Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 16, BPBGC_Ojam_1.0, whole genome shotgun sequence.
type: Entry
definition: Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 16, BPBGC_Ojam_1.0, whole genome shotgun sequence.
sequence version: NC_048908.1
sequence date: 2020-07-05
sequence: sequence
division: CON
label: NC_048908.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA641662
dblink: SAMN13257492
keyword: WGS
keyword: RefSeq
source: Oxyura jamaicensis (ruddy duck)
organism: Oxyura jamaicensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021814.1.\nAssembly name: BPBGC_Ojam_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2020/03/10. The original whole-genome shotgun project\nhas the accession JAACYN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Date :: 01-SEP-2019\nAssembly Method :: Supernova 2 v. SEPT-2019\nAssembly Name :: BPBGC_Ojam_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Oxyura jamaicensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 374285
topology: linear
so has quality: SO_0000987
location: 1..374285
location: region:1-374285:1
RO_0002162: 8884

NC_048908
type: RefSeq
SIO_000068: refseq

PRJNA641662
type: BioProject
SIO_000068: bioproject

SAMN13257492
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374285:1
position: 374285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-374285:1:source
so part of: sequence
organism: Oxyura jamaicensis
mol type: genomic DNA
isolate: SHBP4307
chromosome: 16
sex: female
tissue type: blood
dev stage: adult
country: USA: Scotland Neck, NC
breed: ruddy duck

8884
type: Taxonomy
SIO_000068: taxonomy

TAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 500..4125
location: region:500-4125:1
so has part: feature:500-4125:1:exon
subclass of: SO_0000010

118175211
type: Gene
SIO_000068: ncbigene

position:500:1
position: 500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4125:1
position: 4125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500-4125:1:exon

TAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TAP2
product: transporter 2, ATP binding cassette subfamily B member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035341210.1
SIO_010081: TAP2
subclass of: SO_0000673
so part of: TAP2
location: join(500..1603,1693..1823,1902..2107,2491..2688,2761..2889,3003..3365,3442..3601,3669..3805,3882..4125)
location: region:500-4125:1
so has part: feature:500-1603:1:exon
so has part: feature:1693-1823:1:exon
so has part: feature:1902-2107:1:exon
so has part: feature:2491-2688:1:exon
so has part: feature:2761-2889:1:exon
so has part: feature:3003-3365:1:exon
so has part: feature:3442-3601:1:exon
so has part: feature:3669-3805:1:exon
so has part: feature:3882-4125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500-1603:1:exon

position:1603:1
position: 1603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1693-1823:1:exon

position:1693:1
position: 1693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1823:1
position: 1823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1902-2107:1:exon

position:1902:1
position: 1902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2107:1
position: 2107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2491-2688:1:exon

position:2491:1
position: 2491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2688:1
position: 2688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2761-2889:1:exon

position:2761:1
position: 2761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889:1
position: 2889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3003-3365:1:exon

position:3003:1
position: 3003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3365:1
position: 3365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3442-3601:1:exon

position:3442:1
position: 3442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3601:1
position: 3601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3669-3805:1:exon

position:3669:1
position: 3669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3805:1
position: 3805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3882-4125:1:exon

position:3882:1
position: 3882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 2
translation: MELLPTLRLAIVLLLADLVVLAALARLAPALAQLGLVATWLEAGLRLPVLVGAGRLLAPGGPRGAAALVSLTPATFLTLRGFLELPGAPPVLLAMATPSWLALAYGAALLALLTWTSLAPGVALGNKEAKYQAALRRQLALAWPEWPFLGGAFFFLVLAALGETSVPYCTGRALDVLRRGDGPTAFATAIGFVCLASASSSLFAGCRGGLFTFIMARLTLRTRDQLFSGLVHQDLAFFQQTTAADLASRLATDVPLASKVVPSNANIALRSLGKVLGLSAFMLALSPRLTLLALLEVPLAIVARKVYNARHQMLQQAVLDATAGTGVVVQEAISSIETVRAFAGEEEEERRYGQALTKMLRLRDQRDMEKAIFLLIQRALQLAVQVLVLYCGHQQLREGTLTAGGLIAFILYQNNAGSSVQALAYAYGDLLSNLAAAHKIFDYLDREPAGGTGGTWEPATLQGHVAFQHVSFAYPTRPEHLVLQDVSFELRPGEVTALAGLNGSGKSTCAGLLQRFYEPTAGEVLLDGVPLRDYEHRYLHRQVALVGQEPVLFSGSIRDNIAYGLEGCREEEIVAAAEAAGALGFISALDQGFDTDVGERGDQLSAGQKQRVAIARALVRCPAVLILDEATSALDGDGDVALQQWVQSAGDRTVLLITHHPRMLEKADRVVVLECGTVAETGTPAELAARGGPYSRLLQR
SIO_010081: TAP2
subclass of: SO_0000673
so part of: TAP2
location: join(1005..1603,1693..1823,1902..2107,2491..2688,2761..2889,3003..3365,3442..3601,3669..3805,3882..4061)
location: region:1005-4061:1
so has part: feature:1005-1603:1:exon
so has part: feature:1693-1823:1:exon
so has part: feature:1902-2107:1:exon
so has part: feature:2491-2688:1:exon
so has part: feature:2761-2889:1:exon
so has part: feature:3003-3365:1:exon
so has part: feature:3442-3601:1:exon
so has part: feature:3669-3805:1:exon
so has part: feature:3882-4061:1:exon

XP_035197101.1
type: Protein
SIO_000068: ncbiprotein

position:1005:1
position: 1005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061:1
position: 4061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1005-1603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1693-1823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1902-2107:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2491-2688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2761-2889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3003-3365:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3442-3601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3669-3805:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3882-4061:1:exon

LOC118175210
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5742..8509)
location: region:5742-8509:-1
so has part: feature:5742-8509:-1:exon
subclass of: SO_0000010

118175210
type: Gene
SIO_000068: ncbigene

position:5742:-1
position: 5742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8509:-1
position: 8509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5742-8509:-1:exon

LOC118175210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175210
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 189 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_035341208.1
SIO_010081: LOC118175210
subclass of: SO_0000673
so part of: LOC118175210
location: complement(join(5742..5934,6341..6373,6524..6628,6712..6984,7073..7348,7979..8242,8350..8509))
location: region:5742-8509:-1
so has part: feature:8350-8509:-1:exon
so has part: feature:7979-8242:-1:exon
so has part: feature:7073-7348:-1:exon
so has part: feature:6712-6984:-1:exon
so has part: feature:6524-6628:-1:exon
so has part: feature:6341-6373:-1:exon
so has part: feature:5742-5934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8350-8509:-1:exon

position:8350:-1
position: 8350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7979-8242:-1:exon

position:7979:-1
position: 7979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8242:-1
position: 8242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7073-7348:-1:exon

position:7073:-1
position: 7073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7348:-1
position: 7348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6712-6984:-1:exon

position:6712:-1
position: 6712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6984:-1
position: 6984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6524-6628:-1:exon

position:6524:-1
position: 6524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6628:-1
position: 6628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6341-6373:-1:exon

position:6341:-1
position: 6341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6373:-1
position: 6373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5742-5934:-1:exon

position:5934:-1
position: 5934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175210
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 239 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_035341207.1
SIO_010081: LOC118175210
subclass of: SO_0000673
so part of: LOC118175210
location: complement(join(5742..5934,6136..6168,6341..6373,6524..6628,6712..6984,7073..7348,7979..8242,8350..8509))
location: region:5742-8509:-1
so has part: feature:8350-8509:-1:exon
so has part: feature:7979-8242:-1:exon
so has part: feature:7073-7348:-1:exon
so has part: feature:6712-6984:-1:exon
so has part: feature:6524-6628:-1:exon
so has part: feature:6341-6373:-1:exon
so has part: feature:6136-6168:-1:exon
so has part: feature:5742-5934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8350-8509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7979-8242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7073-7348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6712-6984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6524-6628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6341-6373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6136-6168:-1:exon

position:6136:-1
position: 6136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6168:-1
position: 6168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5742-5934:-1:exon

LOC118175210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175210
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_035341209.1
SIO_010081: LOC118175210
subclass of: SO_0000673
so part of: LOC118175210
location: complement(join(5742..5934,6136..6168,6341..6373,6507..6628,6712..6984,7073..7348,7979..8242,8350..8509))
location: region:5742-8509:-1
so has part: feature:8350-8509:-1:exon
so has part: feature:7979-8242:-1:exon
so has part: feature:7073-7348:-1:exon
so has part: feature:6712-6984:-1:exon
so has part: feature:6507-6628:-1:exon
so has part: feature:6341-6373:-1:exon
so has part: feature:6136-6168:-1:exon
so has part: feature:5742-5934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8350-8509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7979-8242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7073-7348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6712-6984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6507-6628:-1:exon

position:6507:-1
position: 6507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6341-6373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6136-6168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5742-5934:-1:exon

LOC118175210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X2
translation: MPSSSAGSSGHSATMGPGRARVLALGLLLGVLGGAASEPHSLRYFYTSVSEPGLGLPQFVTVGYVDGEIFVRYDSETRRTDAMMDWMAAIDDPQYWERNTQIFQNSEQIFRMGLDTLRERYNQSRGFHTWQRMYGCDLLEDGSIRGFDQYGYEGRDFIAFDKDTLTFTAADAGAQVTKRKQEEEGTYAERMKHYLENTCIEWLRKYVSYGKAVLERRERPEVRISGTEAGKTLTLSCRAHGFYPRPIVISWLKDGMVQEQETQRGSIVPNNDGTYHAWATIDVPLEDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVVAVIVVAIILALAGFAVWKSKQGKKEKGYNIAPGSNPSV
SIO_010081: LOC118175210
subclass of: SO_0000673
so part of: LOC118175210
location: complement(join(5915..5934,6341..6373,6524..6628,6712..6984,7073..7348,7979..8242,8350..8461))
location: region:5915-8461:-1
so has part: feature:8350-8461:-1:exon
so has part: feature:7979-8242:-1:exon
so has part: feature:7073-7348:-1:exon
so has part: feature:6712-6984:-1:exon
so has part: feature:6524-6628:-1:exon
so has part: feature:6341-6373:-1:exon
so has part: feature:5915-5934:-1:exon

XP_035197099.1
type: Protein
SIO_000068: ncbiprotein

position:5915:-1
position: 5915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8461:-1
position: 8461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8350-8461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7979-8242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7073-7348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6712-6984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6524-6628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6341-6373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5915-5934:-1:exon

LOC118175210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X1
translation: MPSSSAGSSGHSATMGPGRARVLALGLLLGVLGGAASEPHSLRYFYTSVSEPGLGLPQFVTVGYVDGEIFVRYDSETRRTDAMMDWMAAIDDPQYWERNTQIFQNSEQIFRMGLDTLRERYNQSRGFHTWQRMYGCDLLEDGSIRGFDQYGYEGRDFIAFDKDTLTFTAADAGAQVTKRKQEEEGTYAERMKHYLENTCIEWLRKYVSYGKAVLERRERPEVRISGTEAGKTLTLSCRAHGFYPRPIVISWLKDGMVQEQETQRGSIVPNNDGTYHAWATIDVPLEDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVVAVIVVAIILALAGFAVWKSKQGKKEKGYNIAPGNDGGSNSSNTGSNPSV
SIO_010081: LOC118175210
subclass of: SO_0000673
so part of: LOC118175210
location: complement(join(5915..5934,6136..6168,6341..6373,6524..6628,6712..6984,7073..7348,7979..8242,8350..8461))
location: region:5915-8461:-1
so has part: feature:8350-8461:-1:exon
so has part: feature:7979-8242:-1:exon
so has part: feature:7073-7348:-1:exon
so has part: feature:6712-6984:-1:exon
so has part: feature:6524-6628:-1:exon
so has part: feature:6341-6373:-1:exon
so has part: feature:6136-6168:-1:exon
so has part: feature:5915-5934:-1:exon

XP_035197098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8350-8461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7979-8242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7073-7348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6712-6984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6524-6628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6341-6373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6136-6168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5915-5934:-1:exon

LOC118175210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X3
translation: MPSSSAGSSGHSATMGPGRARVLALGLLLGVLGGAASEPHSLRYFYTSVSEPGLGLPQFVTVGYVDGEIFVRYDSETRRTDAMMDWMAAIDDPQYWERNTQIFQNSEQIFRMGLDTLRERYNQSRGFHTWQRMYGCDLLEDGSIRGFDQYGYEGRDFIAFDKDTLTFTAADAGAQVTKRKQEEEGTYAERMKHYLENTCIEWLRKYVSYGKAVLERRERPEVRISGTEAGKTLTLSCRAHGFYPRPIVISWLKDGMVQEQETQRGSIVPNNDGTYHAWATIDVPLEDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVVAVIVVAIILALAGFAVWKSKQGKVPGRGRKRRATT
SIO_010081: LOC118175210
subclass of: SO_0000673
so part of: LOC118175210
location: complement(join(6347..6373,6507..6628,6712..6984,7073..7348,7979..8242,8350..8461))
location: region:6347-8461:-1
so has part: feature:8350-8461:-1:exon
so has part: feature:7979-8242:-1:exon
so has part: feature:7073-7348:-1:exon
so has part: feature:6712-6984:-1:exon
so has part: feature:6507-6628:-1:exon
so has part: feature:6347-6373:-1:exon

XP_035197100.1
type: Protein
SIO_000068: ncbiprotein

position:6347:-1
position: 6347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8350-8461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7979-8242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7073-7348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6712-6984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6507-6628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6347-6373:-1:exon

LOC118175214
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64292..66899)
location: region:64292-66899:-1
so has part: feature:64292-66899:-1:exon
subclass of: SO_0000010

