Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 23, BPBGC_Ojam_1.0, whole genome shotgun sequence.
type: Entry
definition: Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 23, BPBGC_Ojam_1.0, whole genome shotgun sequence.
sequence version: NC_048915.1
sequence date: 2020-07-05
sequence: sequence
division: CON
label: NC_048915.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA641662
dblink: SAMN13257492
keyword: WGS
keyword: RefSeq
source: Oxyura jamaicensis (ruddy duck)
organism: Oxyura jamaicensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021821.1.\nAssembly name: BPBGC_Ojam_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2020/03/10. The original whole-genome shotgun project\nhas the accession JAACYN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Date :: 01-SEP-2019\nAssembly Method :: Supernova 2 v. SEPT-2019\nAssembly Name :: BPBGC_Ojam_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Oxyura jamaicensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7097135
topology: linear
so has quality: SO_0000987
location: 1..7097135
location: region:1-7097135:1
RO_0002162: 8884

NC_048915
type: RefSeq
SIO_000068: refseq

PRJNA641662
type: BioProject
SIO_000068: bioproject

SAMN13257492
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7097135:1
position: 7097135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7097135:1:source
so part of: sequence
organism: Oxyura jamaicensis
mol type: genomic DNA
isolate: SHBP4307
chromosome: 23
sex: female
tissue type: blood
dev stage: adult
country: USA: Scotland Neck, NC
breed: ruddy duck

8884
type: Taxonomy
SIO_000068: taxonomy

RLF
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2247..44858
location: region:2247-44858:1
so has part: feature:2247-44858:1:exon
subclass of: SO_0000010

118177603
type: Gene
SIO_000068: ncbigene

position:2247:1
position: 2247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44858:1
position: 44858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2247-44858:1:exon

RLF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RLF
product: RLF zinc finger
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_035345439.1
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: join(2247..2474,7455..7609,14659..14740,27929..28061,32485..32687,35695..35831,36950..37091,39723..44858)
location: region:2247-44858:1
so has part: feature:2247-2474:1:exon
so has part: feature:7455-7609:1:exon
so has part: feature:14659-14740:1:exon
so has part: feature:27929-28061:1:exon
so has part: feature:32485-32687:1:exon
so has part: feature:35695-35831:1:exon
so has part: feature:36950-37091:1:exon
so has part: feature:39723-44858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2247-2474:1:exon

position:2474:1
position: 2474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7455-7609:1:exon

position:7455:1
position: 7455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7609:1
position: 7609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14659-14740:1:exon

position:14659:1
position: 14659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14740:1
position: 14740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27929-28061:1:exon

position:27929:1
position: 27929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28061:1
position: 28061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32485-32687:1:exon

position:32485:1
position: 32485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32687:1
position: 32687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35695-35831:1:exon

position:35695:1
position: 35695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35831:1
position: 35831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:36950-37091:1:exon

position:36950:1
position: 36950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37091:1
position: 37091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:39723-44858:1:exon

position:39723:1
position: 39723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RLF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Rlf
translation: MRSVDAGHVILAYALWGWVQMADAESEAAPRPEMQRLVAALRARLWQLQTELCEQEVSEASSRSYCRGFCQTLLQYAGSRGASEHVLPFLEVYRISIQSFANARPYLTTECEDVLLVLGRLVLSCFELLLSIPESELPHEVWLGFHQSIQDSHDALLEFGNNNLQILVDITREGVWKNPVLLKILSQQPVETEEANKLITREGPSFLQMRIKHLMKSNCIPQATSLSKLCADSPEIANVSSFRQAYITCVCSMLPNEDSIKEIAKVDCKEVLDIICNLESEGQENTAFILCTTYLTHQLQTANVYCSWELTLFWSKLQRRIDPSLDSFLERCRQFGIIAKTLQHLFFLIRVIQSEAEEAGLAVSVLLCVRALQIRSSGSDEMKTSVCKTIACLLPEDLEVRRACQLTEFLLEPTLGGFNMLEELYMQPDQKFDEENALVPNSLRCELLLALKAYWPFDPEFWDWKTLKRHCLKLLGKVGSDSEDDASFNMSINETDMLETFLSDYEEAKEHKYYDGKDTISYHKEKARVKKPIGSSERYQRWLQYKFFCVLCKRECIEARILHHSKMHMEDGIYTCPVCTKKFKRKEFFVPHVMEHVKMPPSRTHRPKKKIILKKERSPQKTAASSSPTPALQEKSYQPEQSEKFENDAHEYVTFRQLENCQLQDRDIYPCPGTDCSRVFKQFKYLSVHLKAEHQNNDENAKHYLDMKNRREKCAFCRRHFMTSFHLREHERVHCGPQPYMCVSMDCYARFGSVNELLNHKQTHDDLRYKCELNGCNIVFSDLGQLYHHEAQHFRDASYTCNFFGCKKFYYSKTEFQNHLAVHNIAVSNGEVKQTVKLEDSVSKDKCSYLQESRLLEQSENSNQNENLDPTRSQEIPQIKEEVLSDSEDLDDESNCSLHCGNHSAAASVNQGQVSPLLMETLAHSQTVPGFLMSQEGVFHSTDVKQQCSNVAVCFGEKKFSCGFEGCCSTHKNSRGTQKHLRRAHPYNFKGKKKMEMKTKDFLDLLSDAQDSKSPTDINTELGHSSDTNADSPESLYCNINGKGNSGFKEETCPSPETSFYDSSKDSNIEDNMLELMLGLKHLSLKNSNMQNSSRSKHFLGSLQSYTSRDAKCPESVVDETTSKFQFQEQQENLPSQYLTQLAAKPFFCECQGCTCEFVTREALLMHYVKKHNYSKEMVLQLNMFQHRYSPFKCHICQRSFTRKTHLRIHYRNKHQIGCERVTHKFEHVGLCTDDIHKNSTVPTPVCATKVEFIEHSEQLCHPKKEECSSETDLESGEETDDVTRKSSKIASLDSHREELEAREGRGSKRTVAKGNLCYILHKYHKPFHCIHKSCNSAFTNQKGLIRHYRTVHQYNKEQLCLEKDKARTKRELVKCKKIFACKHKECGKRFLCSKDLAKHCSDFHNEHLEDQKLLSETESARFACNQAQCPAVFYTFNKLKQHLVEEHASEEKINKDFEIHCDLNGCDRVFTNYSHYSQHVYFRHSEYYDSLFGNQKEEEDNHDKNKNEQSYLKDTLDLNKQNGKQLKEKPKRVSRSKEKHLINFKTKEEALQMCKEKSNQTQYPCMVQGCLSVVKLESSILRHYKRTHQMTNMYIEQRIQKLVVCVKCGIMTEKQTSSETALDLDKKGIKVKEEASANPEYVQESEKILVPNSDCEHQDVSNEDQKRNSVSFDTGAFMYSGTLKYNHTSKTSSFEEHNVRESVVCKTEDFSENSERENSSNFSGLQLELPREKDTEGCQHSAVTQNAKRNVVFTTKDKLQKPSVSRPFDLKTYKPMGFESSFLKFIQESEEKDDDDDDFDEVVEWESPEQLPVDKILQKEGDSQRDTPVNNFVDDKNVIIPQNNHGQLTEIQPLLSESSSAPSLENLRAILDKALTDCGDLALKQLHYLRPVVVLERSKFSTSLIDLFPTKKADELCVGST
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: join(2262..2474,7455..7609,14659..14740,27929..28061,32485..32687,35695..35831,36950..37091,39723..44426)
location: region:2262-44426:1
so has part: feature:2262-2474:1:exon
so has part: feature:7455-7609:1:exon
so has part: feature:14659-14740:1:exon
so has part: feature:27929-28061:1:exon
so has part: feature:32485-32687:1:exon
so has part: feature:35695-35831:1:exon
so has part: feature:36950-37091:1:exon
so has part: feature:39723-44426:1:exon

XP_035201330.1
type: Protein
SIO_000068: ncbiprotein

position:2262:1
position: 2262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44426:1
position: 44426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2262-2474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7455-7609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14659-14740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27929-28061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32485-32687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35695-35831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36950-37091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39723-44426:1:exon

ZMPSTE24
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 47836..68413
location: region:47836-68413:1
so has part: feature:47836-68413:1:exon
subclass of: SO_0000010

118177607
type: Gene
SIO_000068: ncbigene

position:47836:1
position: 47836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68413:1
position: 68413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47836-68413:1:exon

ZMPSTE24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ZMPSTE24
product: zinc metallopeptidase STE24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_035345447.1
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(47836..48015,49673..49819,53686..53772,56880..57032,60588..60729,62754..62914,64113..64217,67116..67259,67609..68413)
location: region:47836-68413:1
so has part: feature:47836-48015:1:exon
so has part: feature:49673-49819:1:exon
so has part: feature:53686-53772:1:exon
so has part: feature:56880-57032:1:exon
so has part: feature:60588-60729:1:exon
so has part: feature:62754-62914:1:exon
so has part: feature:64113-64217:1:exon
so has part: feature:67116-67259:1:exon
so has part: feature:67609-68413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47836-48015:1:exon

position:48015:1
position: 48015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49673-49819:1:exon

position:49673:1
position: 49673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49819:1
position: 49819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53686-53772:1:exon

position:53686:1
position: 53686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53772:1
position: 53772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56880-57032:1:exon

position:56880:1
position: 56880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57032:1
position: 57032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:60588-60729:1:exon

position:60588:1
position: 60588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60729:1
position: 60729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62754-62914:1:exon

position:62754:1
position: 62754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62914:1
position: 62914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:64113-64217:1:exon

position:64113:1
position: 64113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64217:1
position: 64217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:67116-67259:1:exon

position:67116:1
position: 67116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67259:1
position: 67259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:67609-68413:1:exon

position:67609:1
position: 67609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMPSTE24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ZMPSTE24
product: zinc metallopeptidase STE24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035345446.1
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(47837..48015,49673..49819,53686..53772,54479..54595,56880..57032,60588..60729,62754..62914,64113..64217,67116..67259,67609..68413)
location: region:47837-68413:1
so has part: feature:47837-48015:1:exon
so has part: feature:49673-49819:1:exon
so has part: feature:53686-53772:1:exon
so has part: feature:54479-54595:1:exon
so has part: feature:56880-57032:1:exon
so has part: feature:60588-60729:1:exon
so has part: feature:62754-62914:1:exon
so has part: feature:64113-64217:1:exon
so has part: feature:67116-67259:1:exon
so has part: feature:67609-68413:1:exon

position:47837:1
position: 47837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47837-48015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49673-49819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53686-53772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54479-54595:1:exon

position:54479:1
position: 54479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54595:1
position: 54595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:56880-57032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60588-60729:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62754-62914:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64113-64217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67116-67259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67609-68413:1:exon

ZMPSTE24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAAX prenyl protease 1 homolog isoform X1
translation: MALRGELWAELPAEKRIFCSVLLFSWAVYLWEAFLAHRQRRVYRTTTHVPRELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSEVEGTMILICGGIPFLWDLSGQISGRTGFGPEYEIIQSLVFLLLATLFSALTGVPWSLYNTFVIEEKHGFNQQTLGFFFKDAIKKFVVTQCILLPVTSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFIPLPEGELKQQIETMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSALNKEPAEGEEGENEETKSKTKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYETQPTLIGLMIIFQFIFSPYNEILSFCLTVLSRRFEFQADAFAKELGKAKDLYSALIKLNKDNLGFPVSDWIFSMWHYSHPPLLERLQALKDAKQE
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(47899..48015,49673..49819,53686..53772,54479..54595,56880..57032,60588..60729,62754..62914,64113..64217,67116..67259,67609..67833)
location: region:47899-67833:1
so has part: feature:47899-48015:1:exon
so has part: feature:49673-49819:1:exon
so has part: feature:53686-53772:1:exon
so has part: feature:54479-54595:1:exon
so has part: feature:56880-57032:1:exon
so has part: feature:60588-60729:1:exon
so has part: feature:62754-62914:1:exon
so has part: feature:64113-64217:1:exon
so has part: feature:67116-67259:1:exon
so has part: feature:67609-67833:1:exon

XP_035201337.1
type: Protein
SIO_000068: ncbiprotein

position:47899:1
position: 47899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67833:1
position: 67833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47899-48015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49673-49819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53686-53772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54479-54595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56880-57032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60588-60729:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62754-62914:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64113-64217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67116-67259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67609-67833:1:exon

ZMPSTE24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAAX prenyl protease 1 homolog isoform X2
translation: MALRGELWAELPAEKRIFCSVLLFSWAVYLWEAFLAHRQRRVYRTTTHVPRELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSEVEGTMILICGGIPFLWDLSGQISGRTGFGPEYETLGFFFKDAIKKFVVTQCILLPVTSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFIPLPEGELKQQIETMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSALNKEPAEGEEGENEETKSKTKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYETQPTLIGLMIIFQFIFSPYNEILSFCLTVLSRRFEFQADAFAKELGKAKDLYSALIKLNKDNLGFPVSDWIFSMWHYSHPPLLERLQALKDAKQE
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(47899..48015,49673..49819,53686..53772,56880..57032,60588..60729,62754..62914,64113..64217,67116..67259,67609..67833)
location: region:47899-67833:1
so has part: feature:47899-48015:1:exon
so has part: feature:49673-49819:1:exon
so has part: feature:53686-53772:1:exon
so has part: feature:56880-57032:1:exon
so has part: feature:60588-60729:1:exon
so has part: feature:62754-62914:1:exon
so has part: feature:64113-64217:1:exon
so has part: feature:67116-67259:1:exon
so has part: feature:67609-67833:1:exon

XP_035201338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47899-48015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49673-49819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53686-53772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56880-57032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60588-60729:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62754-62914:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64113-64217:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67116-67259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67609-67833:1:exon

KDM1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: KDM1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 75427..123319
location: region:75427-123319:1
so has part: feature:75427-123319:1:exon
subclass of: SO_0000010

118177606
type: Gene
SIO_000068: ncbigene

position:75427:1
position: 75427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123319:1
position: 123319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75427-123319:1:exon

KDM1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: KDM1A
product: lysine demethylase 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035345444.1
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: join(75427..75764,78521..78686,83684..83743,87243..87376,91326..91404,92253..92345,93757..93863,95759..95840,97488..97582,101544..101686,102587..102677,103654..103788,106423..106496,107461..107572,107958..108090,108823..109010,109428..109542,111245..111372,116801..116947,117786..123319)
location: region:75427-123319:1
so has part: feature:75427-75764:1:exon
so has part: feature:78521-78686:1:exon
so has part: feature:83684-83743:1:exon
so has part: feature:87243-87376:1:exon
so has part: feature:91326-91404:1:exon
so has part: feature:92253-92345:1:exon
so has part: feature:93757-93863:1:exon
so has part: feature:95759-95840:1:exon
so has part: feature:97488-97582:1:exon
so has part: feature:101544-101686:1:exon
so has part: feature:102587-102677:1:exon
so has part: feature:103654-103788:1:exon
so has part: feature:106423-106496:1:exon
so has part: feature:107461-107572:1:exon
so has part: feature:107958-108090:1:exon
so has part: feature:108823-109010:1:exon
so has part: feature:109428-109542:1:exon
so has part: feature:111245-111372:1:exon
so has part: feature:116801-116947:1:exon
so has part: feature:117786-123319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75427-75764:1:exon

position:75764:1
position: 75764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78521-78686:1:exon

position:78521:1
position: 78521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78686:1
position: 78686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83684-83743:1:exon

position:83684:1
position: 83684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83743:1
position: 83743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87243-87376:1:exon

position:87243:1
position: 87243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87376:1
position: 87376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:91326-91404:1:exon

position:91326:1
position: 91326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91404:1
position: 91404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92253-92345:1:exon

position:92253:1
position: 92253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92345:1
position: 92345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93757-93863:1:exon

position:93757:1
position: 93757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93863:1
position: 93863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:95759-95840:1:exon

position:95759:1
position: 95759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95840:1
position: 95840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:97488-97582:1:exon

position:97488:1
position: 97488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97582:1
position: 97582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:101544-101686:1:exon

position:101544:1
position: 101544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101686:1
position: 101686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:102587-102677:1:exon

position:102587:1
position: 102587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102677:1
position: 102677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:103654-103788:1:exon

position:103654:1
position: 103654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103788:1
position: 103788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:106423-106496:1:exon

position:106423:1
position: 106423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106496:1
position: 106496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:107461-107572:1:exon

position:107461:1
position: 107461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107572:1
position: 107572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:107958-108090:1:exon

position:107958:1
position: 107958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108090:1
position: 108090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:108823-109010:1:exon

position:108823:1
position: 108823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109010:1
position: 109010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:109428-109542:1:exon

position:109428:1
position: 109428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109542:1
position: 109542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:111245-111372:1:exon

position:111245:1
position: 111245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111372:1
position: 111372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:116801-116947:1:exon

position:116801:1
position: 116801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116947:1
position: 116947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:117786-123319:1:exon

position:117786:1
position: 117786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KDM1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: KDM1A
product: lysine demethylase 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035345445.1
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: join(75427..75764,78521..78686,87243..87376,91326..91404,92253..92345,93757..93863,95759..95840,97488..97582,101544..101686,102587..102677,103654..103788,106423..106496,107461..107572,107958..108090,108823..109010,109428..109542,111245..111372,116801..116947,117786..123319)
location: region:75427-123319:1
so has part: feature:75427-75764:1:exon
so has part: feature:78521-78686:1:exon
so has part: feature:87243-87376:1:exon
so has part: feature:91326-91404:1:exon
so has part: feature:92253-92345:1:exon
so has part: feature:93757-93863:1:exon
so has part: feature:95759-95840:1:exon
so has part: feature:97488-97582:1:exon
so has part: feature:101544-101686:1:exon
so has part: feature:102587-102677:1:exon
so has part: feature:103654-103788:1:exon
so has part: feature:106423-106496:1:exon
so has part: feature:107461-107572:1:exon
so has part: feature:107958-108090:1:exon
so has part: feature:108823-109010:1:exon
so has part: feature:109428-109542:1:exon
so has part: feature:111245-111372:1:exon
so has part: feature:116801-116947:1:exon
so has part: feature:117786-123319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75427-75764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78521-78686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87243-87376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91326-91404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92253-92345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93757-93863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95759-95840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97488-97582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101544-101686:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102587-102677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103654-103788:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106423-106496:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107461-107572:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107958-108090:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:108823-109010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:109428-109542:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111245-111372:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:116801-116947:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:117786-123319:1:exon

KDM1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: KDM1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific histone demethylase 1A isoform X1
translation: MLSGGKKAAEAAGAGGEGGPEAPVPPSAAVGALGSSAEGGGTAERTPRKKEPPRASPPGGLSEPPAAGAAPAPGAETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPVPAEEENESEPEEPSGQAGGLQDDNSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELSETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPTPGVPTQQATSI
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: join(75477..75764,78521..78686,83684..83743,87243..87376,91326..91404,92253..92345,93757..93863,95759..95840,97488..97582,101544..101686,102587..102677,103654..103788,106423..106496,107461..107572,107958..108090,108823..109010,109428..109542,111245..111372,116801..116947,117786..117971)
location: region:75477-117971:1
so has part: feature:75477-75764:1:exon
so has part: feature:78521-78686:1:exon
so has part: feature:83684-83743:1:exon
so has part: feature:87243-87376:1:exon
so has part: feature:91326-91404:1:exon
so has part: feature:92253-92345:1:exon
so has part: feature:93757-93863:1:exon
so has part: feature:95759-95840:1:exon
so has part: feature:97488-97582:1:exon
so has part: feature:101544-101686:1:exon
so has part: feature:102587-102677:1:exon
so has part: feature:103654-103788:1:exon
so has part: feature:106423-106496:1:exon
so has part: feature:107461-107572:1:exon
so has part: feature:107958-108090:1:exon
so has part: feature:108823-109010:1:exon
so has part: feature:109428-109542:1:exon
so has part: feature:111245-111372:1:exon
so has part: feature:116801-116947:1:exon
so has part: feature:117786-117971:1:exon

XP_035201335.1
type: Protein
SIO_000068: ncbiprotein

position:75477:1
position: 75477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117971:1
position: 117971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75477-75764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78521-78686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83684-83743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87243-87376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91326-91404:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92253-92345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93757-93863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95759-95840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97488-97582:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101544-101686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:102587-102677:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103654-103788:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106423-106496:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107461-107572:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107958-108090:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108823-109010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109428-109542:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:111245-111372:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:116801-116947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:117786-117971:1:exon

KDM1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: KDM1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific histone demethylase 1A isoform X2
translation: MLSGGKKAAEAAGAGGEGGPEAPVPPSAAVGALGSSAEGGGTAERTPRKKEPPRASPPGGLSEPPAAGAAPAPGAETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPVPAEEENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELSETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPTPGVPTQQATSI
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: join(75477..75764,78521..78686,87243..87376,91326..91404,92253..92345,93757..93863,95759..95840,97488..97582,101544..101686,102587..102677,103654..103788,106423..106496,107461..107572,107958..108090,108823..109010,109428..109542,111245..111372,116801..116947,117786..117971)
location: region:75477-117971:1
so has part: feature:75477-75764:1:exon
so has part: feature:78521-78686:1:exon
so has part: feature:87243-87376:1:exon
so has part: feature:91326-91404:1:exon
so has part: feature:92253-92345:1:exon
so has part: feature:93757-93863:1:exon
so has part: feature:95759-95840:1:exon
so has part: feature:97488-97582:1:exon
so has part: feature:101544-101686:1:exon
so has part: feature:102587-102677:1:exon
so has part: feature:103654-103788:1:exon
so has part: feature:106423-106496:1:exon
so has part: feature:107461-107572:1:exon
so has part: feature:107958-108090:1:exon
so has part: feature:108823-109010:1:exon
so has part: feature:109428-109542:1:exon
so has part: feature:111245-111372:1:exon
so has part: feature:116801-116947:1:exon
so has part: feature:117786-117971:1:exon

XP_035201336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75477-75764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78521-78686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87243-87376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91326-91404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92253-92345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93757-93863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95759-95840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97488-97582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101544-101686:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102587-102677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103654-103788:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106423-106496:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107461-107572:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107958-108090:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:108823-109010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:109428-109542:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111245-111372:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:116801-116947:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:117786-117971:1:exon

LUZP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(123948..162971)
location: region:123948-162971:-1
so has part: feature:123948-162971:-1:exon
subclass of: SO_0000010

118177604
type: Gene
SIO_000068: ncbigene

position:123948:-1
position: 123948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162971:-1
position: 162971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123948-162971:-1:exon

LUZP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LUZP1
product: leucine zipper protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_035345440.1
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(123948..128941,130698..130859,136288..139536,162766..162971))
location: region:123948-162971:-1
so has part: feature:162766-162971:-1:exon
so has part: feature:136288-139536:-1:exon
so has part: feature:130698-130859:-1:exon
so has part: feature:123948-128941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162766-162971:-1:exon

position:162766:-1
position: 162766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136288-139536:-1:exon

position:136288:-1
position: 136288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139536:-1
position: 139536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130698-130859:-1:exon

position:130698:-1
position: 130698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130859:-1
position: 130859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123948-128941:-1:exon

position:128941:-1
position: 128941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LUZP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LUZP1
product: leucine zipper protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035345442.1
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(123948..128941,130698..130859,136288..139536,161004..161069))
location: region:123948-161069:-1
so has part: feature:161004-161069:-1:exon
so has part: feature:136288-139536:-1:exon
so has part: feature:130698-130859:-1:exon
so has part: feature:123948-128941:-1:exon

position:161069:-1
position: 161069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161004-161069:-1:exon

position:161004:-1
position: 161004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136288-139536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130698-130859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123948-128941:-1:exon

LUZP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LUZP1
product: leucine zipper protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_035345443.1
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(123948..128941,130698..130859,136288..139536,156199..156333))
location: region:123948-156333:-1
so has part: feature:156199-156333:-1:exon
so has part: feature:136288-139536:-1:exon
so has part: feature:130698-130859:-1:exon
so has part: feature:123948-128941:-1:exon

position:156333:-1
position: 156333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156199-156333:-1:exon

position:156199:-1
position: 156199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136288-139536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130698-130859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123948-128941:-1:exon

LUZP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LUZP1
product: leucine zipper protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_035345441.1
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(123948..128941,130698..130859,136288..139536,147932..148070))
location: region:123948-148070:-1
so has part: feature:147932-148070:-1:exon
so has part: feature:136288-139536:-1:exon
so has part: feature:130698-130859:-1:exon
so has part: feature:123948-128941:-1:exon

position:148070:-1
position: 148070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147932-148070:-1:exon

position:147932:-1
position: 147932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136288-139536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130698-130859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123948-128941:-1:exon

LUZP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 1
translation: MAEFTGYKETSNRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLADIEALRKRVLKIEGKDEEIKKAEELCRLMKEKLQEEESLTRELKSEIEHLQRRMAELEKLEEAFGRSKNDCTQLCLSLNEEKNLTKKISTELEVLRVKVKELEASEDRLDKTEQSLTDELEKLKSLALTFISERKHFNEREKQNEKIIQELTQKLEQNNKLNRADQTRNASNLLERSSNNLLDRNDLRIEDDLTSALPSKETRRKGSVDYLKHVENETRNKSENQKNKNHEDNKVKDLTQEIEKLKTQIKHFESLEEELKKVRAKNNDLQDSYLSEQNKNKLLTGQLEEIKMQIKKQKDLENGEVENEDTSFSSRGKHDRPKYRGVATDLTATRHKPREVSPQQRRERVKNRDFSFSNDSYSHGGKQVPSPSLMNRKAGKASSVDATATDMKRLEEKSSVSTFSCGQKEASIMQNEGKRSKEQPSVLSRYPPAAHEQKSWKTPSKPVGDTGLRSKAEKPSQTLRGNCQTSTDIRDDKLSKGELVTSLPEKLKISQAEVSDILGDTLLPRGNYSSSNGMASAYRYHLSSHTLASDCIGTKTETMNSFAASHKQPLEGRAKKAIIYQEREFTDMSLENAKPSLTKRSHHSRSQEDVLQIFTGPDKEDTDQSSPSATDHVNAGLKTDSETIQSSHDKRNSDEETGRSKKTYTQSDFETRKKANSKQFSNSRGVFRASLFENDKNTVHDEDSTKCIKPSDASNGGFKSRRSFSPREALRSKAIIKPAIVEKDMKAVMGGTTSEAESEKQKSSFKMVTNKMTSSITIFPSEPTAPRLSADIAAKEKHVTTSNVRVALNEPSPITNNLSQPFEVSVNRSALKLSEADRIGETGLRGRTETVVSRSSIVIKTTELSEKNSELPSETISSKSHGSSDAVSSETKHVTLRSSWRTRQGLHSVEDSQIKVEKNVASSTTNKCTSSVDLSETEGNSARTNSLEQTSARTSVTANSWNAPELGSRRTKSNLSASELLTRRSYTSDPTVACTWHQITLPDENKDVPSSRRKQFGSSEYLSQADTPGKRPATKLELQDADSNPYPPLSLQSEEQGASRAYRTTSRR
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(128903..128941,130698..130859,136288..139431))
location: region:128903-139431:-1
so has part: feature:136288-139431:-1:exon
so has part: feature:130698-130859:-1:exon
so has part: feature:128903-128941:-1:exon

XP_035201331.1
type: Protein
SIO_000068: ncbiprotein

position:128903:-1
position: 128903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139431:-1
position: 139431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136288-139431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130698-130859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128903-128941:-1:exon

LUZP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 1
translation: MAEFTGYKETSNRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLADIEALRKRVLKIEGKDEEIKKAEELCRLMKEKLQEEESLTRELKSEIEHLQRRMAELEKLEEAFGRSKNDCTQLCLSLNEEKNLTKKISTELEVLRVKVKELEASEDRLDKTEQSLTDELEKLKSLALTFISERKHFNEREKQNEKIIQELTQKLEQNNKLNRADQTRNASNLLERSSNNLLDRNDLRIEDDLTSALPSKETRRKGSVDYLKHVENETRNKSENQKNKNHEDNKVKDLTQEIEKLKTQIKHFESLEEELKKVRAKNNDLQDSYLSEQNKNKLLTGQLEEIKMQIKKQKDLENGEVENEDTSFSSRGKHDRPKYRGVATDLTATRHKPREVSPQQRRERVKNRDFSFSNDSYSHGGKQVPSPSLMNRKAGKASSVDATATDMKRLEEKSSVSTFSCGQKEASIMQNEGKRSKEQPSVLSRYPPAAHEQKSWKTPSKPVGDTGLRSKAEKPSQTLRGNCQTSTDIRDDKLSKGELVTSLPEKLKISQAEVSDILGDTLLPRGNYSSSNGMASAYRYHLSSHTLASDCIGTKTETMNSFAASHKQPLEGRAKKAIIYQEREFTDMSLENAKPSLTKRSHHSRSQEDVLQIFTGPDKEDTDQSSPSATDHVNAGLKTDSETIQSSHDKRNSDEETGRSKKTYTQSDFETRKKANSKQFSNSRGVFRASLFENDKNTVHDEDSTKCIKPSDASNGGFKSRRSFSPREALRSKAIIKPAIVEKDMKAVMGGTTSEAESEKQKSSFKMVTNKMTSSITIFPSEPTAPRLSADIAAKEKHVTTSNVRVALNEPSPITNNLSQPFEVSVNRSALKLSEADRIGETGLRGRTETVVSRSSIVIKTTELSEKNSELPSETISSKSHGSSDAVSSETKHVTLRSSWRTRQGLHSVEDSQIKVEKNVASSTTNKCTSSVDLSETEGNSARTNSLEQTSARTSVTANSWNAPELGSRRTKSNLSASELLTRRSYTSDPTVACTWHQITLPDENKDVPSSRRKQFGSSEYLSQADTPGKRPATKLELQDADSNPYPPLSLQSEEQGASRAYRTTSRR
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(128903..128941,130698..130859,136288..139431))
location: region:128903-139431:-1
so has part: feature:136288-139431:-1:exon
so has part: feature:130698-130859:-1:exon
so has part: feature:128903-128941:-1:exon

