTITWGKVGSAGQSGAQVDGNGSLVFRPLVKEQHGRWECTATNPVASVSTATSVHVLGTSPHAVTNVSVLPLLLAANISWEPGFDGGYFQRFSVWYTPLAKHPPRAHHDWVSLSVPAGAQHLLVENLQPDTSYQFSILAQNKLGSGPFSQIVTSVPRGFPVTTVPPEPPAMTLHVFLSPPQALTANETSRGVLLRWEPPAQLSVALSGYALELRQDKGAWEVLERSIPGTESQVLVPGLIKDAFYEFRLVAFAGSYISDPSNTVNVSTAGMEVYPSRTQLPELLPQPVLAGVIGGICFLSVAVIFSTVAACIMNRRRAARIQKRRQDPPLVFSPSQKLPAPHPSHGAGSPAGAAKLKLQPSPCPSLRRALLWGEKAGTSLGLSIAGAGSGYAVYESHVGEHVPLERIRRGPDGRFVVETAETESGFTPSPQDPPTPRGPQPEEEKEPVWHQGVALRPRPPGDPPAPSGRRRGRYFGYGSSSPVAEAAALCIVDVSPVASAATLPYSPGPPSTRWDSLPLQGPPPGTAASPQHAAAPPAQSGILQYLSLPFFKEMCVDGDWPPPEDPPQPPAAPQHPEGGLDCTDPCAKAAAPPAATLLQPPKLPLGPAKASLPGPPTWPTPPEPNHRGPPGCRTEAGDVPPPEKLPRGSLTSQSSGRGSASFLRPPSLAPSLGGPGPGTPPGDGGSWQEGKVSTEPAPSGAGKRRDTSVDESYEWDAEVALASDLLAALQLYRAAAPTSTYDPQWTPASDPWQTPGATADVGLYPPVDLGGDPWPAPWCCGGFLPVTLAGYQMLWLTTPVNPWRIPGGPPVTAMRDPQWTTPSNTGKAATGDPGTSTVPHQQFPGRCGGPHQATPAETQAERCQLTPESPQETRWNPAHYSPGAVADPHPVTPGRPQRTAAGDTRQAIVDTALWNPPSDSRQTPRLGPLASPWTLPGKPVVDTCWVPLAGSRML
SIO_010081: IGSF9
subclass of: SO_0000673
so part of: IGSF9
location: complement(join(504097..504461,504554..504620,504944..505165,507898..507997,508118..509205,509511..509556,509745..509915,510273..510357,510466..510716,510834..511009,511096..511219,511361..511511,511823..511939,512033..512173,512252..512394,512470..512615,512820..512961,513056..513173,513323..513474,513759..513911,516414..516599,516827..516884))
location: region:504097-516884:-1
so has part: feature:516827-516884:-1:exon
so has part: feature:516414-516599:-1:exon
so has part: feature:513759-513911:-1:exon
so has part: feature:513323-513474:-1:exon
so has part: feature:513056-513173:-1:exon
so has part: feature:512820-512961:-1:exon
so has part: feature:512470-512615:-1:exon
so has part: feature:512252-512394:-1:exon
so has part: feature:512033-512173:-1:exon
so has part: feature:511823-511939:-1:exon
so has part: feature:511361-511511:-1:exon
so has part: feature:511096-511219:-1:exon
so has part: feature:510834-511009:-1:exon
so has part: feature:510466-510716:-1:exon
so has part: feature:510273-510357:-1:exon
so has part: feature:509745-509915:-1:exon
so has part: feature:509511-509556:-1:exon
so has part: feature:508118-509205:-1:exon
so has part: feature:507898-507997:-1:exon
so has part: feature:504944-505165:-1:exon
so has part: feature:504554-504620:-1:exon
so has part: feature:504097-504461:-1:exon

XP_035202330.1
type: Protein
SIO_000068: ncbiprotein

position:516884:-1
position: 516884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516827-516884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516414-516599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513759-513911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513323-513474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513056-513173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:512820-512961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:512470-512615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:512252-512394:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512033-512173:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511823-511939:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511361-511511:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511096-511219:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:510834-511009:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:510466-510716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:510273-510357:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:509745-509915:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:509511-509556:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:508118-509205:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:507898-507997:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:504944-505165:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:504554-504620:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:504097-504461:-1:exon