118175214
type: Gene
SIO_000068: ncbigene

position:64292:-1
position: 64292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66899:-1
position: 66899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64292-66899:-1:exon

LOC118175214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175214
product: T-cell surface glycoprotein CD1b-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035341216.1
SIO_010081: LOC118175214
subclass of: SO_0000673
so part of: LOC118175214
location: complement(join(64292..64861,64950..65040,65117..65401,65515..65796,66006..66263,66465..66899))
location: region:64292-66899:-1
so has part: feature:66465-66899:-1:exon
so has part: feature:66006-66263:-1:exon
so has part: feature:65515-65796:-1:exon
so has part: feature:65117-65401:-1:exon
so has part: feature:64950-65040:-1:exon
so has part: feature:64292-64861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66465-66899:-1:exon

position:66465:-1
position: 66465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66006-66263:-1:exon

position:66006:-1
position: 66006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66263:-1
position: 66263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65515-65796:-1:exon

position:65515:-1
position: 65515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65796:-1
position: 65796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65117-65401:-1:exon

position:65117:-1
position: 65117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65401:-1
position: 65401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64950-65040:-1:exon

position:64950:-1
position: 64950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65040:-1
position: 65040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64292-64861:-1:exon

position:64861:-1
position: 64861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175214
product: T-cell surface glycoprotein CD1b-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035341215.1
SIO_010081: LOC118175214
subclass of: SO_0000673
so part of: LOC118175214
location: complement(join(64292..64861,64950..65040,65117..65401,65515..65796,66006..66266,66465..66899))
location: region:64292-66899:-1
so has part: feature:66465-66899:-1:exon
so has part: feature:66006-66266:-1:exon
so has part: feature:65515-65796:-1:exon
so has part: feature:65117-65401:-1:exon
so has part: feature:64950-65040:-1:exon
so has part: feature:64292-64861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66465-66899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66006-66266:-1:exon

position:66266:-1
position: 66266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65515-65796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65117-65401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64950-65040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64292-64861:-1:exon

LOC118175214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175214
product: T-cell surface glycoprotein CD1b-3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035341217.1
SIO_010081: LOC118175214
subclass of: SO_0000673
so part of: LOC118175214
location: complement(join(64292..64861,64950..65040,65117..65401,65515..65796,66006..66286,66465..66899))
location: region:64292-66899:-1
so has part: feature:66465-66899:-1:exon
so has part: feature:66006-66286:-1:exon
so has part: feature:65515-65796:-1:exon
so has part: feature:65117-65401:-1:exon
so has part: feature:64950-65040:-1:exon
so has part: feature:64292-64861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66465-66899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66006-66286:-1:exon

position:66286:-1
position: 66286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65515-65796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65117-65401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64950-65040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64292-64861:-1:exon

LOC118175214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X2
translation: MQPRCLLLFPFLFFPGTWAEPEGSPMLQLRHFVTFQNATSMQVGGLGLVGDINIGCVDRRTWDIHYHQPWLRPALPKGDWDVIESSIKSYLRDFNSLVQTLITHTSMSFPFVFQSSIGCKLQPNGTTRTYLVIGYEGQDLLRFHLIKGTWDRVPDNEVSAAAEHFLNNATTLNELIQVLLNVTCVDILERFTEYGRADLERQEPPTATVFARTAGPAQLLLVCRITGFYPRPISVAWLRDGHEVPPGPALNTSAVLPNADLTYQVYSVLTVAPRDGHSYACRVRHRSLGTRSLLVPWGKSNAGLIAGLGVALLAAVVVSGALWVWRRRKCH
SIO_010081: LOC118175214
subclass of: SO_0000673
so part of: LOC118175214
location: complement(join(64849..64861,64950..65040,65117..65401,65515..65796,66006..66263,66465..66531))
location: region:64849-66531:-1
so has part: feature:66465-66531:-1:exon
so has part: feature:66006-66263:-1:exon
so has part: feature:65515-65796:-1:exon
so has part: feature:65117-65401:-1:exon
so has part: feature:64950-65040:-1:exon
so has part: feature:64849-64861:-1:exon

XP_035197107.1
type: Protein
SIO_000068: ncbiprotein

position:64849:-1
position: 64849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66531:-1
position: 66531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66465-66531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66006-66263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65515-65796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65117-65401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64950-65040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64849-64861:-1:exon

LOC118175214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X1
translation: MQPRCLLLFPFLFFPGTWAEPEAGSPMLQLRHFVTFQNATSMQVGGLGLVGDINIGCVDRRTWDIHYHQPWLRPALPKGDWDVIESSIKSYLRDFNSLVQTLITHTSMSFPFVFQSSIGCKLQPNGTTRTYLVIGYEGQDLLRFHLIKGTWDRVPDNEVSAAAEHFLNNATTLNELIQVLLNVTCVDILERFTEYGRADLERQEPPTATVFARTAGPAQLLLVCRITGFYPRPISVAWLRDGHEVPPGPALNTSAVLPNADLTYQVYSVLTVAPRDGHSYACRVRHRSLGTRSLLVPWGKSNAGLIAGLGVALLAAVVVSGALWVWRRRKCH
SIO_010081: LOC118175214
subclass of: SO_0000673
so part of: LOC118175214
location: complement(join(64849..64861,64950..65040,65117..65401,65515..65796,66006..66266,66465..66531))
location: region:64849-66531:-1
so has part: feature:66465-66531:-1:exon
so has part: feature:66006-66266:-1:exon
so has part: feature:65515-65796:-1:exon
so has part: feature:65117-65401:-1:exon
so has part: feature:64950-65040:-1:exon
so has part: feature:64849-64861:-1:exon

XP_035197106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66465-66531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66006-66266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65515-65796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65117-65401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64950-65040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64849-64861:-1:exon

LOC118175214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X3
translation: MGRARGSLPPSPAGSPMLQLRHFVTFQNATSMQVGGLGLVGDINIGCVDRRTWDIHYHQPWLRPALPKGDWDVIESSIKSYLRDFNSLVQTLITHTSMSFPFVFQSSIGCKLQPNGTTRTYLVIGYEGQDLLRFHLIKGTWDRVPDNEVSAAAEHFLNNATTLNELIQVLLNVTCVDILERFTEYGRADLERQEPPTATVFARTAGPAQLLLVCRITGFYPRPISVAWLRDGHEVPPGPALNTSAVLPNADLTYQVYSVLTVAPRDGHSYACRVRHRSLGTRSLLVPWGKSNAGLIAGLGVALLAAVVVSGALWVWRRRKCH
SIO_010081: LOC118175214
subclass of: SO_0000673
so part of: LOC118175214
location: complement(join(64849..64861,64950..65040,65117..65401,65515..65796,66006..66286,66465..66481))
location: region:64849-66481:-1
so has part: feature:66465-66481:-1:exon
so has part: feature:66006-66286:-1:exon
so has part: feature:65515-65796:-1:exon
so has part: feature:65117-65401:-1:exon
so has part: feature:64950-65040:-1:exon
so has part: feature:64849-64861:-1:exon

XP_035197108.1
type: Protein
SIO_000068: ncbiprotein

position:66481:-1
position: 66481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66465-66481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66006-66286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65515-65796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65117-65401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64950-65040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64849-64861:-1:exon

LOC118175212
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 67763..70953
location: region:67763-70953:1
so has part: feature:67763-70953:1:exon
subclass of: SO_0000010

118175212
type: Gene
SIO_000068: ncbigene

position:67763:1
position: 67763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70953:1
position: 70953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67763-70953:1:exon

LOC118175212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175212
product: T-cell surface glycoprotein CD1b-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_035341212.1
SIO_010081: LOC118175212
subclass of: SO_0000673
so part of: LOC118175212
location: join(67763..67958,68515..68775,69200..69481,69587..69871,69955..70051,70125..70953)
location: region:67763-70953:1
so has part: feature:67763-67958:1:exon
so has part: feature:68515-68775:1:exon
so has part: feature:69200-69481:1:exon
so has part: feature:69587-69871:1:exon
so has part: feature:69955-70051:1:exon
so has part: feature:70125-70953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67763-67958:1:exon

position:67958:1
position: 67958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68515-68775:1:exon

position:68515:1
position: 68515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68775:1
position: 68775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69200-69481:1:exon

position:69200:1
position: 69200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69481:1
position: 69481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69587-69871:1:exon

position:69587:1
position: 69587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69871:1
position: 69871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69955-70051:1:exon

position:69955:1
position: 69955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70051:1
position: 70051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70125-70953:1:exon

position:70125:1
position: 70125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175212
product: T-cell surface glycoprotein CD1b-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_035341211.1
SIO_010081: LOC118175212
subclass of: SO_0000673
so part of: LOC118175212
location: join(67764..67958,68497..68775,69200..69481,69587..69871,69955..70051,70125..70953)
location: region:67764-70953:1
so has part: feature:67764-67958:1:exon
so has part: feature:68497-68775:1:exon
so has part: feature:69200-69481:1:exon
so has part: feature:69587-69871:1:exon
so has part: feature:69955-70051:1:exon
so has part: feature:70125-70953:1:exon

position:67764:1
position: 67764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67764-67958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68497-68775:1:exon

position:68497:1
position: 68497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69200-69481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69587-69871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69955-70051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70125-70953:1:exon

LOC118175212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175212
product: T-cell surface glycoprotein CD1b-3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_035341214.1
SIO_010081: LOC118175212
subclass of: SO_0000673
so part of: LOC118175212
location: join(67800..67958,68561..68775,69200..69481,69587..69871,69955..70051,70125..70953)
location: region:67800-70953:1
so has part: feature:67800-67958:1:exon
so has part: feature:68561-68775:1:exon
so has part: feature:69200-69481:1:exon
so has part: feature:69587-69871:1:exon
so has part: feature:69955-70051:1:exon
so has part: feature:70125-70953:1:exon

position:67800:1
position: 67800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67800-67958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68561-68775:1:exon

position:68561:1
position: 68561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69200-69481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69587-69871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69955-70051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70125-70953:1:exon

LOC118175212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X1
translation: MRPRRLLFLLLLLYHRTWAEPVAPSPLPAESQLFQVLQTFVLPSANSTEVAGEAVLADMLVYVLDQDTWNLRICYPWVHQAMAEGDIEKILSSFKTGMRNAIRFMHEMAKEVRAEYPMVFQLHAGCELHPNGTRHVFTKIGEGGRDLVEYEVERRYWAVQQSTPLAKLVGQSLNGMLAVKEMVEHLLYKSCLSHLRALCRHGRADLERQEPPTATVFARTAGPAQLLLVCRITGFYPRPISVAWLRDGHEVPPGPALNTSAVLPNADLTYQVYSVLTVAPRDGHSYACRVRHRSLGTRSLLVPWENPTVTPTVVVVLVVLLLAVAIAIGAAWWWRYRRGAVSRRDVQESLV
SIO_010081: LOC118175212
subclass of: SO_0000673
so part of: LOC118175212
location: join(67892..67958,68497..68775,69200..69481,69587..69871,69955..70051,70125..70170)
location: region:67892-70170:1
so has part: feature:67892-67958:1:exon
so has part: feature:68497-68775:1:exon
so has part: feature:69200-69481:1:exon
so has part: feature:69587-69871:1:exon
so has part: feature:69955-70051:1:exon
so has part: feature:70125-70170:1:exon

XP_035197102.1
type: Protein
SIO_000068: ncbiprotein

position:67892:1
position: 67892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70170:1
position: 70170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67892-67958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68497-68775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69200-69481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69587-69871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69955-70051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70125-70170:1:exon

LOC118175212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X2
translation: MRPRRLLFLLLLLYHRTWAEPVAESQLFQVLQTFVLPSANSTEVAGEAVLADMLVYVLDQDTWNLRICYPWVHQAMAEGDIEKILSSFKTGMRNAIRFMHEMAKEVRAEYPMVFQLHAGCELHPNGTRHVFTKIGEGGRDLVEYEVERRYWAVQQSTPLAKLVGQSLNGMLAVKEMVEHLLYKSCLSHLRALCRHGRADLERQEPPTATVFARTAGPAQLLLVCRITGFYPRPISVAWLRDGHEVPPGPALNTSAVLPNADLTYQVYSVLTVAPRDGHSYACRVRHRSLGTRSLLVPWENPTVTPTVVVVLVVLLLAVAIAIGAAWWWRYRRGAVSRRDVQESLV
SIO_010081: LOC118175212
subclass of: SO_0000673
so part of: LOC118175212
location: join(67892..67958,68515..68775,69200..69481,69587..69871,69955..70051,70125..70170)
location: region:67892-70170:1
so has part: feature:67892-67958:1:exon
so has part: feature:68515-68775:1:exon
so has part: feature:69200-69481:1:exon
so has part: feature:69587-69871:1:exon
so has part: feature:69955-70051:1:exon
so has part: feature:70125-70170:1:exon

XP_035197103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67892-67958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68515-68775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69200-69481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69587-69871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69955-70051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70125-70170:1:exon

LOC118175212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X3
translation: MGRTSSANSTEVAGEAVLADMLVYVLDQDTWNLRICYPWVHQAMAEGDIEKILSSFKTGMRNAIRFMHEMAKEVRAEYPMVFQLHAGCELHPNGTRHVFTKIGEGGRDLVEYEVERRYWAVQQSTPLAKLVGQSLNGMLAVKEMVEHLLYKSCLSHLRALCRHGRADLERQEPPTATVFARTAGPAQLLLVCRITGFYPRPISVAWLRDGHEVPPGPALNTSAVLPNADLTYQVYSVLTVAPRDGHSYACRVRHRSLGTRSLLVPWENPTVTPTVVVVLVVLLLAVAIAIGAAWWWRYRRGAVSRRDVQESLV
SIO_010081: LOC118175212
subclass of: SO_0000673
so part of: LOC118175212
location: join(67942..67958,68561..68775,69200..69481,69587..69871,69955..70051,70125..70170)
location: region:67942-70170:1
so has part: feature:67942-67958:1:exon
so has part: feature:68561-68775:1:exon
so has part: feature:69200-69481:1:exon
so has part: feature:69587-69871:1:exon
so has part: feature:69955-70051:1:exon
so has part: feature:70125-70170:1:exon