XP_035201332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136288-139431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130698-130859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128903-128941:-1:exon

LUZP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 1
translation: MAEFTGYKETSNRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLADIEALRKRVLKIEGKDEEIKKAEELCRLMKEKLQEEESLTRELKSEIEHLQRRMAELEKLEEAFGRSKNDCTQLCLSLNEEKNLTKKISTELEVLRVKVKELEASEDRLDKTEQSLTDELEKLKSLALTFISERKHFNEREKQNEKIIQELTQKLEQNNKLNRADQTRNASNLLERSSNNLLDRNDLRIEDDLTSALPSKETRRKGSVDYLKHVENETRNKSENQKNKNHEDNKVKDLTQEIEKLKTQIKHFESLEEELKKVRAKNNDLQDSYLSEQNKNKLLTGQLEEIKMQIKKQKDLENGEVENEDTSFSSRGKHDRPKYRGVATDLTATRHKPREVSPQQRRERVKNRDFSFSNDSYSHGGKQVPSPSLMNRKAGKASSVDATATDMKRLEEKSSVSTFSCGQKEASIMQNEGKRSKEQPSVLSRYPPAAHEQKSWKTPSKPVGDTGLRSKAEKPSQTLRGNCQTSTDIRDDKLSKGELVTSLPEKLKISQAEVSDILGDTLLPRGNYSSSNGMASAYRYHLSSHTLASDCIGTKTETMNSFAASHKQPLEGRAKKAIIYQEREFTDMSLENAKPSLTKRSHHSRSQEDVLQIFTGPDKEDTDQSSPSATDHVNAGLKTDSETIQSSHDKRNSDEETGRSKKTYTQSDFETRKKANSKQFSNSRGVFRASLFENDKNTVHDEDSTKCIKPSDASNGGFKSRRSFSPREALRSKAIIKPAIVEKDMKAVMGGTTSEAESEKQKSSFKMVTNKMTSSITIFPSEPTAPRLSADIAAKEKHVTTSNVRVALNEPSPITNNLSQPFEVSVNRSALKLSEADRIGETGLRGRTETVVSRSSIVIKTTELSEKNSELPSETISSKSHGSSDAVSSETKHVTLRSSWRTRQGLHSVEDSQIKVEKNVASSTTNKCTSSVDLSETEGNSARTNSLEQTSARTSVTANSWNAPELGSRRTKSNLSASELLTRRSYTSDPTVACTWHQITLPDENKDVPSSRRKQFGSSEYLSQADTPGKRPATKLELQDADSNPYPPLSLQSEEQGASRAYRTTSRR
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(128903..128941,130698..130859,136288..139431))
location: region:128903-139431:-1
so has part: feature:136288-139431:-1:exon
so has part: feature:130698-130859:-1:exon
so has part: feature:128903-128941:-1:exon

XP_035201333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136288-139431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130698-130859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128903-128941:-1:exon

LUZP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 1
translation: MAEFTGYKETSNRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLADIEALRKRVLKIEGKDEEIKKAEELCRLMKEKLQEEESLTRELKSEIEHLQRRMAELEKLEEAFGRSKNDCTQLCLSLNEEKNLTKKISTELEVLRVKVKELEASEDRLDKTEQSLTDELEKLKSLALTFISERKHFNEREKQNEKIIQELTQKLEQNNKLNRADQTRNASNLLERSSNNLLDRNDLRIEDDLTSALPSKETRRKGSVDYLKHVENETRNKSENQKNKNHEDNKVKDLTQEIEKLKTQIKHFESLEEELKKVRAKNNDLQDSYLSEQNKNKLLTGQLEEIKMQIKKQKDLENGEVENEDTSFSSRGKHDRPKYRGVATDLTATRHKPREVSPQQRRERVKNRDFSFSNDSYSHGGKQVPSPSLMNRKAGKASSVDATATDMKRLEEKSSVSTFSCGQKEASIMQNEGKRSKEQPSVLSRYPPAAHEQKSWKTPSKPVGDTGLRSKAEKPSQTLRGNCQTSTDIRDDKLSKGELVTSLPEKLKISQAEVSDILGDTLLPRGNYSSSNGMASAYRYHLSSHTLASDCIGTKTETMNSFAASHKQPLEGRAKKAIIYQEREFTDMSLENAKPSLTKRSHHSRSQEDVLQIFTGPDKEDTDQSSPSATDHVNAGLKTDSETIQSSHDKRNSDEETGRSKKTYTQSDFETRKKANSKQFSNSRGVFRASLFENDKNTVHDEDSTKCIKPSDASNGGFKSRRSFSPREALRSKAIIKPAIVEKDMKAVMGGTTSEAESEKQKSSFKMVTNKMTSSITIFPSEPTAPRLSADIAAKEKHVTTSNVRVALNEPSPITNNLSQPFEVSVNRSALKLSEADRIGETGLRGRTETVVSRSSIVIKTTELSEKNSELPSETISSKSHGSSDAVSSETKHVTLRSSWRTRQGLHSVEDSQIKVEKNVASSTTNKCTSSVDLSETEGNSARTNSLEQTSARTSVTANSWNAPELGSRRTKSNLSASELLTRRSYTSDPTVACTWHQITLPDENKDVPSSRRKQFGSSEYLSQADTPGKRPATKLELQDADSNPYPPLSLQSEEQGASRAYRTTSRR
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(128903..128941,130698..130859,136288..139431))
location: region:128903-139431:-1
so has part: feature:136288-139431:-1:exon
so has part: feature:130698-130859:-1:exon
so has part: feature:128903-128941:-1:exon

XP_035201334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136288-139431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130698-130859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128903-128941:-1:exon

HNRNPR
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: HNRNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(188127..216068)
location: region:188127-216068:-1
so has part: feature:188127-216068:-1:exon
subclass of: SO_0000010

118177807
type: Gene
SIO_000068: ncbigene

position:188127:-1
position: 188127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216068:-1
position: 216068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188127-216068:-1:exon

HNRNPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HNRNPR
product: heterogeneous nuclear ribonucleoprotein R, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035345844.1
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(188127..190292,190484..190605,192755..192904,193567..193772,194891..195026,196722..196898,205999..206112,206794..206901,207313..207431,215913..216068))
location: region:188127-216068:-1
so has part: feature:215913-216068:-1:exon
so has part: feature:207313-207431:-1:exon
so has part: feature:206794-206901:-1:exon
so has part: feature:205999-206112:-1:exon
so has part: feature:196722-196898:-1:exon
so has part: feature:194891-195026:-1:exon
so has part: feature:193567-193772:-1:exon
so has part: feature:192755-192904:-1:exon
so has part: feature:190484-190605:-1:exon
so has part: feature:188127-190292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215913-216068:-1:exon

position:215913:-1
position: 215913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207313-207431:-1:exon

position:207313:-1
position: 207313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207431:-1
position: 207431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206794-206901:-1:exon

position:206794:-1
position: 206794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206901:-1
position: 206901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:205999-206112:-1:exon

position:205999:-1
position: 205999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206112:-1
position: 206112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196722-196898:-1:exon

position:196722:-1
position: 196722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196898:-1
position: 196898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194891-195026:-1:exon

position:194891:-1
position: 194891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195026:-1
position: 195026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:193567-193772:-1:exon

position:193567:-1
position: 193567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193772:-1
position: 193772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:192755-192904:-1:exon

position:192755:-1
position: 192755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192904:-1
position: 192904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:190484-190605:-1:exon

position:190484:-1
position: 190484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190605:-1
position: 190605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:188127-190292:-1:exon

position:190292:-1
position: 190292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HNRNPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HNRNPR
product: heterogeneous nuclear ribonucleoprotein R, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035345842.1
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(188127..190292,190484..190605,192755..192904,193567..193772,194891..195026,196722..196898,205999..206112,206794..206901,207313..207431,209670..209835,215913..216068))
location: region:188127-216068:-1
so has part: feature:215913-216068:-1:exon
so has part: feature:209670-209835:-1:exon
so has part: feature:207313-207431:-1:exon
so has part: feature:206794-206901:-1:exon
so has part: feature:205999-206112:-1:exon
so has part: feature:196722-196898:-1:exon
so has part: feature:194891-195026:-1:exon
so has part: feature:193567-193772:-1:exon
so has part: feature:192755-192904:-1:exon
so has part: feature:190484-190605:-1:exon
so has part: feature:188127-190292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215913-216068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209670-209835:-1:exon

position:209670:-1
position: 209670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209835:-1
position: 209835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207313-207431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206794-206901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205999-206112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196722-196898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194891-195026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193567-193772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192755-192904:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190484-190605:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188127-190292:-1:exon

HNRNPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HNRNPR
product: heterogeneous nuclear ribonucleoprotein R, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035345841.1
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(188127..190292,190484..190605,192755..192904,193567..193772,194891..195026,196722..196898,205999..206112,206794..206901,207313..207431,209670..209838,215913..216066))
location: region:188127-216066:-1
so has part: feature:215913-216066:-1:exon
so has part: feature:209670-209838:-1:exon
so has part: feature:207313-207431:-1:exon
so has part: feature:206794-206901:-1:exon
so has part: feature:205999-206112:-1:exon
so has part: feature:196722-196898:-1:exon
so has part: feature:194891-195026:-1:exon
so has part: feature:193567-193772:-1:exon
so has part: feature:192755-192904:-1:exon
so has part: feature:190484-190605:-1:exon
so has part: feature:188127-190292:-1:exon

position:216066:-1
position: 216066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215913-216066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209670-209838:-1:exon

position:209838:-1
position: 209838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207313-207431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206794-206901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205999-206112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196722-196898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194891-195026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193567-193772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192755-192904:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190484-190605:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188127-190292:-1:exon

HNRNPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HNRNPR
product: heterogeneous nuclear ribonucleoprotein R, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035345843.1
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(188127..190292,190484..190605,192755..192904,193567..193772,194891..195026,196722..196898,205999..206112,206794..206901,215913..216058))
location: region:188127-216058:-1
so has part: feature:215913-216058:-1:exon
so has part: feature:206794-206901:-1:exon
so has part: feature:205999-206112:-1:exon
so has part: feature:196722-196898:-1:exon
so has part: feature:194891-195026:-1:exon
so has part: feature:193567-193772:-1:exon
so has part: feature:192755-192904:-1:exon
so has part: feature:190484-190605:-1:exon
so has part: feature:188127-190292:-1:exon

position:216058:-1
position: 216058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215913-216058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206794-206901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205999-206112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196722-196898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194891-195026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193567-193772:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192755-192904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190484-190605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188127-190292:-1:exon

HNRNPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HNRNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein R isoform X3
translation: MRRRRSARHLPSLLGPELRRAGPAPNKSAFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDTVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCSKDAAQEAVKLCDNYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMNEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYYPPPRMPPPIRGRGRGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAIRGRGGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPMGPPRGARGGRGGPAQQQRGRGARGARGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYAGNYGYNNDNQEFYQDTYGQQWK
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(189680..190292,190484..190605,192755..192904,193567..193772,194891..195026,196722..196898,205999..206112,206794..206901,215913..215987))
location: region:189680-215987:-1
so has part: feature:215913-215987:-1:exon
so has part: feature:206794-206901:-1:exon
so has part: feature:205999-206112:-1:exon
so has part: feature:196722-196898:-1:exon
so has part: feature:194891-195026:-1:exon
so has part: feature:193567-193772:-1:exon
so has part: feature:192755-192904:-1:exon
so has part: feature:190484-190605:-1:exon
so has part: feature:189680-190292:-1:exon

XP_035201734.1
type: Protein
SIO_000068: ncbiprotein

position:189680:-1
position: 189680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215987:-1
position: 215987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215913-215987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206794-206901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205999-206112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196722-196898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194891-195026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193567-193772:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192755-192904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190484-190605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189680-190292:-1:exon

HNRNPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HNRNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein R isoform X2
translation: MRRRRSARHLPSLLGPELRRAGPAPHNKMANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDTVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCSKDAAQEAVKLCDNYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMNEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYYPPPRMPPPIRGRGRGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAIRGRGGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPMGPPRGARGGRGGPAQQQRGRGARGARGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYAGNYGYNNDNQEFYQDTYGQQWK
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(189680..190292,190484..190605,192755..192904,193567..193772,194891..195026,196722..196898,205999..206112,206794..206901,207313..207431,209670..209835,215913..215987))
location: region:189680-215987:-1
so has part: feature:215913-215987:-1:exon
so has part: feature:209670-209835:-1:exon
so has part: feature:207313-207431:-1:exon
so has part: feature:206794-206901:-1:exon
so has part: feature:205999-206112:-1:exon
so has part: feature:196722-196898:-1:exon
so has part: feature:194891-195026:-1:exon
so has part: feature:193567-193772:-1:exon
so has part: feature:192755-192904:-1:exon
so has part: feature:190484-190605:-1:exon
so has part: feature:189680-190292:-1:exon

XP_035201733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215913-215987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209670-209835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207313-207431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206794-206901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205999-206112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196722-196898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194891-195026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193567-193772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192755-192904:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190484-190605:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189680-190292:-1:exon

HNRNPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HNRNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein R isoform X1
translation: MRRRRSARHLPSLLGPELRRAGPAPQHNKMANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDTVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCSKDAAQEAVKLCDNYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMNEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYYPPPRMPPPIRGRGRGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAIRGRGGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPMGPPRGARGGRGGPAQQQRGRGARGARGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYAGNYGYNNDNQEFYQDTYGQQWK
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(189680..190292,190484..190605,192755..192904,193567..193772,194891..195026,196722..196898,205999..206112,206794..206901,207313..207431,209670..209838,215913..215987))
location: region:189680-215987:-1
so has part: feature:215913-215987:-1:exon
so has part: feature:209670-209838:-1:exon
so has part: feature:207313-207431:-1:exon
so has part: feature:206794-206901:-1:exon
so has part: feature:205999-206112:-1:exon
so has part: feature:196722-196898:-1:exon
so has part: feature:194891-195026:-1:exon
so has part: feature:193567-193772:-1:exon
so has part: feature:192755-192904:-1:exon
so has part: feature:190484-190605:-1:exon
so has part: feature:189680-190292:-1:exon

XP_035201732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215913-215987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209670-209838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207313-207431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206794-206901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205999-206112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196722-196898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194891-195026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193567-193772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192755-192904:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190484-190605:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189680-190292:-1:exon

HNRNPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HNRNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein R isoform X4
translation: MKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDTVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCSKDAAQEAVKLCDNYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMNEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYYPPPRMPPPIRGRGRGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAIRGRGGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPMGPPRGARGGRGGPAQQQRGRGARGARGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYAGNYGYNNDNQEFYQDTYGQQWK
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(189680..190292,190484..190605,192755..192904,193567..193772,194891..195026,196722..196898,205999..206112,206794..206874))
location: region:189680-206874:-1
so has part: feature:206794-206874:-1:exon
so has part: feature:205999-206112:-1:exon
so has part: feature:196722-196898:-1:exon
so has part: feature:194891-195026:-1:exon
so has part: feature:193567-193772:-1:exon
so has part: feature:192755-192904:-1:exon
so has part: feature:190484-190605:-1:exon
so has part: feature:189680-190292:-1:exon

XP_035201735.1
type: Protein
SIO_000068: ncbiprotein

position:206874:-1
position: 206874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206794-206874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205999-206112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196722-196898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194891-195026:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193567-193772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192755-192904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190484-190605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189680-190292:-1:exon

DNAJC8
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: DNAJC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 224721..236424
location: region:224721-236424:1
so has part: feature:224721-236424:1:exon
subclass of: SO_0000010

118177809
type: Gene
SIO_000068: ncbigene

position:224721:1
position: 224721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236424:1
position: 236424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224721-236424:1:exon

DNAJC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: DNAJC8
product: DnaJ heat shock protein family (Hsp40) member C8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035345848.1
SIO_010081: DNAJC8
subclass of: SO_0000673
so part of: DNAJC8
location: join(224721..224742,224988..225133,227714..227770,229529..229595,230183..230277,231110..231181,232393..232484,233412..233487,235634..236424)
location: region:224721-236424:1
so has part: feature:224721-224742:1:exon
so has part: feature:224988-225133:1:exon
so has part: feature:227714-227770:1:exon
so has part: feature:229529-229595:1:exon
so has part: feature:230183-230277:1:exon
so has part: feature:231110-231181:1:exon
so has part: feature:232393-232484:1:exon
so has part: feature:233412-233487:1:exon
so has part: feature:235634-236424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224721-224742:1:exon

position:224742:1
position: 224742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224988-225133:1:exon

position:224988:1
position: 224988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225133:1
position: 225133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227714-227770:1:exon

position:227714:1
position: 227714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227770:1
position: 227770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:229529-229595:1:exon

position:229529:1
position: 229529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229595:1
position: 229595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230183-230277:1:exon

position:230183:1
position: 230183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230277:1
position: 230277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:231110-231181:1:exon

position:231110:1
position: 231110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231181:1
position: 231181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:232393-232484:1:exon

position:232393:1
position: 232393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232484:1
position: 232484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:233412-233487:1:exon

position:233412:1
position: 233412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233487:1
position: 233487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:235634-236424:1:exon

position:235634:1
position: 235634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: DNAJC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 8
translation: MMTVLVKSCCDGQLIKVSSALQVKQIEKRDSVLTSKNQIDRLTRPGSSYFNLNPFEVLQMDPEATDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRALDVIQAGKEYVEHTVKEKKKQLKKDGKPPNVEEDDPEVFKQAVYKQTMKLFAELEIKRKEREAKEMHERKRQREEEIEAQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRTFLRPPKVKMEQRE
SIO_010081: DNAJC8
subclass of: SO_0000673
so part of: DNAJC8
location: join(224721..224742,224988..225133,227714..227770,229529..229595,230183..230277,231110..231181,232393..232484,233412..233487,235634..235756)
location: region:224721-235756:1
so has part: feature:224721-224742:1:exon
so has part: feature:224988-225133:1:exon
so has part: feature:227714-227770:1:exon
so has part: feature:229529-229595:1:exon
so has part: feature:230183-230277:1:exon
so has part: feature:231110-231181:1:exon
so has part: feature:232393-232484:1:exon
so has part: feature:233412-233487:1:exon
so has part: feature:235634-235756:1:exon

XP_035201739.1
type: Protein
SIO_000068: ncbiprotein

position:235756:1
position: 235756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224721-224742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224988-225133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227714-227770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229529-229595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230183-230277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231110-231181:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232393-232484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233412-233487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235634-235756:1:exon

PTAFR
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PTAFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 246441..252638
location: region:246441-252638:1
so has part: feature:246441-252638:1:exon
subclass of: SO_0000010

118177610
type: Gene
SIO_000068: ncbigene

position:246441:1
position: 246441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252638:1
position: 252638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246441-252638:1:exon

PTAFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PTAFR
product: platelet activating factor receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_035345459.1
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: join(246441..246650,251000..252638)
location: region:246441-252638:1
so has part: feature:246441-246650:1:exon
so has part: feature:251000-252638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246441-246650:1:exon

position:246650:1
position: 246650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:251000-252638:1:exon

position:251000:1
position: 251000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTAFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PTAFR
product: platelet activating factor receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_035345460.1
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: join(246441..246650,251000..251088,251201..252638)
location: region:246441-252638:1
so has part: feature:246441-246650:1:exon
so has part: feature:251000-251088:1:exon
so has part: feature:251201-252638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246441-246650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251000-251088:1:exon

position:251088:1
position: 251088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251201-252638:1:exon

position:251201:1
position: 251201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTAFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PTAFR
product: platelet activating factor receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035345461.1
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: join(246441..246650,251201..252638)
location: region:246441-252638:1
so has part: feature:246441-246650:1:exon
so has part: feature:251201-252638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246441-246650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251201-252638:1:exon

PTAFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PTAFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor receptor isoform X1
translation: MSGEGKGGAEGSAPPIDSQFRYGLFTVFYSIIFILGFVANCYVLWIFRRIYHTKKLNEIKIFMLNLTIADLLFLITMPLWIIYYHHNGDWFMHKFLCNVAGCLFFVNTYASVAFLMVITYNRYQAVTNPIRAAQFTTRRRGIFLSAAIWIITVGSSLYYAFDDNTNVEKMDSKNYTRCFERYDSTSNVTPVLAIHVIICILFCIIFLFILAWNIVIIRTLFSKSGQQRKSAHVKQRALWMVCTVLVVFIISFVPHHIVDLPWTLTVLEQWQKENRHLRQQLNDAHQVTLCLLSMNCVLDPVIYCFLTKKFQKHVSENLKNMKGSRKCSRQTTDTVIESTIHQEDAIRI
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: 251058..252104
location: region:251058-252104:1
so has part: feature:251058-252104:1:exon

XP_035201350.1
type: Protein
SIO_000068: ncbiprotein

position:251058:1
position: 251058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252104:1
position: 252104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251058-252104:1:exon

PTAFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PTAFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor receptor isoform X2
translation: MLNLTIADLLFLITMPLWIIYYHHNGDWFMHKFLCNVAGCLFFVNTYASVAFLMVITYNRYQAVTNPIRAAQFTTRRRGIFLSAAIWIITVGSSLYYAFDDNTNVEKMDSKNYTRCFERYDSTSNVTPVLAIHVIICILFCIIFLFILAWNIVIIRTLFSKSGQQRKSAHVKQRALWMVCTVLVVFIISFVPHHIVDLPWTLTVLEQWQKENRHLRQQLNDAHQVTLCLLSMNCVLDPVIYCFLTKKFQKHVSENLKNMKGSRKCSRQTTDTVIESTIHQEDAIRI
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: 251244..252104
location: region:251244-252104:1
so has part: feature:251244-252104:1:exon

XP_035201351.1
type: Protein
SIO_000068: ncbiprotein

position:251244:1
position: 251244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251244-252104:1:exon

PTAFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PTAFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor receptor isoform X2
translation: MLNLTIADLLFLITMPLWIIYYHHNGDWFMHKFLCNVAGCLFFVNTYASVAFLMVITYNRYQAVTNPIRAAQFTTRRRGIFLSAAIWIITVGSSLYYAFDDNTNVEKMDSKNYTRCFERYDSTSNVTPVLAIHVIICILFCIIFLFILAWNIVIIRTLFSKSGQQRKSAHVKQRALWMVCTVLVVFIISFVPHHIVDLPWTLTVLEQWQKENRHLRQQLNDAHQVTLCLLSMNCVLDPVIYCFLTKKFQKHVSENLKNMKGSRKCSRQTTDTVIESTIHQEDAIRI
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: 251244..252104
location: region:251244-252104:1
so has part: feature:251244-252104:1:exon

XP_035201352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251244-252104:1:exon

EYA3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255222..302491
location: region:255222-302491:1
so has part: feature:255222-302491:1:exon
subclass of: SO_0000010

118177608
type: Gene
SIO_000068: ncbigene

position:255222:1
position: 255222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302491:1
position: 302491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255222-302491:1:exon

EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_035345449.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(255222..255377,268849..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..302491)
location: region:255222-302491:1
so has part: feature:255222-255377:1:exon
so has part: feature:268849-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274458-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:283150-283287:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:292223-292312:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-302491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255222-255377:1:exon

position:255377:1
position: 255377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268849-268943:1:exon

position:268849:1
position: 268849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268943:1
position: 268943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:271487-271530:1:exon

position:271487:1
position: 271487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271530:1
position: 271530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274458-274540:1:exon

position:274458:1
position: 274458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274540:1
position: 274540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:276366-276432:1:exon

position:276366:1
position: 276366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276432:1
position: 276432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:277208-277350:1:exon

position:277208:1
position: 277208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277350:1
position: 277350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:283150-283287:1:exon

position:283150:1
position: 283150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283287:1
position: 283287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288005-288087:1:exon

position:288005:1
position: 288005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288087:1
position: 288087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:289592-289775:1:exon

position:289592:1
position: 289592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289775:1
position: 289775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:291128-291267:1:exon

position:291128:1
position: 291128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291267:1
position: 291267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:291624-291707:1:exon

position:291624:1
position: 291624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291707:1
position: 291707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:292223-292312:1:exon

position:292223:1
position: 292223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292312:1
position: 292312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:294078-294136:1:exon

position:294078:1
position: 294078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294136:1
position: 294136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:295082-295242:1:exon

position:295082:1
position: 295082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295242:1
position: 295242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:297319-297433:1:exon

position:297319:1
position: 297319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297433:1
position: 297433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:297845-297966:1:exon

position:297845:1
position: 297845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297966:1
position: 297966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:298238-298338:1:exon

position:298238:1
position: 298238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298338:1
position: 298338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:299170-302491:1:exon

position:299170:1
position: 299170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_035345454.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(255222..255377,268849..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..302491)
location: region:255222-302491:1
so has part: feature:255222-255377:1:exon
so has part: feature:268849-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274458-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:283150-283287:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-302491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255222-255377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268849-268943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274458-274540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:283150-283287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299170-302491:1:exon

EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_035345455.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(255222..255377,268849..268943,271487..271530,274458..274540,276366..276432,277208..277350,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..302491)
location: region:255222-302491:1
so has part: feature:255222-255377:1:exon
so has part: feature:268849-268943:1:exon
so has part: feature:271487-271530:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 12
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SIO_000300: 14
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SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:299170-302491:1:exon

EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_035345453.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(255222..255377,268849..268943,271487..271530,274461..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..302491)
location: region:255222-302491:1
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SIO_000300: 4
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position:274461:1
position: 274461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 18
SIO_000628: feature:299170-302491:1:exon

EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_035345456.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(255222..255377,268849..268943,271487..271530,274461..274540,276366..276432,277208..277350,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..302491)
location: region:255222-302491:1
so has part: feature:255222-255377:1:exon
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urn:…
SIO_000300: 1
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SIO_000628: feature:299170-302491:1:exon

EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_035345450.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(255253..255377,266206..266297,268849..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..302491)
location: region:255253-302491:1
so has part: feature:255253-255377:1:exon
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position:255253:1
position: 255253
reference: sequence
type: ForwardStrandPosition
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urn:…
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position:266206:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266297:1
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reference: sequence
type: ForwardStrandPosition
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SIO_000628: feature:299170-302491:1:exon

EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035345452.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(265189..265380,268849..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..302491)
location: region:265189-302491:1
so has part: feature:265189-265380:1:exon
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position:265189:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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position:265380:1
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reference: sequence
type: ForwardStrandPosition
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EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035345451.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(266571..266588,268849..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..302491)
location: region:266571-302491:1
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position:266571:1
position: 266571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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position:266588:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:299170-302491:1:exon

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 3 isoform X1
translation: MEEPQDLPEQPVKKAKMQESREQSLSSHVSNTEVGDQKPESSNLGSNLPMSSEIMTCTDYIPRSSNDYTSQMYSTKPYAHILSVPVSETMSPYPGQTQYQALQQSQPYTIYPQTTQTYGLPPFGALWPGMKPESGLIQTPSTSQHSVLTCTTGLTTSQPSPAHYSYSIEASTTNANPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGAITPADSSAESTTLATTTYPTEKPNAMVPTRTVQRHSSGDASTSPSLSRATASKELDEQARKNIPGKNRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTLVIGSGLSMEEMIFEVADTHLFFNDLEECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNANHSSSVGVQGGVDWMRKLAFRYRRVREIYDKYKTNVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCVNILITTTQLVPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(268911..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..299250)
location: region:268911-299250:1
so has part: feature:268911-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274458-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:283150-283287:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:292223-292312:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-299250:1:exon

XP_035201340.1
type: Protein
SIO_000068: ncbiprotein

position:268911:1
position: 268911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299250:1
position: 299250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268911-268943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274458-274540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283150-283287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292223-292312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299170-299250:1:exon

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 3 isoform X1
translation: MEEPQDLPEQPVKKAKMQESREQSLSSHVSNTEVGDQKPESSNLGSNLPMSSEIMTCTDYIPRSSNDYTSQMYSTKPYAHILSVPVSETMSPYPGQTQYQALQQSQPYTIYPQTTQTYGLPPFGALWPGMKPESGLIQTPSTSQHSVLTCTTGLTTSQPSPAHYSYSIEASTTNANPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGAITPADSSAESTTLATTTYPTEKPNAMVPTRTVQRHSSGDASTSPSLSRATASKELDEQARKNIPGKNRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTLVIGSGLSMEEMIFEVADTHLFFNDLEECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNANHSSSVGVQGGVDWMRKLAFRYRRVREIYDKYKTNVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCVNILITTTQLVPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(268911..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..299250)
location: region:268911-299250:1
so has part: feature:268911-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274458-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:283150-283287:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:292223-292312:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-299250:1:exon

XP_035201341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268911-268943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274458-274540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283150-283287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292223-292312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299170-299250:1:exon

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 3 isoform X1
translation: MEEPQDLPEQPVKKAKMQESREQSLSSHVSNTEVGDQKPESSNLGSNLPMSSEIMTCTDYIPRSSNDYTSQMYSTKPYAHILSVPVSETMSPYPGQTQYQALQQSQPYTIYPQTTQTYGLPPFGALWPGMKPESGLIQTPSTSQHSVLTCTTGLTTSQPSPAHYSYSIEASTTNANPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGAITPADSSAESTTLATTTYPTEKPNAMVPTRTVQRHSSGDASTSPSLSRATASKELDEQARKNIPGKNRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTLVIGSGLSMEEMIFEVADTHLFFNDLEECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNANHSSSVGVQGGVDWMRKLAFRYRRVREIYDKYKTNVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCVNILITTTQLVPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(268911..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..299250)
location: region:268911-299250:1
so has part: feature:268911-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274458-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:283150-283287:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:292223-292312:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-299250:1:exon

XP_035201342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268911-268943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274458-274540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283150-283287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292223-292312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299170-299250:1:exon