DUSP23
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: DUSP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(519331..520822)
location: region:519331-520822:-1
so has part: feature:519331-520822:-1:exon
subclass of: SO_0000010

118178142
type: Gene
SIO_000068: ncbigene

position:519331:-1
position: 519331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520822:-1
position: 520822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519331-520822:-1:exon

DUSP23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: DUSP23
product: dual specificity phosphatase 23, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_035346433.1
SIO_010081: DUSP23
subclass of: SO_0000673
so part of: DUSP23
location: complement(join(519331..519503,519609..519790,520054..520407,520812..520822))
location: region:519331-520822:-1
so has part: feature:520812-520822:-1:exon
so has part: feature:520054-520407:-1:exon
so has part: feature:519609-519790:-1:exon
so has part: feature:519331-519503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520812-520822:-1:exon

position:520812:-1
position: 520812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520054-520407:-1:exon

position:520054:-1
position: 520054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520407:-1
position: 520407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:519609-519790:-1:exon

position:519609:-1
position: 519609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519790:-1
position: 519790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519331-519503:-1:exon

position:519503:-1
position: 519503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUSP23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: DUSP23
product: dual specificity phosphatase 23, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035346432.1
SIO_010081: DUSP23
subclass of: SO_0000673
so part of: DUSP23
location: complement(join(519331..519503,519609..519790,520054..520459))
location: region:519331-520459:-1
so has part: feature:520054-520459:-1:exon
so has part: feature:519609-519790:-1:exon
so has part: feature:519331-519503:-1:exon

position:520459:-1
position: 520459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520054-520459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519609-519790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519331-519503:-1:exon

DUSP23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: DUSP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 23 isoform X1
translation: MVEPPNFSWVAQGRLAGLAMPREPGHYRFLLGQGVRHLVSLSERPPPHHGCCPAVQLHRIRVPDFSPPTPGQIQSFLQLVEEANGRGEAVAVHCMLGHGRTGTMLACYLVKTQKMSGSDAIREIRRLRPGSIETREQEQAVIHFHQRFSAGKDTEEA
SIO_010081: DUSP23
subclass of: SO_0000673
so part of: DUSP23
location: complement(join(519476..519503,519609..519790,520054..520317))
location: region:519476-520317:-1
so has part: feature:520054-520317:-1:exon
so has part: feature:519609-519790:-1:exon
so has part: feature:519476-519503:-1:exon

XP_035202323.1
type: Protein
SIO_000068: ncbiprotein

position:519476:-1
position: 519476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520317:-1
position: 520317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520054-520317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519609-519790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519476-519503:-1:exon

DUSP23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: DUSP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 23 isoform X1
translation: MVEPPNFSWVAQGRLAGLAMPREPGHYRFLLGQGVRHLVSLSERPPPHHGCCPAVQLHRIRVPDFSPPTPGQIQSFLQLVEEANGRGEAVAVHCMLGHGRTGTMLACYLVKTQKMSGSDAIREIRRLRPGSIETREQEQAVIHFHQRFSAGKDTEEA
SIO_010081: DUSP23
subclass of: SO_0000673
so part of: DUSP23
location: complement(join(519476..519503,519609..519790,520054..520317))
location: region:519476-520317:-1
so has part: feature:520054-520317:-1:exon
so has part: feature:519609-519790:-1:exon
so has part: feature:519476-519503:-1:exon

XP_035202324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520054-520317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519609-519790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519476-519503:-1:exon

DUSP23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: DUSP23
product: dual specificity phosphatase 23, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035346434.1
SIO_010081: DUSP23
subclass of: SO_0000673
so part of: DUSP23
location: complement(join(519605..519790,520054..520460))
location: region:519605-520460:-1
so has part: feature:520054-520460:-1:exon
so has part: feature:519605-519790:-1:exon

position:519605:-1
position: 519605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520460:-1
position: 520460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520054-520460:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519605-519790:-1:exon