XP_035197105.1
type: Protein
SIO_000068: ncbiprotein

position:67942:1
position: 67942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67942-67958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68561-68775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69200-69481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69587-69871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69955-70051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70125-70170:1:exon

LOC118175174
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 72552..74570
location: region:72552-74570:1
so has part: feature:72552-74570:1:exon
subclass of: SO_0000010

118175174
type: Gene
SIO_000068: ncbigene

position:72552:1
position: 72552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74570:1
position: 74570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72552-74570:1:exon

LOC118175174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175174
product: leukotriene B4 receptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035341143.1
SIO_010081: LOC118175174
subclass of: SO_0000673
so part of: LOC118175174
location: join(72552..72750,73250..74570)
location: region:72552-74570:1
so has part: feature:72552-72750:1:exon
so has part: feature:73250-74570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72552-72750:1:exon

position:72750:1
position: 72750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73250-74570:1:exon

position:73250:1
position: 73250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MSTPSSNGTATPIPSAAVGLTLLSAAMVVGLPGNALVLWSCAVTRRRGIPMLLVFHLALADVATLLTGPVYIRFLSTGRWDLGPAACRGCNYICAAAMYASVFLIALLGLHRCLVVSRPSAAVVAGDRAAQLAHGAAAVTWLVALVLASPSIAFRHVEDGLCKRKHSSTTWLVTHNLLETGLGWALPLTAVAAGYGLLLQRLRRTRLARRGRTLGLVAAVVVAFAVTWGPYHIASLLEVVAKLRKGSEPLNRVARAIRPPATALAFISSALNPLLYACAGRRLCHTAGTALLPRLLEGSTAFSSNRKTTARATHRARSTQKDKEKGGEDVAVEDVGTGNGGTAVEVMGMGDEGTVVEDTETGDSGAGRA
SIO_010081: LOC118175174
subclass of: SO_0000673
so part of: LOC118175174
location: 73261..74370
location: region:73261-74370:1
so has part: feature:73261-74370:1:exon

XP_035197034.1
type: Protein
SIO_000068: ncbiprotein

position:73261:1
position: 73261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74370:1
position: 74370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73261-74370:1:exon

LOC118175189
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78206..85624
location: region:78206-85624:1
so has part: feature:78206-85624:1:exon
subclass of: SO_0000010

118175189
type: Gene
SIO_000068: ncbigene

position:78206:1
position: 78206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85624:1
position: 85624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78206-85624:1:exon

LOC118175189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175189
product: butyrophilin subfamily 1 member A1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035341166.1
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78206..78443,79054..79156,80015..80121,80197..80362,80676..80957,81536..81640,82073..82093,82530..82733,83276..83296,83660..83680,83909..83941,84409..85624)
location: region:78206-85624:1
so has part: feature:78206-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80121:1:exon
so has part: feature:80197-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82733:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:83909-83941:1:exon
so has part: feature:84409-85624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78206-78443:1:exon

position:78443:1
position: 78443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

position:79054:1
position: 79054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79156:1
position: 79156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80121:1:exon

position:80015:1
position: 80015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80121:1
position: 80121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80197-80362:1:exon

position:80197:1
position: 80197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80362:1
position: 80362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:80676-80957:1:exon

position:80676:1
position: 80676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80957:1
position: 80957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:81536-81640:1:exon

position:81536:1
position: 81536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81640:1
position: 81640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:82073-82093:1:exon

position:82073:1
position: 82073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82093:1
position: 82093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:82530-82733:1:exon

position:82530:1
position: 82530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82733:1
position: 82733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:83276-83296:1:exon

position:83276:1
position: 83276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83296:1
position: 83296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:83660-83680:1:exon

position:83660:1
position: 83660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83680:1
position: 83680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:83909-83941:1:exon

position:83909:1
position: 83909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83941:1
position: 83941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:84409-85624:1:exon

position:84409:1
position: 84409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175189
product: butyrophilin subfamily 1 member A1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035341165.1
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78213..78443,79054..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82733,83276..83296,83660..83680,84409..85622)
location: region:78213-85622:1
so has part: feature:78213-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82733:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:84409-85622:1:exon

position:78213:1
position: 78213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85622:1
position: 85622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78213-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84409-85622:1:exon

LOC118175189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175189
product: butyrophilin subfamily 1 member A1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035341164.1
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78213..78443,79054..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82733,83276..83296,83660..83680,83909..83941,84409..85621)
location: region:78213-85621:1
so has part: feature:78213-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82733:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:83909-83941:1:exon
so has part: feature:84409-85621:1:exon

position:85621:1
position: 85621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78213-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83909-83941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84409-85621:1:exon

LOC118175189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175189
product: butyrophilin subfamily 1 member A1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035341168.1
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78215..78443,79054..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82550,83276..83296,83660..83680,84409..85617)
location: region:78215-85617:1
so has part: feature:78215-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82550:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:84409-85617:1:exon

position:78215:1
position: 78215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85617:1
position: 85617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78215-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82550:1:exon

position:82550:1
position: 82550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84409-85617:1:exon

LOC118175189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175189
product: butyrophilin subfamily 1 member A1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035341167.1
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78215..78443,79054..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82550,83276..83296,83660..83680,83909..83941,84409..85616)
location: region:78215-85616:1
so has part: feature:78215-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82550:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:83909-83941:1:exon
so has part: feature:84409-85616:1:exon

position:85616:1
position: 85616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78215-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82550:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83909-83941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84409-85616:1:exon

LOC118175189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X1
translation: MPSQPRGFSDPFSLPLFLALSKLQGGQGCSTKRAMLPPPRGAAVWMGSGELDVKMLVSSCLLCSSSLLACATVFFGFHLHKLDCARFRVLGSDHPITATAGGDVVLPCRLSPRLNAEHMEVRWFRSRFSIYVHLYHSGQDHFSSQMPEYQGRTEFLKGGVSDGNVSLRILRTRLSDEGQYQCLVKDGNFYEEATLELKVAVSGSSPLLSVEDYQDGGIRVGCRAAGWYPKPEMLWRDFQGQQLPSFTESASQDKNGFFQVEKTIIILKNSKQNVSCSVQNTRLPQEKDSSIYISDAIFPKVSPWMVTLFATLAGCSALLIFFLLIYQLRAKYVTELEKRSAEIRKYHGSSVPVGSSAGRTNPASGCLLRCMMRAGGEEVGRTQCFCWGLGEQMKCATSSELASFGERDMEIQKLAAELRWRNAIVPVEEVHVTLDADTAHPQLILSTDGKKVRRGDTRQPMPDNPERYDTYHCVLGQEGFVSGRCFWEVDVGTEEGGVWAMGVARESMKRKGWINPAPQDGILAIFHCGGKYWALTSPDHTALLLTQMPRTIRVYLDFEGQKVAFFNADNQDLLFSFPLAPLSGEKIRPWFRVGPIAQLSLKSPLPAPRVSSMEEPLLPSCFPLKTLSTGQKTPCTPEGRA
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78294..78443,79054..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82733,83276..83296,83660..83680,83909..83941,84409..85046)
location: region:78294-85046:1
so has part: feature:78294-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82733:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:83909-83941:1:exon
so has part: feature:84409-85046:1:exon

XP_035197055.1
type: Protein
SIO_000068: ncbiprotein

position:78294:1
position: 78294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85046:1
position: 85046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78294-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83909-83941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84409-85046:1:exon

LOC118175189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X2
translation: MPSQPRGFSDPFSLPLFLALSKLQGGQGCSTKRAMLPPPRGAAVWMGSGELDVKMLVSSCLLCSSSLLACATVFFGFHLHKLDCARFRVLGSDHPITATAGGDVVLPCRLSPRLNAEHMEVRWFRSRFSIYVHLYHSGQDHFSSQMPEYQGRTEFLKGGVSDGNVSLRILRTRLSDEGQYQCLVKDGNFYEEATLELKVAVSGSSPLLSVEDYQDGGIRVGCRAAGWYPKPEMLWRDFQGQQLPSFTESASQDKNGFFQVEKTIIILKNSKQNVSCSVQNTRLPQEKDSSIYISDAIFPKVSPWMVTLFATLAGCSALLIFFLLIYQLRAKYVTELEKRSAEIRKYHGSSVPVGSSAGRTNPASGCLLRCMMRAGGEEVGRTQCFCWGLGEQMKCATSSELASFGERDMEIQKLAAELLHVTLDADTAHPQLILSTDGKKVRRGDTRQPMPDNPERYDTYHCVLGQEGFVSGRCFWEVDVGTEEGGVWAMGVARESMKRKGWINPAPQDGILAIFHCGGKYWALTSPDHTALLLTQMPRTIRVYLDFEGQKVAFFNADNQDLLFSFPLAPLSGEKIRPWFRVGPIAQLSLKSPLPAPRVSSMEEPLLPSCFPLKTLSTGQKTPCTPEGRA
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78294..78443,79054..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82733,83276..83296,83660..83680,84409..85046)
location: region:78294-85046:1
so has part: feature:78294-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82733:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:84409-85046:1:exon

XP_035197056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78294-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84409-85046:1:exon

LOC118175189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X4
translation: MPSQPRGFSDPFSLPLFLALSKLQGGQGCSTKRAMLPPPRGAAVWMGSGELDVKMLVSSCLLCSSSLLACATVFFGFHLHKLDCARFRVLGSDHPITATAGGDVVLPCRLSPRLNAEHMEVRWFRSRFSIYVHLYHSGQDHFSSQMPEYQGRTEFLKGGVSDGNVSLRILRTRLSDEGQYQCLVKDGNFYEEATLELKVAVSGSSPLLSVEDYQDGGIRVGCRAAGWYPKPEMLWRDFQGQQLPSFTESASQDKNGFFQVEKTIIILKNSKQNVSCSVQNTRLPQEKDSSIYISDAIFPKVSPWMVTLFATLAGCSALLIFFLLIYQLRAKYVTELEKRSAEIRERDMEIQKLAAELRWRNAIVPVEEVHVTLDADTAHPQLILSTDGKKVRRGDTRQPMPDNPERYDTYHCVLGQEGFVSGRCFWEVDVGTEEGGVWAMGVARESMKRKGWINPAPQDGILAIFHCGGKYWALTSPDHTALLLTQMPRTIRVYLDFEGQKVAFFNADNQDLLFSFPLAPLSGEKIRPWFRVGPIAQLSLKSPLPAPRVSSMEEPLLPSCFPLKTLSTGQKTPCTPEGRA
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78294..78443,79054..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82550,83276..83296,83660..83680,83909..83941,84409..85046)
location: region:78294-85046:1
so has part: feature:78294-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82550:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:83909-83941:1:exon
so has part: feature:84409-85046:1:exon

XP_035197058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78294-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82550:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83909-83941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84409-85046:1:exon

LOC118175189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X5
translation: MPSQPRGFSDPFSLPLFLALSKLQGGQGCSTKRAMLPPPRGAAVWMGSGELDVKMLVSSCLLCSSSLLACATVFFGFHLHKLDCARFRVLGSDHPITATAGGDVVLPCRLSPRLNAEHMEVRWFRSRFSIYVHLYHSGQDHFSSQMPEYQGRTEFLKGGVSDGNVSLRILRTRLSDEGQYQCLVKDGNFYEEATLELKVAVSGSSPLLSVEDYQDGGIRVGCRAAGWYPKPEMLWRDFQGQQLPSFTESASQDKNGFFQVEKTIIILKNSKQNVSCSVQNTRLPQEKDSSIYISDAIFPKVSPWMVTLFATLAGCSALLIFFLLIYQLRAKYVTELEKRSAEIRERDMEIQKLAAELLHVTLDADTAHPQLILSTDGKKVRRGDTRQPMPDNPERYDTYHCVLGQEGFVSGRCFWEVDVGTEEGGVWAMGVARESMKRKGWINPAPQDGILAIFHCGGKYWALTSPDHTALLLTQMPRTIRVYLDFEGQKVAFFNADNQDLLFSFPLAPLSGEKIRPWFRVGPIAQLSLKSPLPAPRVSSMEEPLLPSCFPLKTLSTGQKTPCTPEGRA
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78294..78443,79054..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82550,83276..83296,83660..83680,84409..85046)
location: region:78294-85046:1
so has part: feature:78294-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82550:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:84409-85046:1:exon

XP_035197059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78294-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82550:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84409-85046:1:exon

LOC118175189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X3
translation: MPSQPRGFSDPFSLPLFLALSKLQGGQGCSTKRAMLPPPRGAAVWMGSGELDVKMLVSSCLLCSSSLLACATVFFGFHLHKLDCARFRVLGSDHPITATAGGDVVLPCRLSPRLNAEHMEMPEYQGRTEFLKGGVSDGNVSLRILRTRLSDEGQYQCLVKDGNFYEEATLELKVAVSGSSPLLSVEDYQDGGIRVGCRAAGWYPKPEMLWRDFQGQQLPSFTESASQDKNGFFQVEKTIIILKNSKQNVSCSVQNTRLPQEKDSSIYISDAIFPKVSPWMVTLFATLAGCSALLIFFLLIYQLRAKYVTELEKRSAEIRKYHGSSVPVGSSAGRTNPASGCLLRCMMRAGGEEVGRTQCFCWGLGEQMKCATSSELASFGERDMEIQKLAAELRWRNAIVPVEEVHVTLDADTAHPQLILSTDGKKVRRGDTRQPMPDNPERYDTYHCVLGQEGFVSGRCFWEVDVGTEEGGVWAMGVARESMKRKGWINPAPQDGILAIFHCGGKYWALTSPDHTALLLTQMPRTIRVYLDFEGQKVAFFNADNQDLLFSFPLAPLSGEKIRPWFRVGPIAQLSLKSPLPAPRVSSMEEPLLPSCFPLKTLSTGQKTPCTPEGRA
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78294..78443,79054..79156,80015..80121,80197..80362,80676..80957,81536..81640,82073..82093,82530..82733,83276..83296,83660..83680,83909..83941,84409..85046)
location: region:78294-85046:1
so has part: feature:78294-78443:1:exon
so has part: feature:79054-79156:1:exon
so has part: feature:80015-80121:1:exon
so has part: feature:80197-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82733:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:83909-83941:1:exon
so has part: feature:84409-85046:1:exon