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 3 isoform X1
translation: MEEPQDLPEQPVKKAKMQESREQSLSSHVSNTEVGDQKPESSNLGSNLPMSSEIMTCTDYIPRSSNDYTSQMYSTKPYAHILSVPVSETMSPYPGQTQYQALQQSQPYTIYPQTTQTYGLPPFGALWPGMKPESGLIQTPSTSQHSVLTCTTGLTTSQPSPAHYSYSIEASTTNANPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGAITPADSSAESTTLATTTYPTEKPNAMVPTRTVQRHSSGDASTSPSLSRATASKELDEQARKNIPGKNRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTLVIGSGLSMEEMIFEVADTHLFFNDLEECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNANHSSSVGVQGGVDWMRKLAFRYRRVREIYDKYKTNVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCVNILITTTQLVPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(268911..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..299250)
location: region:268911-299250:1
so has part: feature:268911-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274458-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:283150-283287:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:292223-292312:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-299250:1:exon

XP_035201343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268911-268943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274458-274540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283150-283287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292223-292312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299170-299250:1:exon

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 3 isoform X3
translation: MEEPQDLPEQPVKKAKMQESREQSLSSHVSNTEVGDQKPESSNLGSNLPMSSEIMTCTDYIPRSSNDYTSQMYSTKPYAHILSVPVSETMSPYPGQTQYQALQQSQPYTIYPQTTQTYGLPPFGALWPGMKPESGLIQTPSTSQHSVLTCTTGLTTSQPSPAHYSYSIEASTTNANPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGAITPADSSAESTTLATTTYPTEKPNAMVPTRTVQRHSSGDASTSPSLSRATASKELDEQARKNIPGKNRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNANHSSSVGVQGGVDWMRKLAFRYRRVREIYDKYKTNVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCVNILITTTQLVPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(268911..268943,271487..271530,274458..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..299250)
location: region:268911-299250:1
so has part: feature:268911-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274458-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:283150-283287:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-299250:1:exon

XP_035201345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268911-268943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274458-274540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283150-283287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:299170-299250:1:exon

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 3 isoform X4
translation: MEEPQDLPEQPVKKAKMQESREQSLSSHVSNTEVGDQKPESSNLGSNLPMSSEIMTCTDYIPRSSNDYTSQMYSTKPYAHILSVPVSETMSPYPGQTQYQALQQSQPYTIYPQTTQTYGLPPFASTTNANPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGAITPADSSAESTTLATTTYPTEKPNAMVPTRTVQRHSSGDASTSPSLSRATASKELDEQARKNIPGKNRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTLVIGSGLSMEEMIFEVADTHLFFNDLEECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNANHSSSVGVQGGVDWMRKLAFRYRRVREIYDKYKTNVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCVNILITTTQLVPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(268911..268943,271487..271530,274458..274540,276366..276432,277208..277350,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..299250)
location: region:268911-299250:1
so has part: feature:268911-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274458-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:292223-292312:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-299250:1:exon

XP_035201346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268911-268943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274458-274540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292223-292312:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:299170-299250:1:exon

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 3 isoform X2
translation: MEEPQDLPEQPVKKAKMQESREQSLSHVSNTEVGDQKPESSNLGSNLPMSSEIMTCTDYIPRSSNDYTSQMYSTKPYAHILSVPVSETMSPYPGQTQYQALQQSQPYTIYPQTTQTYGLPPFGALWPGMKPESGLIQTPSTSQHSVLTCTTGLTTSQPSPAHYSYSIEASTTNANPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGAITPADSSAESTTLATTTYPTEKPNAMVPTRTVQRHSSGDASTSPSLSRATASKELDEQARKNIPGKNRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTLVIGSGLSMEEMIFEVADTHLFFNDLEECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNANHSSSVGVQGGVDWMRKLAFRYRRVREIYDKYKTNVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCVNILITTTQLVPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(268911..268943,271487..271530,274461..274540,276366..276432,277208..277350,283150..283287,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..299250)
location: region:268911-299250:1
so has part: feature:268911-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274461-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:283150-283287:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:292223-292312:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-299250:1:exon

XP_035201344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268911-268943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274461-274540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283150-283287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292223-292312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299170-299250:1:exon

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eyes absent homolog 3 isoform X5
translation: MEEPQDLPEQPVKKAKMQESREQSLSHVSNTEVGDQKPESSNLGSNLPMSSEIMTCTDYIPRSSNDYTSQMYSTKPYAHILSVPVSETMSPYPGQTQYQALQQSQPYTIYPQTTQTYGLPPFASTTNANPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGAITPADSSAESTTLATTTYPTEKPNAMVPTRTVQRHSSGDASTSPSLSRATASKELDEQARKNIPGKNRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKDPTLVIGSGLSMEEMIFEVADTHLFFNDLEECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNANHSSSVGVQGGVDWMRKLAFRYRRVREIYDKYKTNVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCVNILITTTQLVPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(268911..268943,271487..271530,274461..274540,276366..276432,277208..277350,288005..288087,289592..289775,291128..291267,291624..291707,292223..292312,294078..294136,295082..295242,297319..297433,297845..297966,298238..298338,299170..299250)
location: region:268911-299250:1
so has part: feature:268911-268943:1:exon
so has part: feature:271487-271530:1:exon
so has part: feature:274461-274540:1:exon
so has part: feature:276366-276432:1:exon
so has part: feature:277208-277350:1:exon
so has part: feature:288005-288087:1:exon
so has part: feature:289592-289775:1:exon
so has part: feature:291128-291267:1:exon
so has part: feature:291624-291707:1:exon
so has part: feature:292223-292312:1:exon
so has part: feature:294078-294136:1:exon
so has part: feature:295082-295242:1:exon
so has part: feature:297319-297433:1:exon
so has part: feature:297845-297966:1:exon
so has part: feature:298238-298338:1:exon
so has part: feature:299170-299250:1:exon

XP_035201347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268911-268943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271487-271530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274461-274540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276366-276432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277208-277350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288005-288087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289592-289775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291128-291267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291624-291707:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292223-292312:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:294078-294136:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:295082-295242:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:297319-297433:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:297845-297966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:298238-298338:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:299170-299250:1:exon

XKR8
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: XKR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(303943..307383)
location: region:303943-307383:-1
so has part: feature:303943-307383:-1:exon
subclass of: SO_0000010

118177609
type: Gene
SIO_000068: ncbigene

position:303943:-1
position: 303943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307383:-1
position: 307383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303943-307383:-1:exon

XKR8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: XKR8
product: XK related 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035345457.1
SIO_010081: XKR8
subclass of: SO_0000673
so part of: XKR8
location: complement(join(303943..305029,305904..306100,307091..307383))
location: region:303943-307383:-1
so has part: feature:307091-307383:-1:exon
so has part: feature:305904-306100:-1:exon
so has part: feature:303943-305029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307091-307383:-1:exon

position:307091:-1
position: 307091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305904-306100:-1:exon

position:305904:-1
position: 305904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306100:-1
position: 306100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303943-305029:-1:exon

position:305029:-1
position: 305029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XKR8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: XKR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 8
translation: MAARSPPRFGPLQLLLAAAGAAAAALDVCADAWVAAGYARAGHPGWAALGLVLLAAASAATQACSWLWFRSDPAALRPELPRCLLAALHLLQLGFFYRCLHALKVGWKVCWAKAVSEEEQNRMAFLSHDISMLRLFETFLENTPQLTLLLYVILRTNKAEPSQGLGICTAFLCVTWSLLDYHQSLRSFLQDKYELSLGSSAVYFLWNLSLTCPRILLVALFALLWPYGVAIHFLLVWLAMFLWVSLQGTDFMESPGPEQLYRAIVAVILYFSWFNVAPGRTLYRSIIYHGFILVDSTLLALSWLLCRSPSDEHLYLIPVVSAALPCYLLGLLLRVSYYQWLHPSARAQQQGSYDEVDANRRTDGLEFRTVLEPDLVNRRLQWLAQRQFVVPVLAEQHLLNGAASADAAV
SIO_010081: XKR8
subclass of: SO_0000673
so part of: XKR8
location: complement(join(304290..305029,305904..306100,307091..307383))
location: region:304290-307383:-1
so has part: feature:307091-307383:-1:exon
so has part: feature:305904-306100:-1:exon
so has part: feature:304290-305029:-1:exon

XP_035201348.1
type: Protein
SIO_000068: ncbiprotein

position:304290:-1
position: 304290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307091-307383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305904-306100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304290-305029:-1:exon

RPA2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: RPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <317528..321973
location: region:317528-321973:1
so has part: feature:317528-321973:1:exon
subclass of: SO_0000010

118177810
type: Gene
SIO_000068: ncbigene

position:317528:1
position: 317528
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:321973:1
position: 321973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317528-321973:1:exon

RPA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RPA2
product: replication protein A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035345849.1
SIO_010081: RPA2
subclass of: SO_0000673
so part of: RPA2
location: join(<317528..317686,317785..317886,317998..318111,319043..319117,319754..319867,320189..320299,320474..320568,321339..321973)
location: region:317528-321973:1
so has part: feature:317528-317686:1:exon
so has part: feature:317785-317886:1:exon
so has part: feature:317998-318111:1:exon
so has part: feature:319043-319117:1:exon
so has part: feature:319754-319867:1:exon
so has part: feature:320189-320299:1:exon
so has part: feature:320474-320568:1:exon
so has part: feature:321339-321973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317528-317686:1:exon

position:317686:1
position: 317686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:317785-317886:1:exon

position:317785:1
position: 317785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317886:1
position: 317886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317998-318111:1:exon

position:317998:1
position: 317998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318111:1
position: 318111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:319043-319117:1:exon

position:319043:1
position: 319043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319117:1
position: 319117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:319754-319867:1:exon

position:319754:1
position: 319754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319867:1
position: 319867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:320189-320299:1:exon

position:320189:1
position: 320189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320299:1
position: 320299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:320474-320568:1:exon

position:320474:1
position: 320474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320568:1
position: 320568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:321339-321973:1:exon

position:321339:1
position: 321339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication protein A 32 kDa subunit
translation: RRARRRLTGSPLPSSGNFDGGYGTAGSSGPAGGYAQSPGGFSSPTGTQAEKKQRARSQNIVPCTVSQLLAAEQVDETFRIRDVEITQVTIIGIIRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGGENIVVPPGTYVKVAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILEIVNAHMILRKNLMAASRAPQSFTSAGIGDMGGYGGGGSLPVNGLTAHQSQVLNLIKNCPVPEGMSLQELKLQLHNVSMSTIKQAVEFLSSEGHIYSTVDDDHYKSTDAE
SIO_010081: RPA2
subclass of: SO_0000673
so part of: RPA2
location: join(<317528..317686,317785..317886,317998..318111,319043..319117,319754..319867,320189..320299,320474..320568,321339..321423)
location: region:317528-321423:1
so has part: feature:317528-317686:1:exon
so has part: feature:317785-317886:1:exon
so has part: feature:317998-318111:1:exon
so has part: feature:319043-319117:1:exon
so has part: feature:319754-319867:1:exon
so has part: feature:320189-320299:1:exon
so has part: feature:320474-320568:1:exon
so has part: feature:321339-321423:1:exon

XP_035201740.1
type: Protein
SIO_000068: ncbiprotein

position:321423:1
position: 321423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317528-317686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317785-317886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317998-318111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319043-319117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319754-319867:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320189-320299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320474-320568:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321339-321423:1:exon

THEMIS2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: THEMIS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(323942..329328)
location: region:323942-329328:-1
so has part: feature:323942-329328:-1:exon
subclass of: SO_0000010

118177800
type: Gene
SIO_000068: ncbigene

position:323942:-1
position: 323942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329328:-1
position: 329328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323942-329328:-1:exon

THEMIS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: THEMIS2
product: thymocyte selection associated family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035345838.1
SIO_010081: THEMIS2
subclass of: SO_0000673
so part of: THEMIS2
location: complement(join(323942..324139,325896..327119,327295..327495,327612..327752,329117..329328))
location: region:323942-329328:-1
so has part: feature:329117-329328:-1:exon
so has part: feature:327612-327752:-1:exon
so has part: feature:327295-327495:-1:exon
so has part: feature:325896-327119:-1:exon
so has part: feature:323942-324139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329117-329328:-1:exon

position:329117:-1
position: 329117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327612-327752:-1:exon

position:327612:-1
position: 327612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327752:-1
position: 327752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327295-327495:-1:exon

position:327295:-1
position: 327295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327495:-1
position: 327495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:325896-327119:-1:exon

position:325896:-1
position: 325896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327119:-1
position: 327119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:323942-324139:-1:exon

position:324139:-1
position: 324139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THEMIS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: THEMIS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein THEMIS2 isoform X2
translation: MEPLSFQEYICSLDPTTLPRILRICSGVYFQGSVYEISGNECCLSTGDLLKVTAVTLQKVVCVNVHTGQTTELLPTFKGLFQPAPDLAPCPTPQGPFLGVGRKKGLTLHQALEWRGRQTQPLWCPTIGPHALLLSPVYEVQATMNLRRDEVKIPSTLEVDVEDVTEESQDVHFSRPLLLSEVLGMEEVLPTQAEILEGPHSATIFESAWVPRLRKGQRLQIHSCSHTWRVLASARSGTRRFLLSSAYQGRFRRRPRQFAGVQELAASLQPGQQLHVVVTQDCEGCEDDVPPLSVGDRLEARQLLLAGASTRLLCLRHSEEGEEEEGEKLLLPLDLGGSFVEEACDSKKYRLTELVELLPLPCDVRVVTTDPALERDVLGSFPALRLEARITQPFLVSSFCEEPDKGFEIPPQWLDLSLVLTEEPVHSQAPSTHCSHVEELTEAFYYKLLAQLPGGSAPPPPRPPKPKAASRDVQVQPCPAPEQKDRARSRGKRSLDPSPTTSSQTRLAPPLPPPFVLPQKVKSLTTHRSTPNEYSPRPRLPAAPLSRKAPKDTVALLESTKGS
SIO_010081: THEMIS2
subclass of: SO_0000673
so part of: THEMIS2
location: complement(join(324108..324139,325896..327119,327295..327495,327612..327752,329117..329210))
location: region:324108-329210:-1
so has part: feature:329117-329210:-1:exon
so has part: feature:327612-327752:-1:exon
so has part: feature:327295-327495:-1:exon
so has part: feature:325896-327119:-1:exon
so has part: feature:324108-324139:-1:exon

XP_035201729.1
type: Protein
SIO_000068: ncbiprotein

position:324108:-1
position: 324108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329210:-1
position: 329210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329117-329210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327612-327752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327295-327495:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325896-327119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324108-324139:-1:exon

THEMIS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: THEMIS2
product: thymocyte selection associated family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_035345837.1
SIO_010081: THEMIS2
subclass of: SO_0000673
so part of: THEMIS2
location: complement(join(324888..325338,325896..327119,327295..327495,327612..327752,329117..329328))
location: region:324888-329328:-1
so has part: feature:329117-329328:-1:exon
so has part: feature:327612-327752:-1:exon
so has part: feature:327295-327495:-1:exon
so has part: feature:325896-327119:-1:exon
so has part: feature:324888-325338:-1:exon

position:324888:-1
position: 324888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329117-329328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327612-327752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327295-327495:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325896-327119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324888-325338:-1:exon

position:325338:-1
position: 325338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THEMIS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: THEMIS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein THEMIS2 isoform X1
translation: MEPLSFQEYICSLDPTTLPRILRICSGVYFQGSVYEISGNECCLSTGDLLKVTAVTLQKVVCVNVHTGQTTELLPTFKGLFQPAPDLAPCPTPQGPFLGVGRKKGLTLHQALEWRGRQTQPLWCPTIGPHALLLSPVYEVQATMNLRRDEVKIPSTLEVDVEDVTEESQDVHFSRPLLLSEVLGMEEVLPTQAEILEGPHSATIFESAWVPRLRKGQRLQIHSCSHTWRVLASARSGTRRFLLSSAYQGRFRRRPRQFAGVQELAASLQPGQQLHVVVTQDCEGCEDDVPPLSVGDRLEARQLLLAGASTRLLCLRHSEEGEEEEGEKLLLPLDLGGSFVEEACDSKKYRLTELVELLPLPCDVRVVTTDPALERDVLGSFPALRLEARITQPFLVSSFCEEPDKGFEIPPQWLDLSLVLTEEPVHSQAPSTHCSHVEELTEAFYYKLLAQLPGGSAPPPPRPPKPKAASRDVQVQPCPAPEQKDRARSRGKRSLDPSPTTSSQTRLAPPLPPPFVLPQKVKSLTTHRSTPNEYSPRPRLPAAPLSRKAPKDTDMERSSDEHDYEVIEEDIQKTIHKMQTVFPF
SIO_010081: THEMIS2
subclass of: SO_0000673
so part of: THEMIS2
location: complement(join(325244..325338,325896..327119,327295..327495,327612..327752,329117..329210))
location: region:325244-329210:-1
so has part: feature:329117-329210:-1:exon
so has part: feature:327612-327752:-1:exon
so has part: feature:327295-327495:-1:exon
so has part: feature:325896-327119:-1:exon
so has part: feature:325244-325338:-1:exon

XP_035201728.1
type: Protein
SIO_000068: ncbiprotein

position:325244:-1
position: 325244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329117-329210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327612-327752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327295-327495:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325896-327119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325244-325338:-1:exon

PPP1R8
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PPP1R8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(338192..355272)
location: region:338192-355272:-1
so has part: feature:338192-355272:-1:exon
subclass of: SO_0000010

118177680
type: Gene
SIO_000068: ncbigene

position:338192:-1
position: 338192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355272:-1
position: 355272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338192-355272:-1:exon

PPP1R8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PPP1R8
product: protein phosphatase 1 regulatory subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035345635.1
SIO_010081: PPP1R8
subclass of: SO_0000673
so part of: PPP1R8
location: complement(join(338192..340876,341614..341678,342808..342952,343578..343798,344430..344583,349127..349187,355122..355272))
location: region:338192-355272:-1
so has part: feature:355122-355272:-1:exon
so has part: feature:349127-349187:-1:exon
so has part: feature:344430-344583:-1:exon
so has part: feature:343578-343798:-1:exon
so has part: feature:342808-342952:-1:exon
so has part: feature:341614-341678:-1:exon
so has part: feature:338192-340876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355122-355272:-1:exon

position:355122:-1
position: 355122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:349127-349187:-1:exon

position:349127:-1
position: 349127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349187:-1
position: 349187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344430-344583:-1:exon

position:344430:-1
position: 344430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344583:-1
position: 344583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:343578-343798:-1:exon

position:343578:-1
position: 343578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343798:-1
position: 343798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:342808-342952:-1:exon

position:342808:-1
position: 342808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342952:-1
position: 342952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:341614-341678:-1:exon

position:341614:-1
position: 341614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341678:-1
position: 341678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:338192-340876:-1:exon

position:340876:-1
position: 340876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PPP1R8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear inhibitor of protein phosphatase 1
translation: MAANANSAGGGGLSLFECPSWAGKPPPGLHLDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEAHKPQQIPIDSTVSFGASTRAYTLREKPQTLPSAVKGDEKMGGEDEELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVTFSDDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRLDNPGSLTTDDSASRRMQNFPYSGGLYGGLPPTHNEAGSQSHGVHGTALIGGLPMPYPNLAPDVDLTPVVPSTVNMNPAPNPAVFNPEAVNEPKKKKYAKEAWPGKKPTPSLLI
SIO_010081: PPP1R8
subclass of: SO_0000673
so part of: PPP1R8
location: complement(join(340523..340876,341614..341678,342808..342952,343578..343798,344430..344583,349127..349187,355122..355183))
location: region:340523-355183:-1
so has part: feature:355122-355183:-1:exon
so has part: feature:349127-349187:-1:exon
so has part: feature:344430-344583:-1:exon
so has part: feature:343578-343798:-1:exon
so has part: feature:342808-342952:-1:exon
so has part: feature:341614-341678:-1:exon
so has part: feature:340523-340876:-1:exon

XP_035201526.1
type: Protein
SIO_000068: ncbiprotein

position:340523:-1
position: 340523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355183:-1
position: 355183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355122-355183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349127-349187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344430-344583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343578-343798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342808-342952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341614-341678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340523-340876:-1:exon

LOC118177845
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177845
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(346517..346682)
location: region:346517-346682:-1
so has part: feature:346517-346682:-1:exon
subclass of: SO_0000979

118177845
type: Gene
SIO_000068: ncbigene

position:346517:-1
position: 346517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346682:-1
position: 346682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346517-346682:-1:exon

LOC118177845
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: guide_RNA
gene: LOC118177845
product: small Cajal body-specific RNA 1
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00553
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004755937.1
SIO_010081: LOC118177845
subclass of: SO_0000673
so part of: LOC118177845
location: complement(346517..346682)
location: region:346517-346682:-1
so has part: feature:346517-346682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346517-346682:-1:exon

STX12
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: STX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(356329..369289)
location: region:356329-369289:-1
so has part: feature:356329-369289:-1:exon
subclass of: SO_0000010

118177642
type: Gene
SIO_000068: ncbigene

position:356329:-1
position: 356329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369289:-1
position: 369289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356329-369289:-1:exon

STX12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: STX12
product: syntaxin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035345532.1
SIO_010081: STX12
subclass of: SO_0000673
so part of: STX12
location: complement(join(356329..357758,358729..358811,358981..359053,359528..359633,361397..361440,362300..362437,364292..364391,365418..365487,369087..369289))
location: region:356329-369289:-1
so has part: feature:369087-369289:-1:exon
so has part: feature:365418-365487:-1:exon
so has part: feature:364292-364391:-1:exon
so has part: feature:362300-362437:-1:exon
so has part: feature:361397-361440:-1:exon
so has part: feature:359528-359633:-1:exon
so has part: feature:358981-359053:-1:exon
so has part: feature:358729-358811:-1:exon
so has part: feature:356329-357758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369087-369289:-1:exon

position:369087:-1
position: 369087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:365418-365487:-1:exon

position:365418:-1
position: 365418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365487:-1
position: 365487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:364292-364391:-1:exon

position:364292:-1
position: 364292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364391:-1
position: 364391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:362300-362437:-1:exon

position:362300:-1
position: 362300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362437:-1
position: 362437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:361397-361440:-1:exon

position:361397:-1
position: 361397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361440:-1
position: 361440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:359528-359633:-1:exon

position:359528:-1
position: 359528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359633:-1
position: 359633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:358981-359053:-1:exon

position:358981:-1
position: 358981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359053:-1
position: 359053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:358729-358811:-1:exon

position:358729:-1
position: 358729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358811:-1
position: 358811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:356329-357758:-1:exon

position:357758:-1
position: 357758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STX12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: STX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-12
translation: MSYGPLDPYLPRALPPPRDFGGIIQTCSANVQRIAQYTVQIKNLMSQLGTKQDSSKLQENLQQLQHSANCLAKETNEYLKELGSLPLPLSASEQRQQRLQKERLMNDFSAALNNFQAIQRRVSEKEKETVARARAGSRISADERFREEQLVSFDSGEDWNQMQSQEDDVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDMIDSIEANVESAEVHVERASEQLQRAAYYQKKSRKKICILIVGLAVASIIIGLIIWWTKK
SIO_010081: STX12
subclass of: SO_0000673
so part of: STX12
location: complement(join(357666..357758,358729..358811,358981..359053,359528..359633,361397..361440,362300..362437,364292..364391,365418..365487,369087..369198))
location: region:357666-369198:-1
so has part: feature:369087-369198:-1:exon
so has part: feature:365418-365487:-1:exon
so has part: feature:364292-364391:-1:exon
so has part: feature:362300-362437:-1:exon
so has part: feature:361397-361440:-1:exon
so has part: feature:359528-359633:-1:exon
so has part: feature:358981-359053:-1:exon
so has part: feature:358729-358811:-1:exon
so has part: feature:357666-357758:-1:exon

XP_035201423.1
type: Protein
SIO_000068: ncbiprotein

position:357666:-1
position: 357666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369198:-1
position: 369198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369087-369198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365418-365487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364292-364391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362300-362437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361397-361440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:359528-359633:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:358981-359053:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:358729-358811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357666-357758:-1:exon

CITED4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CITED4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(378451..380669)
location: region:378451-380669:-1
so has part: feature:378451-380669:-1:exon
subclass of: SO_0000010

118177643
type: Gene
SIO_000068: ncbigene

position:378451:-1
position: 378451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380669:-1
position: 380669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378451-380669:-1:exon

CITED4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CITED4
product: Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035345533.1
SIO_010081: CITED4
subclass of: SO_0000673
so part of: CITED4
location: complement(join(378451..380328,380544..380669))
location: region:378451-380669:-1
so has part: feature:380544-380669:-1:exon
so has part: feature:378451-380328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380544-380669:-1:exon

position:380544:-1
position: 380544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378451-380328:-1:exon

position:380328:-1
position: 380328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CITED4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CITED4
product: Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_035345534.1
SIO_010081: CITED4
subclass of: SO_0000673
so part of: CITED4
location: complement(join(378451..380328,380540..380600))
location: region:378451-380600:-1
so has part: feature:380540-380600:-1:exon
so has part: feature:378451-380328:-1:exon

position:380600:-1
position: 380600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380540-380600:-1:exon

position:380540:-1
position: 380540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378451-380328:-1:exon

CITED4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CITED4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cbp/p300-interacting transactivator 4
translation: MAEHMMMSVSHGGAGLQSYRMGVSGLQAPPQHGQHVLRTLPAAGQMMPYGGAGMDGAMRPRPNLSGQMSHHQMQNAMMFNGPSQQQQYMGPVGTQQLMASMHLQKLNTQYQGHPLGMSNGPMGAGAQQYRVGPSQHPGMQHMPSPALTLNVMDTDLIDEEVLTSLVLELGLDRIQELPELFLGQNEFDFISDFVSKQQPSAISC
SIO_010081: CITED4
subclass of: SO_0000673
so part of: CITED4
location: complement(379702..380316)
location: region:379702-380316:-1
so has part: feature:379702-380316:-1:exon

XP_035201424.1
type: Protein
SIO_000068: ncbiprotein

position:379702:-1
position: 379702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380316:-1
position: 380316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379702-380316:-1:exon

CITED4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CITED4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cbp/p300-interacting transactivator 4
translation: MAEHMMMSVSHGGAGLQSYRMGVSGLQAPPQHGQHVLRTLPAAGQMMPYGGAGMDGAMRPRPNLSGQMSHHQMQNAMMFNGPSQQQQYMGPVGTQQLMASMHLQKLNTQYQGHPLGMSNGPMGAGAQQYRVGPSQHPGMQHMPSPALTLNVMDTDLIDEEVLTSLVLELGLDRIQELPELFLGQNEFDFISDFVSKQQPSAISC
SIO_010081: CITED4
subclass of: SO_0000673
so part of: CITED4
location: complement(379702..380316)
location: region:379702-380316:-1
so has part: feature:379702-380316:-1:exon

XP_035201425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379702-380316:-1:exon

LOC118177621
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(472633..499937)
location: region:472633-499937:-1
so has part: feature:472633-499937:-1:exon
subclass of: SO_0000011

118177621
type: Gene
SIO_000068: ncbigene

position:472633:-1
position: 472633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499937:-1
position: 499937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472633-499937:-1:exon

LOC118177621
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177621
product: uncharacterized LOC118177621
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004755879.1
SIO_010081: LOC118177621
subclass of: SO_0000673
so part of: LOC118177621
location: complement(join(472633..472643,483337..483343,495325..495331,499610..499937))
location: region:472633-499937:-1
so has part: feature:499610-499937:-1:exon
so has part: feature:495325-495331:-1:exon
so has part: feature:483337-483343:-1:exon
so has part: feature:472633-472643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499610-499937:-1:exon

position:499610:-1
position: 499610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:495325-495331:-1:exon

position:495325:-1
position: 495325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495331:-1
position: 495331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:483337-483343:-1:exon

position:483337:-1
position: 483337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483343:-1
position: 483343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:472633-472643:-1:exon

position:472643:-1
position: 472643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTPS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CTPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 514670..531994
location: region:514670-531994:1
so has part: feature:514670-531994:1:exon
subclass of: SO_0000010

118177620
type: Gene
SIO_000068: ncbigene

position:514670:1
position: 514670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531994:1
position: 531994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514670-531994:1:exon

CTPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CTPS1
product: CTP synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_035345490.1
SIO_010081: CTPS1
subclass of: SO_0000673
so part of: CTPS1
location: join(514670..514855,515195..515372,515726..515896,516662..516762,517973..518089,519444..519527,519772..519852,520630..520781,522052..522184,523033..523121,524577..524671,525256..525318,526130..526173,527128..527224,527500..527555,527640..527736,528045..528189,529245..529335,530326..531994)
location: region:514670-531994:1
so has part: feature:514670-514855:1:exon
so has part: feature:515195-515372:1:exon
so has part: feature:515726-515896:1:exon
so has part: feature:516662-516762:1:exon
so has part: feature:517973-518089:1:exon
so has part: feature:519444-519527:1:exon
so has part: feature:519772-519852:1:exon
so has part: feature:520630-520781:1:exon
so has part: feature:522052-522184:1:exon
so has part: feature:523033-523121:1:exon
so has part: feature:524577-524671:1:exon
so has part: feature:525256-525318:1:exon
so has part: feature:526130-526173:1:exon
so has part: feature:527128-527224:1:exon
so has part: feature:527500-527555:1:exon
so has part: feature:527640-527736:1:exon
so has part: feature:528045-528189:1:exon
so has part: feature:529245-529335:1:exon
so has part: feature:530326-531994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514670-514855:1:exon

position:514855:1
position: 514855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515195-515372:1:exon

position:515195:1
position: 515195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515372:1
position: 515372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:515726-515896:1:exon

position:515726:1
position: 515726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515896:1
position: 515896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:516662-516762:1:exon

position:516662:1
position: 516662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516762:1
position: 516762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:517973-518089:1:exon

position:517973:1
position: 517973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518089:1
position: 518089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519444-519527:1:exon

position:519444:1
position: 519444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519527:1
position: 519527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:519772-519852:1:exon

position:519772:1
position: 519772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519852:1
position: 519852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:520630-520781:1:exon

position:520630:1
position: 520630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520781:1
position: 520781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:522052-522184:1:exon

position:522052:1
position: 522052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522184:1
position: 522184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:523033-523121:1:exon

position:523033:1
position: 523033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523121:1
position: 523121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:524577-524671:1:exon

position:524577:1
position: 524577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524671:1
position: 524671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:525256-525318:1:exon

position:525256:1
position: 525256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525318:1
position: 525318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:526130-526173:1:exon

position:526130:1
position: 526130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526173:1
position: 526173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:527128-527224:1:exon

position:527128:1
position: 527128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527224:1
position: 527224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:527500-527555:1:exon

position:527500:1
position: 527500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527555:1
position: 527555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:527640-527736:1:exon

position:527640:1
position: 527640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527736:1
position: 527736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:528045-528189:1:exon

position:528045:1
position: 528045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528189:1
position: 528189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:529245-529335:1:exon

position:529245:1
position: 529245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529335:1
position: 529335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:530326-531994:1:exon

position:530326:1
position: 530326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CTPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTP synthase 1
translation: MKYILVTGGVISGIGKGIIASSIGTILKSSGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQARIPVDEDGIEPQVCVIELGGTVGDIESMPFIEAFRQFQFKARRENFCNIHVSLVPQPTSTGEQKTKPTQNSVRELRGLGLSPDLIVCRCSTPLDTSVKEKISMFCHVEPEQVICVHDVSSIYRVPLLLEEQGVVDYFRHRLDLPIGRQPRRMLMKWKEMADRYDRLLETCSIALVGKYTKFSDSYASVIKALEHSALAINHKLDIKYIDSADLEPATLQEEPVRYHEAWQKLCGAHGVLVPGGFGVRGTEGKIQAISWARKQKKPFLGVCLGMQLAVVEFARSVLGWQDANSTEFDPKTTHPVVIDMPEHNPGQMGGTMRLGKRRTLFQTKNSIMRKLYGDHDFLEERHRHRFEVNPELKNCFEEQGLKFVGQDEEGERMEVVELEEHPFFVGVQYHPEFLSRPIKPSPPYFGLLLASAGRLAHYLQKGCRLSPRDTYSDRSGSSSPDSEITELKFPSFNHD
SIO_010081: CTPS1
subclass of: SO_0000673
so part of: CTPS1
location: join(515207..515372,515726..515896,516662..516762,517973..518089,519444..519527,519772..519852,520630..520781,522052..522184,523033..523121,524577..524671,525256..525318,526130..526173,527128..527224,527500..527555,527640..527736,528045..528189,529245..529329)
location: region:515207-529329:1
so has part: feature:515207-515372:1:exon
so has part: feature:515726-515896:1:exon
so has part: feature:516662-516762:1:exon
so has part: feature:517973-518089:1:exon
so has part: feature:519444-519527:1:exon
so has part: feature:519772-519852:1:exon
so has part: feature:520630-520781:1:exon
so has part: feature:522052-522184:1:exon
so has part: feature:523033-523121:1:exon
so has part: feature:524577-524671:1:exon
so has part: feature:525256-525318:1:exon
so has part: feature:526130-526173:1:exon
so has part: feature:527128-527224:1:exon
so has part: feature:527500-527555:1:exon
so has part: feature:527640-527736:1:exon
so has part: feature:528045-528189:1:exon
so has part: feature:529245-529329:1:exon

XP_035201381.1
type: Protein
SIO_000068: ncbiprotein

position:515207:1
position: 515207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529329:1
position: 529329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515207-515372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515726-515896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516662-516762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517973-518089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519444-519527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519772-519852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520630-520781:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522052-522184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:523033-523121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524577-524671:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525256-525318:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526130-526173:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527128-527224:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527500-527555:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:527640-527736:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528045-528189:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529245-529329:1:exon

SCMH1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(533426..593352)
location: region:533426-593352:-1
so has part: feature:533426-593352:-1:exon
subclass of: SO_0000010

118177618
type: Gene
SIO_000068: ncbigene

position:533426:-1
position: 533426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593352:-1
position: 593352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533426-593352:-1:exon

SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_035345484.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(533426..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..576043,585884..585886,593341..593352))
location: region:533426-593352:-1
so has part: feature:593341-593352:-1:exon
so has part: feature:585884-585886:-1:exon
so has part: feature:575959-576043:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:541415-541546:-1:exon
so has part: feature:536826-537029:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:533426-534408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593341-593352:-1:exon

position:593341:-1
position: 593341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585884-585886:-1:exon

position:585884:-1
position: 585884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585886:-1
position: 585886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:575959-576043:-1:exon

position:575959:-1
position: 575959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576043:-1
position: 576043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:573162-573230:-1:exon

position:573162:-1
position: 573162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573230:-1
position: 573230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:567779-567849:-1:exon

position:567779:-1
position: 567779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567849:-1
position: 567849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566982-567216:-1:exon

position:566982:-1
position: 566982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567216:-1
position: 567216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:563661-563749:-1:exon

position:563661:-1
position: 563661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563749:-1
position: 563749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:562466-562709:-1:exon

position:562466:-1
position: 562466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562709:-1
position: 562709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:548036-548268:-1:exon

position:548036:-1
position: 548036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548268:-1
position: 548268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:547351-547477:-1:exon

position:547351:-1
position: 547351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547477:-1
position: 547477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:546109-546309:-1:exon

position:546109:-1
position: 546109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546309:-1
position: 546309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:545236-545421:-1:exon

position:545236:-1
position: 545236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545421:-1
position: 545421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
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position:541546:-1
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urn:…
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urn:…
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position:534408:-1
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SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_035345482.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(533426..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..576043,578644..578705,585884..585886,593341..593352))
location: region:533426-593352:-1
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urn:…
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SIO_000300: 17
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SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035345485.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(533426..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..576043,590896..590957))
location: region:533426-590957:-1
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position:590957:-1
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reference: sequence
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urn:…
SIO_000300: 1
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position:590896:-1
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reference: sequence
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urn:…
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SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_035345483.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(533426..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..576043,578644..578705,590896..590919))
location: region:533426-590919:-1
so has part: feature:590896-590919:-1:exon
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position:590919:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
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SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_035345489.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(533426..534408,535560..535702,536826..537029,541415..541546,545236..545421,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..576043,578644..579035))
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position:579035:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578644-579035:-1:exon

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SIO_000300: 2
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SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_035345481.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(533426..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..576043,578644..579023))
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position:579023:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
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SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_035345486.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
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position:579021:-1
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reference: sequence
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urn:…
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SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_035345487.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(533426..534408,535560..535702,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..576043,578644..579021))
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 14
SIO_000628: feature:533426-534408:-1:exon

SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_035345488.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(533426..534408,535560..535702,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..576043,578644..579010))
location: region:533426-579010:-1
so has part: feature:578644-579010:-1:exon
so has part: feature:575959-576043:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:533426-534408:-1:exon

position:579010:-1
position: 579010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578644-579010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575959-576043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:533426-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X5
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPDRSSSLDGTLQGPGRGTKRYSQDSPPYSAPLSPKLPKNDRHPLEGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDYRLQGYRHLHQPSSLTQGSTSALRRLSSGGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,536826..537029,541415..541546,545236..545421,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:541415-541546:-1:exon
so has part: feature:536826-537029:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201380.1
type: Protein
SIO_000068: ncbiprotein

position:534283:-1
position: 534283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575983:-1
position: 575983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541415-541546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536826-537029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534283-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X4
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMPTPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534283-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X2
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMPTPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDYRLQGYRHLHQPSSLTQGSTSALRRLSSGGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,536826..537029,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:536826-537029:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:536826-537029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:534283-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X3
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMPTPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPDRSSSLDGTLQGPGRGTKRYSQDSPPYSAPLSPKLPKNDRHPLEGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:541415-541546:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:541415-541546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:534283-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X1
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMPTPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPDRSSSLDGTLQGPGRGTKRYSQDSPPYSAPLSPKLPKNDRHPLEGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDYRLQGYRHLHQPSSLTQGSTSALRRLSSGGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:541415-541546:-1:exon
so has part: feature:536826-537029:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:541415-541546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:536826-537029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534283-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X1
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMPTPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPDRSSSLDGTLQGPGRGTKRYSQDSPPYSAPLSPKLPKNDRHPLEGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDYRLQGYRHLHQPSSLTQGSTSALRRLSSGGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:541415-541546:-1:exon
so has part: feature:536826-537029:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:541415-541546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:536826-537029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534283-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X1
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMPTPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPDRSSSLDGTLQGPGRGTKRYSQDSPPYSAPLSPKLPKNDRHPLEGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDYRLQGYRHLHQPSSLTQGSTSALRRLSSGGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:541415-541546:-1:exon
so has part: feature:536826-537029:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:541415-541546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:536826-537029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534283-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X1
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMPTPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPDRSSSLDGTLQGPGRGTKRYSQDSPPYSAPLSPKLPKNDRHPLEGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDYRLQGYRHLHQPSSLTQGSTSALRRLSSGGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:541415-541546:-1:exon
so has part: feature:536826-537029:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:541415-541546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:536826-537029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534283-534408:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X1
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKVVIPKSPLPASEVNSEKPSMHSSTKTVLGHQQGQRRRKTGKKRGRTTKALIHHPMPTPSKSVEPLKFPRKRGPKPGSKRKPRTLLNPAPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQNSHMQRSHEYDHDRYLPDRSSSLDGTLQGPGRGTKRYSQDSPPYSAPLSPKLPKNDRHPLEGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDYRLQGYRHLHQPSSLTQGSTSALRRLSSGGSDRYLGSRDVSRLNSRDPSSWTVEEVMQFIREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(534283..534408,535560..535702,536826..537029,541415..541546,545236..545421,546109..546309,547351..547477,548036..548268,562466..562709,563661..563749,566982..567216,567779..567849,573162..573230,575959..575983))
location: region:534283-575983:-1
so has part: feature:575959-575983:-1:exon
so has part: feature:573162-573230:-1:exon
so has part: feature:567779-567849:-1:exon
so has part: feature:566982-567216:-1:exon
so has part: feature:563661-563749:-1:exon
so has part: feature:562466-562709:-1:exon
so has part: feature:548036-548268:-1:exon
so has part: feature:547351-547477:-1:exon
so has part: feature:546109-546309:-1:exon
so has part: feature:545236-545421:-1:exon
so has part: feature:541415-541546:-1:exon
so has part: feature:536826-537029:-1:exon
so has part: feature:535560-535702:-1:exon
so has part: feature:534283-534408:-1:exon

XP_035201376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575959-575983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573162-573230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567779-567849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566982-567216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563661-563749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562466-562709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548036-548268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547351-547477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546109-546309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545236-545421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:541415-541546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:536826-537029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535560-535702:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534283-534408:-1:exon

FOXO6
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: FOXO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 667693..698267
location: region:667693-698267:1
so has part: feature:667693-698267:1:exon
subclass of: SO_0000010

118177708
type: Gene
SIO_000068: ncbigene

position:667693:1
position: 667693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698267:1
position: 698267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667693-698267:1:exon

FOXO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: FOXO6
product: forkhead box O6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035345694.1
SIO_010081: FOXO6
subclass of: SO_0000673
so part of: FOXO6
location: join(667693..667700,670263..670717,693755..698267)
location: region:667693-698267:1
so has part: feature:667693-667700:1:exon
so has part: feature:670263-670717:1:exon
so has part: feature:693755-698267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667693-667700:1:exon

position:667700:1
position: 667700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:670263-670717:1:exon

position:670263:1
position: 670263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670717:1
position: 670717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693755-698267:1:exon

position:693755:1
position: 693755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: FOXO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein O6
translation: MEEKLQAHQVEIDPDFEPQSRPRSCTWPLPHPDFAAEDEDGGAAGPPPALAAGGAEGTENAAAAPAERRAAAAAAPPPPGADVGQLRKAKTSRRNAWGNLSYADLITKAIESSPEKRLTLSQIYDWMVRYVPYFKDKGDSNSSAGWKNSIRHNLSLHTRFIRVQNEGTGKSSWWMLNPEGGKTGKTPRRRAVSMDNNSKFLRIKGKASKKKQLQVTQERGEDSPSAQQAKWSESPASHASDEYDAWADFRTRANSSASTLSGRLSPIMSNHEPDELEEDDGTPSSPLMYPSPSSTMSPSLSARCSVELPRLTDLTGTISLNESLGESLLEDLQDGYSMSPSQQLPPAALRQRSSSFTFNSKCSSMGAATNTYCGTIYSQPAMSLMRRLPMQTIQENKQATFSPVSSYRNASLQDLLSSISYTHKESMVPGDLPMPQAGPMVPARGHRQTPLLCSGGEQGLSSYPAHSASLMKSSALYHPSPASHHPAVNTSALANPVSLMSLPSDTCSMTAMPHHGHLHSYATNQGAHMSLLDSLQGPYPGAVHPPVLGQDRFPADLDLDMFNGSLECDVESIILNDFMDSDEMDFNFDSALPPQNALNVPALPGGPQPTNQSWVPG
SIO_010081: FOXO6
subclass of: SO_0000673
so part of: FOXO6
location: join(670277..670717,693755..695167)
location: region:670277-695167:1
so has part: feature:670277-670717:1:exon
so has part: feature:693755-695167:1:exon

XP_035201585.1
type: Protein
SIO_000068: ncbiprotein

position:670277:1
position: 670277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695167:1
position: 695167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670277-670717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693755-695167:1:exon

LOC118177715
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 934322..936092
location: region:934322-936092:1
so has part: feature:934322-936092:1:exon
subclass of: SO_0000011

118177715
type: Gene
SIO_000068: ncbigene

position:934322:1
position: 934322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936092:1
position: 936092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934322-936092:1:exon

LOC118177715
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177715
product: uncharacterized LOC118177715
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004755898.1
SIO_010081: LOC118177715
subclass of: SO_0000673
so part of: LOC118177715
location: join(934322..934415,935651..936092)
location: region:934322-936092:1
so has part: feature:934322-934415:1:exon
so has part: feature:935651-936092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934322-934415:1:exon

position:934415:1
position: 934415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:935651-936092:1:exon

position:935651:1
position: 935651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EDN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: EDN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(953789..959454)
location: region:953789-959454:-1
so has part: feature:953789-959454:-1:exon
subclass of: SO_0000010

118177791
type: Gene
SIO_000068: ncbigene

position:953789:-1
position: 953789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959454:-1
position: 959454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953789-959454:-1:exon

EDN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EDN2
product: endothelin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_035345828.1
SIO_010081: EDN2
subclass of: SO_0000673
so part of: EDN2
location: complement(join(953789..955956,956679..956783,957535..957654,958829..958973,959225..959454))
location: region:953789-959454:-1
so has part: feature:959225-959454:-1:exon
so has part: feature:958829-958973:-1:exon
so has part: feature:957535-957654:-1:exon
so has part: feature:956679-956783:-1:exon
so has part: feature:953789-955956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959225-959454:-1:exon

position:959225:-1
position: 959225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:958829-958973:-1:exon

position:958829:-1
position: 958829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958973:-1
position: 958973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957535-957654:-1:exon

position:957535:-1
position: 957535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957654:-1
position: 957654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:956679-956783:-1:exon

position:956679:-1
position: 956679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956783:-1
position: 956783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:953789-955956:-1:exon

position:955956:-1
position: 955956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EDN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelin-2
translation: MPSHPAGAVLLALTLCILLEDGMGQPPLESHLAAAGAAHLRTKRCSCNSWLDKECIYFCHLDIIWVNTPGHTAPYGLGSPPRRRKRSLSRCECSHSRDSICTNFCQPKPGYRQSLKLPASSGASMKAPQGDDRKPSPHGLLRALRDLAVSSLQFSKQQRYSQRNAQPTVLPWKKSIWKKKR
SIO_010081: EDN2
subclass of: SO_0000673
so part of: EDN2
location: complement(join(955845..955956,956679..956783,957535..957654,958829..958973,959225..959288))
location: region:955845-959288:-1
so has part: feature:959225-959288:-1:exon
so has part: feature:958829-958973:-1:exon
so has part: feature:957535-957654:-1:exon
so has part: feature:956679-956783:-1:exon
so has part: feature:955845-955956:-1:exon

XP_035201719.1
type: Protein
SIO_000068: ncbiprotein

position:955845:-1
position: 955845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959288:-1
position: 959288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959225-959288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958829-958973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957535-957654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956679-956783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955845-955956:-1:exon

HIVEP3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(990720..1240577)
location: region:990720-1240577:-1
so has part: feature:990720-1240577:-1:exon
subclass of: SO_0000010

118177601
type: Gene
SIO_000068: ncbigene

position:990720:-1
position: 990720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240577:-1
position: 1240577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990720-1240577:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035345429.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215846,1240559..1240577))
location: region:990720-1240577:-1
so has part: feature:1240559-1240577:-1:exon
so has part: feature:1215738-1215846:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240559-1240577:-1:exon

position:1240559:-1
position: 1240559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1215738-1215846:-1:exon

position:1215738:-1
position: 1215738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215846:-1
position: 1215846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1115734-1115813:-1:exon

position:1115734:-1
position: 1115734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115813:-1
position: 1115813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1079333-1079427:-1:exon

position:1079333:-1
position: 1079333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079427:-1
position: 1079427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1058618-1058682:-1:exon

position:1058618:-1
position: 1058618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058682:-1
position: 1058682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1048512-1054171:-1:exon

position:1048512:-1
position: 1048512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054171:-1
position: 1054171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1044247-1044392:-1:exon

position:1044247:-1
position: 1044247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044392:-1
position: 1044392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1015227-1015402:-1:exon

position:1015227:-1
position: 1015227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015402:-1
position: 1015402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1007466-1007564:-1:exon

position:1007466:-1
position: 1007466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007564:-1
position: 1007564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:999512-1000572:-1:exon

position:999512:-1
position: 999512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000572:-1
position: 1000572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:990720-996961:-1:exon

position:996961:-1
position: 996961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035345422.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215846,1219158..1219353))
location: region:990720-1219353:-1
so has part: feature:1219158-1219353:-1:exon
so has part: feature:1215738-1215846:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

position:1219353:-1
position: 1219353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219158-1219353:-1:exon

position:1219158:-1
position: 1219158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1215738-1215846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035345424.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215846,1219002..1219046,1219158..1219353))
location: region:990720-1219353:-1
so has part: feature:1219158-1219353:-1:exon
so has part: feature:1219002-1219046:-1:exon
so has part: feature:1215738-1215846:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219158-1219353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1219002-1219046:-1:exon

position:1219002:-1
position: 1219002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219046:-1
position: 1219046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1215738-1215846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035345428.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215846,1219148..1219353))
location: region:990720-1219353:-1
so has part: feature:1219148-1219353:-1:exon
so has part: feature:1215738-1215846:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219148-1219353:-1:exon

position:1219148:-1
position: 1219148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1215738-1215846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035345425.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215846,1219002..1219046,1219126..1219353))
location: region:990720-1219353:-1
so has part: feature:1219126-1219353:-1:exon
so has part: feature:1219002-1219046:-1:exon
so has part: feature:1215738-1215846:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219126-1219353:-1:exon

position:1219126:-1
position: 1219126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1219002-1219046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215738-1215846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035345427.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215846,1216969..1217055))
location: region:990720-1217055:-1
so has part: feature:1216969-1217055:-1:exon
so has part: feature:1215738-1215846:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

position:1217055:-1
position: 1217055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1216969-1217055:-1:exon

position:1216969:-1
position: 1216969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1215738-1215846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035345430.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215846,1216275..1216292))
location: region:990720-1216292:-1
so has part: feature:1216275-1216292:-1:exon
so has part: feature:1215738-1215846:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

position:1216292:-1
position: 1216292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1216275-1216292:-1:exon

position:1216275:-1
position: 1216275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1215738-1215846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035345426.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215846,1215986..1216260))
location: region:990720-1216260:-1
so has part: feature:1215986-1216260:-1:exon
so has part: feature:1215738-1215846:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

position:1216260:-1
position: 1216260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215986-1216260:-1:exon

position:1215986:-1
position: 1215986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1215738-1215846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_035345432.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1115734..1115813,1215738..1215952))
location: region:990720-1215952:-1
so has part: feature:1215738-1215952:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

position:1215952:-1
position: 1215952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215738-1215952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035345433.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1097071..1097995))
location: region:990720-1097995:-1
so has part: feature:1097071-1097995:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

position:1097995:-1
position: 1097995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1097071-1097995:-1:exon

position:1097071:-1
position: 1097071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_035345431.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1097071..1097995))
location: region:990720-1097995:-1
so has part: feature:1097071-1097995:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1097071-1097995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035345436.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(990720..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1071305..1071947))
location: region:990720-1071947:-1
so has part: feature:1071305-1071947:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:990720-996961:-1:exon

position:1071947:-1
position: 1071947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071305-1071947:-1:exon

position:1071305:-1
position: 1071305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:990720-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201313.1
type: Protein
SIO_000068: ncbiprotein

position:996068:-1
position: 996068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053629:-1
position: 1053629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X1
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996068..996961,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:996068-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:996068-996961:-1:exon

XP_035201327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:996068-996961:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_035345437.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(996825..996961,997498..997562,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215952))
location: region:996825-1215952:-1
so has part: feature:1215738-1215952:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:997498-997562:-1:exon
so has part: feature:996825-996961:-1:exon

position:996825:-1
position: 996825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215738-1215952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:997498-997562:-1:exon

position:997498:-1
position: 997498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997562:-1
position: 997562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:996825-996961:-1:exon

HIVEP3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004755872.1
SIO_010081: HIVEP3
so part of: HIVEP3
location: complement(join(996885..996961,997498..997562,998640..998893,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215952))
location: region:996885-1215952:-1
so has part: feature:1215738-1215952:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:998640-998893:-1:exon
so has part: feature:997498-997562:-1:exon
so has part: feature:996885-996961:-1:exon

position:996885:-1
position: 996885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215738-1215952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:998640-998893:-1:exon

position:998640:-1
position: 998640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998893:-1
position: 998893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:997498-997562:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:996885-996961:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X2
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(997545..997562,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:997545-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:997545-997562:-1:exon

XP_035201328.1
type: Protein
SIO_000068: ncbiprotein

position:997545:-1
position: 997545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997545-997562:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HIVEP3
product: HIVEP zinc finger 3, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035345438.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(997569..998893,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1054171,1058618..1058682,1079333..1079427,1115734..1115813,1215738..1215952))
location: region:997569-1215952:-1
so has part: feature:1215738-1215952:-1:exon
so has part: feature:1115734-1115813:-1:exon
so has part: feature:1079333-1079427:-1:exon
so has part: feature:1058618-1058682:-1:exon
so has part: feature:1048512-1054171:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:997569-998893:-1:exon

position:997569:-1
position: 997569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215738-1215952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115734-1115813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1079333-1079427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058618-1058682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1048512-1054171:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:997569-998893:-1:exon

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3 isoform X3
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQASISSAATYQGSSAPSQGTPLRDIIPQQHFSGSLPIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHTLSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSPIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHPAELSPRQKHTLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHTLSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAMLSTNTTQGFPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVVDPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEDPPAFEMSDTPSSSTGPGAQFTNPASSDAALNLTRESIKSPADPGKSAPSDVSASFHSRNTKPASGTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEGEDKPLSQYSSQPATQHSRPPHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSISHGSSHSVSFDREDHSKTESTSQPPESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSTSSAPQERRKCFLVRQASLTRHPEHDPDSAPAGRPETEDPIPSSSKSPVTSLPPQPVSSSPLPSHSTYPSDKSQPKDSPQPAYTQPYTEALQVFHPVPQLTLHEKQYMSPQVSIFPYQHLLPQPAQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLQQTLIHPGQLHIAPPLMSHPAEVPFRQHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGETGGHLPQIKSSLFPAAGTSSLSPCTEYGSDSRLHPLTRTTSPSVSVSTSQLVVPARSDPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSSIVLPKFDDRQPKGTLVCSADVHGLGFDLAQMITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLTESQGRVEVETPPGLSLEQSEPKEIPSTLQQAVSHSGSPSFEALEEYKQPAGKQFLSKAPLQTVKKEDSKELVEQSPPTPPSPAPLSEVAHSAMKSREGTDMKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSRETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKSEEETLVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEEDEDEEEEESQDEPPLKLPEGKHTGPPMHSLGGSPSSQEEGTETALSLAQETVSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEQLASAERESVTRPQMSLA…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(998885..998893,999512..1000572,1007466..1007564,1015227..1015402,1044247..1044392,1048512..1053629))
location: region:998885-1053629:-1
so has part: feature:1048512-1053629:-1:exon
so has part: feature:1044247-1044392:-1:exon
so has part: feature:1015227-1015402:-1:exon
so has part: feature:1007466-1007564:-1:exon
so has part: feature:999512-1000572:-1:exon
so has part: feature:998885-998893:-1:exon

XP_035201329.1
type: Protein
SIO_000068: ncbiprotein

position:998885:-1
position: 998885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048512-1053629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044247-1044392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015227-1015402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007466-1007564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999512-1000572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:998885-998893:-1:exon

SERINC2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SERINC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1312662..1320350)
location: region:1312662-1320350:-1
so has part: feature:1312662-1320350:-1:exon
subclass of: SO_0000010

118177644
type: Gene
SIO_000068: ncbigene

position:1312662:-1
position: 1312662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320350:-1
position: 1320350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312662-1320350:-1:exon

SERINC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SERINC2
product: serine incorporator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_035345535.1
SIO_010081: SERINC2
subclass of: SO_0000673
so part of: SERINC2
location: complement(join(1312662..1313319,1313708..1313920,1314119..1314254,1314351..1314441,1314531..1314700,1314823..1314960,1315117..1315196,1315619..1315806,1316244..1316405,1320268..1320350))
location: region:1312662-1320350:-1
so has part: feature:1320268-1320350:-1:exon
so has part: feature:1316244-1316405:-1:exon
so has part: feature:1315619-1315806:-1:exon
so has part: feature:1315117-1315196:-1:exon
so has part: feature:1314823-1314960:-1:exon
so has part: feature:1314531-1314700:-1:exon
so has part: feature:1314351-1314441:-1:exon
so has part: feature:1314119-1314254:-1:exon
so has part: feature:1313708-1313920:-1:exon
so has part: feature:1312662-1313319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1320268-1320350:-1:exon

position:1320268:-1
position: 1320268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1316244-1316405:-1:exon

position:1316244:-1
position: 1316244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316405:-1
position: 1316405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1315619-1315806:-1:exon

position:1315619:-1
position: 1315619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315806:-1
position: 1315806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1315117-1315196:-1:exon

position:1315117:-1
position: 1315117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315196:-1
position: 1315196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1314823-1314960:-1:exon

position:1314823:-1
position: 1314823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314960:-1
position: 1314960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1314531-1314700:-1:exon

position:1314531:-1
position: 1314531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314700:-1
position: 1314700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1314351-1314441:-1:exon

position:1314351:-1
position: 1314351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314441:-1
position: 1314441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1314119-1314254:-1:exon

position:1314119:-1
position: 1314119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314254:-1
position: 1314254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1313708-1313920:-1:exon

position:1313708:-1
position: 1313708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313920:-1
position: 1313920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1312662-1313319:-1:exon

position:1313319:-1
position: 1313319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERINC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SERINC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine incorporator 2
translation: MGACLGVCSVLSCVSCLCGPASCLLCGCCPSARNSTVSRLLFTFFLFLCTLVSIIMIIPGVEKELHKLPGFCEGSGSVLGVQVHADCSGFLGHKAVYRMGFAAASFFFLFAVLMVCVRSSKDPRAAVQNGFWLLKFMVLVGLTVGAFYIPDGSFTSVWFYFGVVGSFLFILIQLILLIDFAHSWSQLWLRNAGEGSAKGWYAALCAVTFILYAASIAAIALLYVYYTKPQGCTEGKVLISINLILCVIVSAMSILPKIQDAQPHSGLLQASLITLYTVFITWSALANVPNQDCNPTLLLRNSTGLAPAAQPLTTWWDAPSIVGLVIFILCTLFISIRSSDHTQVNKMMLTEESGAGASAGDAAAESGLHHAYDNEQDGVTYSYSFFHLCLLLAALYIMMTLTNWYRPDDSLRVLSSPWTAVWVKICSSWAGLLLYAWTLVAPLVLPDRDFS
SIO_010081: SERINC2
subclass of: SO_0000673
so part of: SERINC2
location: complement(join(1313181..1313319,1313708..1313920,1314119..1314254,1314351..1314441,1314531..1314700,1314823..1314960,1315117..1315196,1315619..1315806,1316244..1316405,1320268..1320306))
location: region:1313181-1320306:-1
so has part: feature:1320268-1320306:-1:exon
so has part: feature:1316244-1316405:-1:exon
so has part: feature:1315619-1315806:-1:exon
so has part: feature:1315117-1315196:-1:exon
so has part: feature:1314823-1314960:-1:exon
so has part: feature:1314531-1314700:-1:exon
so has part: feature:1314351-1314441:-1:exon
so has part: feature:1314119-1314254:-1:exon
so has part: feature:1313708-1313920:-1:exon
so has part: feature:1313181-1313319:-1:exon

XP_035201426.1
type: Protein
SIO_000068: ncbiprotein

position:1313181:-1
position: 1313181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320306:-1
position: 1320306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320268-1320306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316244-1316405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315619-1315806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315117-1315196:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1314823-1314960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1314531-1314700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1314351-1314441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1314119-1314254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313708-1313920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1313181-1313319:-1:exon

LOC118177811
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1322410..1337585
location: region:1322410-1337585:1
so has part: feature:1322410-1337585:1:exon
subclass of: SO_0000010

118177811
type: Gene
SIO_000068: ncbigene

position:1322410:1
position: 1322410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337585:1
position: 1337585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322410-1337585:1:exon