DUSP23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: DUSP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 23 isoform X2
translation: MVEPPNFSWVAQGRLAGLAMPREPGHYRFLLGQGVRHLVSLSERPPPHHGCCPAVQLHRIRVPDFSPPTPGQIQSFLQLVEEANGRGEAVAVHCMLGHGRTGTMLACYLVKTQKMSGSDAIREIRRLRPGSIETREQEQAVIHFHQRFR
SIO_010081: DUSP23
subclass of: SO_0000673
so part of: DUSP23
location: complement(join(519605..519790,520054..520317))
location: region:519605-520317:-1
so has part: feature:520054-520317:-1:exon
so has part: feature:519605-519790:-1:exon

XP_035202325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520054-520317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519605-519790:-1:exon

LOC118178137
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118178137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(522702..524530)
location: region:522702-524530:-1
so has part: feature:522702-524530:-1:exon
subclass of: SO_0000010

118178137
type: Gene
SIO_000068: ncbigene

position:522702:-1
position: 522702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524530:-1
position: 524530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522702-524530:-1:exon

LOC118178137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178137
product: serum amyloid P-component-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346424.1
SIO_010081: LOC118178137
subclass of: SO_0000673
so part of: LOC118178137
location: complement(join(522702..523392,523704..523873,523968..524069,524308..524530))
location: region:522702-524530:-1
so has part: feature:524308-524530:-1:exon
so has part: feature:523968-524069:-1:exon
so has part: feature:523704-523873:-1:exon
so has part: feature:522702-523392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:524308-524530:-1:exon

position:524308:-1
position: 524308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:523968-524069:-1:exon

position:523968:-1
position: 523968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524069:-1
position: 524069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:523704-523873:-1:exon

position:523704:-1
position: 523704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523873:-1
position: 523873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:522702-523392:-1:exon

position:523392:-1
position: 523392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118178137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum amyloid P-component-like
translation: MVHGDMGTLQLCLLILAGLFGLSALEGAAEKMTAWIQPYPPAPTMYHQLMLSCEVTGDASVKEFLWEKEGSRDPLQKGQSNVLIFKSFNESHLGTYICTATGSLGTAVATYELWIDDLINQVFVFPRETKDSYVLVRAKPEQPLLNFTVCLRSYTDLARPHSLFSYATKEQDNEILLSKPKPTEYHFYVGGKFVTFRVPESFSTSEHVCASWESPTSIVRFWLNGKPWPRKGLQKDYVVGAEAAITLGQEQDVLGGGFDARQSFVGEISDVYMWDRELTTGEVKAAMNNNPSPAPIFGWRNFPYKIHGEVYLKG
SIO_010081: LOC118178137
subclass of: SO_0000673
so part of: LOC118178137
location: complement(join(522797..523392,523704..523873,523968..524069,524308..524384))
location: region:522797-524384:-1
so has part: feature:524308-524384:-1:exon
so has part: feature:523968-524069:-1:exon
so has part: feature:523704-523873:-1:exon
so has part: feature:522797-523392:-1:exon

XP_035202315.1
type: Protein
SIO_000068: ncbiprotein

position:522797:-1
position: 522797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524384:-1
position: 524384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524308-524384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523968-524069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523704-523873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:522797-523392:-1:exon

LOC118178141
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118178141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(524897..526110)
location: region:524897-526110:-1
so has part: feature:524897-526110:-1:exon
subclass of: SO_0000010

118178141
type: Gene
SIO_000068: ncbigene

position:524897:-1
position: 524897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526110:-1
position: 526110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524897-526110:-1:exon