XP_035197057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78294-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79054-79156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80197-80362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82530-82733:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83909-83941:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84409-85046:1:exon

LOC118175189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175189
product: butyrophilin subfamily 1 member A1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_035341169.1
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(78341..78443,79049..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82733,83276..83296,83660..83680,83909..83941,84409..85623)
location: region:78341-85623:1
so has part: feature:78341-78443:1:exon
so has part: feature:79049-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82733:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:83909-83941:1:exon
so has part: feature:84409-85623:1:exon

position:78341:1
position: 78341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85623:1
position: 85623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78341-78443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79049-79156:1:exon

position:79049:1
position: 79049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82530-82733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83909-83941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84409-85623:1:exon

LOC118175189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X6
translation: MLVSSCLLCSSSLLACATVFFGFHLHKLDCARFRVLGSDHPITATAGGDVVLPCRLSPRLNAEHMEVRWFRSRFSIYVHLYHSGQDHFSSQMPEYQGRTEFLKGGVSDGNVSLRILRTRLSDEGQYQCLVKDGNFYEEATLELKVAVSGSSPLLSVEDYQDGGIRVGCRAAGWYPKPEMLWRDFQGQQLPSFTESASQDKNGFFQVEKTIIILKNSKQNVSCSVQNTRLPQEKDSSIYISDAIFPKVSPWMVTLFATLAGCSALLIFFLLIYQLRAKYVTELEKRSAEIRKYHGSSVPVGSSAGRTNPASGCLLRCMMRAGGEEVGRTQCFCWGLGEQMKCATSSELASFGERDMEIQKLAAELRWRNAIVPVEEVHVTLDADTAHPQLILSTDGKKVRRGDTRQPMPDNPERYDTYHCVLGQEGFVSGRCFWEVDVGTEEGGVWAMGVARESMKRKGWINPAPQDGILAIFHCGGKYWALTSPDHTALLLTQMPRTIRVYLDFEGQKVAFFNADNQDLLFSFPLAPLSGEKIRPWFRVGPIAQLSLKSPLPAPRVSSMEEPLLPSCFPLKTLSTGQKTPCTPEGRA
SIO_010081: LOC118175189
subclass of: SO_0000673
so part of: LOC118175189
location: join(79066..79156,80015..80362,80676..80957,81536..81640,82073..82093,82530..82733,83276..83296,83660..83680,83909..83941,84409..85046)
location: region:79066-85046:1
so has part: feature:79066-79156:1:exon
so has part: feature:80015-80362:1:exon
so has part: feature:80676-80957:1:exon
so has part: feature:81536-81640:1:exon
so has part: feature:82073-82093:1:exon
so has part: feature:82530-82733:1:exon
so has part: feature:83276-83296:1:exon
so has part: feature:83660-83680:1:exon
so has part: feature:83909-83941:1:exon
so has part: feature:84409-85046:1:exon

XP_035197060.1
type: Protein
SIO_000068: ncbiprotein

position:79066:1
position: 79066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79066-79156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80015-80362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80676-80957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81536-81640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82073-82093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82530-82733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83276-83296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83660-83680:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83909-83941:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84409-85046:1:exon

LOC118175192
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90564..96708
location: region:90564-96708:1
so has part: feature:90564-96708:1:exon
subclass of: SO_0000010

118175192
type: Gene
SIO_000068: ncbigene

position:90564:1
position: 90564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96708:1
position: 96708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90564-96708:1:exon

LOC118175192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175192
product: zinc finger protein 501-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035341175.1
SIO_010081: LOC118175192
subclass of: SO_0000673
so part of: LOC118175192
location: join(90564..90790,91365..91464,94015..94197,94657..96708)
location: region:90564-96708:1
so has part: feature:90564-90790:1:exon
so has part: feature:91365-91464:1:exon
so has part: feature:94015-94197:1:exon
so has part: feature:94657-96708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90564-90790:1:exon

position:90790:1
position: 90790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91365-91464:1:exon

position:91365:1
position: 91365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91464:1
position: 91464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94015-94197:1:exon

position:94015:1
position: 94015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94197:1
position: 94197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94657-96708:1:exon

position:94657:1
position: 94657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175192
product: zinc finger protein 501-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035341176.1
SIO_010081: LOC118175192
subclass of: SO_0000673
so part of: LOC118175192
location: join(90772..90790,91365..91464,93910..94197,94657..96708)
location: region:90772-96708:1
so has part: feature:90772-90790:1:exon
so has part: feature:91365-91464:1:exon
so has part: feature:93910-94197:1:exon
so has part: feature:94657-96708:1:exon

position:90772:1
position: 90772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90772-90790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91365-91464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93910-94197:1:exon

position:93910:1
position: 93910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94657-96708:1:exon

LOC118175192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X1
translation: MEAAQVPEAFEEVIVIATDKQWSLATPLQKNQAPALEPAYSPELLVHLEQEEEAWIPNIQSSEDEEPVRPIMRLWARKRKRWKSCRDAASSSSSNSSYSGDGLTSEMEDSSQEEEGEWVELRGETVMNPKDEISLGYEHHKSHSGWRSASSSHKGRKHPRKSPLRIEIGQHKHACRKCGKSFSRGSSLNRHQRVHVAEKPSTCCKCGRSFVCSSNLKDHLKNPCQEKPYKCPKCEKRFASSRSLQKHCKLHHGSNVYQCSECGKNLTSNSALLIHHRIHTGERPYECPECGKSFMANKSLSKHRKSHTEDGIFTCPDCGKKLTSNSTLIIHRRIHTGERPYECPECGKRFMANKSLSKHRKSHLEEGTYKCPQCREIFAKNSAYVAHLRTHQGQPPYPCSDCGEAFFESSTFNQHRKKHLVGKPYQCPDCGMGFTALSALLLHQKSHVGPRPHVCSDCGKAFRETTTLRRHQRIHTGEKPYHCSYCEKSFRASSTLIIHQRIHTGEKPYKCTKCTKCFMSSSSLMKHLRMHLRKELHSE
SIO_010081: LOC118175192
subclass of: SO_0000673
so part of: LOC118175192
location: join(90776..90790,91365..91464,94015..94197,94657..95978)
location: region:90776-95978:1
so has part: feature:90776-90790:1:exon
so has part: feature:91365-91464:1:exon
so has part: feature:94015-94197:1:exon
so has part: feature:94657-95978:1:exon

XP_035197066.1
type: Protein
SIO_000068: ncbiprotein

position:90776:1
position: 90776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95978:1
position: 95978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90776-90790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91365-91464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94015-94197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94657-95978:1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(92371..92452)
location: region:92371-92452:-1
so has part: feature:92371-92452:-1:exon
subclass of: SO_0000663

118175231
type: Gene
SIO_000068: ncbigene

position:92371:-1
position: 92371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92452:-1
position: 92452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92371-92452:-1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(92416..92418),aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: complement(92371..92452)
location: region:92371-92452:-1
so has part: feature:92371-92452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92371-92452:-1:exon

LOC118175192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like isoform X2
translation: MRLWARKRKRWKSCRDAASSSSSNSSYSGDGLTSEMEDSSQEEEGEWVELRGETVMNPKDEISLGYEHHKSHSGWRSASSSHKGRKHPRKSPLRIEIGQHKHACRKCGKSFSRGSSLNRHQRVHVAEKPSTCCKCGRSFVCSSNLKDHLKNPCQEKPYKCPKCEKRFASSRSLQKHCKLHHGSNVYQCSECGKNLTSNSALLIHHRIHTGERPYECPECGKSFMANKSLSKHRKSHTEDGIFTCPDCGKKLTSNSTLIIHRRIHTGERPYECPECGKRFMANKSLSKHRKSHLEEGTYKCPQCREIFAKNSAYVAHLRTHQGQPPYPCSDCGEAFFESSTFNQHRKKHLVGKPYQCPDCGMGFTALSALLLHQKSHVGPRPHVCSDCGKAFRETTTLRRHQRIHTGEKPYHCSYCEKSFRASSTLIIHQRIHTGEKPYKCTKCTKCFMSSSSLMKHLRMHLRKELHSE
SIO_010081: LOC118175192
subclass of: SO_0000673
so part of: LOC118175192
location: join(94113..94197,94657..95978)
location: region:94113-95978:1
so has part: feature:94113-94197:1:exon
so has part: feature:94657-95978:1:exon

XP_035197067.1
type: Protein
SIO_000068: ncbiprotein

position:94113:1
position: 94113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94113-94197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94657-95978:1:exon

LOC118175202
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133265..135162
location: region:133265-135162:1
so has part: feature:133265-135162:1:exon
subclass of: SO_0000010

118175202
type: Gene
SIO_000068: ncbigene

position:133265:1
position: 133265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135162:1
position: 135162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133265-135162:1:exon

LOC118175202
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175202
product: zinc finger protein 239-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_035341198.1
SIO_010081: LOC118175202
subclass of: SO_0000673
so part of: LOC118175202
location: join(133265..133380,133706..135162)
location: region:133265-135162:1
so has part: feature:133265-133380:1:exon
so has part: feature:133706-135162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133265-133380:1:exon

position:133380:1
position: 133380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133706-135162:1:exon

position:133706:1
position: 133706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175202
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175202
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 239-like
translation: MDGEMEEESAGDQDAEQARRRAVAWVMLEHSARGSQQGLLTWKTGSRTLCGGADANLGETPIQVETAERPPEQGQEGGWSRDLLTPPRDDVGEKPFKCPECGRSFMRSSDLIVHQRSHTGEKPYQCPECGRCFNRSSSLVTHQRVHTGEKMYKCPECVKSFTRSSTLTAHLRTHTGEKPYQCCECGKSFSKRSNLIKHQRQHTGERPYRCPDCGKSFIQSSDLIVHQRTHTGEKPYQCSECGKCFSVRSKLIQHQRVHTGEKPYTCAKCGKSFGQSSHLSVHQKTHRGEKXQRSKCGRSSSVRSCLAKYWKLHAGDGYTEYLSVGDGLQKNMKWAPRTCTCSPSSSAPAMGTM
SIO_010081: LOC118175202
subclass of: SO_0000673
so part of: LOC118175202
location: 133717..134776
location: region:133717-134776:1
so has part: feature:133717-134776:1:exon

XP_035197089.1
type: Protein
SIO_000068: ncbiprotein

position:133717:1
position: 133717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134776:1
position: 134776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133717-134776:1:exon

LOC118175191
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 136478..138972
location: region:136478-138972:1
so has part: feature:136478-138972:1:exon
subclass of: SO_0000010

118175191
type: Gene
SIO_000068: ncbigene

position:136478:1
position: 136478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138972:1
position: 138972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136478-138972:1:exon

LOC118175191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175191
product: zinc finger protein 883-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 191 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035341173.1
SIO_010081: LOC118175191
subclass of: SO_0000673
so part of: LOC118175191
location: join(136478..136653,136801..138972)
location: region:136478-138972:1
so has part: feature:136478-136653:1:exon
so has part: feature:136801-138972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136478-136653:1:exon

position:136653:1
position: 136653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136801-138972:1:exon

position:136801:1
position: 136801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175191
product: zinc finger protein 883-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 191 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035341174.1
SIO_010081: LOC118175191
subclass of: SO_0000673
so part of: LOC118175191
location: join(136478..136653,136804..138972)
location: region:136478-138972:1
so has part: feature:136478-136653:1:exon
so has part: feature:136804-138972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136478-136653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136804-138972:1:exon

position:136804:1
position: 136804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X1
translation: MEQPGELPTPPGMQEEKTPGDPLGAGCTPRRARTEPSPTQGCTEGRGEPGIATGITAGKRAGSGSEGMQPEAAPEAEWRLAEGEAVKAVAHLIPRGGDVKILDGSKARRGAAAREKKYACEECGKRFGQSSNLIVHQRIHTGEKPYRCHECGKCFRQSSNLIVHQKTHAGEKLYECPKCQKCFPDRSLLIRHKRIHVGEKPFKCQQCGKSFIHRSRLLVHEKVHTGDQLYQCPQCRKCFGDKPKLLQHRRRHVGERRYKCYECRAEFGQSSALNLHQRVHVEEKLYQCSTCEKCFKDRSTLIRHETVHTGEKPYKCHECGKRFTRSSDIIVHQRTHTGEKPFECPECGKSFSHRSNLFRHQRMHTGEKPYKCEECGKRFGQSSELIVHQRTHTGEKPYHCSECEKFFRGRSTLFRHERLHTGIKPYECSECGKSFGQSGDLIAHQRFHTGEKPYQCGECGKFFSNRSSLVRHQRLHAGEKPYKCHECGKSFGQSSDLIAHQRTHTGEKPYPCPVCGKSFSRRSNLLVHQRVHGRDRLCKCRQCGRSFQQNPQLAPQQNSPRCPECAKWFEEGSKSGEHQR
SIO_010081: LOC118175191
subclass of: SO_0000673
so part of: LOC118175191
location: join(136581..136653,136801..138470)
location: region:136581-138470:1
so has part: feature:136581-136653:1:exon
so has part: feature:136801-138470:1:exon