LOC118177811
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118177811
product: protein vestigial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035345850.1
SIO_010081: LOC118177811
subclass of: SO_0000673
so part of: LOC118177811
location: join(1322410..1322524,1328381..1328635,1328767..1328832,1335638..1335728,1336492..1336620,1336827..1336978,1337058..1337585)
location: region:1322410-1337585:1
so has part: feature:1322410-1322524:1:exon
so has part: feature:1328381-1328635:1:exon
so has part: feature:1328767-1328832:1:exon
so has part: feature:1335638-1335728:1:exon
so has part: feature:1336492-1336620:1:exon
so has part: feature:1336827-1336978:1:exon
so has part: feature:1337058-1337585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1322410-1322524:1:exon

position:1322524:1
position: 1322524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1328381-1328635:1:exon

position:1328381:1
position: 1328381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328635:1
position: 1328635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1328767-1328832:1:exon

position:1328767:1
position: 1328767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328832:1
position: 1328832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1335638-1335728:1:exon

position:1335638:1
position: 1335638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335728:1
position: 1335728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1336492-1336620:1:exon

position:1336492:1
position: 1336492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336620:1
position: 1336620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1336827-1336978:1:exon

position:1336827:1
position: 1336827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336978:1
position: 1336978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1337058-1337585:1:exon

position:1337058:1
position: 1337058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177811
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118177811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein vestigial-like
translation: MPMPSGSCGSAPGTHNSGAGTNLAAPAHFQAPNAGSAEGGGGGGDPRHCAGGSAPCAPGGGAGPPLGTRHRHRHQHRHRHRHQYRHRHRHRYPHRHQDQDPRRYRHQHQNQSCHQHQHRHQYPPSPPVSTRQHQYQHRRRILHGPARAGVTSPACSRGRGDRDSPSAPEPLRGGQRLEPGGDPSHSPHPRTSPGSRRPGSRAAPRAPRRRSRARLEGTRASMTEVEPVLDFASSGRTGRRNALPDILGSPAGVSPSDLPLKLAEMSLSAGSSQEMQSPSTEVPPPQPQSPELKDTS
SIO_010081: LOC118177811
subclass of: SO_0000673
so part of: LOC118177811
location: join(1322410..1322524,1328381..1328635,1328767..1328832,1335638..1335728,1336492..1336620,1336827..1336978,1337058..1337140)
location: region:1322410-1337140:1
so has part: feature:1322410-1322524:1:exon
so has part: feature:1328381-1328635:1:exon
so has part: feature:1328767-1328832:1:exon
so has part: feature:1335638-1335728:1:exon
so has part: feature:1336492-1336620:1:exon
so has part: feature:1336827-1336978:1:exon
so has part: feature:1337058-1337140:1:exon

XP_035201741.1
type: Protein
SIO_000068: ncbiprotein

position:1337140:1
position: 1337140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322410-1322524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1328381-1328635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1328767-1328832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335638-1335728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1336492-1336620:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1336827-1336978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1337058-1337140:1:exon

FABP3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: FABP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1339682..1343091
location: region:1339682-1343091:1
so has part: feature:1339682-1343091:1:exon
subclass of: SO_0000010

118177647
type: Gene
SIO_000068: ncbigene

position:1339682:1
position: 1339682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343091:1
position: 1343091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339682-1343091:1:exon

FABP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: FABP3
product: fatty acid binding protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035345540.1
SIO_010081: FABP3
subclass of: SO_0000673
so part of: FABP3
location: join(1339682..1339849,1340543..1340715,1342595..1342696,1342799..1343091)
location: region:1339682-1343091:1
so has part: feature:1339682-1339849:1:exon
so has part: feature:1340543-1340715:1:exon
so has part: feature:1342595-1342696:1:exon
so has part: feature:1342799-1343091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339682-1339849:1:exon

position:1339849:1
position: 1339849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1340543-1340715:1:exon

position:1340543:1
position: 1340543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340715:1
position: 1340715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1342595-1342696:1:exon

position:1342595:1
position: 1342595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342696:1
position: 1342696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1342799-1343091:1:exon

position:1342799:1
position: 1342799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FABP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: FABP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein, heart
translation: MVEAFVGTWKLVDTANFDEYMKALGVGFATRQMAGLTKPTTIIEVAGDKVTVKTQSTFKNTEISFKLGEEFDETTADDRHVKSVVTLDGGKLVHVQKWEGKETSLVRELKDGKLILTLTMGSVVSTRTYEKAT
SIO_010081: FABP3
subclass of: SO_0000673
so part of: FABP3
location: join(1339777..1339849,1340543..1340715,1342595..1342696,1342799..1342852)
location: region:1339777-1342852:1
so has part: feature:1339777-1339849:1:exon
so has part: feature:1340543-1340715:1:exon
so has part: feature:1342595-1342696:1:exon
so has part: feature:1342799-1342852:1:exon

XP_035201431.1
type: Protein
SIO_000068: ncbiprotein

position:1339777:1
position: 1339777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342852:1
position: 1342852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339777-1339849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1340543-1340715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1342595-1342696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1342799-1342852:1:exon

ZCCHC17
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1344221..1358874)
location: region:1344221-1358874:-1
so has part: feature:1344221-1358874:-1:exon
subclass of: SO_0000010

118177646
type: Gene
SIO_000068: ncbigene

position:1344221:-1
position: 1344221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358874:-1
position: 1358874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344221-1358874:-1:exon

ZCCHC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ZCCHC17
product: zinc finger CCHC-type containing 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035345537.1
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1344221..1345117,1353656..1353804,1354959..1355059,1355247..1355338,1356524..1356624,1357632..1357689,1358762..1358874))
location: region:1344221-1358874:-1
so has part: feature:1358762-1358874:-1:exon
so has part: feature:1357632-1357689:-1:exon
so has part: feature:1356524-1356624:-1:exon
so has part: feature:1355247-1355338:-1:exon
so has part: feature:1354959-1355059:-1:exon
so has part: feature:1353656-1353804:-1:exon
so has part: feature:1344221-1345117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1358762-1358874:-1:exon

position:1358762:-1
position: 1358762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1357632-1357689:-1:exon

position:1357632:-1
position: 1357632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357689:-1
position: 1357689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1356524-1356624:-1:exon

position:1356524:-1
position: 1356524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356624:-1
position: 1356624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1355247-1355338:-1:exon

position:1355247:-1
position: 1355247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355338:-1
position: 1355338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1354959-1355059:-1:exon

position:1354959:-1
position: 1354959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355059:-1
position: 1355059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1353656-1353804:-1:exon

position:1353656:-1
position: 1353656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353804:-1
position: 1353804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1344221-1345117:-1:exon

position:1345117:-1
position: 1345117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZCCHC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ZCCHC17
product: zinc finger CCHC-type containing 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_035345538.1
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1344221..1345117,1353656..1353804,1354959..1355059,1355247..1355338,1356524..1356624,1357632..1357689,1358784..1358857))
location: region:1344221-1358857:-1
so has part: feature:1358784-1358857:-1:exon
so has part: feature:1357632-1357689:-1:exon
so has part: feature:1356524-1356624:-1:exon
so has part: feature:1355247-1355338:-1:exon
so has part: feature:1354959-1355059:-1:exon
so has part: feature:1353656-1353804:-1:exon
so has part: feature:1344221-1345117:-1:exon

position:1358857:-1
position: 1358857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358784-1358857:-1:exon

position:1358784:-1
position: 1358784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1357632-1357689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1356524-1356624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355247-1355338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1354959-1355059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1353656-1353804:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1344221-1345117:-1:exon

ZCCHC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein of 40 kDa isoform X1
translation: MEALPELYAIFQGEVASVTEYGAFIKIPGCRKQGLVHKTHMSSCRVDKPSEMVDVGDKVWVKLIGKEMKDDKLKLSLSMKVVNQGTGKDLDPNNVALDQDERKKRMFRDYTSQKITLEAVLNTVCKKCGCKGHFAKECFMQPGGTKYSLIPEEEEEEVTAAECERHKKSSLTDDSSKKRKKEKKKKKKHKSKQSSESDSDSSDSDSDGAQPASKRAKHSGKASKTQKKKKKKHKKKTKE
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1344941..1345117,1353656..1353804,1354959..1355059,1355247..1355338,1356524..1356624,1357632..1357689,1358762..1358803))
location: region:1344941-1358803:-1
so has part: feature:1358762-1358803:-1:exon
so has part: feature:1357632-1357689:-1:exon
so has part: feature:1356524-1356624:-1:exon
so has part: feature:1355247-1355338:-1:exon
so has part: feature:1354959-1355059:-1:exon
so has part: feature:1353656-1353804:-1:exon
so has part: feature:1344941-1345117:-1:exon

XP_035201428.1
type: Protein
SIO_000068: ncbiprotein

position:1344941:-1
position: 1344941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358803:-1
position: 1358803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358762-1358803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1357632-1357689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1356524-1356624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355247-1355338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1354959-1355059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1353656-1353804:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1344941-1345117:-1:exon

ZCCHC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein of 40 kDa isoform X2
translation: MSSCRVDKPSEMVDVGDKVWVKLIGKEMKDDKLKLSLSMKVVNQGTGKDLDPNNVALDQDERKKRMFRDYTSQKITLEAVLNTVCKKCGCKGHFAKECFMQPGGTKYSLIPEEEEEEVTAAECERHKKSSLTDDSSKKRKKEKKKKKKHKSKQSSESDSDSSDSDSDGAQPASKRAKHSGKASKTQKKKKKKHKKKTKE
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1344941..1345117,1353656..1353804,1354959..1355059,1355247..1355338,1356524..1356604))
location: region:1344941-1356604:-1
so has part: feature:1356524-1356604:-1:exon
so has part: feature:1355247-1355338:-1:exon
so has part: feature:1354959-1355059:-1:exon
so has part: feature:1353656-1353804:-1:exon
so has part: feature:1344941-1345117:-1:exon

XP_035201429.1
type: Protein
SIO_000068: ncbiprotein

position:1356604:-1
position: 1356604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1356524-1356604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355247-1355338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354959-1355059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353656-1353804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1344941-1345117:-1:exon

SNRNP40
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SNRNP40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1359249..1370879
location: region:1359249-1370879:1
so has part: feature:1359249-1370879:1:exon
subclass of: SO_0000010

118177645
type: Gene
SIO_000068: ncbigene

position:1359249:1
position: 1359249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370879:1
position: 1370879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359249-1370879:1:exon

SNRNP40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SNRNP40
product: small nuclear ribonucleoprotein U5 subunit 40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035345536.1
SIO_010081: SNRNP40
subclass of: SO_0000673
so part of: SNRNP40
location: join(1359249..1359464,1359921..1360050,1360806..1360899,1362164..1362329,1362828..1362950,1363964..1364084,1364820..1364902,1365330..1365391,1368619..1368722,1370438..1370879)
location: region:1359249-1370879:1
so has part: feature:1359249-1359464:1:exon
so has part: feature:1359921-1360050:1:exon
so has part: feature:1360806-1360899:1:exon
so has part: feature:1362164-1362329:1:exon
so has part: feature:1362828-1362950:1:exon
so has part: feature:1363964-1364084:1:exon
so has part: feature:1364820-1364902:1:exon
so has part: feature:1365330-1365391:1:exon
so has part: feature:1368619-1368722:1:exon
so has part: feature:1370438-1370879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1359249-1359464:1:exon

position:1359464:1
position: 1359464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1359921-1360050:1:exon

position:1359921:1
position: 1359921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360050:1
position: 1360050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1360806-1360899:1:exon

position:1360806:1
position: 1360806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360899:1
position: 1360899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1362164-1362329:1:exon

position:1362164:1
position: 1362164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362329:1
position: 1362329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1362828-1362950:1:exon

position:1362828:1
position: 1362828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362950:1
position: 1362950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1363964-1364084:1:exon

position:1363964:1
position: 1363964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364084:1
position: 1364084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1364820-1364902:1:exon

position:1364820:1
position: 1364820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364902:1
position: 1364902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1365330-1365391:1:exon

position:1365330:1
position: 1365330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365391:1
position: 1365391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1368619-1368722:1:exon

position:1368619:1
position: 1368619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368722:1
position: 1368722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1370438-1370879:1:exon

position:1370438:1
position: 1370438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNRNP40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SNRNP40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U5 small nuclear ribonucleoprotein 40 kDa protein
translation: MLEQQKRKGPAPGPPPGPAPGPAPGPGPGPDLPLVPVPAKRPRHEPPAAGGGAGGGGQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPGGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ
SIO_010081: SNRNP40
subclass of: SO_0000673
so part of: SNRNP40
location: join(1359264..1359464,1359921..1360050,1360806..1360899,1362164..1362329,1362828..1362950,1363964..1364084,1364820..1364902,1365330..1365391,1368619..1368722,1370438..1370487)
location: region:1359264-1370487:1
so has part: feature:1359264-1359464:1:exon
so has part: feature:1359921-1360050:1:exon
so has part: feature:1360806-1360899:1:exon
so has part: feature:1362164-1362329:1:exon
so has part: feature:1362828-1362950:1:exon
so has part: feature:1363964-1364084:1:exon
so has part: feature:1364820-1364902:1:exon
so has part: feature:1365330-1365391:1:exon
so has part: feature:1368619-1368722:1:exon
so has part: feature:1370438-1370487:1:exon

XP_035201427.1
type: Protein
SIO_000068: ncbiprotein

position:1359264:1
position: 1359264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370487:1
position: 1370487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359264-1359464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359921-1360050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360806-1360899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1362164-1362329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1362828-1362950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363964-1364084:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364820-1364902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365330-1365391:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368619-1368722:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370438-1370487:1:exon

LOC118177729
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1378355..1379929)
location: region:1378355-1379929:-1
so has part: feature:1378355-1379929:-1:exon
subclass of: SO_0000011

118177729
type: Gene
SIO_000068: ncbigene

position:1378355:-1
position: 1378355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379929:-1
position: 1379929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378355-1379929:-1:exon

LOC118177729
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177729
product: uncharacterized LOC118177729, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004755907.1
SIO_010081: LOC118177729
subclass of: SO_0000673
so part of: LOC118177729
location: complement(join(1378355..1378393,1379776..1379929))
location: region:1378355-1379929:-1
so has part: feature:1379776-1379929:-1:exon
so has part: feature:1378355-1378393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1379776-1379929:-1:exon

position:1379776:-1
position: 1379776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1378355-1378393:-1:exon

position:1378393:-1
position: 1378393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118177729
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177729
product: uncharacterized LOC118177729, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004755906.1
SIO_010081: LOC118177729
subclass of: SO_0000673
so part of: LOC118177729
location: complement(join(1378355..1378393,1378470..1378837))
location: region:1378355-1378837:-1
so has part: feature:1378470-1378837:-1:exon
so has part: feature:1378355-1378393:-1:exon

position:1378837:-1
position: 1378837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378470-1378837:-1:exon

position:1378470:-1
position: 1378470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1378355-1378393:-1:exon

NKAIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: NKAIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1379881..1407088
location: region:1379881-1407088:1
so has part: feature:1379881-1407088:1:exon
subclass of: SO_0000010

118177728
type: Gene
SIO_000068: ncbigene

position:1379881:1
position: 1379881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407088:1
position: 1407088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1379881-1407088:1:exon

NKAIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NKAIN1
product: sodium/potassium transporting ATPase interacting 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_035345712.1
SIO_010081: NKAIN1
subclass of: SO_0000673
so part of: NKAIN1
location: join(1379881..1380031,1399751..1399888,1399992..1400072,1401112..1401309,1401784..1401844,1403926..1404007,1405130..1407088)
location: region:1379881-1407088:1
so has part: feature:1379881-1380031:1:exon
so has part: feature:1399751-1399888:1:exon
so has part: feature:1399992-1400072:1:exon
so has part: feature:1401112-1401309:1:exon
so has part: feature:1401784-1401844:1:exon
so has part: feature:1403926-1404007:1:exon
so has part: feature:1405130-1407088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1379881-1380031:1:exon

position:1380031:1
position: 1380031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1399751-1399888:1:exon

position:1399751:1
position: 1399751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399888:1
position: 1399888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1399992-1400072:1:exon

position:1399992:1
position: 1399992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400072:1
position: 1400072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1401112-1401309:1:exon

position:1401112:1
position: 1401112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401309:1
position: 1401309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1401784-1401844:1:exon

position:1401784:1
position: 1401784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401844:1
position: 1401844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1403926-1404007:1:exon

position:1403926:1
position: 1403926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404007:1
position: 1404007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1405130-1407088:1:exon

position:1405130:1
position: 1405130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKAIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NKAIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1 isoform X1
translation: MGRCNGRCTLVGFCCLQLIAALERQIFDFLGYQWAPILANFLHIMAVILGIFGTIQYRSKYLIMYAVWLVLWVGWNAFIICFYLEVGHLSQDRDFIMTFNTSLHRSWWMENGPGCLVTPVLNSKLAPEDHHVITVSGCLLDYQYIEVVSSAAQIFLALFGFVYACYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTSG
SIO_010081: NKAIN1
subclass of: SO_0000673
so part of: NKAIN1
location: join(1379978..1380031,1399751..1399888,1399992..1400072,1401112..1401309,1401784..1401844,1403926..1404007,1405130..1405139)
location: region:1379978-1405139:1
so has part: feature:1379978-1380031:1:exon
so has part: feature:1399751-1399888:1:exon
so has part: feature:1399992-1400072:1:exon
so has part: feature:1401112-1401309:1:exon
so has part: feature:1401784-1401844:1:exon
so has part: feature:1403926-1404007:1:exon
so has part: feature:1405130-1405139:1:exon

XP_035201603.1
type: Protein
SIO_000068: ncbiprotein

position:1379978:1
position: 1379978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405139:1
position: 1405139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1379978-1380031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1399751-1399888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1399992-1400072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1401112-1401309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1401784-1401844:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1403926-1404007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1405130-1405139:1:exon

LOC118177727
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1385837..1398819
location: region:1385837-1398819:1
so has part: feature:1385837-1398819:1:exon
subclass of: SO_0000010

118177727
type: Gene
SIO_000068: ncbigene

position:1385837:1
position: 1385837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398819:1
position: 1398819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385837-1398819:1:exon

LOC118177727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118177727
product: uncharacterized LOC118177727
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035345710.1
SIO_010081: LOC118177727
subclass of: SO_0000673
so part of: LOC118177727
location: join(1385837..1387571,1398807..1398819)
location: region:1385837-1398819:1
so has part: feature:1385837-1387571:1:exon
so has part: feature:1398807-1398819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1385837-1387571:1:exon

position:1387571:1
position: 1387571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1398807-1398819:1:exon

position:1398807:1
position: 1398807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118177727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118177727
translation: MLGGRTGRDGTAGIFSPCPASDYSFQFSKYVCNSLEKMERKSWHRAARSYLNRTLNPKCFINKINNHSDVAGWEISHIFCISLCGRRRFGGENANCPSACTQAGAVVGTQRSLQRYPKPPSFRGLWVPLGSHTCTFCLIIQDYYIFLAGAWCRGHGDPLWGEVSLCSTRDPMPGAPRDAGLCWGAQHRGDTSRWCRGGFSKQELQERAEGGWILRGECQRCSDAPRNQRGICGVLGWDPTQGHPCAEVLRAVPVTSSPVTGLCPSTLLILTAHPVPHPGRRRSRCGWPGSLSPTGDTTRGRARTKVGVLASCLALRLIALIRAN
SIO_010081: LOC118177727
subclass of: SO_0000673
so part of: LOC118177727
location: 1386382..1387356
location: region:1386382-1387356:1
so has part: feature:1386382-1387356:1:exon

XP_035201601.1
type: Protein
SIO_000068: ncbiprotein

position:1386382:1
position: 1386382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387356:1
position: 1387356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386382-1387356:1:exon

NKAIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NKAIN1
product: sodium/potassium transporting ATPase interacting 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035345713.1
SIO_010081: NKAIN1
subclass of: SO_0000673
so part of: NKAIN1
location: join(1397295..1397436,1399751..1399888,1399992..1400072,1401112..1401309,1401784..1401844,1403926..1404007,1405130..1407088)
location: region:1397295-1407088:1
so has part: feature:1397295-1397436:1:exon
so has part: feature:1399751-1399888:1:exon
so has part: feature:1399992-1400072:1:exon
so has part: feature:1401112-1401309:1:exon
so has part: feature:1401784-1401844:1:exon
so has part: feature:1403926-1404007:1:exon
so has part: feature:1405130-1407088:1:exon

position:1397295:1
position: 1397295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397295-1397436:1:exon

position:1397436:1
position: 1397436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1399751-1399888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1399992-1400072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1401112-1401309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1401784-1401844:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1403926-1404007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1405130-1407088:1:exon

NKAIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NKAIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1 isoform X2
translation: MAVILGIFGTIQYRSKYLIMYAVWLVLWVGWNAFIICFYLEVGHLSQDRDFIMTFNTSLHRSWWMENGPGCLVTPVLNSKLAPEDHHVITVSGCLLDYQYIEVVSSAAQIFLALFGFVYACYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTSG
SIO_010081: NKAIN1
subclass of: SO_0000673
so part of: NKAIN1
location: join(1399829..1399888,1399992..1400072,1401112..1401309,1401784..1401844,1403926..1404007,1405130..1405139)
location: region:1399829-1405139:1
so has part: feature:1399829-1399888:1:exon
so has part: feature:1399992-1400072:1:exon
so has part: feature:1401112-1401309:1:exon
so has part: feature:1401784-1401844:1:exon
so has part: feature:1403926-1404007:1:exon
so has part: feature:1405130-1405139:1:exon

XP_035201604.1
type: Protein
SIO_000068: ncbiprotein

position:1399829:1
position: 1399829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399829-1399888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1399992-1400072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401112-1401309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1401784-1401844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1403926-1404007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1405130-1405139:1:exon

PUM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1417376..1487593
location: region:1417376-1487593:1
so has part: feature:1417376-1487593:1:exon
subclass of: SO_0000010

118177626
type: Gene
SIO_000068: ncbigene

position:1417376:1
position: 1417376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487593:1
position: 1487593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417376-1487593:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035345500.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1487593)
location: region:1417376-1487593:1
so has part: feature:1417376-1417515:1:exon
so has part: feature:1420144-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443753-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456796-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1487593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417376-1417515:1:exon

position:1417515:1
position: 1417515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1420144-1420517:1:exon

position:1420144:1
position: 1420144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420517:1
position: 1420517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1434653-1434721:1:exon

position:1434653:1
position: 1434653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434721:1
position: 1434721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1443753-1443861:1:exon

position:1443753:1
position: 1443753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443861:1
position: 1443861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1446431-1446609:1:exon

position:1446431:1
position: 1446431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446609:1
position: 1446609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1448733-1448899:1:exon

position:1448733:1
position: 1448733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448899:1
position: 1448899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1449864-1450134:1:exon

position:1449864:1
position: 1449864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450134:1
position: 1450134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1455349-1455442:1:exon

position:1455349:1
position: 1455349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455442:1
position: 1455442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1456796-1456912:1:exon

position:1456796:1
position: 1456796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456912:1
position: 1456912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1462037-1462188:1:exon

position:1462037:1
position: 1462037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462188:1
position: 1462188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1465389-1465527:1:exon

position:1465389:1
position: 1465389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465527:1
position: 1465527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1467104-1467247:1:exon

position:1467104:1
position: 1467104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467247:1
position: 1467247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1468198-1468494:1:exon

position:1468198:1
position: 1468198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468494:1
position: 1468494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1470299-1470535:1:exon

position:1470299:1
position: 1470299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470535:1
position: 1470535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1475546-1475813:1:exon

position:1475546:1
position: 1475546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475813:1
position: 1475813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1476310-1476439:1:exon

position:1476310:1
position: 1476310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476439:1
position: 1476439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1477186-1477320:1:exon

position:1477186:1
position: 1477186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477320:1
position: 1477320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1478697-1478834:1:exon

position:1478697:1
position: 1478697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478834:1
position: 1478834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1480506-1480631:1:exon

position:1480506:1
position: 1480506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480631:1
position: 1480631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1481452-1481573:1:exon

position:1481452:1
position: 1481452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481573:1
position: 1481573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1482955-1483147:1:exon

position:1482955:1
position: 1482955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483147:1
position: 1483147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1485828-1487593:1:exon

position:1485828:1
position: 1485828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035345502.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477314,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1487593)
location: region:1417376-1487593:1
so has part: feature:1417376-1417515:1:exon
so has part: feature:1420144-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443753-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456796-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477314:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1487593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417376-1417515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1420144-1420517:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443753-1443861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1456796-1456912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1477186-1477314:1:exon

position:1477314:1
position: 1477314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1485828-1487593:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035345510.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1443756..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477314,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1487593)
location: region:1417376-1487593:1
so has part: feature:1417376-1417515:1:exon
so has part: feature:1420144-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443756-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456796-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477314:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1487593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417376-1417515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1420144-1420517:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443756-1443861:1:exon

position:1443756:1
position: 1443756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1456796-1456912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1477186-1477314:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1485828-1487593:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035345503.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456808..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1417376-1485959:1
so has part: feature:1417376-1417515:1:exon
so has part: feature:1420144-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443753-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456808-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

position:1485959:1
position: 1485959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417376-1417515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1420144-1420517:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443753-1443861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1456808-1456912:1:exon

position:1456808:1
position: 1456808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 14
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urn:…
SIO_000300: 21
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035345504.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456811..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1417376-1485959:1
so has part: feature:1417376-1417515:1:exon
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urn:…
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urn:…
SIO_000300: 9
SIO_000628: feature:1456811-1456912:1:exon

position:1456811:1
position: 1456811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
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SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035345505.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456811..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477314,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1417376-1485959:1
so has part: feature:1417376-1417515:1:exon
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urn:…
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SIO_000300: 14
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SIO_000300: 16
SIO_000628: feature:1476310-1476439:1:exon

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SIO_000300: 17
SIO_000628: feature:1477186-1477314:1:exon

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SIO_000300: 18
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SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035345501.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1443756..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1417376-1485959:1
so has part: feature:1417376-1417515:1:exon
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SIO_000300: 16
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SIO_000300: 17
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urn:…
SIO_000300: 22
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_035345506.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1417376-1485959:1
so has part: feature:1417376-1417515:1:exon
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urn:…
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urn:…
SIO_000300: 20
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_035345508.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1448733..1448899,1449864..1450134,1455349..1455442,1456808..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1417376-1485959:1
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urn:…
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urn:…
SIO_000300: 19
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_035345509.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1417376..1417515,1420144..1420517,1434653..1434721,1448733..1448899,1449864..1450134,1455349..1455442,1456811..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1417376-1485959:1
so has part: feature:1417376-1417515:1:exon
so has part: feature:1420144-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456811-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417376-1417515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1420144-1420517:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1456811-1456912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1477186-1477320:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X1
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443753-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456796-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201391.1
type: Protein
SIO_000068: ncbiprotein

position:1420155:1
position: 1420155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443753-1443861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456796-1456912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1477186-1477320:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X3
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477314,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443753-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456796-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477314:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443753-1443861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456796-1456912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1477186-1477314:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X4
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456808..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443753-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456808-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443753-1443861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456808-1456912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1477186-1477320:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X5
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456811..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443753-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456811-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443753-1443861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456811-1456912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1477186-1477320:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X6
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1443753..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456811..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477314,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443753-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456811-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477314:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443753-1443861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456811-1456912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1477186-1477314:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X2
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGELLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1443756..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443756-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456796-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443756-1443861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456796-1456912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1477186-1477320:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X10
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGELLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1443756..1443861,1446431..1446609,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477314,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1443756-1443861:1:exon
so has part: feature:1446431-1446609:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456796-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477314:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443756-1443861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446431-1446609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456796-1456912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1477186-1477314:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X7
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1448733..1448899,1449864..1450134,1455349..1455442,1456796..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456796-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1456796-1456912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1477186-1477320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X8
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1448733..1448899,1449864..1450134,1455349..1455442,1456808..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456808-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1456808-1456912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1477186-1477320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1485828-1485959:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X9
translation: MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPNMPVVLTSGAGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1420155..1420517,1434653..1434721,1448733..1448899,1449864..1450134,1455349..1455442,1456811..1456912,1462037..1462188,1465389..1465527,1467104..1467247,1468198..1468494,1470299..1470535,1475546..1475813,1476310..1476439,1477186..1477320,1478697..1478834,1480506..1480631,1481452..1481573,1482955..1483147,1485828..1485959)
location: region:1420155-1485959:1
so has part: feature:1420155-1420517:1:exon
so has part: feature:1434653-1434721:1:exon
so has part: feature:1448733-1448899:1:exon
so has part: feature:1449864-1450134:1:exon
so has part: feature:1455349-1455442:1:exon
so has part: feature:1456811-1456912:1:exon
so has part: feature:1462037-1462188:1:exon
so has part: feature:1465389-1465527:1:exon
so has part: feature:1467104-1467247:1:exon
so has part: feature:1468198-1468494:1:exon
so has part: feature:1470299-1470535:1:exon
so has part: feature:1475546-1475813:1:exon
so has part: feature:1476310-1476439:1:exon
so has part: feature:1477186-1477320:1:exon
so has part: feature:1478697-1478834:1:exon
so has part: feature:1480506-1480631:1:exon
so has part: feature:1481452-1481573:1:exon
so has part: feature:1482955-1483147:1:exon
so has part: feature:1485828-1485959:1:exon

XP_035201400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420155-1420517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434653-1434721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1448733-1448899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1449864-1450134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1455349-1455442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1456811-1456912:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1462037-1462188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1465389-1465527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1467104-1467247:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1468198-1468494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470299-1470535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1475546-1475813:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1476310-1476439:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1477186-1477320:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1478697-1478834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1480506-1480631:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1481452-1481573:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1482955-1483147:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1485828-1485959:1:exon

LOC118177847
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177847
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1460381..1460461
location: region:1460381-1460461:1
so has part: feature:1460381-1460461:1:exon
subclass of: SO_0000578

118177847
type: Gene
SIO_000068: ncbigene

position:1460381:1
position: 1460381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460461:1
position: 1460461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1460381-1460461:1:exon

LOC118177847
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: snoRNA
gene: LOC118177847
product: small nucleolar RNA SNORD103/SNORD85
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00188
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004755939.1
SIO_010081: LOC118177847
subclass of: SO_0000673
so part of: LOC118177847
location: 1460381..1460461
location: region:1460381-1460461:1
so has part: feature:1460381-1460461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1460381-1460461:1:exon