LOC118178141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178141
product: serum amyloid P-component-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346430.1
SIO_010081: LOC118178141
subclass of: SO_0000673
so part of: LOC118178141
location: complement(join(524897..525002,525080..525738,526032..526110))
location: region:524897-526110:-1
so has part: feature:526032-526110:-1:exon
so has part: feature:525080-525738:-1:exon
so has part: feature:524897-525002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526032-526110:-1:exon

position:526032:-1
position: 526032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525080-525738:-1:exon

position:525080:-1
position: 525080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525738:-1
position: 525738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:524897-525002:-1:exon

position:525002:-1
position: 525002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118178141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178141
product: serum amyloid P-component-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035346431.1
SIO_010081: LOC118178141
subclass of: SO_0000673
so part of: LOC118178141
location: complement(join(524900..525005,525083..525738,526032..526110))
location: region:524900-526110:-1
so has part: feature:526032-526110:-1:exon
so has part: feature:525083-525738:-1:exon
so has part: feature:524900-525005:-1:exon

position:524900:-1
position: 524900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526032-526110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525083-525738:-1:exon

position:525083:-1
position: 525083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:524900-525005:-1:exon

position:525005:-1
position: 525005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118178141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum amyloid P-component-like
translation: MGRLRLWLAVLAGLSGVTAQEDLYRKVFVFRTDPSDAYVVLRAKPEQPLLNFTVCLRSYTDLARPHSLFSYATKAQDNEILLFKPKPTEYRFYMGGKFVTFRVPEGRGDWEHVCASWESATGIAEFWLNGKPWPRKGLQRGYAVGAEAAILLGQEQDAFGGGFDVYNSFTGELADVHLWDAGLSPDKMRAAYQSLRLPPALLAWRSLSYETKGDVVVKPRLREALGS
SIO_010081: LOC118178141
subclass of: SO_0000673
so part of: LOC118178141
location: complement(join(525119..525738,526032..526095))
location: region:525119-526095:-1
so has part: feature:526032-526095:-1:exon
so has part: feature:525119-525738:-1:exon

XP_035202321.1
type: Protein
SIO_000068: ncbiprotein

position:525119:-1
position: 525119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526095:-1
position: 526095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526032-526095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525119-525738:-1:exon

LOC118178141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serum amyloid P-component-like
translation: MGRLRLWLAVLAGLSGVTAQEDLYRKVFVFRTDPSDAYVVLRAKPEQPLLNFTVCLRSYTDLARPHSLFSYATKAQDNEILLFKPKPTEYRFYMGGKFVTFRVPEGRGDWEHVCASWESATGIAEFWLNGKPWPRKGLQRGYAVGAEAAILLGQEQDAFGGGFDVYNSFTGELADVHLWDAGLSPDKMRAAYQSLRLPPALLAWRSLSYETKGDVVVKPRLREALGS
SIO_010081: LOC118178141
subclass of: SO_0000673
so part of: LOC118178141
location: complement(join(525119..525738,526032..526095))
location: region:525119-526095:-1
so has part: feature:526032-526095:-1:exon
so has part: feature:525119-525738:-1:exon

XP_035202322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526032-526095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525119-525738:-1:exon

ACKR1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ACKR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(527493..529706)
location: region:527493-529706:-1
so has part: feature:527493-529706:-1:exon
subclass of: SO_0000010

118178139
type: Gene
SIO_000068: ncbigene

position:527493:-1
position: 527493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529706:-1
position: 529706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527493-529706:-1:exon

ACKR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ACKR1
product: atypical chemokine receptor 1 (Duffy blood group)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_035346427.1
SIO_010081: ACKR1
subclass of: SO_0000673
so part of: ACKR1
location: complement(join(527493..528865,529440..529706))
location: region:527493-529706:-1
so has part: feature:529440-529706:-1:exon
so has part: feature:527493-528865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529440-529706:-1:exon

position:529440:-1
position: 529440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527493-528865:-1:exon

position:528865:-1
position: 528865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACKR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ACKR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atypical chemokine receptor 1
translation: MGNCIPVSPEVLRNETFVDLLDLLGNFTINEDYLTDYTASEPCHNTYCPFFQCAAPAFLASTCVAAALATGVLLVALAKCPHAWPRHRALVAQLVAATGLFAAVLPAVAAGIGQGWRLGAGACKLTQLLWHCSIFAQGLLVASGCCGSVWSRWDPRSQRLATSIWVWALLLAVPAALASGTVAAPEVSCIRRNVEVLSPAYLLHLASCLCIFLLLPAALLVATLVRRGQGAGWGLGAGASWLFFVLWLPYSVGLAVDFLLHAELLQRTCDIFERFDYALGLCEALGVLHCCLGPPVLLAAGLCRRKVGSAGGF
SIO_010081: ACKR1
subclass of: SO_0000673
so part of: ACKR1
location: complement(join(527945..528865,529440..529460))
location: region:527945-529460:-1
so has part: feature:529440-529460:-1:exon
so has part: feature:527945-528865:-1:exon