XP_035197064.1
type: Protein
SIO_000068: ncbiprotein

position:136581:1
position: 136581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138470:1
position: 138470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136581-136653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136801-138470:1:exon

LOC118175191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X2
translation: MEQPGELPTPPGMQEEKTPGDPLGGCTPRRARTEPSPTQGCTEGRGEPGIATGITAGKRAGSGSEGMQPEAAPEAEWRLAEGEAVKAVAHLIPRGGDVKILDGSKARRGAAAREKKYACEECGKRFGQSSNLIVHQRIHTGEKPYRCHECGKCFRQSSNLIVHQKTHAGEKLYECPKCQKCFPDRSLLIRHKRIHVGEKPFKCQQCGKSFIHRSRLLVHEKVHTGDQLYQCPQCRKCFGDKPKLLQHRRRHVGERRYKCYECRAEFGQSSALNLHQRVHVEEKLYQCSTCEKCFKDRSTLIRHETVHTGEKPYKCHECGKRFTRSSDIIVHQRTHTGEKPFECPECGKSFSHRSNLFRHQRMHTGEKPYKCEECGKRFGQSSELIVHQRTHTGEKPYHCSECEKFFRGRSTLFRHERLHTGIKPYECSECGKSFGQSGDLIAHQRFHTGEKPYQCGECGKFFSNRSSLVRHQRLHAGEKPYKCHECGKSFGQSSDLIAHQRTHTGEKPYPCPVCGKSFSRRSNLLVHQRVHGRDRLCKCRQCGRSFQQNPQLAPQQNSPRCPECAKWFEEGSKSGEHQR
SIO_010081: LOC118175191
subclass of: SO_0000673
so part of: LOC118175191
location: join(136581..136653,136804..138470)
location: region:136581-138470:1
so has part: feature:136581-136653:1:exon
so has part: feature:136804-138470:1:exon

XP_035197065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136581-136653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136804-138470:1:exon

LOC118175200
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(139210..145785)
location: region:139210-145785:-1
so has part: feature:139210-145785:-1:exon
subclass of: SO_0000010

118175200
type: Gene
SIO_000068: ncbigene

position:139210:-1
position: 139210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145785:-1
position: 145785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139210-145785:-1:exon

LOC118175200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175200
product: zinc finger protein OZF-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 370 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341196.1
SIO_010081: LOC118175200
subclass of: SO_0000673
so part of: LOC118175200
location: complement(join(139210..141403,144044..145168,145399..145785))
location: region:139210-145785:-1
so has part: feature:145399-145785:-1:exon
so has part: feature:144044-145168:-1:exon
so has part: feature:139210-141403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145399-145785:-1:exon

position:145399:-1
position: 145399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144044-145168:-1:exon

position:144044:-1
position: 144044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145168:-1
position: 145168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139210-141403:-1:exon

position:141403:-1
position: 141403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175200
product: zinc finger protein OZF-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 221 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_035341195.1
SIO_010081: LOC118175200
subclass of: SO_0000673
so part of: LOC118175200
location: complement(join(139210..141613,141718..141857,142111..142262))
location: region:139210-142262:-1
so has part: feature:142111-142262:-1:exon
so has part: feature:141718-141857:-1:exon
so has part: feature:139210-141613:-1:exon

position:142262:-1
position: 142262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142111-142262:-1:exon

position:142111:-1
position: 142111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141718-141857:-1:exon

position:141718:-1
position: 141718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141857:-1
position: 141857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139210-141613:-1:exon

position:141613:-1
position: 141613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175200
product: zinc finger protein OZF-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 221 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_035341194.1
SIO_010081: LOC118175200
subclass of: SO_0000673
so part of: LOC118175200
location: complement(join(139210..141616,141718..141857,142111..142262))
location: region:139210-142262:-1
so has part: feature:142111-142262:-1:exon
so has part: feature:141718-141857:-1:exon
so has part: feature:139210-141616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142111-142262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141718-141857:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139210-141616:-1:exon

position:141616:-1
position: 141616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271-like isoform X3
translation: MEEGGELEAPGPRGRKLGSTRNSQKGDRTRREDGGHHVEQEGPAEGKVGETTVIEPEGDNGGKAHGMEPRKAGNEFAHGDGNGQLIAEESLYECSHCKKCFQERSELICHQRLHRGEKAFKCQECGKEFGKSSDLSTHQKSHMVEKPYQCSTCEKFFKDRSTLIRHERVHTGEKPYKCHECGKRFTRSSDIVVHQRIHTGEKPFECSECGKRFSQRSNLFTHRIVHTGEKPFACHECGKSFARRSELTIHQRTHTEEKPYQCSQCEKSFRGRYGLFRHERLHTGEKPYECSECGKSFGQSGDLITHQRFHTGEKPYQCGECGKFFCNKSSLVKHQKWHSGEKPYKCHECGKSFGQSSDLIAHQRTHTGEKPYPCAECGKRFTRKSSLLVHQRGHRGQRTGEKKYFCKECGKSFRHNSNLIVHRRTHTGEKPYACCACGKPFSDRSNLAKHQRLHSGQKVFRCRDCRKTFGNNPDFLEHQKTHTGERPFQCSECGKRFWHSTKLVMHQKTHAVDKIYKCPRCEKRFKDKSTLLRHEMVHTGEKPYECHECEKRFARKSDLTVHQRIHTGEKPFACAECGKSFNHKSNLFTHQRRHTGEKPFRCQECGKNFGHRTDLLVHQRTHTGEKPFRCSECGKCFKGRTTLMRHERQHTGERPYTCPECGKSFGLSADLVVHQRFHTGEKPYKCGECGNFFCNSSSLVRHQRKHTGEKPYKCHECEKCFAQSTDLLEHRTTHTGEKPYPCQQCGKCFGRKSNLIVHQRVHGLGKHQRGGKSFQVNLVRPDGPMDAAAAACSGCT
SIO_010081: LOC118175200
subclass of: SO_0000673
so part of: LOC118175200
location: complement(join(140214..141403,144044..145168,145399..145474))
location: region:140214-145474:-1
so has part: feature:145399-145474:-1:exon
so has part: feature:144044-145168:-1:exon
so has part: feature:140214-141403:-1:exon

XP_035197087.1
type: Protein
SIO_000068: ncbiprotein

position:140214:-1
position: 140214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145474:-1
position: 145474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145399-145474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144044-145168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140214-141403:-1:exon

LOC118175200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like isoform X2
translation: METLEKPRRGYGMENKVEKGPQWEGPKMSISSSGNSGGNRFRQRTDGPDDCRLQGCAGKDASVAEVLEEPNPPAESFAQEKKYFCKECGKSFRHNSNLIVHRRTHTGEKPYACCACGKPFSDRSNLAKHQRLHSGQKVFRCRDCRKTFGNNPDFLEHQKTHTGERPFQCSECGKRFWHSTKLVMHQKTHAVDKIYKCPRCEKRFKDKSTLLRHEMVHTGEKPYECHECEKRFARKSDLTVHQRIHTGEKPFACAECGKSFNHKSNLFTHQRRHTGEKPFRCQECGKNFGHRTDLLVHQRTHTGEKPFRCSECGKCFKGRTTLMRHERQHTGERPYTCPECGKSFGLSADLVVHQRFHTGEKPYKCGECGNFFCNSSSLVRHQRKHTGEKPYKCHECEKCFAQSTDLLEHRTTHTGEKPYPCQQCGKCFGRKSNLIVHQRVHGLGKHQRGGKSFQVNLVRPDGPMDAAAAACSGCT
SIO_010081: LOC118175200
subclass of: SO_0000673
so part of: LOC118175200
location: complement(join(140214..141613,141718..141745))
location: region:140214-141745:-1
so has part: feature:141718-141745:-1:exon
so has part: feature:140214-141613:-1:exon

XP_035197086.1
type: Protein
SIO_000068: ncbiprotein

position:141745:-1
position: 141745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141718-141745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140214-141613:-1:exon

LOC118175200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like isoform X1
translation: METLEKPRRAGYGMENKVEKGPQWEGPKMSISSSGNSGGNRFRQRTDGPDDCRLQGCAGKDASVAEVLEEPNPPAESFAQEKKYFCKECGKSFRHNSNLIVHRRTHTGEKPYACCACGKPFSDRSNLAKHQRLHSGQKVFRCRDCRKTFGNNPDFLEHQKTHTGERPFQCSECGKRFWHSTKLVMHQKTHAVDKIYKCPRCEKRFKDKSTLLRHEMVHTGEKPYECHECEKRFARKSDLTVHQRIHTGEKPFACAECGKSFNHKSNLFTHQRRHTGEKPFRCQECGKNFGHRTDLLVHQRTHTGEKPFRCSECGKCFKGRTTLMRHERQHTGERPYTCPECGKSFGLSADLVVHQRFHTGEKPYKCGECGNFFCNSSSLVRHQRKHTGEKPYKCHECEKCFAQSTDLLEHRTTHTGEKPYPCQQCGKCFGRKSNLIVHQRVHGLGKHQRGGKSFQVNLVRPDGPMDAAAAACSGCT
SIO_010081: LOC118175200
subclass of: SO_0000673
so part of: LOC118175200
location: complement(join(140214..141616,141718..141745))
location: region:140214-141745:-1
so has part: feature:141718-141745:-1:exon
so has part: feature:140214-141616:-1:exon

XP_035197085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141718-141745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140214-141616:-1:exon

LOC118175206
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 146655..154543
location: region:146655-154543:1
so has part: feature:146655-154543:1:exon
subclass of: SO_0000010

118175206
type: Gene
SIO_000068: ncbigene

position:146655:1
position: 146655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154543:1
position: 154543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146655-154543:1:exon

LOC118175206
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004754912.1
SIO_010081: LOC118175206
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148746..148858,152059..153279,154286..154543)
location: region:146655-154543:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:152059-153279:1:exon
so has part: feature:154286-154543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

position:147113:1
position: 147113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

position:147628:1
position: 147628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147717:1
position: 147717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

position:147854:1
position: 147854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148000:1
position: 148000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

position:148247:1
position: 148247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148401:1
position: 148401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

position:148746:1
position: 148746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148858:1
position: 148858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:152059-153279:1:exon

position:152059:1
position: 152059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153279:1
position: 153279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:154286-154543:1:exon

position:154286:1
position: 154286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175206
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004754914.1
SIO_010081: LOC118175206
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148746..148858,152059..153111,154286..154543)
location: region:146655-154543:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:152059-153111:1:exon
so has part: feature:154286-154543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152059-153111:1:exon

position:153111:1
position: 153111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:154286-154543:1:exon

LOC118175206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035341206.1
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148746..148858,152059..153365)
location: region:146655-153365:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:152059-153365:1:exon

position:153365:1
position: 153365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152059-153365:1:exon

LOC118175206
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004754911.1
SIO_010081: LOC118175206
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148746..148858,152059..152170,152819..153365)
location: region:146655-153365:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:152059-152170:1:exon
so has part: feature:152819-153365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152059-152170:1:exon

position:152170:1
position: 152170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:152819-153365:1:exon

position:152819:1
position: 152819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175206
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004754913.1
SIO_010081: LOC118175206
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148746..148858,152059..152170,153004..153365)
location: region:146655-153365:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:152059-152170:1:exon
so has part: feature:153004-153365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152059-152170:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153004-153365:1:exon

position:153004:1
position: 153004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035341201.1
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148746..148858,151082..151989)
location: region:146655-151989:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:151082-151989:1:exon

position:151989:1
position: 151989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151082-151989:1:exon

position:151082:1
position: 151082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035341203.1
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148749..148858,151082..151989)
location: region:146655-151989:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148749-148858:1:exon
so has part: feature:151082-151989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148749-148858:1:exon

position:148749:1
position: 148749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:151082-151989:1:exon

LOC118175206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_035341205.1
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148749..148858,149022..149419)
location: region:146655-149419:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148749-148858:1:exon
so has part: feature:149022-149419:1:exon

position:149419:1
position: 149419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148749-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149022-149419:1:exon

position:149022:1
position: 149022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175206
product: killer cell lectin-like receptor subfamily F member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_035341204.1
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(146655..147113,147628..147717,147854..148000,148247..148401,148746..148858,149022..149414)
location: region:146655-149414:1
so has part: feature:146655-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:149022-149414:1:exon

position:149414:1
position: 149414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146655-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149022-149414:1:exon

LOC118175206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily F member 1 isoform X5
translation: MEDEEGYTTLNFGAKCSAPRRQQGGGMAGSPRRQYLITSAGWALSTGLGIAVIILGLRVWQWHGSGRCYATLNSSATDAENRENGCRGCLGRLRLQLKAALCNAPETDDRECRLCPRDWLQHGNWCYWVSHESRDWQRSRDDCAQKGSALFVIRNREQMHVLQDVTQGRGYVWIGLAVTGAKGTWTWLDGSVLDTKQAKTEREP
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(147029..147113,147628..147717,147854..148000,148247..148401,148746..148858,152059..152083)
location: region:147029-152083:1
so has part: feature:147029-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:152059-152083:1:exon

XP_035197097.1
type: Protein
SIO_000068: ncbiprotein

position:147029:1
position: 147029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152083:1
position: 152083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147029-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152059-152083:1:exon