LOC118177848
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177848
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1483496..1483581
location: region:1483496-1483581:1
so has part: feature:1483496-1483581:1:exon
subclass of: SO_0000578

118177848
type: Gene
SIO_000068: ncbigene

position:1483496:1
position: 1483496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483581:1
position: 1483581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483496-1483581:1:exon

LOC118177848
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: snoRNA
gene: LOC118177848
product: small nucleolar RNA SNORD103/SNORD85
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00188
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004755940.1
SIO_010081: LOC118177848
subclass of: SO_0000673
so part of: LOC118177848
location: 1483496..1483581
location: region:1483496-1483581:1
so has part: feature:1483496-1483581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483496-1483581:1:exon

SDC3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SDC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1513482..1519180
location: region:1513482-1519180:1
so has part: feature:1513482-1519180:1:exon
subclass of: SO_0000010

118177812
type: Gene
SIO_000068: ncbigene

position:1513482:1
position: 1513482
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1519180:1
position: 1519180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513482-1519180:1:exon

SDC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SDC3
product: syndecan 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035345851.1
SIO_010081: SDC3
subclass of: SO_0000673
so part of: SDC3
location: join(<1513482..1513692,1514104..1514729,1515994..1516264,1516795..1519180)
location: region:1513482-1519180:1
so has part: feature:1513482-1513692:1:exon
so has part: feature:1514104-1514729:1:exon
so has part: feature:1515994-1516264:1:exon
so has part: feature:1516795-1519180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1513482-1513692:1:exon

position:1513692:1
position: 1513692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1514104-1514729:1:exon

position:1514104:1
position: 1514104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514729:1
position: 1514729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1515994-1516264:1:exon

position:1515994:1
position: 1515994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1516264:1
position: 1516264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1516795-1519180:1:exon

position:1516795:1
position: 1516795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SDC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SDC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syndecan-3
translation: PTLGAVQGPPWLWGPPCPRWGQLTRLSARLQAQRWRNENYERPVDLEGSGDDDPFGDDELDDVYSGSGSGYFEQESGLETAVSLTTDTSVTLPTTAAALPVTAVQPVATPFETSPTEDTVPEQTTGASYVPRVTEAPVIPSWKATTTSTTASEAPSTTTTTTTTTTAATTTTTATTTTTATTTSTTTVATAKPTTVRRFLPPFVTKAATMRATTLEMPTTSVLETSTPTEVATTQLVPSSTAKPRSLPKPSTSRTADLTEKSTALPSSPTTLPPTEAPQVEPGEVSTVLDSDLEVPVSSGPSGDFEIREEEETTRPELGNEVVAVVTPPSAPGLGRNVEPGLIDNTIESGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFYA
SIO_010081: SDC3
subclass of: SO_0000673
so part of: SDC3
location: join(<1513482..1513692,1514104..1514729,1515994..1516264,1516795..1516961)
location: region:1513482-1516961:1
so has part: feature:1513482-1513692:1:exon
so has part: feature:1514104-1514729:1:exon
so has part: feature:1515994-1516264:1:exon
so has part: feature:1516795-1516961:1:exon

XP_035201742.1
type: Protein
SIO_000068: ncbiprotein

position:1516961:1
position: 1516961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513482-1513692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1514104-1514729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1515994-1516264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1516795-1516961:1:exon

LAPTM5
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LAPTM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1693665..1715295
location: region:1693665-1715295:1
so has part: feature:1693665-1715295:1:exon
subclass of: SO_0000010

118177710
type: Gene
SIO_000068: ncbigene

position:1693665:1
position: 1693665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1715295:1
position: 1715295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1693665-1715295:1:exon

LAPTM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LAPTM5
product: lysosomal protein transmembrane 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_035345697.1
SIO_010081: LAPTM5
subclass of: SO_0000673
so part of: LAPTM5
location: join(1693665..1693914,1694824..1694969,1702538..1702631,1708780..1708856,1709552..1709680,1710192..1710317,1710864..1710959,1713410..1713502,1714500..1715295)
location: region:1693665-1715295:1
so has part: feature:1693665-1693914:1:exon
so has part: feature:1694824-1694969:1:exon
so has part: feature:1702538-1702631:1:exon
so has part: feature:1708780-1708856:1:exon
so has part: feature:1709552-1709680:1:exon
so has part: feature:1710192-1710317:1:exon
so has part: feature:1710864-1710959:1:exon
so has part: feature:1713410-1713502:1:exon
so has part: feature:1714500-1715295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1693665-1693914:1:exon

position:1693914:1
position: 1693914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1694824-1694969:1:exon

position:1694824:1
position: 1694824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694969:1
position: 1694969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1702538-1702631:1:exon

position:1702538:1
position: 1702538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702631:1
position: 1702631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1708780-1708856:1:exon

position:1708780:1
position: 1708780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1708856:1
position: 1708856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1709552-1709680:1:exon

position:1709552:1
position: 1709552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1709680:1
position: 1709680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1710192-1710317:1:exon

position:1710192:1
position: 1710192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710317:1
position: 1710317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1710864-1710959:1:exon

position:1710864:1
position: 1710864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710959:1
position: 1710959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1713410-1713502:1:exon

position:1713410:1
position: 1713410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1713502:1
position: 1713502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1714500-1715295:1:exon

position:1714500:1
position: 1714500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAPTM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LAPTM5
product: lysosomal protein transmembrane 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035345696.1
SIO_010081: LAPTM5
subclass of: SO_0000673
so part of: LAPTM5
location: join(1694577..1694969,1702538..1702631,1708780..1708856,1709552..1709680,1710192..1710317,1710864..1710959,1713410..1713502,1714500..1715295)
location: region:1694577-1715295:1
so has part: feature:1694577-1694969:1:exon
so has part: feature:1702538-1702631:1:exon
so has part: feature:1708780-1708856:1:exon
so has part: feature:1709552-1709680:1:exon
so has part: feature:1710192-1710317:1:exon
so has part: feature:1710864-1710959:1:exon
so has part: feature:1713410-1713502:1:exon
so has part: feature:1714500-1715295:1:exon

position:1694577:1
position: 1694577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1694577-1694969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1702538-1702631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1708780-1708856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1709552-1709680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1710192-1710317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1710864-1710959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1713410-1713502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1714500-1715295:1:exon

LAPTM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LAPTM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal-associated transmembrane protein 5
translation: MTTETTTEPPKCCFFNIKTATVALGIFHMVMSILLLIEYSLEVASGKGFCKDLDKDYYRVADVITSFLLIIMLFIISFNLLLGVVKNRERLLIPFLALQIMDFLLSLLTMFSSYIQVPAIISVSSLSHMQGRSKIPFLALQLLDFCLSILTLCSSYMEVPTYLSLKSSDNGGFLPTLEKLPTEEYAKVMVTFTIAFIAVLFLKAYMFKCVLSCFKYIKASKRGSVKVDPQAAEKAVLPSYEEALELPSKECPPPYVAI
SIO_010081: LAPTM5
subclass of: SO_0000673
so part of: LAPTM5
location: join(1694883..1694969,1702538..1702631,1708780..1708856,1709552..1709680,1710192..1710317,1710864..1710959,1713410..1713502,1714500..1714574)
location: region:1694883-1714574:1
so has part: feature:1694883-1694969:1:exon
so has part: feature:1702538-1702631:1:exon
so has part: feature:1708780-1708856:1:exon
so has part: feature:1709552-1709680:1:exon
so has part: feature:1710192-1710317:1:exon
so has part: feature:1710864-1710959:1:exon
so has part: feature:1713410-1713502:1:exon
so has part: feature:1714500-1714574:1:exon

XP_035201587.1
type: Protein
SIO_000068: ncbiprotein

position:1694883:1
position: 1694883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1714574:1
position: 1714574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1694883-1694969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1702538-1702631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1708780-1708856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1709552-1709680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1710192-1710317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1710864-1710959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1713410-1713502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1714500-1714574:1:exon

LAPTM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LAPTM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal-associated transmembrane protein 5
translation: MTTETTTEPPKCCFFNIKTATVALGIFHMVMSILLLIEYSLEVASGKGFCKDLDKDYYRVADVITSFLLIIMLFIISFNLLLGVVKNRERLLIPFLALQIMDFLLSLLTMFSSYIQVPAIISVSSLSHMQGRSKIPFLALQLLDFCLSILTLCSSYMEVPTYLSLKSSDNGGFLPTLEKLPTEEYAKVMVTFTIAFIAVLFLKAYMFKCVLSCFKYIKASKRGSVKVDPQAAEKAVLPSYEEALELPSKECPPPYVAI
SIO_010081: LAPTM5
subclass of: SO_0000673
so part of: LAPTM5
location: join(1694883..1694969,1702538..1702631,1708780..1708856,1709552..1709680,1710192..1710317,1710864..1710959,1713410..1713502,1714500..1714574)
location: region:1694883-1714574:1
so has part: feature:1694883-1694969:1:exon
so has part: feature:1702538-1702631:1:exon
so has part: feature:1708780-1708856:1:exon
so has part: feature:1709552-1709680:1:exon
so has part: feature:1710192-1710317:1:exon
so has part: feature:1710864-1710959:1:exon
so has part: feature:1713410-1713502:1:exon
so has part: feature:1714500-1714574:1:exon

XP_035201588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1694883-1694969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1702538-1702631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1708780-1708856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1709552-1709680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1710192-1710317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1710864-1710959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1713410-1713502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1714500-1714574:1:exon

LOC118177711
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1712973..1724532)
location: region:1712973-1724532:-1
so has part: feature:1712973-1724532:-1:exon
subclass of: SO_0000011

118177711
type: Gene
SIO_000068: ncbigene

position:1712973:-1
position: 1712973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724532:-1
position: 1724532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1712973-1724532:-1:exon

LOC118177711
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177711
product: uncharacterized LOC118177711
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004755897.1
SIO_010081: LOC118177711
subclass of: SO_0000673
so part of: LOC118177711
location: complement(join(1712973..1713094,1713982..1714069,1724403..1724532))
location: region:1712973-1724532:-1
so has part: feature:1724403-1724532:-1:exon
so has part: feature:1713982-1714069:-1:exon
so has part: feature:1712973-1713094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1724403-1724532:-1:exon

position:1724403:-1
position: 1724403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1713982-1714069:-1:exon

position:1713982:-1
position: 1713982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714069:-1
position: 1714069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1712973-1713094:-1:exon

position:1713094:-1
position: 1713094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MATN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MATN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1724373..1741568
location: region:1724373-1741568:1
so has part: feature:1724373-1741568:1:exon
subclass of: SO_0000010

118177709
type: Gene
SIO_000068: ncbigene

position:1724373:1
position: 1724373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741568:1
position: 1741568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724373-1741568:1:exon

MATN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MATN1
product: matrilin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035345695.1
SIO_010081: MATN1
subclass of: SO_0000673
so part of: MATN1
location: join(1724373..1724548,1727530..1727876,1732949..1733171,1735685..1735810,1736066..1736479,1738342..1738494,1739023..1739103,1740209..1741568)
location: region:1724373-1741568:1
so has part: feature:1724373-1724548:1:exon
so has part: feature:1727530-1727876:1:exon
so has part: feature:1732949-1733171:1:exon
so has part: feature:1735685-1735810:1:exon
so has part: feature:1736066-1736479:1:exon
so has part: feature:1738342-1738494:1:exon
so has part: feature:1739023-1739103:1:exon
so has part: feature:1740209-1741568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1724373-1724548:1:exon

position:1724548:1
position: 1724548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1727530-1727876:1:exon

position:1727530:1
position: 1727530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727876:1
position: 1727876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1732949-1733171:1:exon

position:1732949:1
position: 1732949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733171:1
position: 1733171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1735685-1735810:1:exon

position:1735685:1
position: 1735685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735810:1
position: 1735810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1736066-1736479:1:exon

position:1736066:1
position: 1736066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736479:1
position: 1736479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1738342-1738494:1:exon

position:1738342:1
position: 1738342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1738494:1
position: 1738494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1739023-1739103:1:exon

position:1739023:1
position: 1739023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1739103:1
position: 1739103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1740209-1741568:1:exon

position:1740209:1
position: 1740209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MATN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MATN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage matrix protein
translation: MDRIFSTVLLSLLLLLQSYGVWGAPPQPRGTLCRTKPTDLVFVIDSSRSVRPQEFEKVKVFMSRVIEGLDVGPNSTRVGVINYASAVKNEFSLKAHQTKAGLLQAVRRIEPLSTGTMTGLAIQFAISRAFSDSEGARLRSPNINKVAIVVTDGRPQDGVQDVSARARAAGIEIFAIGVGRVDMHTLRQIASEPLDDHVDYVESYSVIEKLTHKFQEAFCVVSDLCATGDHDCEQICISTPGSYKCACKEGFTLNNDGKTCSACSGGSGSALDLVFLIDGSKSVRPENFELVKKFINQIVESLEVSEKQAQVGLVQYSSSVRQEFPLGQFKNKKDIKAAVKKMDYMEKGTMTGQALKYLIDSSFSIANGARPGVPKVGIVFTDGRSQDYITDAAKKAKDLGFRMFAVGVGNAVEDELREIASEPVAEHYFYTADFRTISNIGKKLQMKICIEEDPCECKSIVKFQTKVEELIDSLQRKLEAVAKRIEALENKII
SIO_010081: MATN1
subclass of: SO_0000673
so part of: MATN1
location: join(1724461..1724548,1727530..1727876,1732949..1733171,1735685..1735810,1736066..1736479,1738342..1738494,1739023..1739103,1740209..1740258)
location: region:1724461-1740258:1
so has part: feature:1724461-1724548:1:exon
so has part: feature:1727530-1727876:1:exon
so has part: feature:1732949-1733171:1:exon
so has part: feature:1735685-1735810:1:exon
so has part: feature:1736066-1736479:1:exon
so has part: feature:1738342-1738494:1:exon
so has part: feature:1739023-1739103:1:exon
so has part: feature:1740209-1740258:1:exon

XP_035201586.1
type: Protein
SIO_000068: ncbiprotein

position:1724461:1
position: 1724461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740258:1
position: 1740258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724461-1724548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1727530-1727876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1732949-1733171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1735685-1735810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1736066-1736479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738342-1738494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1739023-1739103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1740209-1740258:1:exon

LOC118177838
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1897174..1913557
location: region:1897174-1913557:1
so has part: feature:1897174-1913557:1:exon
subclass of: SO_0000011

118177838
type: Gene
SIO_000068: ncbigene

position:1897174:1
position: 1897174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1913557:1
position: 1913557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897174-1913557:1:exon

LOC118177838
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177838
product: uncharacterized LOC118177838, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004755929.1
SIO_010081: LOC118177838
subclass of: SO_0000673
so part of: LOC118177838
location: join(1897174..1897340,1907919..1908673,1912713..1913557)
location: region:1897174-1913557:1
so has part: feature:1897174-1897340:1:exon
so has part: feature:1907919-1908673:1:exon
so has part: feature:1912713-1913557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1897174-1897340:1:exon

position:1897340:1
position: 1897340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1907919-1908673:1:exon

position:1907919:1
position: 1907919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1908673:1
position: 1908673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1912713-1913557:1:exon

position:1912713:1
position: 1912713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177838
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177838
product: uncharacterized LOC118177838, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004755930.1
SIO_010081: LOC118177838
subclass of: SO_0000673
so part of: LOC118177838
location: join(1897436..1897526,1907919..1908673,1912713..1913557)
location: region:1897436-1913557:1
so has part: feature:1897436-1897526:1:exon
so has part: feature:1907919-1908673:1:exon
so has part: feature:1912713-1913557:1:exon

position:1897436:1
position: 1897436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897436-1897526:1:exon

position:1897526:1
position: 1897526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1907919-1908673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1912713-1913557:1:exon

LOC118177564
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1981266..1984442
location: region:1981266-1984442:1
so has part: feature:1981266-1984442:1:exon
subclass of: SO_0000011

118177564
type: Gene
SIO_000068: ncbigene

position:1981266:1
position: 1981266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984442:1
position: 1984442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981266-1984442:1:exon

LOC118177564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177564
product: uncharacterized LOC118177564
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004755862.1
SIO_010081: LOC118177564
subclass of: SO_0000673
so part of: LOC118177564
location: join(1981266..1981310,1981812..1982021,1982420..1984442)
location: region:1981266-1984442:1
so has part: feature:1981266-1981310:1:exon
so has part: feature:1981812-1982021:1:exon
so has part: feature:1982420-1984442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981266-1981310:1:exon

position:1981310:1
position: 1981310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1981812-1982021:1:exon

position:1981812:1
position: 1981812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982021:1
position: 1982021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1982420-1984442:1:exon

position:1982420:1
position: 1982420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177718
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2017924..2023759
location: region:2017924-2023759:1
so has part: feature:2017924-2023759:1:exon
subclass of: SO_0000011

118177718
type: Gene
SIO_000068: ncbigene

position:2017924:1
position: 2017924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023759:1
position: 2023759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2017924-2023759:1:exon

LOC118177718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177718
product: uncharacterized LOC118177718
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004755901.1
SIO_010081: LOC118177718
subclass of: SO_0000673
so part of: LOC118177718
location: join(2017924..2018080,2021476..2021583,2023340..2023759)
location: region:2017924-2023759:1
so has part: feature:2017924-2018080:1:exon
so has part: feature:2021476-2021583:1:exon
so has part: feature:2023340-2023759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2017924-2018080:1:exon

position:2018080:1
position: 2018080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2021476-2021583:1:exon

position:2021476:1
position: 2021476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2021583:1
position: 2021583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2023340-2023759:1:exon

position:2023340:1
position: 2023340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177719
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2038147..2046953
location: region:2038147-2046953:1
so has part: feature:2038147-2046953:1:exon
subclass of: SO_0000011

118177719
type: Gene
SIO_000068: ncbigene

position:2038147:1
position: 2038147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2046953:1
position: 2046953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2038147-2046953:1:exon

LOC118177719
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177719
product: uncharacterized LOC118177719
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004755902.1
SIO_010081: LOC118177719
subclass of: SO_0000673
so part of: LOC118177719
location: join(2038147..2038642,2038744..2038835,2046888..2046953)
location: region:2038147-2046953:1
so has part: feature:2038147-2038642:1:exon
so has part: feature:2038744-2038835:1:exon
so has part: feature:2046888-2046953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2038147-2038642:1:exon

position:2038642:1
position: 2038642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2038744-2038835:1:exon

position:2038744:1
position: 2038744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038835:1
position: 2038835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2046888-2046953:1:exon

position:2046888:1
position: 2046888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177717
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177717
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2047251..2089045
location: region:2047251-2089045:1
so has part: feature:2047251-2089045:1:exon
subclass of: SO_0000011

118177717
type: Gene
SIO_000068: ncbigene

position:2047251:1
position: 2047251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089045:1
position: 2089045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2047251-2089045:1:exon

LOC118177717
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177717
product: uncharacterized LOC118177717
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004755900.1
SIO_010081: LOC118177717
subclass of: SO_0000673
so part of: LOC118177717
location: join(2047251..2047387,2048366..2048500,2053357..2053468,2086460..2089045)
location: region:2047251-2089045:1
so has part: feature:2047251-2047387:1:exon
so has part: feature:2048366-2048500:1:exon
so has part: feature:2053357-2053468:1:exon
so has part: feature:2086460-2089045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2047251-2047387:1:exon

position:2047387:1
position: 2047387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2048366-2048500:1:exon

position:2048366:1
position: 2048366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048500:1
position: 2048500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2053357-2053468:1:exon

position:2053357:1
position: 2053357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2053468:1
position: 2053468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2086460-2089045:1:exon

position:2086460:1
position: 2086460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177806
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2185478..2191255)
location: region:2185478-2191255:-1
so has part: feature:2185478-2191255:-1:exon
subclass of: SO_0000011

118177806
type: Gene
SIO_000068: ncbigene

position:2185478:-1
position: 2185478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2191255:-1
position: 2191255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185478-2191255:-1:exon

LOC118177806
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177806
product: uncharacterized LOC118177806
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004755927.1
SIO_010081: LOC118177806
subclass of: SO_0000673
so part of: LOC118177806
location: complement(join(2185478..2188045,2191105..2191255))
location: region:2185478-2191255:-1
so has part: feature:2191105-2191255:-1:exon
so has part: feature:2185478-2188045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2191105-2191255:-1:exon

position:2191105:-1
position: 2191105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2185478-2188045:-1:exon

position:2188045:-1
position: 2188045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTPRU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2219985..2260687)
location: region:2219985-2260687:-1
so has part: feature:2219985-2260687:-1:exon
subclass of: SO_0000010

118177676
type: Gene
SIO_000068: ncbigene

position:2219985:-1
position: 2219985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260687:-1
position: 2260687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2219985-2260687:-1:exon

PTPRU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PTPRU
product: protein tyrosine phosphatase receptor type U, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_035345630.1
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2219985..2222603,2224867..2225002,2225588..2225745,2227827..2227952,2229892..2230032,2232083..2232256,2232369..2232518,2232858..2232993,2234241..2234395,2235213..2235329,2235423..2235520,2235785..2235821,2236241..2236258,2236726..2236802,2237363..2237435,2238586..2238776,2240279..2240436,2243213..2243351,2243980..2244016,2245620..2245893,2245982..2246084,2246358..2246559,2246880..2246989,2250083..2250391,2252620..2252913,2253504..2253678,2253819..2253934,2254656..2254737,2254907..2255178,2260561..2260687))
location: region:2219985-2260687:-1
so has part: feature:2260561-2260687:-1:exon
so has part: feature:2254907-2255178:-1:exon
so has part: feature:2254656-2254737:-1:exon
so has part: feature:2253819-2253934:-1:exon
so has part: feature:2253504-2253678:-1:exon
so has part: feature:2252620-2252913:-1:exon
so has part: feature:2250083-2250391:-1:exon
so has part: feature:2246880-2246989:-1:exon
so has part: feature:2246358-2246559:-1:exon
so has part: feature:2245982-2246084:-1:exon
so has part: feature:2245620-2245893:-1:exon
so has part: feature:2243980-2244016:-1:exon
so has part: feature:2243213-2243351:-1:exon
so has part: feature:2240279-2240436:-1:exon
so has part: feature:2238586-2238776:-1:exon
so has part: feature:2237363-2237435:-1:exon
so has part: feature:2236726-2236802:-1:exon
so has part: feature:2236241-2236258:-1:exon
so has part: feature:2235785-2235821:-1:exon
so has part: feature:2235423-2235520:-1:exon
so has part: feature:2235213-2235329:-1:exon
so has part: feature:2234241-2234395:-1:exon
so has part: feature:2232858-2232993:-1:exon
so has part: feature:2232369-2232518:-1:exon
so has part: feature:2232083-2232256:-1:exon
so has part: feature:2229892-2230032:-1:exon
so has part: feature:2227827-2227952:-1:exon
so has part: feature:2225588-2225745:-1:exon
so has part: feature:2224867-2225002:-1:exon
so has part: feature:2219985-2222603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2260561-2260687:-1:exon

position:2260561:-1
position: 2260561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2254907-2255178:-1:exon

position:2254907:-1
position: 2254907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2255178:-1
position: 2255178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2254656-2254737:-1:exon

position:2254656:-1
position: 2254656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254737:-1
position: 2254737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2253819-2253934:-1:exon

position:2253819:-1
position: 2253819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253934:-1
position: 2253934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2253504-2253678:-1:exon

position:2253504:-1
position: 2253504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253678:-1
position: 2253678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2252620-2252913:-1:exon

position:2252620:-1
position: 2252620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2252913:-1
position: 2252913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2250083-2250391:-1:exon

position:2250083:-1
position: 2250083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2250391:-1
position: 2250391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2246880-2246989:-1:exon

position:2246880:-1
position: 2246880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246989:-1
position: 2246989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2246358-2246559:-1:exon

position:2246358:-1
position: 2246358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246559:-1
position: 2246559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2245982-2246084:-1:exon

position:2245982:-1
position: 2245982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246084:-1
position: 2246084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2245620-2245893:-1:exon

position:2245620:-1
position: 2245620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2245893:-1
position: 2245893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2243980-2244016:-1:exon

position:2243980:-1
position: 2243980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244016:-1
position: 2244016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2243213-2243351:-1:exon

position:2243213:-1
position: 2243213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2243351:-1
position: 2243351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2240279-2240436:-1:exon

position:2240279:-1
position: 2240279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240436:-1
position: 2240436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2238586-2238776:-1:exon

position:2238586:-1
position: 2238586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2238776:-1
position: 2238776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2237363-2237435:-1:exon

position:2237363:-1
position: 2237363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2237435:-1
position: 2237435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2236726-2236802:-1:exon

position:2236726:-1
position: 2236726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236802:-1
position: 2236802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2236241-2236258:-1:exon

position:2236241:-1
position: 2236241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236258:-1
position: 2236258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2235785-2235821:-1:exon

position:2235785:-1
position: 2235785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235821:-1
position: 2235821
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:2235423-2235520:-1:exon

position:2235423:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235520:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:2235213-2235329:-1:exon

position:2235213:-1
position: 2235213
reference: sequence
type: ReverseStrandPosition
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position:2235329:-1
position: 2235329
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:2234241-2234395:-1:exon

position:2234241:-1
position: 2234241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2234395:-1
position: 2234395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2232858-2232993:-1:exon

position:2232858:-1
position: 2232858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232993:-1
position: 2232993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2232369-2232518:-1:exon

position:2232369:-1
position: 2232369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232518:-1
position: 2232518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2232083-2232256:-1:exon

position:2232083:-1
position: 2232083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232256:-1
position: 2232256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2229892-2230032:-1:exon

position:2229892:-1
position: 2229892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230032:-1
position: 2230032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2227827-2227952:-1:exon

position:2227827:-1
position: 2227827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227952:-1
position: 2227952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2225588-2225745:-1:exon

position:2225588:-1
position: 2225588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2225745:-1
position: 2225745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2224867-2225002:-1:exon

position:2224867:-1
position: 2224867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2225002:-1
position: 2225002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2219985-2222603:-1:exon

position:2222603:-1
position: 2222603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTPRU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PTPRU
product: protein tyrosine phosphatase receptor type U, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_035345629.1
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2219985..2222603,2224867..2225002,2225588..2225745,2227827..2227952,2229892..2230032,2232083..2232256,2232369..2232518,2232858..2232993,2234241..2234395,2235213..2235329,2235423..2235520,2235785..2235821,2236726..2236802,2237363..2237435,2238586..2238776,2240279..2240436,2240999..2241028,2243213..2243351,2243980..2244016,2245620..2245893,2245982..2246084,2246358..2246559,2246880..2246989,2250083..2250391,2252620..2252913,2253504..2253678,2253819..2253934,2254656..2254737,2254907..2255178,2260561..2260687))
location: region:2219985-2260687:-1
so has part: feature:2260561-2260687:-1:exon
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so has part: feature:2238586-2238776:-1:exon
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so has part: feature:2232858-2232993:-1:exon
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so has part: feature:2232083-2232256:-1:exon
so has part: feature:2229892-2230032:-1:exon
so has part: feature:2227827-2227952:-1:exon
so has part: feature:2225588-2225745:-1:exon
so has part: feature:2224867-2225002:-1:exon
so has part: feature:2219985-2222603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2260561-2260687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2254907-2255178:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:2253819-2253934:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:2252620-2252913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2250083-2250391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2246880-2246989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2246358-2246559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2245982-2246084:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2245620-2245893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2243980-2244016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2243213-2243351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2240999-2241028:-1:exon

position:2240999:-1
position: 2240999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2241028:-1
position: 2241028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2240279-2240436:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2238586-2238776:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2237363-2237435:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2236726-2236802:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2235785-2235821:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2235423-2235520:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2235213-2235329:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2234241-2234395:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2232858-2232993:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2232369-2232518:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2232083-2232256:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2229892-2230032:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2227827-2227952:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2225588-2225745:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2224867-2225002:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2219985-2222603:-1:exon

PTPRU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PTPRU
product: protein tyrosine phosphatase receptor type U, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_035345628.1
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2219985..2222603,2224867..2225002,2225588..2225745,2227827..2227952,2229892..2230032,2232083..2232256,2232369..2232518,2232858..2232993,2234241..2234395,2235213..2235329,2235423..2235520,2235785..2235821,2236241..2236258,2236726..2236802,2237363..2237435,2238586..2238776,2240279..2240436,2240999..2241028,2243213..2243351,2243980..2244016,2245620..2245893,2245982..2246084,2246358..2246559,2246880..2246989,2250083..2250391,2252620..2252913,2253504..2253678,2253819..2253934,2254656..2254737,2254907..2255178,2260561..2260687))
location: region:2219985-2260687:-1
so has part: feature:2260561-2260687:-1:exon
so has part: feature:2254907-2255178:-1:exon
so has part: feature:2254656-2254737:-1:exon
so has part: feature:2253819-2253934:-1:exon
so has part: feature:2253504-2253678:-1:exon
so has part: feature:2252620-2252913:-1:exon
so has part: feature:2250083-2250391:-1:exon
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so has part: feature:2240999-2241028:-1:exon
so has part: feature:2240279-2240436:-1:exon
so has part: feature:2238586-2238776:-1:exon
so has part: feature:2237363-2237435:-1:exon
so has part: feature:2236726-2236802:-1:exon
so has part: feature:2236241-2236258:-1:exon
so has part: feature:2235785-2235821:-1:exon
so has part: feature:2235423-2235520:-1:exon
so has part: feature:2235213-2235329:-1:exon
so has part: feature:2234241-2234395:-1:exon
so has part: feature:2232858-2232993:-1:exon
so has part: feature:2232369-2232518:-1:exon
so has part: feature:2232083-2232256:-1:exon
so has part: feature:2229892-2230032:-1:exon
so has part: feature:2227827-2227952:-1:exon
so has part: feature:2225588-2225745:-1:exon
so has part: feature:2224867-2225002:-1:exon
so has part: feature:2219985-2222603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2260561-2260687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2254907-2255178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2254656-2254737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253819-2253934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2253504-2253678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2252620-2252913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2250083-2250391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2246880-2246989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2246358-2246559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2245982-2246084:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2245620-2245893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2243980-2244016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2243213-2243351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2240999-2241028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2240279-2240436:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2238586-2238776:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2237363-2237435:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2236726-2236802:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2236241-2236258:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2235785-2235821:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2235423-2235520:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2235213-2235329:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2234241-2234395:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2232858-2232993:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2232369-2232518:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2232083-2232256:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2229892-2230032:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2227827-2227952:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2225588-2225745:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2224867-2225002:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2219985-2222603:-1:exon