XP_035202318.1
type: Protein
SIO_000068: ncbiprotein

position:527945:-1
position: 527945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529460:-1
position: 529460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529440-529460:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527945-528865:-1:exon

LOC118178138
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118178138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531606..532678)
location: region:531606-532678:-1
so has part: feature:531606-532678:-1:exon
subclass of: SO_0000010

118178138
type: Gene
SIO_000068: ncbigene

position:531606:-1
position: 531606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532678:-1
position: 532678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531606-532678:-1:exon

LOC118178138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178138
product: uncharacterized LOC118178138, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_035346425.1
SIO_010081: LOC118178138
subclass of: SO_0000673
so part of: LOC118178138
location: complement(join(531606..531690,531726..532678))
location: region:531606-532678:-1
so has part: feature:531726-532678:-1:exon
so has part: feature:531606-531690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531726-532678:-1:exon

position:531726:-1
position: 531726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531606-531690:-1:exon

position:531690:-1
position: 531690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118178138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118178138
product: uncharacterized LOC118178138, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035346426.1
SIO_010081: LOC118178138
subclass of: SO_0000673
so part of: LOC118178138
location: complement(join(531606..531687,531723..532678))
location: region:531606-532678:-1
so has part: feature:531723-532678:-1:exon
so has part: feature:531606-531687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531723-532678:-1:exon

position:531723:-1
position: 531723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531606-531687:-1:exon

position:531687:-1
position: 531687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118178138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118178138 isoform X1
translation: MGSIGSAPRSFLCPPCPSQPLPGAGAELEKVLLAPRAAAKSSRNAWVLCLGGLGVSKEIWWALTTSNLFHPRGNHISSKSDGNQKLSPTSPPHPRGPHAPPNPTSTGLGPLGSLAPSLTLGMRLCAPQHRVVWMRGVHRSHPLASILGCLGEGNLLGRSESPRWGGQPHPGGEGRAWFRCKVPLGLETWLPSRPRELGTRRRVVGKARRWVQVGARDAFLASMARARPASLRHQQGITHLKREARSLHHPRRGKPAVFSVWSLPVRLLRGGGRWPWVRVGAPSSHRGTQTLLPEVTLRMPTLLTPSLRTQTSNIHYRTDAIP
SIO_010081: LOC118178138
subclass of: SO_0000673
so part of: LOC118178138
location: complement(join(531650..531690,531726..532653))
location: region:531650-532653:-1
so has part: feature:531726-532653:-1:exon
so has part: feature:531650-531690:-1:exon

XP_035202316.1
type: Protein
SIO_000068: ncbiprotein

position:531650:-1
position: 531650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532653:-1
position: 532653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531726-532653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531650-531690:-1:exon

LOC118178138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118178138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118178138 isoform X2
translation: MGSIGSAPRSFLCPPCPSQPLPGAGAELEKVLLAPRAAAKSSRNAWVLCLGGLGVSKEIWWALTTSNLFHPRGNHISSKSDGNQKLSPTSPPHPRGPHAPPNPTSTGLGPLGSLAPSLTLGMRLCAPQHRVVWMRGVHRSHPLASILGCLGEGNLLGRSESPRWGGQPHPGGEGRAWFRCKVPLGLETWLPSRPRELGTRRRVVGKARRWVQVGARDAFLASMARARPASLRHQQGITHLKREARSLHHPRRGKPAVFSVWSLPVRLLRGGGRWPWVRVGAPSSHRGTQTLLPEVTLRMPTLLTPSLRTQPSNIHYRTDAIP
SIO_010081: LOC118178138
subclass of: SO_0000673
so part of: LOC118178138
location: complement(join(531650..531687,531723..532653))
location: region:531650-532653:-1
so has part: feature:531723-532653:-1:exon
so has part: feature:531650-531687:-1:exon