LOC118175206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily F member 1 isoform X1
translation: MEDEEGYTTLNFGAKCSAPRRQQGGGMAGSPRRQYLITSAGWALSTGLGIAVIILGLRVWQWHGSGRCYATLNSSATDAENRENGCRGCLGRLRLQLKAALCNAPETDDRECRLCPRDWLQHGNWCYWVSHESRDWQRSRDDCAQKGSALFVIRNREQMHVLQDVTQGRGYVWIGLAVTGAKGTWTWLDGSVLDTKHSLPETTGMMAGMTLALRRSTYLPTVLLPPWNRKREKKREKASVSLPQI
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(147029..147113,147628..147717,147854..148000,148247..148401,148746..148858,151082..151229)
location: region:147029-151229:1
so has part: feature:147029-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:151082-151229:1:exon

XP_035197092.1
type: Protein
SIO_000068: ncbiprotein

position:151229:1
position: 151229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147029-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151082-151229:1:exon

LOC118175206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily F member 1 isoform X2
translation: MEDEEGYTTLNFGAKCSAPRRQQGGGMAGSPRRQYLITSAGWALSTGLGIAVIILGLRVWQWHGSGRCYATLNSSATDAENRENGCRGCLGRLRLQLKAALCNAPETDDRECRLCPRDWLQHGNWCYWVSHESRDWQRSRDDCAQKGSALFVIRNREQMVLQDVTQGRGYVWIGLAVTGAKGTWTWLDGSVLDTKHSLPETTGMMAGMTLALRRSTYLPTVLLPPWNRKREKKREKASVSLPQI
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(147029..147113,147628..147717,147854..148000,148247..148401,148749..148858,151082..151229)
location: region:147029-151229:1
so has part: feature:147029-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148749-148858:1:exon
so has part: feature:151082-151229:1:exon

XP_035197094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147029-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148749-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151082-151229:1:exon

LOC118175206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily F member 1 isoform X3
translation: MEDEEGYTTLNFGAKCSAPRRQQGGGMAGSPRRQYLITSAGWALSTGLGIAVIILGLRVWQWHGSGRCYATLNSSATDAENRENGCRGCLGRLRLQLKAALCNAPETDDRECRLCPRDWLQHGNWCYWVSHESRDWQRSRDDCAQKGSALFVIRNREQMHVLQDVTQGRGYVWIGLAVTGAKGTWTWLDGSVLDTKQFRILGSATSGSCALMKGSQIRSEGCNAESRWVCEKDAVAL
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(147029..147113,147628..147717,147854..148000,148247..148401,148746..148858,149022..149145)
location: region:147029-149145:1
so has part: feature:147029-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148746-148858:1:exon
so has part: feature:149022-149145:1:exon

XP_035197095.1
type: Protein
SIO_000068: ncbiprotein

position:149145:1
position: 149145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147029-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148746-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149022-149145:1:exon

LOC118175206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily B member 1B allele B isoform X4
translation: MEDEEGYTTLNFGAKCSAPRRQQGGGMAGSPRRQYLITSAGWALSTGLGIAVIILGLRVWQWHGSGRCYATLNSSATDAENRENGCRGCLGRLRLQLKAALCNAPETDDRECRLCPRDWLQHGNWCYWVSHESRDWQRSRDDCAQKGSALFVIRNREQMVLQDVTQGRGYVWIGLAVTGAKGTWTWLDGSVLDTKQFRILGSATSGSCALMKGSQIRSEGCNAESRWVCEKDAVAL
SIO_010081: LOC118175206
subclass of: SO_0000673
so part of: LOC118175206
location: join(147029..147113,147628..147717,147854..148000,148247..148401,148749..148858,149022..149145)
location: region:147029-149145:1
so has part: feature:147029-147113:1:exon
so has part: feature:147628-147717:1:exon
so has part: feature:147854-148000:1:exon
so has part: feature:148247-148401:1:exon
so has part: feature:148749-148858:1:exon
so has part: feature:149022-149145:1:exon

XP_035197096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147029-147113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147628-147717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147854-148000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148247-148401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148749-148858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149022-149145:1:exon

LOC118175199
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(149452..153425)
location: region:149452-153425:-1
so has part: feature:149452-153425:-1:exon
subclass of: SO_0000010

118175199
type: Gene
SIO_000068: ncbigene

position:149452:-1
position: 149452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153425:-1
position: 153425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149452-153425:-1:exon

LOC118175199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175199
product: tripartite motif-containing protein 10-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035341192.1
SIO_010081: LOC118175199
subclass of: SO_0000673
so part of: LOC118175199
location: complement(join(149452..150167,150472..150531,150670..150782,151146..151168,151305..151535,151621..151716,152210..152627,153324..153425))
location: region:149452-153425:-1
so has part: feature:153324-153425:-1:exon
so has part: feature:152210-152627:-1:exon
so has part: feature:151621-151716:-1:exon
so has part: feature:151305-151535:-1:exon
so has part: feature:151146-151168:-1:exon
so has part: feature:150670-150782:-1:exon
so has part: feature:150472-150531:-1:exon
so has part: feature:149452-150167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153324-153425:-1:exon

position:153324:-1
position: 153324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152210-152627:-1:exon

position:152210:-1
position: 152210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152627:-1
position: 152627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151621-151716:-1:exon

position:151621:-1
position: 151621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151716:-1
position: 151716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151305-151535:-1:exon

position:151305:-1
position: 151305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151535:-1
position: 151535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151146-151168:-1:exon

position:151146:-1
position: 151146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151168:-1
position: 151168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150670-150782:-1:exon

position:150670:-1
position: 150670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150782:-1
position: 150782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:150472-150531:-1:exon

position:150472:-1
position: 150472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150531:-1
position: 150531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:149452-150167:-1:exon

position:150167:-1
position: 150167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175199
product: tripartite motif-containing protein 10-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035341193.1
SIO_010081: LOC118175199
subclass of: SO_0000673
so part of: LOC118175199
location: complement(join(149452..150167,150472..150531,150670..150782,151146..151168,151305..151535,151621..151716,152210..152635,152974..153111,153323..153421))
location: region:149452-153421:-1
so has part: feature:153323-153421:-1:exon
so has part: feature:152974-153111:-1:exon
so has part: feature:152210-152635:-1:exon
so has part: feature:151621-151716:-1:exon
so has part: feature:151305-151535:-1:exon
so has part: feature:151146-151168:-1:exon
so has part: feature:150670-150782:-1:exon
so has part: feature:150472-150531:-1:exon
so has part: feature:149452-150167:-1:exon

position:153421:-1
position: 153421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153323-153421:-1:exon

position:153323:-1
position: 153323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152974-153111:-1:exon

position:152974:-1
position: 152974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153111:-1
position: 153111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152210-152635:-1:exon

position:152635:-1
position: 152635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151621-151716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151305-151535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151146-151168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150670-150782:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:150472-150531:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149452-150167:-1:exon

LOC118175199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175199
product: tripartite motif-containing protein 10-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_035341191.1
SIO_010081: LOC118175199
subclass of: SO_0000673
so part of: LOC118175199
location: complement(join(149452..150167,150472..150531,150670..150782,151146..151168,151305..151535,151621..151716,152210..152944))
location: region:149452-152944:-1
so has part: feature:152210-152944:-1:exon
so has part: feature:151621-151716:-1:exon
so has part: feature:151305-151535:-1:exon
so has part: feature:151146-151168:-1:exon
so has part: feature:150670-150782:-1:exon
so has part: feature:150472-150531:-1:exon
so has part: feature:149452-150167:-1:exon

position:152944:-1
position: 152944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152210-152944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151621-151716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151305-151535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151146-151168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150670-150782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150472-150531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149452-150167:-1:exon

LOC118175199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10-like isoform X1
translation: MFTPVQAARGRGRGEAGDAAMASAASRARERGEEGTHHTATKHRPDPEHLSGGGGAAKSRPERGRLGDAEAVSHRNHLRKGNFQPKLHLEHLAEKLKLLGLEGGGEEEQLCSWRKRTFAFREDAKASGRGAPRAHGGAHGEEPAQERREQIQRDLESLKKQREELLELKASGERRCQGYLTQTEAERQKIVSEFRQLRRFLKDQELVLLAQLGELDREVMRRQEEEEAKVSGEVSLLDILIWEMEKKLEQPASGFLQGGRSTVGRWEMGSGRRTMETSDLERRLRVISQQNDILREALGRFQDILPSELEKEVEPSLGGEGKAFVTLDPDTAHARLVLSRDRRGVRWTDAGQDLPPDPRCFDVSCCVLGCRGFSAGRHGWEVEVMAGGTWALGVARNSLPRKGCLEFRPEEGIWAVGCCGNRYRAFSSPPATLPTSGNPKRIRVVLDYEGEQVAFYLTAQLPPVFAFQKACFGGESIFPFFWVGRGSHLHLCA
SIO_010081: LOC118175199
subclass of: SO_0000673
so part of: LOC118175199
location: complement(join(149653..150167,150472..150531,150670..150782,151146..151168,151305..151535,151621..151716,152210..152653))
location: region:149653-152653:-1
so has part: feature:152210-152653:-1:exon
so has part: feature:151621-151716:-1:exon
so has part: feature:151305-151535:-1:exon
so has part: feature:151146-151168:-1:exon
so has part: feature:150670-150782:-1:exon
so has part: feature:150472-150531:-1:exon
so has part: feature:149653-150167:-1:exon

XP_035197082.1
type: Protein
SIO_000068: ncbiprotein

position:149653:-1
position: 149653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152653:-1
position: 152653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152210-152653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151621-151716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151305-151535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151146-151168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150670-150782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150472-150531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149653-150167:-1:exon

LOC118175199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10-like isoform X2
translation: MASAASRARERGEEGTHHTATKHRPDPEHLSGGGGAAKSRPERGRLGDAEAVSHRNHLRKGNFQPKLHLEHLAEKLKLLGLEGGGEEEQLCSWRKRTFAFREDAKASGRGAPRAHGGAHGEEPAQERREQIQRDLESLKKQREELLELKASGERRCQGYLTQTEAERQKIVSEFRQLRRFLKDQELVLLAQLGELDREVMRRQEEEEAKVSGEVSLLDILIWEMEKKLEQPASGFLQGGRSTVGRWEMGSGRRTMETSDLERRLRVISQQNDILREALGRFQDILPSELEKEVEPSLGGEGKAFVTLDPDTAHARLVLSRDRRGVRWTDAGQDLPPDPRCFDVSCCVLGCRGFSAGRHGWEVEVMAGGTWALGVARNSLPRKGCLEFRPEEGIWAVGCCGNRYRAFSSPPATLPTSGNPKRIRVVLDYEGEQVAFYLTAQLPPVFAFQKACFGGESIFPFFWVGRGSHLHLCA
SIO_010081: LOC118175199
subclass of: SO_0000673
so part of: LOC118175199
location: complement(join(149653..150167,150472..150531,150670..150782,151146..151168,151305..151535,151621..151716,152210..152593))
location: region:149653-152593:-1
so has part: feature:152210-152593:-1:exon
so has part: feature:151621-151716:-1:exon
so has part: feature:151305-151535:-1:exon
so has part: feature:151146-151168:-1:exon
so has part: feature:150670-150782:-1:exon
so has part: feature:150472-150531:-1:exon
so has part: feature:149653-150167:-1:exon

XP_035197083.1
type: Protein
SIO_000068: ncbiprotein

position:152593:-1
position: 152593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152210-152593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151621-151716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151305-151535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151146-151168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150670-150782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150472-150531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149653-150167:-1:exon

LOC118175199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 10-like isoform X2
translation: MASAASRARERGEEGTHHTATKHRPDPEHLSGGGGAAKSRPERGRLGDAEAVSHRNHLRKGNFQPKLHLEHLAEKLKLLGLEGGGEEEQLCSWRKRTFAFREDAKASGRGAPRAHGGAHGEEPAQERREQIQRDLESLKKQREELLELKASGERRCQGYLTQTEAERQKIVSEFRQLRRFLKDQELVLLAQLGELDREVMRRQEEEEAKVSGEVSLLDILIWEMEKKLEQPASGFLQGGRSTVGRWEMGSGRRTMETSDLERRLRVISQQNDILREALGRFQDILPSELEKEVEPSLGGEGKAFVTLDPDTAHARLVLSRDRRGVRWTDAGQDLPPDPRCFDVSCCVLGCRGFSAGRHGWEVEVMAGGTWALGVARNSLPRKGCLEFRPEEGIWAVGCCGNRYRAFSSPPATLPTSGNPKRIRVVLDYEGEQVAFYLTAQLPPVFAFQKACFGGESIFPFFWVGRGSHLHLCA
SIO_010081: LOC118175199
subclass of: SO_0000673
so part of: LOC118175199
location: complement(join(149653..150167,150472..150531,150670..150782,151146..151168,151305..151535,151621..151716,152210..152593))
location: region:149653-152593:-1
so has part: feature:152210-152593:-1:exon
so has part: feature:151621-151716:-1:exon
so has part: feature:151305-151535:-1:exon
so has part: feature:151146-151168:-1:exon
so has part: feature:150670-150782:-1:exon
so has part: feature:150472-150531:-1:exon
so has part: feature:149653-150167:-1:exon

XP_035197084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152210-152593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151621-151716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151305-151535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151146-151168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150670-150782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150472-150531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149653-150167:-1:exon

LOC118175175
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(154383..170264)
location: region:154383-170264:-1
so has part: feature:154383-170264:-1:exon
subclass of: SO_0000010

118175175
type: Gene
SIO_000068: ncbigene

position:154383:-1
position: 154383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170264:-1
position: 170264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154383-170264:-1:exon