PTPRU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase U isoform X3
translation: MMPHLTADLPHGSYLMVNASQHAAGQRAHLLFQALSENDTHCLQFSYFMYSRDGHSPGTLSAYVRVTGGPVGSAVWNASGSHGRQWHQAELAVSLFWPNEYQVLFEAVISSERRGYLGLDDILLLNYPCSKAPHFSRLGDVEVNAGQNATFQCVAAGKAAEAERFLMQRQSGEVVPAASVKHISHRRFLATFQLDEVSKGEQDLYRCVTQSSRGAGVSNFAELIVKEPPTPIAPPQLLRAGSTYLIIQLNTNSIIGDGPIVRKEIEYRMTSGPWSEVHAVNMQTYKLWHLDPDTEYEISVLLTRPGEGGTGKPGPPLISRTKCAEPMRAPKGLAFSEIQSRQLTLQWEPLGYNLTRCHTYTVSLCYRYLVGSGHNQTFRECAKMERNANRYTIKNLLPYKNIHVKLILSNPEGRKEGKEVTFQTDEDVPGGIASESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPAVNVPGPRRTVSKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQTALTEITTNISAPTFDYGDMPSPLGESESTITVLLRPAQGRGAPISTYQVIVEEDRPKKIKRELGGQECFPVPLTFDDAVSRGSVHYFGAELPASSLTEAKPFTVGDNQTYSGYWNPPLEPKKAYLIYFQAMSNLKGETRLNCIRIARKAACKESKRPLEVSQHSEEMGLILGICAGGLVVLIILLGAIIVVIRKGKPVNMTKATINYRHEKTHMMSAIDRSFTDQSTLQEDERLGLSFMDTHNYSNRGDQRSSVVNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWDASKKKDKTKGRQDHVSTYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLVQSETLAEYAVRTFALERRGYSARHEVKQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYVFIHDAILEACLCGETSIPASEFKPTYKEMVRIEPQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNRERNRSMDVLPPDRCLPFLISVDGDSNNYINAALTDSYTKSAAFIVTLHPLQNTTTDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGLQHYGPMEVEYVSGAADEDIVSRLFRVQNITRLQEGHLMVRHFQYLRWSAYRDTPDSKKSFLHLLAQVERWQKESGDGRTVVHCLNGGGRSGTYCASTMILEMLKCHNMADVFYAAKTLRNYKPNMVETLEQYHFCYDIALEYLESLETR
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2222541..2222603,2224867..2225002,2225588..2225745,2227827..2227952,2229892..2230032,2232083..2232256,2232369..2232518,2232858..2232993,2234241..2234395,2235213..2235329,2235423..2235520,2235785..2235821,2236241..2236258,2236726..2236802,2237363..2237435,2238586..2238776,2240279..2240436,2243213..2243351,2243980..2244016,2245620..2245893,2245982..2246084,2246358..2246559,2246880..2246989,2250083..2250391,2252620..2252913,2253504..2253678,2253819..2253934,2254656..2254737,2254907..2255178,2260561..2260594))
location: region:2222541-2260594:-1
so has part: feature:2260561-2260594:-1:exon
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so has part: feature:2237363-2237435:-1:exon
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so has part: feature:2235213-2235329:-1:exon
so has part: feature:2234241-2234395:-1:exon
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so has part: feature:2229892-2230032:-1:exon
so has part: feature:2227827-2227952:-1:exon
so has part: feature:2225588-2225745:-1:exon
so has part: feature:2224867-2225002:-1:exon
so has part: feature:2222541-2222603:-1:exon

XP_035201521.1
type: Protein
SIO_000068: ncbiprotein

position:2222541:-1
position: 2222541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260594:-1
position: 2260594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2260561-2260594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2254907-2255178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2254656-2254737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253819-2253934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2253504-2253678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2252620-2252913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2250083-2250391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2246880-2246989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2246358-2246559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2245982-2246084:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2245620-2245893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2243980-2244016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2243213-2243351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2240279-2240436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2238586-2238776:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2237363-2237435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2236726-2236802:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2236241-2236258:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2235785-2235821:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2235423-2235520:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2235213-2235329:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2234241-2234395:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2232858-2232993:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2232369-2232518:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2232083-2232256:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2229892-2230032:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2227827-2227952:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2225588-2225745:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2224867-2225002:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2222541-2222603:-1:exon

PTPRU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase U isoform X2
translation: MMPHLTADLPHGSYLMVNASQHAAGQRAHLLFQALSENDTHCLQFSYFMYSRDGHSPGTLSAYVRVTGGPVGSAVWNASGSHGRQWHQAELAVSLFWPNEYQVLFEAVISSERRGYLGLDDILLLNYPCSKAPHFSRLGDVEVNAGQNATFQCVAAGKAAEAERFLMQRQSGEVVPAASVKHISHRRFLATFQLDEVSKGEQDLYRCVTQSSRGAGVSNFAELIVKEPPTPIAPPQLLRAGSTYLIIQLNTNSIIGDGPIVRKEIEYRMTSGPWSEVHAVNMQTYKLWHLDPDTEYEISVLLTRPGEGGTGKPGPPLISRTKCAEPMRAPKGLAFSEIQSRQLTLQWEPLGYNLTRCHTYTVSLCYRYLVGSGHNQTFRECAKMERNANRYTIKNLLPYKNIHVKLILSNPEGRKEGKEVTFQTDEDVPGGIASESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPAVNVPGPRRTVSKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQTALTEITTNISAPTFDYGDMPSPLGESESTITVLLRPAQGRGAPISTYQVIVEEDRPKKIKRELGGQECFPVPLTFDDAVSRGSVHYFGAELPASSLTEAKPFTVGDNQTYSGYWNPPLEPKKAYLIYFQAMSNLKGETRLNCIRIARKAACKESKRPLEVSQHSEEMGLILGICAGGLVVLIILLGAIIVVIRKGRNYYSYSYYPKPVNMTKATINYRHEKTHMMSAIDRSFTDQSTLQEDERLGLSFMDTHNYSNRGDQRSSVVNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWDASKKKDKTKGRQDHVSTYDRHRVKLHPLLGDPNSDYINANYIDGYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLVQSETLAEYAVRTFALERRGYSARHEVKQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYVFIHDAILEACLCGETSIPASEFKPTYKEMVRIEPQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNRERNRSMDVLPPDRCLPFLISVDGDSNNYINAALTDSYTKSAAFIVTLHPLQNTTTDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGLQHYGPMEVEYVSGAADEDIVSRLFRVQNITRLQEGHLMVRHFQYLRWSAYRDTPDSKKSFLHLLAQVERWQKESGDGRTVVHCLNGGGRSGTYCASTMILEMLKCHNMADVFYAAKTLRNYKPNMVETLEQYHFCYDIALEYLESLETR
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2222541..2222603,2224867..2225002,2225588..2225745,2227827..2227952,2229892..2230032,2232083..2232256,2232369..2232518,2232858..2232993,2234241..2234395,2235213..2235329,2235423..2235520,2235785..2235821,2236726..2236802,2237363..2237435,2238586..2238776,2240279..2240436,2240999..2241028,2243213..2243351,2243980..2244016,2245620..2245893,2245982..2246084,2246358..2246559,2246880..2246989,2250083..2250391,2252620..2252913,2253504..2253678,2253819..2253934,2254656..2254737,2254907..2255178,2260561..2260594))
location: region:2222541-2260594:-1
so has part: feature:2260561-2260594:-1:exon
so has part: feature:2254907-2255178:-1:exon
so has part: feature:2254656-2254737:-1:exon
so has part: feature:2253819-2253934:-1:exon
so has part: feature:2253504-2253678:-1:exon
so has part: feature:2252620-2252913:-1:exon
so has part: feature:2250083-2250391:-1:exon
so has part: feature:2246880-2246989:-1:exon
so has part: feature:2246358-2246559:-1:exon
so has part: feature:2245982-2246084:-1:exon
so has part: feature:2245620-2245893:-1:exon
so has part: feature:2243980-2244016:-1:exon
so has part: feature:2243213-2243351:-1:exon
so has part: feature:2240999-2241028:-1:exon
so has part: feature:2240279-2240436:-1:exon
so has part: feature:2238586-2238776:-1:exon
so has part: feature:2237363-2237435:-1:exon
so has part: feature:2236726-2236802:-1:exon
so has part: feature:2235785-2235821:-1:exon
so has part: feature:2235423-2235520:-1:exon
so has part: feature:2235213-2235329:-1:exon
so has part: feature:2234241-2234395:-1:exon
so has part: feature:2232858-2232993:-1:exon
so has part: feature:2232369-2232518:-1:exon
so has part: feature:2232083-2232256:-1:exon
so has part: feature:2229892-2230032:-1:exon
so has part: feature:2227827-2227952:-1:exon
so has part: feature:2225588-2225745:-1:exon
so has part: feature:2224867-2225002:-1:exon
so has part: feature:2222541-2222603:-1:exon

XP_035201520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2260561-2260594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2254907-2255178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2254656-2254737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253819-2253934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2253504-2253678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2252620-2252913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2250083-2250391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2246880-2246989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2246358-2246559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2245982-2246084:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2245620-2245893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2243980-2244016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2243213-2243351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2240999-2241028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2240279-2240436:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2238586-2238776:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2237363-2237435:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2236726-2236802:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2235785-2235821:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2235423-2235520:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2235213-2235329:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2234241-2234395:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2232858-2232993:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2232369-2232518:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2232083-2232256:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2229892-2230032:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2227827-2227952:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2225588-2225745:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2224867-2225002:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2222541-2222603:-1:exon

PTPRU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase U isoform X1
translation: MMPHLTADLPHGSYLMVNASQHAAGQRAHLLFQALSENDTHCLQFSYFMYSRDGHSPGTLSAYVRVTGGPVGSAVWNASGSHGRQWHQAELAVSLFWPNEYQVLFEAVISSERRGYLGLDDILLLNYPCSKAPHFSRLGDVEVNAGQNATFQCVAAGKAAEAERFLMQRQSGEVVPAASVKHISHRRFLATFQLDEVSKGEQDLYRCVTQSSRGAGVSNFAELIVKEPPTPIAPPQLLRAGSTYLIIQLNTNSIIGDGPIVRKEIEYRMTSGPWSEVHAVNMQTYKLWHLDPDTEYEISVLLTRPGEGGTGKPGPPLISRTKCAEPMRAPKGLAFSEIQSRQLTLQWEPLGYNLTRCHTYTVSLCYRYLVGSGHNQTFRECAKMERNANRYTIKNLLPYKNIHVKLILSNPEGRKEGKEVTFQTDEDVPGGIASESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPAVNVPGPRRTVSKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQTALTEITTNISAPTFDYGDMPSPLGESESTITVLLRPAQGRGAPISTYQVIVEEDRPKKIKRELGGQECFPVPLTFDDAVSRGSVHYFGAELPASSLTEAKPFTVGDNQTYSGYWNPPLEPKKAYLIYFQAMSNLKGETRLNCIRIARKAACKESKRPLEVSQHSEEMGLILGICAGGLVVLIILLGAIIVVIRKGRNYYSYSYYPKPVNMTKATINYRHEKTHMMSAIDRSFTDQSTLQEDERLGLSFMDTHNYSNRGDQRSSVVNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWDASKKKDKTKGRQDHVSTYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLVQSETLAEYAVRTFALERRGYSARHEVKQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYVFIHDAILEACLCGETSIPASEFKPTYKEMVRIEPQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNRERNRSMDVLPPDRCLPFLISVDGDSNNYINAALTDSYTKSAAFIVTLHPLQNTTTDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGLQHYGPMEVEYVSGAADEDIVSRLFRVQNITRLQEGHLMVRHFQYLRWSAYRDTPDSKKSFLHLLAQVERWQKESGDGRTVVHCLNGGGRSGTYCASTMILEMLKCHNMADVFYAAKTLRNYKPNMVETLEQYHFCYDIALEYLESLETR
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2222541..2222603,2224867..2225002,2225588..2225745,2227827..2227952,2229892..2230032,2232083..2232256,2232369..2232518,2232858..2232993,2234241..2234395,2235213..2235329,2235423..2235520,2235785..2235821,2236241..2236258,2236726..2236802,2237363..2237435,2238586..2238776,2240279..2240436,2240999..2241028,2243213..2243351,2243980..2244016,2245620..2245893,2245982..2246084,2246358..2246559,2246880..2246989,2250083..2250391,2252620..2252913,2253504..2253678,2253819..2253934,2254656..2254737,2254907..2255178,2260561..2260594))
location: region:2222541-2260594:-1
so has part: feature:2260561-2260594:-1:exon
so has part: feature:2254907-2255178:-1:exon
so has part: feature:2254656-2254737:-1:exon
so has part: feature:2253819-2253934:-1:exon
so has part: feature:2253504-2253678:-1:exon
so has part: feature:2252620-2252913:-1:exon
so has part: feature:2250083-2250391:-1:exon
so has part: feature:2246880-2246989:-1:exon
so has part: feature:2246358-2246559:-1:exon
so has part: feature:2245982-2246084:-1:exon
so has part: feature:2245620-2245893:-1:exon
so has part: feature:2243980-2244016:-1:exon
so has part: feature:2243213-2243351:-1:exon
so has part: feature:2240999-2241028:-1:exon
so has part: feature:2240279-2240436:-1:exon
so has part: feature:2238586-2238776:-1:exon
so has part: feature:2237363-2237435:-1:exon
so has part: feature:2236726-2236802:-1:exon
so has part: feature:2236241-2236258:-1:exon
so has part: feature:2235785-2235821:-1:exon
so has part: feature:2235423-2235520:-1:exon
so has part: feature:2235213-2235329:-1:exon
so has part: feature:2234241-2234395:-1:exon
so has part: feature:2232858-2232993:-1:exon
so has part: feature:2232369-2232518:-1:exon
so has part: feature:2232083-2232256:-1:exon
so has part: feature:2229892-2230032:-1:exon
so has part: feature:2227827-2227952:-1:exon
so has part: feature:2225588-2225745:-1:exon
so has part: feature:2224867-2225002:-1:exon
so has part: feature:2222541-2222603:-1:exon

XP_035201519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2260561-2260594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2254907-2255178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2254656-2254737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253819-2253934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2253504-2253678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2252620-2252913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2250083-2250391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2246880-2246989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2246358-2246559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2245982-2246084:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2245620-2245893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2243980-2244016:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2243213-2243351:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2240999-2241028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2240279-2240436:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2238586-2238776:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2237363-2237435:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2236726-2236802:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2236241-2236258:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2235785-2235821:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2235423-2235520:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2235213-2235329:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2234241-2234395:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2232858-2232993:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2232369-2232518:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2232083-2232256:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2229892-2230032:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2227827-2227952:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2225588-2225745:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2224867-2225002:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2222541-2222603:-1:exon

SRSF4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: SRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2294453..2301729
location: region:2294453-2301729:1
so has part: feature:2294453-2301729:1:exon
subclass of: SO_0000010

118177682
type: Gene
SIO_000068: ncbigene

position:2294453:1
position: 2294453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2301729:1
position: 2301729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2294453-2301729:1:exon

SRSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SRSF4
product: serine and arginine rich splicing factor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_035345646.1
SIO_010081: SRSF4
subclass of: SO_0000673
so part of: SRSF4
location: join(2294453..2294693,2295863..2296005,2298736..2298950,2300044..2300127,2300286..2301729)
location: region:2294453-2301729:1
so has part: feature:2294453-2294693:1:exon
so has part: feature:2295863-2296005:1:exon
so has part: feature:2298736-2298950:1:exon
so has part: feature:2300044-2300127:1:exon
so has part: feature:2300286-2301729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2294453-2294693:1:exon

position:2294693:1
position: 2294693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2295863-2296005:1:exon

position:2295863:1
position: 2295863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296005:1
position: 2296005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2298736-2298950:1:exon

position:2298736:1
position: 2298736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2298950:1
position: 2298950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2300044-2300127:1:exon

position:2300044:1
position: 2300044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300127:1
position: 2300127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2300286-2301729:1:exon

position:2300286:1
position: 2300286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SRSF4
product: serine and arginine rich splicing factor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_035345645.1
SIO_010081: SRSF4
subclass of: SO_0000673
so part of: SRSF4
location: join(2294462..2294693,2295863..2296005,2296310..2296552,2296874..2296986,2298736..2298950,2300044..2300127,2300286..2301729)
location: region:2294462-2301729:1
so has part: feature:2294462-2294693:1:exon
so has part: feature:2295863-2296005:1:exon
so has part: feature:2296310-2296552:1:exon
so has part: feature:2296874-2296986:1:exon
so has part: feature:2298736-2298950:1:exon
so has part: feature:2300044-2300127:1:exon
so has part: feature:2300286-2301729:1:exon

position:2294462:1
position: 2294462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2294462-2294693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2295863-2296005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2296310-2296552:1:exon

position:2296310:1
position: 2296310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296552:1
position: 2296552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2296874-2296986:1:exon

position:2296874:1
position: 2296874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296986:1
position: 2296986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2298736-2298950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2300044-2300127:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2300286-2301729:1:exon

SRSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: SRSF4
product: serine and arginine rich splicing factor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035345643.1
SIO_010081: SRSF4
subclass of: SO_0000673
so part of: SRSF4
location: join(2295495..2295538,2295863..2296005,2296874..2296986,2298736..2298950,2300044..2300127,2300286..2301729)
location: region:2295495-2301729:1
so has part: feature:2295495-2295538:1:exon
so has part: feature:2295863-2296005:1:exon
so has part: feature:2296874-2296986:1:exon
so has part: feature:2298736-2298950:1:exon
so has part: feature:2300044-2300127:1:exon
so has part: feature:2300286-2301729:1:exon

position:2295495:1
position: 2295495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2295495-2295538:1:exon

position:2295538:1
position: 2295538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2295863-2296005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2296874-2296986:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2298736-2298950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2300044-2300127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2300286-2301729:1:exon

SRSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 4 isoform X1
translation: MEQEALQKSGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDSSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIRLVEDRPGSRRRRSYSRSRSHSRSRSRSRHSHKSRSRSASSSRSKSRSRSRSVSRSRSKSRSRSKSRSRGQKEKSRTPSKEDKSRSRSRSAEKSRNKSKDKSEGTVHNSDEKAKSRSRSKEKSKSRSRSGSKDRGETRGSLRSRSKEKSRSKDREKSISKARSRSKSRDESRSRSHSKDKRKSRKRSRDDSRSRSRSRSHSKSEKSKRRSKRDSKPSSKKKRKDSHERSRSVSKEKEHLKSEPDKKEAKGEAEDAAAHQVSRSRSRSISKSKPNVKSDSRSRSKSVSKPRSRSKSRSRSASRSHSRSRSRSRSRS
SIO_010081: SRSF4
subclass of: SO_0000673
so part of: SRSF4
location: join(2295510..2295538,2295863..2296005,2296874..2296986,2298736..2298950,2300044..2300127,2300286..2301081)
location: region:2295510-2301081:1
so has part: feature:2295510-2295538:1:exon
so has part: feature:2295863-2296005:1:exon
so has part: feature:2296874-2296986:1:exon
so has part: feature:2298736-2298950:1:exon
so has part: feature:2300044-2300127:1:exon
so has part: feature:2300286-2301081:1:exon

XP_035201534.1
type: Protein
SIO_000068: ncbiprotein

position:2295510:1
position: 2295510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2301081:1
position: 2301081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2295510-2295538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2295863-2296005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2296874-2296986:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2298736-2298950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2300044-2300127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2300286-2301081:1:exon

SRSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 4 isoform X3
translation: MPEAHGVTAVTVLDADYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIRLVEDRPGSRRRRSYSRSRSHSRSRSRSRHSHKSRSRSASSSRSKSRSRSRSVSRSRSKSRSRSKSRSRGQKEKSRTPSKEDKSRSRSRSAEKSRNKSKDKSEGTVHNSDEKAKSRSRSKEKSKSRSRSGSKDRGETRGSLRSRSKEKSRSKDREKSISKARSRSKSRDESRSRSHSKDKRKSRKRSRDDSRSRSRSRSHSKSEKSKRRSKRDSKPSSKKKRKDSHERSRSVSKEKEHLKSEPDKKEAKGEAEDAAAHQVSRSRSRSISKSKPNVKSDSRSRSKSVSKPRSRSKSRSRSASRSHSRSRSRSRSRS
SIO_010081: SRSF4
subclass of: SO_0000673
so part of: SRSF4
location: join(2295961..2296005,2298736..2298950,2300044..2300127,2300286..2301081)
location: region:2295961-2301081:1
so has part: feature:2295961-2296005:1:exon
so has part: feature:2298736-2298950:1:exon
so has part: feature:2300044-2300127:1:exon
so has part: feature:2300286-2301081:1:exon

XP_035201537.1
type: Protein
SIO_000068: ncbiprotein

position:2295961:1
position: 2295961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2295961-2296005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2298736-2298950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2300044-2300127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2300286-2301081:1:exon

SRSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: SRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 4 isoform X2
translation: MSNIQKTCKQCGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIRLVEDRPGSRRRRSYSRSRSHSRSRSRSRHSHKSRSRSASSSRSKSRSRSRSVSRSRSKSRSRSKSRSRGQKEKSRTPSKEDKSRSRSRSAEKSRNKSKDKSEGTVHNSDEKAKSRSRSKEKSKSRSRSGSKDRGETRGSLRSRSKEKSRSKDREKSISKARSRSKSRDESRSRSHSKDKRKSRKRSRDDSRSRSRSRSHSKSEKSKRRSKRDSKPSSKKKRKDSHERSRSVSKEKEHLKSEPDKKEAKGEAEDAAAHQVSRSRSRSISKSKPNVKSDSRSRSKSVSKPRSRSKSRSRSASRSHSRSRSRSRSRS
SIO_010081: SRSF4
subclass of: SO_0000673
so part of: SRSF4
location: join(2296522..2296552,2296874..2296986,2298736..2298950,2300044..2300127,2300286..2301081)
location: region:2296522-2301081:1
so has part: feature:2296522-2296552:1:exon
so has part: feature:2296874-2296986:1:exon
so has part: feature:2298736-2298950:1:exon
so has part: feature:2300044-2300127:1:exon
so has part: feature:2300286-2301081:1:exon

XP_035201536.1
type: Protein
SIO_000068: ncbiprotein

position:2296522:1
position: 2296522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296522-2296552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2296874-2296986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2298736-2298950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2300044-2300127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2300286-2301081:1:exon

LOC118177670
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2304988..2350415
location: region:2304988-2350415:1
so has part: feature:2304988-2350415:1:exon
subclass of: SO_0000010

118177670
type: Gene
SIO_000068: ncbigene

position:2304988:1
position: 2304988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2350415:1
position: 2350415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2304988-2350415:1:exon

LOC118177670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118177670
product: lethal(3)malignant brain tumor-like protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_035345621.1
SIO_010081: LOC118177670
subclass of: SO_0000673
so part of: LOC118177670
location: join(2304988..2305116,2317428..2317581,2320334..2320442,2320988..2321159,2322590..2322647,2323780..2323868,2325136..2325240,2325898..2326033,2326535..2326626,2327596..2327747,2329318..2329394,2330831..2330916,2334854..2334964,2336018..2336132,2336269..2336368,2337187..2337366,2338745..2338876,2339277..2339338,2341989..2342155,2346549..2346611,2349978..2350415)
location: region:2304988-2350415:1
so has part: feature:2304988-2305116:1:exon
so has part: feature:2317428-2317581:1:exon
so has part: feature:2320334-2320442:1:exon
so has part: feature:2320988-2321159:1:exon
so has part: feature:2322590-2322647:1:exon
so has part: feature:2323780-2323868:1:exon
so has part: feature:2325136-2325240:1:exon
so has part: feature:2325898-2326033:1:exon
so has part: feature:2326535-2326626:1:exon
so has part: feature:2327596-2327747:1:exon
so has part: feature:2329318-2329394:1:exon
so has part: feature:2330831-2330916:1:exon
so has part: feature:2334854-2334964:1:exon
so has part: feature:2336018-2336132:1:exon
so has part: feature:2336269-2336368:1:exon
so has part: feature:2337187-2337366:1:exon
so has part: feature:2338745-2338876:1:exon
so has part: feature:2339277-2339338:1:exon
so has part: feature:2341989-2342155:1:exon
so has part: feature:2346549-2346611:1:exon
so has part: feature:2349978-2350415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2304988-2305116:1:exon

position:2305116:1
position: 2305116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2317428-2317581:1:exon

position:2317428:1
position: 2317428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2317581:1
position: 2317581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2320334-2320442:1:exon

position:2320334:1
position: 2320334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2320442:1
position: 2320442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2320988-2321159:1:exon

position:2320988:1
position: 2320988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2321159:1
position: 2321159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2322590-2322647:1:exon

position:2322590:1
position: 2322590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2322647:1
position: 2322647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2323780-2323868:1:exon

position:2323780:1
position: 2323780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323868:1
position: 2323868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2325136-2325240:1:exon

position:2325136:1
position: 2325136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2325240:1
position: 2325240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2325898-2326033:1:exon

position:2325898:1
position: 2325898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2326033:1
position: 2326033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2326535-2326626:1:exon

position:2326535:1
position: 2326535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2326626:1
position: 2326626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2327596-2327747:1:exon

position:2327596:1
position: 2327596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2327747:1
position: 2327747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2329318-2329394:1:exon

position:2329318:1
position: 2329318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2329394:1
position: 2329394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2330831-2330916:1:exon

position:2330831:1
position: 2330831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2330916:1
position: 2330916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2334854-2334964:1:exon

position:2334854:1
position: 2334854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334964:1
position: 2334964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2336018-2336132:1:exon

position:2336018:1
position: 2336018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336132:1
position: 2336132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2336269-2336368:1:exon

position:2336269:1
position: 2336269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336368:1
position: 2336368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2337187-2337366:1:exon

position:2337187:1
position: 2337187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337366:1
position: 2337366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2338745-2338876:1:exon

position:2338745:1
position: 2338745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338876:1
position: 2338876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2339277-2339338:1:exon

position:2339277:1
position: 2339277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339338:1
position: 2339338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2341989-2342155:1:exon

position:2341989:1
position: 2341989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342155:1
position: 2342155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2346549-2346611:1:exon

position:2346549:1
position: 2346549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2346611:1
position: 2346611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2349978-2350415:1:exon

position:2349978:1
position: 2349978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118177670
product: lethal(3)malignant brain tumor-like protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_035345622.1
SIO_010081: LOC118177670
subclass of: SO_0000673
so part of: LOC118177670
location: join(2305008..2305116,2320334..2320442,2320988..2321159,2322590..2322647,2323780..2323868,2325136..2325240,2325898..2326033,2326535..2326626,2327596..2327747,2329318..2329394,2330831..2330916,2334854..2334964,2336018..2336132,2336269..2336368,2337187..2337366,2338745..2338876,2339277..2339338,2341989..2342155,2346549..2346611,2349978..2350415)
location: region:2305008-2350415:1
so has part: feature:2305008-2305116:1:exon
so has part: feature:2320334-2320442:1:exon
so has part: feature:2320988-2321159:1:exon
so has part: feature:2322590-2322647:1:exon
so has part: feature:2323780-2323868:1:exon
so has part: feature:2325136-2325240:1:exon
so has part: feature:2325898-2326033:1:exon
so has part: feature:2326535-2326626:1:exon
so has part: feature:2327596-2327747:1:exon
so has part: feature:2329318-2329394:1:exon
so has part: feature:2330831-2330916:1:exon
so has part: feature:2334854-2334964:1:exon
so has part: feature:2336018-2336132:1:exon
so has part: feature:2336269-2336368:1:exon
so has part: feature:2337187-2337366:1:exon
so has part: feature:2338745-2338876:1:exon
so has part: feature:2339277-2339338:1:exon
so has part: feature:2341989-2342155:1:exon
so has part: feature:2346549-2346611:1:exon
so has part: feature:2349978-2350415:1:exon

position:2305008:1
position: 2305008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2305008-2305116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2320334-2320442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2320988-2321159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322590-2322647:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2323780-2323868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2325136-2325240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325898-2326033:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2326535-2326626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2327596-2327747:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2329318-2329394:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2330831-2330916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2334854-2334964:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2336018-2336132:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2336269-2336368:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2337187-2337366:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2338745-2338876:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2339277-2339338:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2341989-2342155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2346549-2346611:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2349978-2350415:1:exon