XP_035202317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531723-532653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531650-531687:-1:exon

CADM3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CADM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(532950..539063)
location: region:532950-539063:-1
so has part: feature:532950-539063:-1:exon
subclass of: SO_0000010

118178136
type: Gene
SIO_000068: ncbigene

position:532950:-1
position: 532950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539063:-1
position: 539063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532950-539063:-1:exon

CADM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CADM3
product: cell adhesion molecule 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035346423.1
SIO_010081: CADM3
subclass of: SO_0000673
so part of: CADM3
location: complement(join(532950..533917,534673..534798,537216..537385,537623..537713,537815..537985,538223..538360,538575..538727,538865..539063))
location: region:532950-539063:-1
so has part: feature:538865-539063:-1:exon
so has part: feature:538575-538727:-1:exon
so has part: feature:538223-538360:-1:exon
so has part: feature:537815-537985:-1:exon
so has part: feature:537623-537713:-1:exon
so has part: feature:537216-537385:-1:exon
so has part: feature:534673-534798:-1:exon
so has part: feature:532950-533917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538865-539063:-1:exon

position:538865:-1
position: 538865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:538575-538727:-1:exon

position:538575:-1
position: 538575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538727:-1
position: 538727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:538223-538360:-1:exon

position:538223:-1
position: 538223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538360:-1
position: 538360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537815-537985:-1:exon

position:537815:-1
position: 537815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537985:-1
position: 537985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537623-537713:-1:exon

position:537623:-1
position: 537623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537713:-1
position: 537713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:537216-537385:-1:exon

position:537216:-1
position: 537216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537385:-1
position: 537385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:534673-534798:-1:exon

position:534673:-1
position: 534673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534798:-1
position: 534798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:532950-533917:-1:exon

position:533917:-1
position: 533917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CADM3
product: cell adhesion molecule 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035346422.1
SIO_010081: CADM3
subclass of: SO_0000673
so part of: CADM3
location: complement(join(532950..533917,534259..534324,534673..534798,537216..537385,537623..537713,537815..537985,538223..538360,538575..538727,538865..539063))
location: region:532950-539063:-1
so has part: feature:538865-539063:-1:exon
so has part: feature:538575-538727:-1:exon
so has part: feature:538223-538360:-1:exon
so has part: feature:537815-537985:-1:exon
so has part: feature:537623-537713:-1:exon
so has part: feature:537216-537385:-1:exon
so has part: feature:534673-534798:-1:exon
so has part: feature:534259-534324:-1:exon
so has part: feature:532950-533917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538865-539063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:538575-538727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538223-538360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537815-537985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537623-537713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537216-537385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534673-534798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534259-534324:-1:exon

position:534259:-1
position: 534259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534324:-1
position: 534324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:532950-533917:-1:exon

CADM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CADM3
product: cell adhesion molecule 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035346421.1
SIO_010081: CADM3
subclass of: SO_0000673
so part of: CADM3
location: complement(join(532950..533917,534259..534327,534673..534798,537216..537385,537623..537713,537815..537985,538223..538360,538575..538727,538865..539063))
location: region:532950-539063:-1
so has part: feature:538865-539063:-1:exon
so has part: feature:538575-538727:-1:exon
so has part: feature:538223-538360:-1:exon
so has part: feature:537815-537985:-1:exon
so has part: feature:537623-537713:-1:exon
so has part: feature:537216-537385:-1:exon
so has part: feature:534673-534798:-1:exon
so has part: feature:534259-534327:-1:exon
so has part: feature:532950-533917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538865-539063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:538575-538727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538223-538360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537815-537985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537623-537713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537216-537385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534673-534798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534259-534327:-1:exon

position:534327:-1
position: 534327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:532950-533917:-1:exon