LOC118175175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175175
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341144.1
SIO_010081: LOC118175175
subclass of: SO_0000673
so part of: LOC118175175
location: complement(join(154383..155231,155571..155591,155689..155709,156498..156518,156815..156835,156934..156954,157115..157135,157573..157593,157875..157895,158279..158299,158571..158591,158879..158899,159157..159177,159492..159512,159958..159978,160392..160412,160919..160939,161215..161235,161760..161780,161872..161892,162205..162225,162505..162525,162850..162870,163081..163101,163456..163476,163828..163848,163971..163991,164176..164196,164585..164605,164905..164925,165363..165383,165629..165649,166240..166260,166512..166517,166952..166972,167298..167318,167434..167454,167540..167560,167868..167888,168134..168198,169747..170264))
location: region:154383-170264:-1
so has part: feature:169747-170264:-1:exon
so has part: feature:168134-168198:-1:exon
so has part: feature:167868-167888:-1:exon
so has part: feature:167540-167560:-1:exon
so has part: feature:167434-167454:-1:exon
so has part: feature:167298-167318:-1:exon
so has part: feature:166952-166972:-1:exon
so has part: feature:166512-166517:-1:exon
so has part: feature:166240-166260:-1:exon
so has part: feature:165629-165649:-1:exon
so has part: feature:165363-165383:-1:exon
so has part: feature:164905-164925:-1:exon
so has part: feature:164585-164605:-1:exon
so has part: feature:164176-164196:-1:exon
so has part: feature:163971-163991:-1:exon
so has part: feature:163828-163848:-1:exon
so has part: feature:163456-163476:-1:exon
so has part: feature:163081-163101:-1:exon
so has part: feature:162850-162870:-1:exon
so has part: feature:162505-162525:-1:exon
so has part: feature:162205-162225:-1:exon
so has part: feature:161872-161892:-1:exon
so has part: feature:161760-161780:-1:exon
so has part: feature:161215-161235:-1:exon
so has part: feature:160919-160939:-1:exon
so has part: feature:160392-160412:-1:exon
so has part: feature:159958-159978:-1:exon
so has part: feature:159492-159512:-1:exon
so has part: feature:159157-159177:-1:exon
so has part: feature:158879-158899:-1:exon
so has part: feature:158571-158591:-1:exon
so has part: feature:158279-158299:-1:exon
so has part: feature:157875-157895:-1:exon
so has part: feature:157573-157593:-1:exon
so has part: feature:157115-157135:-1:exon
so has part: feature:156934-156954:-1:exon
so has part: feature:156815-156835:-1:exon
so has part: feature:156498-156518:-1:exon
so has part: feature:155689-155709:-1:exon
so has part: feature:155571-155591:-1:exon
so has part: feature:154383-155231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169747-170264:-1:exon

position:169747:-1
position: 169747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168134-168198:-1:exon

position:168134:-1
position: 168134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168198:-1
position: 168198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167868-167888:-1:exon

position:167868:-1
position: 167868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167888:-1
position: 167888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167540-167560:-1:exon

position:167540:-1
position: 167540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167560:-1
position: 167560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167434-167454:-1:exon

position:167434:-1
position: 167434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167454:-1
position: 167454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167298-167318:-1:exon

position:167298:-1
position: 167298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167318:-1
position: 167318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:166952-166972:-1:exon

position:166952:-1
position: 166952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166972:-1
position: 166972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:166512-166517:-1:exon

position:166512:-1
position: 166512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166517:-1
position: 166517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:166240-166260:-1:exon

position:166240:-1
position: 166240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166260:-1
position: 166260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:165629-165649:-1:exon

position:165629:-1
position: 165629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165649:-1
position: 165649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:165363-165383:-1:exon

position:165363:-1
position: 165363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165383:-1
position: 165383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:164905-164925:-1:exon

position:164905:-1
position: 164905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164925:-1
position: 164925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:164585-164605:-1:exon

position:164585:-1
position: 164585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164605:-1
position: 164605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:164176-164196:-1:exon

position:164176:-1
position: 164176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164196:-1
position: 164196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:163971-163991:-1:exon

position:163971:-1
position: 163971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163991:-1
position: 163991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:163828-163848:-1:exon

position:163828:-1
position: 163828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163848:-1
position: 163848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:163456-163476:-1:exon

position:163456:-1
position: 163456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163476:-1
position: 163476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:163081-163101:-1:exon

position:163081:-1
position: 163081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163101:-1
position: 163101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:162850-162870:-1:exon

position:162850:-1
position: 162850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162870:-1
position: 162870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:162505-162525:-1:exon

position:162505:-1
position: 162505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162525:-1
position: 162525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:162205-162225:-1:exon

position:162205:-1
position: 162205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162225:-1
position: 162225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:161872-161892:-1:exon

position:161872:-1
position: 161872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161892:-1
position: 161892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:161760-161780:-1:exon

position:161760:-1
position: 161760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161780:-1
position: 161780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:161215-161235:-1:exon

position:161215:-1
position: 161215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161235:-1
position: 161235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:160919-160939:-1:exon

position:160919:-1
position: 160919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160939:-1
position: 160939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:160392-160412:-1:exon

position:160392:-1
position: 160392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160412:-1
position: 160412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:159958-159978:-1:exon

position:159958:-1
position: 159958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159978:-1
position: 159978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:159492-159512:-1:exon

position:159492:-1
position: 159492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159512:-1
position: 159512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:159157-159177:-1:exon

position:159157:-1
position: 159157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159177:-1
position: 159177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:158879-158899:-1:exon

position:158879:-1
position: 158879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158899:-1
position: 158899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:158571-158591:-1:exon

position:158571:-1
position: 158571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158591:-1
position: 158591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:158279-158299:-1:exon

position:158279:-1
position: 158279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158299:-1
position: 158299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:157875-157895:-1:exon

position:157875:-1
position: 157875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157895:-1
position: 157895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:157573-157593:-1:exon

position:157573:-1
position: 157573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157593:-1
position: 157593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:157115-157135:-1:exon

position:157115:-1
position: 157115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157135:-1
position: 157135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:156934-156954:-1:exon

position:156934:-1
position: 156934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156954:-1
position: 156954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:156815-156835:-1:exon

position:156815:-1
position: 156815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156835:-1
position: 156835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:156498-156518:-1:exon

position:156498:-1
position: 156498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156518:-1
position: 156518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:155689-155709:-1:exon

position:155689:-1
position: 155689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155709:-1
position: 155709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:155571-155591:-1:exon

position:155571:-1
position: 155571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155591:-1
position: 155591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:154383-155231:-1:exon

position:155231:-1
position: 155231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MMESGKTNADLEEWDAKIRKLTEEFEESDTELEECDTENEIGELTAEIDNLTAELEERDRKIRKLTSDLGECDTKIKERDRKITKLSAEIRRLTALLGDRDKKLRKLTAELAKCDATIRIFTVELGERHTKIGELTAEVGDYDRKLRKHAAELAERDEKIREHEAEIRRLTELLDELTEELDEVTEELGERDKKIEELTEELAKQTAQIGELTTELGERDAKIDELSAEMEKRDRKIDELTAELEEYKAKMRKCIEEHRKEEEKLANVTLDPETAHPRLILSKDQKSVRWEYMLQESPDSPERFDADPCVLGCEAFTSGRHYWVVDLAEGQYCAVGVSRESLPRKGPISFNPEEGIWAVQQWGFKNRALTSPPTLLNLPRVPKKIRISLDYEWGEVAFFDVENKVPIFTFPPASFAGERIRPWFWVELGSLSLVR
SIO_010081: LOC118175175
subclass of: SO_0000673
so part of: LOC118175175
location: complement(join(154720..155231,155571..155591,155689..155709,156498..156518,156815..156835,156934..156954,157115..157135,157573..157593,157875..157895,158279..158299,158571..158591,158879..158899,159157..159177,159492..159512,159958..159978,160392..160412,160919..160939,161215..161235,161760..161780,161872..161892,162205..162225,162505..162525,162850..162870,163081..163101,163456..163476,163828..163848,163971..163991,164176..164196,164585..164605,164905..164925,165363..165383,165629..165649,166240..166260,166512..166517,166952..166972,167298..167318,167434..167454,167540..167560,167868..167888,168134..168146))
location: region:154720-168146:-1
so has part: feature:168134-168146:-1:exon
so has part: feature:167868-167888:-1:exon
so has part: feature:167540-167560:-1:exon
so has part: feature:167434-167454:-1:exon
so has part: feature:167298-167318:-1:exon
so has part: feature:166952-166972:-1:exon
so has part: feature:166512-166517:-1:exon
so has part: feature:166240-166260:-1:exon
so has part: feature:165629-165649:-1:exon
so has part: feature:165363-165383:-1:exon
so has part: feature:164905-164925:-1:exon
so has part: feature:164585-164605:-1:exon
so has part: feature:164176-164196:-1:exon
so has part: feature:163971-163991:-1:exon
so has part: feature:163828-163848:-1:exon
so has part: feature:163456-163476:-1:exon
so has part: feature:163081-163101:-1:exon
so has part: feature:162850-162870:-1:exon
so has part: feature:162505-162525:-1:exon
so has part: feature:162205-162225:-1:exon
so has part: feature:161872-161892:-1:exon
so has part: feature:161760-161780:-1:exon
so has part: feature:161215-161235:-1:exon
so has part: feature:160919-160939:-1:exon
so has part: feature:160392-160412:-1:exon
so has part: feature:159958-159978:-1:exon
so has part: feature:159492-159512:-1:exon
so has part: feature:159157-159177:-1:exon
so has part: feature:158879-158899:-1:exon
so has part: feature:158571-158591:-1:exon
so has part: feature:158279-158299:-1:exon
so has part: feature:157875-157895:-1:exon
so has part: feature:157573-157593:-1:exon
so has part: feature:157115-157135:-1:exon
so has part: feature:156934-156954:-1:exon
so has part: feature:156815-156835:-1:exon
so has part: feature:156498-156518:-1:exon
so has part: feature:155689-155709:-1:exon
so has part: feature:155571-155591:-1:exon
so has part: feature:154720-155231:-1:exon

XP_035197035.1
type: Protein
SIO_000068: ncbiprotein

position:154720:-1
position: 154720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168146:-1
position: 168146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168134-168146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167868-167888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167540-167560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167434-167454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167298-167318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166952-166972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:166512-166517:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166240-166260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165629-165649:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165363-165383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:164905-164925:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:164585-164605:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:164176-164196:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163971-163991:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:163828-163848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:163456-163476:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:163081-163101:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:162850-162870:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:162505-162525:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:162205-162225:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:161872-161892:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:161760-161780:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:161215-161235:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:160919-160939:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:160392-160412:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:159958-159978:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:159492-159512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:159157-159177:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:158879-158899:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:158571-158591:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:158279-158299:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:157875-157895:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:157573-157593:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:157115-157135:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:156934-156954:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:156815-156835:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:156498-156518:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:155689-155709:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:155571-155591:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:154720-155231:-1:exon

RACK1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 174604..179286
location: region:174604-179286:1
so has part: feature:174604-179286:1:exon
subclass of: SO_0000010

118175204
type: Gene
SIO_000068: ncbigene

position:174604:1
position: 174604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179286:1
position: 179286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174604-179286:1:exon

RACK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RACK1
product: receptor for activated C kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035341199.1
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: join(174604..174820,175662..175833,176521..176668,177013..177108,177263..177373,178125..178265,178667..178777,179147..179286)
location: region:174604-179286:1
so has part: feature:174604-174820:1:exon
so has part: feature:175662-175833:1:exon
so has part: feature:176521-176668:1:exon
so has part: feature:177013-177108:1:exon
so has part: feature:177263-177373:1:exon
so has part: feature:178125-178265:1:exon
so has part: feature:178667-178777:1:exon
so has part: feature:179147-179286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174604-174820:1:exon

position:174820:1
position: 174820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175662-175833:1:exon

position:175662:1
position: 175662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175833:1
position: 175833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176521-176668:1:exon

position:176521:1
position: 176521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176668:1
position: 176668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177013-177108:1:exon

position:177013:1
position: 177013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177108:1
position: 177108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177263-177373:1:exon

position:177263:1
position: 177263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177373:1
position: 177373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:178125-178265:1:exon

position:178125:1
position: 178125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178265:1
position: 178265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:178667-178777:1:exon

position:178667:1
position: 178667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178777:1
position: 178777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:179147-179286:1:exon

position:179147:1
position: 179147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor of activated protein C kinase 1
translation: MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: join(174712..174820,175662..175833,176521..176668,177013..177108,177263..177373,178125..178265,178667..178777,179147..179212)
location: region:174712-179212:1
so has part: feature:174712-174820:1:exon
so has part: feature:175662-175833:1:exon
so has part: feature:176521-176668:1:exon
so has part: feature:177013-177108:1:exon
so has part: feature:177263-177373:1:exon
so has part: feature:178125-178265:1:exon
so has part: feature:178667-178777:1:exon
so has part: feature:179147-179212:1:exon

XP_035197090.1
type: Protein
SIO_000068: ncbiprotein

position:174712:1
position: 174712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179212:1
position: 179212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174712-174820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175662-175833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176521-176668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177013-177108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177263-177373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:178125-178265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:178667-178777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179147-179212:1:exon

TRIM41
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(180369..186599)
location: region:180369-186599:-1
so has part: feature:180369-186599:-1:exon
subclass of: SO_0000010

118175190
type: Gene
SIO_000068: ncbigene

position:180369:-1
position: 180369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186599:-1
position: 186599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180369-186599:-1:exon