LOC118177670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118177670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 4 isoform X2
translation: MRAAGRGSRLLPELRRKEKRGEGRGGRAGPGRAGPPFRLNEFGMLEIITEVEAEAIKTLSASAINASPTSFAPAAVNAPAASSTDLEVSKDNLPCSVFQTYGQMDCFENGKFCTQTGSQQHRDSDAKDIPDDCRNRGNSRNPNVSIGCQVNEVVRPAKRLRRKRRLLLESEDDEENADEDEEKNKSNNMKSRRNTKPIKQVVPAKKKVWNWVSYLEEERMPAAPLKLFREYQSFPQGRNGFKVGMKLEGLDPEHPSRFCVLTVAEVQGYRMRLHFDGYPECYDFWVNADSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWASYLKNCKAQAAPKSLFKTLSTPVTPSGFRLGMKLEAVDKKNPLLMCVATITDMVDNRLLVHFDNWDENYDYWCEASSPYIRPVGYCQETGTPLTVPPGYKDPKAFSWEKYLEETNSQAAPARAFKLRPAHGFQVNMKLEAVDKRNPILIRVATIIDKDDHRIKIHFDGWDRNYDFWVDADSPDVHPVGWCAKTGHALQVPLGAVDPVGTVGQACPTPGCHGIGHVRGPRYGTHYTLVGCPYSDVNLSRENLLQDRLSGERPSSGNSLQKAKRIETPAPVLLGTGESSQEDSPHSRKSAQDSEKSCQSSVRSLSEQSENNQEKDWIEEESSADIKAKPKKLGCSHAYIKFQLVKQENNGKDPDFDLQQALHQSIFMPSLTSNPTHRLHLCWEQHCKLLPEVSGLTAKHVAKWTVEEVVSFIQRLPGCKEQASVFREEQIDGEAFLLLNQTDIVKILSIKLGPALKIYNAILMFKSAEEE
SIO_010081: LOC118177670
subclass of: SO_0000673
so part of: LOC118177670
location: join(2305009..2305116,2317428..2317581,2320334..2320442,2320988..2321159,2322590..2322647,2323780..2323868,2325136..2325240,2325898..2326033,2326535..2326626,2327596..2327747,2329318..2329394,2330831..2330916,2334854..2334964,2336018..2336132,2336269..2336368,2337187..2337366,2338745..2338876,2339277..2339338,2341989..2342155,2346549..2346611,2349978..2350106)
location: region:2305009-2350106:1
so has part: feature:2305009-2305116:1:exon
so has part: feature:2317428-2317581:1:exon
so has part: feature:2320334-2320442:1:exon
so has part: feature:2320988-2321159:1:exon
so has part: feature:2322590-2322647:1:exon
so has part: feature:2323780-2323868:1:exon
so has part: feature:2325136-2325240:1:exon
so has part: feature:2325898-2326033:1:exon
so has part: feature:2326535-2326626:1:exon
so has part: feature:2327596-2327747:1:exon
so has part: feature:2329318-2329394:1:exon
so has part: feature:2330831-2330916:1:exon
so has part: feature:2334854-2334964:1:exon
so has part: feature:2336018-2336132:1:exon
so has part: feature:2336269-2336368:1:exon
so has part: feature:2337187-2337366:1:exon
so has part: feature:2338745-2338876:1:exon
so has part: feature:2339277-2339338:1:exon
so has part: feature:2341989-2342155:1:exon
so has part: feature:2346549-2346611:1:exon
so has part: feature:2349978-2350106:1:exon

XP_035201512.1
type: Protein
SIO_000068: ncbiprotein

position:2305009:1
position: 2305009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2350106:1
position: 2350106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2305009-2305116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2317428-2317581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2320334-2320442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2320988-2321159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2322590-2322647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2323780-2323868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325136-2325240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325898-2326033:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2326535-2326626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2327596-2327747:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2329318-2329394:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2330831-2330916:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2334854-2334964:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2336018-2336132:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2336269-2336368:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2337187-2337366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2338745-2338876:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2339277-2339338:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2341989-2342155:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2346549-2346611:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2349978-2350106:1:exon

LOC118177670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118177670
product: lethal(3)malignant brain tumor-like protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035345619.1
SIO_010081: LOC118177670
subclass of: SO_0000673
so part of: LOC118177670
location: join(2313999..2314148,2317428..2317581,2320334..2320442,2320988..2321159,2322590..2322647,2323780..2323868,2325136..2325240,2325898..2326033,2326535..2326626,2327596..2327747,2329318..2329394,2330831..2330916,2334854..2334964,2336018..2336132,2336269..2336368,2337187..2337366,2338745..2338876,2339277..2339338,2341989..2342155,2346549..2346611,2349978..2350415)
location: region:2313999-2350415:1
so has part: feature:2313999-2314148:1:exon
so has part: feature:2317428-2317581:1:exon
so has part: feature:2320334-2320442:1:exon
so has part: feature:2320988-2321159:1:exon
so has part: feature:2322590-2322647:1:exon
so has part: feature:2323780-2323868:1:exon
so has part: feature:2325136-2325240:1:exon
so has part: feature:2325898-2326033:1:exon
so has part: feature:2326535-2326626:1:exon
so has part: feature:2327596-2327747:1:exon
so has part: feature:2329318-2329394:1:exon
so has part: feature:2330831-2330916:1:exon
so has part: feature:2334854-2334964:1:exon
so has part: feature:2336018-2336132:1:exon
so has part: feature:2336269-2336368:1:exon
so has part: feature:2337187-2337366:1:exon
so has part: feature:2338745-2338876:1:exon
so has part: feature:2339277-2339338:1:exon
so has part: feature:2341989-2342155:1:exon
so has part: feature:2346549-2346611:1:exon
so has part: feature:2349978-2350415:1:exon

position:2313999:1
position: 2313999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2313999-2314148:1:exon

position:2314148:1
position: 2314148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2317428-2317581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2320334-2320442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2320988-2321159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2322590-2322647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2323780-2323868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325136-2325240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325898-2326033:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2326535-2326626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2327596-2327747:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2329318-2329394:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2330831-2330916:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2334854-2334964:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2336018-2336132:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2336269-2336368:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2337187-2337366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2338745-2338876:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2339277-2339338:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2341989-2342155:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2346549-2346611:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2349978-2350415:1:exon

LOC118177670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118177670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 4 isoform X1
translation: MEQNVSESIVTIPPADYDVLSALDWKDGIGTLPGSNIQFRLNEFGMLEIITEVEAEAIKTLSASAINASPTSFAPAAVNAPAASSTDLEVSKDNLPCSVFQTYGQMDCFENGKFCTQTGSQQHRDSDAKDIPDDCRNRGNSRNPNVSIGCQVNEVVRPAKRLRRKRRLLLESEDDEENADEDEEKNKSNNMKSRRNTKPIKQVVPAKKKVWNWVSYLEEERMPAAPLKLFREYQSFPQGRNGFKVGMKLEGLDPEHPSRFCVLTVAEVQGYRMRLHFDGYPECYDFWVNADSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWASYLKNCKAQAAPKSLFKTLSTPVTPSGFRLGMKLEAVDKKNPLLMCVATITDMVDNRLLVHFDNWDENYDYWCEASSPYIRPVGYCQETGTPLTVPPGYKDPKAFSWEKYLEETNSQAAPARAFKLRPAHGFQVNMKLEAVDKRNPILIRVATIIDKDDHRIKIHFDGWDRNYDFWVDADSPDVHPVGWCAKTGHALQVPLGAVDPVGTVGQACPTPGCHGIGHVRGPRYGTHYTLVGCPYSDVNLSRENLLQDRLSGERPSSGNSLQKAKRIETPAPVLLGTGESSQEDSPHSRKSAQDSEKSCQSSVRSLSEQSENNQEKDWIEEESSADIKAKPKKLGCSHAYIKFQLVKQENNGKDPDFDLQQALHQSIFMPSLTSNPTHRLHLCWEQHCKLLPEVSGLTAKHVAKWTVEEVVSFIQRLPGCKEQASVFREEQIDGEAFLLLNQTDIVKILSIKLGPALKIYNAILMFKSAEEE
SIO_010081: LOC118177670
subclass of: SO_0000673
so part of: LOC118177670
location: join(2314035..2314148,2317428..2317581,2320334..2320442,2320988..2321159,2322590..2322647,2323780..2323868,2325136..2325240,2325898..2326033,2326535..2326626,2327596..2327747,2329318..2329394,2330831..2330916,2334854..2334964,2336018..2336132,2336269..2336368,2337187..2337366,2338745..2338876,2339277..2339338,2341989..2342155,2346549..2346611,2349978..2350106)
location: region:2314035-2350106:1
so has part: feature:2314035-2314148:1:exon
so has part: feature:2317428-2317581:1:exon
so has part: feature:2320334-2320442:1:exon
so has part: feature:2320988-2321159:1:exon
so has part: feature:2322590-2322647:1:exon
so has part: feature:2323780-2323868:1:exon
so has part: feature:2325136-2325240:1:exon
so has part: feature:2325898-2326033:1:exon
so has part: feature:2326535-2326626:1:exon
so has part: feature:2327596-2327747:1:exon
so has part: feature:2329318-2329394:1:exon
so has part: feature:2330831-2330916:1:exon
so has part: feature:2334854-2334964:1:exon
so has part: feature:2336018-2336132:1:exon
so has part: feature:2336269-2336368:1:exon
so has part: feature:2337187-2337366:1:exon
so has part: feature:2338745-2338876:1:exon
so has part: feature:2339277-2339338:1:exon
so has part: feature:2341989-2342155:1:exon
so has part: feature:2346549-2346611:1:exon
so has part: feature:2349978-2350106:1:exon

XP_035201510.1
type: Protein
SIO_000068: ncbiprotein

position:2314035:1
position: 2314035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2314035-2314148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2317428-2317581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2320334-2320442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2320988-2321159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2322590-2322647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2323780-2323868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325136-2325240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325898-2326033:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2326535-2326626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2327596-2327747:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2329318-2329394:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2330831-2330916:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2334854-2334964:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2336018-2336132:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2336269-2336368:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2337187-2337366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2338745-2338876:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2339277-2339338:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2341989-2342155:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2346549-2346611:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2349978-2350106:1:exon

LOC118177670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118177670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 4 isoform X3
translation: MDCFENGKFCTQTGSQQHRDSDAKDIPDDCRNRGNSRNPNVSIGCQVNEVVRPAKRLRRKRRLLLESEDDEENADEDEEKNKSNNMKSRRNTKPIKQVVPAKKKVWNWVSYLEEERMPAAPLKLFREYQSFPQGRNGFKVGMKLEGLDPEHPSRFCVLTVAEVQGYRMRLHFDGYPECYDFWVNADSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWASYLKNCKAQAAPKSLFKTLSTPVTPSGFRLGMKLEAVDKKNPLLMCVATITDMVDNRLLVHFDNWDENYDYWCEASSPYIRPVGYCQETGTPLTVPPGYKDPKAFSWEKYLEETNSQAAPARAFKLRPAHGFQVNMKLEAVDKRNPILIRVATIIDKDDHRIKIHFDGWDRNYDFWVDADSPDVHPVGWCAKTGHALQVPLGAVDPVGTVGQACPTPGCHGIGHVRGPRYGTHYTLVGCPYSDVNLSRENLLQDRLSGERPSSGNSLQKAKRIETPAPVLLGTGESSQEDSPHSRKSAQDSEKSCQSSVRSLSEQSENNQEKDWIEEESSADIKAKPKKLGCSHAYIKFQLVKQENNGKDPDFDLQQALHQSIFMPSLTSNPTHRLHLCWEQHCKLLPEVSGLTAKHVAKWTVEEVVSFIQRLPGCKEQASVFREEQIDGEAFLLLNQTDIVKILSIKLGPALKIYNAILMFKSAEEE
SIO_010081: LOC118177670
subclass of: SO_0000673
so part of: LOC118177670
location: join(2320381..2320442,2320988..2321159,2322590..2322647,2323780..2323868,2325136..2325240,2325898..2326033,2326535..2326626,2327596..2327747,2329318..2329394,2330831..2330916,2334854..2334964,2336018..2336132,2336269..2336368,2337187..2337366,2338745..2338876,2339277..2339338,2341989..2342155,2346549..2346611,2349978..2350106)
location: region:2320381-2350106:1
so has part: feature:2320381-2320442:1:exon
so has part: feature:2320988-2321159:1:exon
so has part: feature:2322590-2322647:1:exon
so has part: feature:2323780-2323868:1:exon
so has part: feature:2325136-2325240:1:exon
so has part: feature:2325898-2326033:1:exon
so has part: feature:2326535-2326626:1:exon
so has part: feature:2327596-2327747:1:exon
so has part: feature:2329318-2329394:1:exon
so has part: feature:2330831-2330916:1:exon
so has part: feature:2334854-2334964:1:exon
so has part: feature:2336018-2336132:1:exon
so has part: feature:2336269-2336368:1:exon
so has part: feature:2337187-2337366:1:exon
so has part: feature:2338745-2338876:1:exon
so has part: feature:2339277-2339338:1:exon
so has part: feature:2341989-2342155:1:exon
so has part: feature:2346549-2346611:1:exon
so has part: feature:2349978-2350106:1:exon

XP_035201513.1
type: Protein
SIO_000068: ncbiprotein

position:2320381:1
position: 2320381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2320381-2320442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2320988-2321159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322590-2322647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2323780-2323868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2325136-2325240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2325898-2326033:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2326535-2326626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2327596-2327747:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2329318-2329394:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2330831-2330916:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2334854-2334964:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2336018-2336132:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2336269-2336368:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2337187-2337366:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2338745-2338876:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2339277-2339338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2341989-2342155:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2346549-2346611:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2349978-2350106:1:exon

LOC118177674
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2358569..2359130
location: region:2358569-2359130:1
so has part: feature:2358569-2359130:1:exon
subclass of: SO_0000011

118177674
type: Gene
SIO_000068: ncbigene

position:2358569:1
position: 2358569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2359130:1
position: 2359130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2358569-2359130:1:exon

LOC118177674
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177674
product: uncharacterized LOC118177674, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004755892.1
SIO_010081: LOC118177674
subclass of: SO_0000673
so part of: LOC118177674
location: join(2358569..2358823,2358937..2359130)
location: region:2358569-2359130:1
so has part: feature:2358569-2358823:1:exon
so has part: feature:2358937-2359130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2358569-2358823:1:exon

position:2358823:1
position: 2358823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2358937-2359130:1:exon

position:2358937:1
position: 2358937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118177674
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177674
product: uncharacterized LOC118177674, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004755893.1
SIO_010081: LOC118177674
subclass of: SO_0000673
so part of: LOC118177674
location: join(2358569..2358795,2358937..2359130)
location: region:2358569-2359130:1
so has part: feature:2358569-2358795:1:exon
so has part: feature:2358937-2359130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2358569-2358795:1:exon

position:2358795:1
position: 2358795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2358937-2359130:1:exon

LOC118177675
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118177675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2359601..2369942
location: region:2359601-2369942:1
so has part: feature:2359601-2369942:1:exon
subclass of: SO_0000011

118177675
type: Gene
SIO_000068: ncbigene

position:2359601:1
position: 2359601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2369942:1
position: 2369942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2359601-2369942:1:exon

LOC118177675
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118177675
product: uncharacterized LOC118177675
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004755894.1
SIO_010081: LOC118177675
subclass of: SO_0000673
so part of: LOC118177675
location: join(2359601..2359873,2369518..2369521,2369931..2369942)
location: region:2359601-2369942:1
so has part: feature:2359601-2359873:1:exon
so has part: feature:2369518-2369521:1:exon
so has part: feature:2369931-2369942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2359601-2359873:1:exon

position:2359873:1
position: 2359873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2369518-2369521:1:exon

position:2369518:1
position: 2369518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2369521:1
position: 2369521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2369931-2369942:1:exon

position:2369931:1
position: 2369931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM200B
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TMEM200B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2370753..2378825
location: region:2370753-2378825:1
so has part: feature:2370753-2378825:1:exon
subclass of: SO_0000010

118177671
type: Gene
SIO_000068: ncbigene

position:2370753:1
position: 2370753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378825:1
position: 2378825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2370753-2378825:1:exon

TMEM200B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMEM200B
product: transmembrane protein 200B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_035345624.1
SIO_010081: TMEM200B
subclass of: SO_0000673
so part of: TMEM200B
location: join(2370753..2370903,2377220..2378825)
location: region:2370753-2378825:1
so has part: feature:2370753-2370903:1:exon
so has part: feature:2377220-2378825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2370753-2370903:1:exon

position:2370903:1
position: 2370903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2377220-2378825:1:exon

position:2377220:1
position: 2377220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM200B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMEM200B
product: transmembrane protein 200B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035345625.1
SIO_010081: TMEM200B
subclass of: SO_0000673
so part of: TMEM200B
location: join(2371287..2371483,2377220..2378825)
location: region:2371287-2378825:1
so has part: feature:2371287-2371483:1:exon
so has part: feature:2377220-2378825:1:exon

position:2371287:1
position: 2371287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371287-2371483:1:exon

position:2371483:1
position: 2371483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2377220-2378825:1:exon

TMEM200B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMEM200B
product: transmembrane protein 200B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035345623.1
SIO_010081: TMEM200B
subclass of: SO_0000673
so part of: TMEM200B
location: join(2376734..2376786,2377000..2377100,2377135..2378825)
location: region:2376734-2378825:1
so has part: feature:2376734-2376786:1:exon
so has part: feature:2377000-2377100:1:exon
so has part: feature:2377135-2378825:1:exon

position:2376734:1
position: 2376734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2376734-2376786:1:exon

position:2376786:1
position: 2376786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2377000-2377100:1:exon

position:2377000:1
position: 2377000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377100:1
position: 2377100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2377135-2378825:1:exon

position:2377135:1
position: 2377135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM200B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMEM200B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 200B isoform X1
translation: MFTASQCPRGPHVPTIPCTWTPRPSSDFSISLSPLLPPHLAGGAARRATMTAESAEPNGPVREPAPGATKPTAPPAPPRRRGRRLRRKSPPEVPVKGQLRMRSPSGAFVMVGISVVLVGMTIAVVGYWPHRGHGGAGAGAGNASTAGDMRREVAAGRPVPHSEKLKLIGPVIMGIGLFIFICANTMLYENRDMETRMLMQKGLYCMATGLPEGTGPEEADSPLAPKASPECLEGCYEVDLSLGSKWADCYGPNRLQTTAELLQRPGASPTASLLSLHSEGNLRLSSAVGALALPIIKLNNRLLDAASRGARAPVEAAEPPAEAPQPPWALLSPGGRNVTPRGQEHRGGHVIVTVEEGCPMAELGPDAQPHNPGHSKSLDLGRPGMLLVAPIKDRKNRSWPRLDHVTPGAYAKLENRGESSDRLLEPGETPRRAEPRPSSWAVGVEGGSRV
SIO_010081: TMEM200B
subclass of: SO_0000673
so part of: TMEM200B
location: join(2377062..2377100,2377135..2378448)
location: region:2377062-2378448:1
so has part: feature:2377062-2377100:1:exon
so has part: feature:2377135-2378448:1:exon

XP_035201514.1
type: Protein
SIO_000068: ncbiprotein

position:2377062:1
position: 2377062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378448:1
position: 2378448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2377062-2377100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377135-2378448:1:exon

TMEM200B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMEM200B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 200B isoform X2
translation: MTAESAEPNGPVREPAPGATKPTAPPAPPRRRGRRLRRKSPPEVPVKGQLRMRSPSGAFVMVGISVVLVGMTIAVVGYWPHRGHGGAGAGAGNASTAGDMRREVAAGRPVPHSEKLKLIGPVIMGIGLFIFICANTMLYENRDMETRMLMQKGLYCMATGLPEGTGPEEADSPLAPKASPECLEGCYEVDLSLGSKWADCYGPNRLQTTAELLQRPGASPTASLLSLHSEGNLRLSSAVGALALPIIKLNNRLLDAASRGARAPVEAAEPPAEAPQPPWALLSPGGRNVTPRGQEHRGGHVIVTVEEGCPMAELGPDAQPHNPGHSKSLDLGRPGMLLVAPIKDRKNRSWPRLDHVTPGAYAKLENRGESSDRLLEPGETPRRAEPRPSSWAVGVEGGSRV
SIO_010081: TMEM200B
subclass of: SO_0000673
so part of: TMEM200B
location: 2377243..2378448
location: region:2377243-2378448:1
so has part: feature:2377243-2378448:1:exon

XP_035201515.1
type: Protein
SIO_000068: ncbiprotein

position:2377243:1
position: 2377243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2377243-2378448:1:exon

TMEM200B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMEM200B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 200B isoform X2
translation: MTAESAEPNGPVREPAPGATKPTAPPAPPRRRGRRLRRKSPPEVPVKGQLRMRSPSGAFVMVGISVVLVGMTIAVVGYWPHRGHGGAGAGAGNASTAGDMRREVAAGRPVPHSEKLKLIGPVIMGIGLFIFICANTMLYENRDMETRMLMQKGLYCMATGLPEGTGPEEADSPLAPKASPECLEGCYEVDLSLGSKWADCYGPNRLQTTAELLQRPGASPTASLLSLHSEGNLRLSSAVGALALPIIKLNNRLLDAASRGARAPVEAAEPPAEAPQPPWALLSPGGRNVTPRGQEHRGGHVIVTVEEGCPMAELGPDAQPHNPGHSKSLDLGRPGMLLVAPIKDRKNRSWPRLDHVTPGAYAKLENRGESSDRLLEPGETPRRAEPRPSSWAVGVEGGSRV
SIO_010081: TMEM200B
subclass of: SO_0000673
so part of: TMEM200B
location: 2377243..2378448
location: region:2377243-2378448:1
so has part: feature:2377243-2378448:1:exon

XP_035201516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2377243-2378448:1:exon

EPB41
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2384999..2467088)
location: region:2384999-2467088:-1
so has part: feature:2384999-2467088:-1:exon
subclass of: SO_0000010

118177669
type: Gene
SIO_000068: ncbigene

position:2384999:-1
position: 2384999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2467088:-1
position: 2467088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2384999-2467088:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035345593.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2384999..2388716,2389509..2389616,2390802..2390882,2391373..2391474,2393009..2393137,2394319..2394825,2406543..2406593,2408295..2408474,2411202..2411264,2412088..2412132,2412243..2412299,2414127..2414338,2416511..2416642,2417859..2417975,2418756..2418928,2419276..2419373,2419864..2420016,2420585..2420672,2422883..2423101,2423652..2423727,2425882..2425924,2429163..2429267,2431529..2431759,2434213..2434646,2466997..2467088))
location: region:2384999-2467088:-1
so has part: feature:2466997-2467088:-1:exon
so has part: feature:2434213-2434646:-1:exon
so has part: feature:2431529-2431759:-1:exon
so has part: feature:2429163-2429267:-1:exon
so has part: feature:2425882-2425924:-1:exon
so has part: feature:2423652-2423727:-1:exon
so has part: feature:2422883-2423101:-1:exon
so has part: feature:2420585-2420672:-1:exon
so has part: feature:2419864-2420016:-1:exon
so has part: feature:2419276-2419373:-1:exon
so has part: feature:2418756-2418928:-1:exon
so has part: feature:2417859-2417975:-1:exon
so has part: feature:2416511-2416642:-1:exon
so has part: feature:2414127-2414338:-1:exon
so has part: feature:2412243-2412299:-1:exon
so has part: feature:2412088-2412132:-1:exon
so has part: feature:2411202-2411264:-1:exon
so has part: feature:2408295-2408474:-1:exon
so has part: feature:2406543-2406593:-1:exon
so has part: feature:2394319-2394825:-1:exon
so has part: feature:2393009-2393137:-1:exon
so has part: feature:2391373-2391474:-1:exon
so has part: feature:2390802-2390882:-1:exon
so has part: feature:2389509-2389616:-1:exon
so has part: feature:2384999-2388716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2466997-2467088:-1:exon

position:2466997:-1
position: 2466997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2434213-2434646:-1:exon

position:2434213:-1
position: 2434213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2434646:-1
position: 2434646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2431529-2431759:-1:exon

position:2431529:-1
position: 2431529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2431759:-1
position: 2431759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2429163-2429267:-1:exon

position:2429163:-1
position: 2429163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2429267:-1
position: 2429267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2425882-2425924:-1:exon

position:2425882:-1
position: 2425882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2425924:-1
position: 2425924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2423652-2423727:-1:exon

position:2423652:-1
position: 2423652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2423727:-1
position: 2423727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2422883-2423101:-1:exon

position:2422883:-1
position: 2422883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2423101:-1
position: 2423101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2420585-2420672:-1:exon

position:2420585:-1
position: 2420585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420672:-1
position: 2420672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2419864-2420016:-1:exon

position:2419864:-1
position: 2419864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420016:-1
position: 2420016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2419276-2419373:-1:exon

position:2419276:-1
position: 2419276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2419373:-1
position: 2419373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2418756-2418928:-1:exon

position:2418756:-1
position: 2418756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2418928:-1
position: 2418928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2417859-2417975:-1:exon

position:2417859:-1
position: 2417859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2417975:-1
position: 2417975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2416511-2416642:-1:exon

position:2416511:-1
position: 2416511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2416642:-1
position: 2416642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2414127-2414338:-1:exon

position:2414127:-1
position: 2414127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2414338:-1
position: 2414338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2412243-2412299:-1:exon

position:2412243:-1
position: 2412243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2412299:-1
position: 2412299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2412088-2412132:-1:exon

position:2412088:-1
position: 2412088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2412132:-1
position: 2412132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2411202-2411264:-1:exon

position:2411202:-1
position: 2411202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2411264:-1
position: 2411264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2408295-2408474:-1:exon

position:2408295:-1
position: 2408295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408474:-1
position: 2408474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2406543-2406593:-1:exon

position:2406543:-1
position: 2406543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406593:-1
position: 2406593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2394319-2394825:-1:exon

position:2394319:-1
position: 2394319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2394825:-1
position: 2394825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2393009-2393137:-1:exon

position:2393009:-1
position: 2393009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393137:-1
position: 2393137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2391373-2391474:-1:exon

position:2391373:-1
position: 2391373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2391474:-1
position: 2391474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2390802-2390882:-1:exon

position:2390802:-1
position: 2390802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390882:-1
position: 2390882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2389509-2389616:-1:exon

position:2389509:-1
position: 2389509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389616:-1
position: 2389616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2384999-2388716:-1:exon

position:2388716:-1
position: 2388716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035345584.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2384999..2388716,2389509..2389616,2390802..2390882,2391373..2391474,2393009..2393137,2394319..2394825,2406543..2406593,2408295..2408474,2411202..2411264,2412243..2412299,2414127..2414338,2416511..2416642,2417859..2417975,2418756..2418928,2419276..2419373,2419864..2420016,2420585..2420672,2422883..2423101,2423652..2423727,2425882..2425924,2429163..2429267,2431529..2431759,2434213..2434663,2459371..2459503))
location: region:2384999-2459503:-1
so has part: feature:2459371-2459503:-1:exon
so has part: feature:2434213-2434663:-1:exon
so has part: feature:2431529-2431759:-1:exon
so has part: feature:2429163-2429267:-1:exon
so has part: feature:2425882-2425924:-1:exon
so has part: feature:2423652-2423727:-1:exon
so has part: feature:2422883-2423101:-1:exon
so has part: feature:2420585-2420672:-1:exon
so has part: feature:2419864-2420016:-1:exon
so has part: feature:2419276-2419373:-1:exon
so has part: feature:2418756-2418928:-1:exon
so has part: feature:2417859-2417975:-1:exon
so has part: feature:2416511-2416642:-1:exon
so has part: feature:2414127-2414338:-1:exon
so has part: feature:2412243-2412299:-1:exon
so has part: feature:2411202-2411264:-1:exon
so has part: feature:2408295-2408474:-1:exon
so has part: feature:2406543-2406593:-1:exon
so has part: feature:2394319-2394825:-1:exon
so has part: feature:2393009-2393137:-1:exon
so has part: feature:2391373-2391474:-1:exon
so has part: feature:2390802-2390882:-1:exon
so has part: feature:2389509-2389616:-1:exon
so has part: feature:2384999-2388716:-1:exon

position:2459503:-1
position: 2459503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2459371-2459503:-1:exon

position:2459371:-1
position: 2459371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2434213-2434663:-1:exon

position:2434663:-1
position: 2434663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2431529-2431759:-1:exon

urn:…
SIO_000300: 4
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035345582.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2384999..2388716,2389509..2389616,2390802..2390882,2391373..2391474,2393009..2393137,2394319..2394825,2406543..2406593,2408295..2408474,2411202..2411264,2412088..2412129,2412243..2412299,2414127..2414338,2416511..2416642,2417859..2417975,2418756..2418928,2419276..2419373,2419864..2420016,2420585..2420672,2422883..2423101,2423652..2423727,2425882..2425924,2429163..2429267,2431529..2431759,2434213..2434663,2459371..2459503))
location: region:2384999-2459503:-1
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position:2412129:-1
position: 2412129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035345585.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2384999..2388716,2389509..2389616,2390802..2390882,2391373..2391474,2393009..2393137,2394319..2394825,2408295..2408474,2411202..2411264,2412088..2412132,2412243..2412299,2414127..2414338,2416511..2416642,2417859..2417975,2418756..2418928,2419276..2419373,2419864..2420016,2420585..2420672,2422883..2423101,2423652..2423727,2425882..2425924,2429163..2429267,2431529..2431759,2434213..2434663,2459371..2459503))
location: region:2384999-2459503:-1
so has part: feature:2459371-2459503:-1:exon
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urn:…
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035345583.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2384999..2388716,2389509..2389616,2390802..2390882,2391373..2391474,2393009..2393137,2394319..2394825,2406558..2406593,2408295..2408474,2411202..2411264,2412088..2412132,2412243..2412299,2414127..2414338,2416511..2416642,2417859..2417975,2418756..2418928,2419276..2419373,2419864..2420016,2420585..2420672,2422883..2423101,2423652..2423727,2425882..2425924,2429163..2429267,2431529..2431759,2434213..2434663,2459371..2459503))
location: region:2384999-2459503:-1
so has part: feature:2459371-2459503:-1:exon
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position:2406558:-1
position: 2406558
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type: ReverseStrandPosition
type: ExactPosition

urn:…
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035345581.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2384999..2388716,2389509..2389616,2390802..2390882,2391373..2391474,2393009..2393137,2394319..2394825,2406543..2406593,2408295..2408474,2411202..2411264,2412088..2412132,2412243..2412299,2414127..2414338,2416511..2416642,2417859..2417975,2418756..2418928,2419276..2419373,2419864..2420016,2420585..2420672,2422883..2423101,2423652..2423727,2425882..2425924,2429163..2429267,2431529..2431759,2434213..2434663,2459371..2459503))
location: region:2384999-2459503:-1
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urn:…
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urn:…
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035345590.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
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position:2459502:-1
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type: ReverseStrandPosition
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035345589.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
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location: region:2384999-2459502:-1
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_035345587.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
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location: region:2384999-2459502:-1
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035345591.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
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location: region:2384999-2459501:-1
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position:2459501:-1
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type: ReverseStrandPosition
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