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TRIM41
product: tripartite motif containing 41, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_035341172.1
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(180369..181139,181183..181717,182174..182301,183001..183023,183659..183889,184464..184559,185638..186219,186346..186599))
location: region:180369-186599:-1
so has part: feature:186346-186599:-1:exon
so has part: feature:185638-186219:-1:exon
so has part: feature:184464-184559:-1:exon
so has part: feature:183659-183889:-1:exon
so has part: feature:183001-183023:-1:exon
so has part: feature:182174-182301:-1:exon
so has part: feature:181183-181717:-1:exon
so has part: feature:180369-181139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186346-186599:-1:exon

position:186346:-1
position: 186346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185638-186219:-1:exon

position:185638:-1
position: 185638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186219:-1
position: 186219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184464-184559:-1:exon

position:184464:-1
position: 184464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184559:-1
position: 184559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183659-183889:-1:exon

position:183659:-1
position: 183659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183889:-1
position: 183889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:183001-183023:-1:exon

position:183001:-1
position: 183001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183023:-1
position: 183023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182174-182301:-1:exon

position:182174:-1
position: 182174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182301:-1
position: 182301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181183-181717:-1:exon

position:181183:-1
position: 181183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181717:-1
position: 181717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:180369-181139:-1:exon

position:181139:-1
position: 181139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TRIM41
product: tripartite motif containing 41, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_035341170.1
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(180369..181139,181183..181717,182174..182301,183001..183023,183659..183889,184464..184559,185638..186599))
location: region:180369-186599:-1
so has part: feature:185638-186599:-1:exon
so has part: feature:184464-184559:-1:exon
so has part: feature:183659-183889:-1:exon
so has part: feature:183001-183023:-1:exon
so has part: feature:182174-182301:-1:exon
so has part: feature:181183-181717:-1:exon
so has part: feature:180369-181139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185638-186599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184464-184559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183659-183889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183001-183023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182174-182301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181183-181717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180369-181139:-1:exon

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41 isoform X2
translation: MAVVGDGGSGGRLNPVETLQEEAICAICLDYFVEPVSIGCGHNFCRVCISQLWGGEAEYEAAPGAAAAGGGGAEEEEDMWSEEEDDAELWEEPVEEDIWDGGVGGELYFGDEDYDEDVMEEDVEEEEEVEEEEEEVQTPPPPVLAARPRRLQTFTCPQCRKTFFQRNFRPNLQLANMVQIIRQLHPHPQRLAPPAAGPSASGAAAGGPGVLVAVGGQGPPNLCEKHQEPLKLFCEVDEQAICVVCRESRSHKHHSVVPLEEVVQDYKNKLQSHLEPLKKKLDAVLKQKSNEEEKITELRDKMKLEIKEFESDFELLHQFLIGEQVLLLHQLEERYESLLVRQSSNISQLEEQSAALSRLIAEAEDKSKQDGLQLLKDIKGTFIRCENIKFQEPEMVPVDVGKKYRNYFLQDVVMRKMEKVFSKVPQADITLDPDTAHPRLSLSLDRRSVKLGERCKDLPDNPKRFDSDYCVLGSQGFTAGRHYWEVEVGGRRGWAVGAARETARRKEKTVGPHQKREIWCVGTNGKKYQALTATEQTALSPSERPRRFGVYLDYERGQLCFYNAESMTHIHTFNASFHERIFPFFRILAKGTRIKICA
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(181200..181717,182174..182301,183001..183023,183659..183889,184464..184559,185638..186219,186346..186564))
location: region:181200-186564:-1
so has part: feature:186346-186564:-1:exon
so has part: feature:185638-186219:-1:exon
so has part: feature:184464-184559:-1:exon
so has part: feature:183659-183889:-1:exon
so has part: feature:183001-183023:-1:exon
so has part: feature:182174-182301:-1:exon
so has part: feature:181200-181717:-1:exon

XP_035197063.1
type: Protein
SIO_000068: ncbiprotein

position:181200:-1
position: 181200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186564:-1
position: 186564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186346-186564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185638-186219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184464-184559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183659-183889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183001-183023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182174-182301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181200-181717:-1:exon

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41 isoform X1
translation: MAVVGDGGSGGRLNPVETLQEEAICAICLDYFVEPVSIGCGHNFCRVCISQLWGGEAEYEAAPGAAAAGGGGAVGMSDVLEEELEDEEDELDDDELEVEQEEEEEEEEDGGGGAEEEEEDMWSEEEDDAELWEEPVEEDIWDGGVGGELYFGDEDYDEDVMEEDVEEEEEVEEEEEEVQTPPPPVLAARPRRLQTFTCPQCRKTFFQRNFRPNLQLANMVQIIRQLHPHPQRLAPPAAGPSASGAAAGGPGVLVAVGGQGPPNLCEKHQEPLKLFCEVDEQAICVVCRESRSHKHHSVVPLEEVVQDYKNKLQSHLEPLKKKLDAVLKQKSNEEEKITELRDKMKLEIKEFESDFELLHQFLIGEQVLLLHQLEERYESLLVRQSSNISQLEEQSAALSRLIAEAEDKSKQDGLQLLKDIKGTFIRCENIKFQEPEMVPVDVGKKYRNYFLQDVVMRKMEKVFSKVPQADITLDPDTAHPRLSLSLDRRSVKLGERCKDLPDNPKRFDSDYCVLGSQGFTAGRHYWEVEVGGRRGWAVGAARETARRKEKTVGPHQKREIWCVGTNGKKYQALTATEQTALSPSERPRRFGVYLDYERGQLCFYNAESMTHIHTFNASFHERIFPFFRILAKGTRIKICA
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(181200..181717,182174..182301,183001..183023,183659..183889,184464..184559,185638..186564))
location: region:181200-186564:-1
so has part: feature:185638-186564:-1:exon
so has part: feature:184464-184559:-1:exon
so has part: feature:183659-183889:-1:exon
so has part: feature:183001-183023:-1:exon
so has part: feature:182174-182301:-1:exon
so has part: feature:181200-181717:-1:exon

XP_035197061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185638-186564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184464-184559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183659-183889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183001-183023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182174-182301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181200-181717:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 187348..187420
location: region:187348-187420:1
so has part: feature:187348-187420:1:exon
subclass of: SO_0000663

118175215
type: Gene
SIO_000068: ncbigene

position:187348:1
position: 187348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187420:1
position: 187420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187348-187420:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:187381..187383,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 187348..187420
location: region:187348-187420:1
so has part: feature:187348-187420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187348-187420:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 187597..187669
location: region:187597-187669:1
so has part: feature:187597-187669:1:exon
subclass of: SO_0000663

118175227
type: Gene
SIO_000068: ncbigene

position:187597:1
position: 187597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187669:1
position: 187669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187597-187669:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:187630..187632,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 187597..187669
location: region:187597-187669:1
so has part: feature:187597-187669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187597-187669:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 187939..188011
location: region:187939-188011:1
so has part: feature:187939-188011:1:exon
subclass of: SO_0000663

118175238
type: Gene
SIO_000068: ncbigene

position:187939:1
position: 187939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188011:1
position: 188011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187939-188011:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:187972..187974,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 187939..188011
location: region:187939-188011:1
so has part: feature:187939-188011:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187939-188011:1:exon

LOC118175196
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 190099..196130
location: region:190099-196130:1
so has part: feature:190099-196130:1:exon
subclass of: SO_0000010

118175196
type: Gene
SIO_000068: ncbigene

position:190099:1
position: 190099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196130:1
position: 196130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190099-196130:1:exon

LOC118175196
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175196
product: zinc finger protein RFP-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035341184.1
SIO_010081: LOC118175196
subclass of: SO_0000673
so part of: LOC118175196
location: join(190099..190672,192158..192253,192985..193215,193739..193793,194035..194220,195125..195157,195499..196130)
location: region:190099-196130:1
so has part: feature:190099-190672:1:exon
so has part: feature:192158-192253:1:exon
so has part: feature:192985-193215:1:exon
so has part: feature:193739-193793:1:exon
so has part: feature:194035-194220:1:exon
so has part: feature:195125-195157:1:exon
so has part: feature:195499-196130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190099-190672:1:exon

position:190672:1
position: 190672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192158-192253:1:exon

position:192158:1
position: 192158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192253:1
position: 192253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192985-193215:1:exon

position:192985:1
position: 192985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193215:1
position: 193215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193739-193793:1:exon

position:193739:1
position: 193739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193793:1
position: 193793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194035-194220:1:exon

position:194035:1
position: 194035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194220:1
position: 194220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195125-195157:1:exon

position:195125:1
position: 195125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195157:1
position: 195157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:195499-196130:1:exon

position:195499:1
position: 195499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175196
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175196
product: zinc finger protein RFP-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035341185.1
SIO_010081: LOC118175196
subclass of: SO_0000673
so part of: LOC118175196
location: join(190118..190672,192158..192253,192985..193215,193739..193761,194105..194220,195125..195157,195499..196130)
location: region:190118-196130:1
so has part: feature:190118-190672:1:exon
so has part: feature:192158-192253:1:exon
so has part: feature:192985-193215:1:exon
so has part: feature:193739-193761:1:exon
so has part: feature:194105-194220:1:exon
so has part: feature:195125-195157:1:exon
so has part: feature:195499-196130:1:exon

position:190118:1
position: 190118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190118-190672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192158-192253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192985-193215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193739-193761:1:exon

position:193761:1
position: 193761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194105-194220:1:exon

position:194105:1
position: 194105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195125-195157:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195499-196130:1:exon

LOC118175196
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X1
translation: MAECDPLESLQKEASCSICLDYFSDPVSINCGHSFCRDCITRCSGKSDRRFSCPQCRGIAQKRKFRPNRELRNLAEIAKKLMSRVGDAARAGGVCPKHQEPLKLFCQEDQAAICVVCDRSQAHRAHTVAPIEEAAQECKEHIQSKLKSLRDERERLQGLKAMGEKRSQKHLQQARAERWKIMSVFKQLHQFQDEQERLLLMWLEDTEKEIVQTQSENDRRISAEISHLGNLIRELEGMNPQPENKSLQDARSALTRYVALCPQHSVTSPRGFFLHSLFGKEGIQKSSPSRCDARAFQHLTEKFPRVEKSLKDLSQKNIILKEALRKFKESLLVELDVQWANVTLDPDTANPHLVLSEDRRSVRWDETPQNLPDNPQRFDTYCSVLGHEGFTAGRHYWEVQLGNRGFWAVGVARDSAWRKGWISLDPSQGIWAVGICGDSFQAFTSFETVQPLNGRPRTIRVSLDYDKGHVAFFDADNETLAFAFTPTSFNGEKILPFFWVWESRIRLAP
SIO_010081: LOC118175196
subclass of: SO_0000673
so part of: LOC118175196
location: join(190256..190672,192158..192253,192985..193215,193739..193793,194035..194220,195125..195157,195499..196010)
location: region:190256-196010:1
so has part: feature:190256-190672:1:exon
so has part: feature:192158-192253:1:exon
so has part: feature:192985-193215:1:exon
so has part: feature:193739-193793:1:exon
so has part: feature:194035-194220:1:exon
so has part: feature:195125-195157:1:exon
so has part: feature:195499-196010:1:exon

XP_035197075.1
type: Protein
SIO_000068: ncbiprotein

position:190256:1
position: 190256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196010:1
position: 196010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190256-190672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192158-192253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192985-193215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193739-193793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194035-194220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195125-195157:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195499-196010:1:exon

LOC118175196
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like isoform X2
translation: MAECDPLESLQKEASCSICLDYFSDPVSINCGHSFCRDCITRCSGKSDRRFSCPQCRGIAQKRKFRPNRELRNLAEIAKKLMSRVGDAARAGGVCPKHQEPLKLFCQEDQAAICVVCDRSQAHRAHTVAPIEEAAQECKEHIQSKLKSLRDERERLQGLKAMGEKRSQKHLQQARAERWKIMSVFKQLHQFQDEQERLLLMWLEDTEKEIVQTQSENDRRISAEISHLGNLIRELEGMNPQPENKSLQDARSALTRCDARAFQHLTEKFPRVEKSLKDLSQKNIILKEALRKFKESLLVELDVQWANVTLDPDTANPHLVLSEDRRSVRWDETPQNLPDNPQRFDTYCSVLGHEGFTAGRHYWEVQLGNRGFWAVGVARDSAWRKGWISLDPSQGIWAVGICGDSFQAFTSFETVQPLNGRPRTIRVSLDYDKGHVAFFDADNETLAFAFTPTSFNGEKILPFFWVWESRIRLAP
SIO_010081: LOC118175196
subclass of: SO_0000673
so part of: LOC118175196
location: join(190256..190672,192158..192253,192985..193215,193739..193761,194105..194220,195125..195157,195499..196010)
location: region:190256-196010:1
so has part: feature:190256-190672:1:exon
so has part: feature:192158-192253:1:exon
so has part: feature:192985-193215:1:exon
so has part: feature:193739-193761:1:exon
so has part: feature:194105-194220:1:exon
so has part: feature:195125-195157:1:exon
so has part: feature:195499-196010:1:exon

XP_035197076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190256-190672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192158-192253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192985-193215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193739-193761:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194105-194220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195125-195157:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195499-196010:1:exon

LOC118175208
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 197467..198112
location: region:197467-198112:1
so has part: feature:197467-198112:1:exon
subclass of: SO_0000011

118175208
type: Gene
SIO_000068: ncbigene

position:197467:1
position: 197467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198112:1
position: 198112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197467-198112:1:exon

LOC118175208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118175208
product: uncharacterized LOC118175208
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XR_004754915.1
SIO_010081: LOC118175208
subclass of: SO_0000673
so part of: LOC118175208
location: join(197467..197642,197811..198112)
location: region:197467-198112:1
so has part: feature:197467-197642:1:exon
so has part: feature:197811-198112:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197467-197642:1:exon

position:197642:1
position: 197642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197811-198112:1:exon

position:197811:1
position: 197811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175197
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175197
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 198659..203892
location: region:198659-203892:1
so has part: feature:198659-203892:1:exon
subclass of: SO_0000010

118175197
type: Gene
SIO_000068: ncbigene

position:198659:1
position: 198659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203892:1
position: 203892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198659-203892:1:exon

LOC118175197
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175197
product: zinc finger protein RFP-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_035341186.1
SIO_010081: LOC118175197
subclass of: SO_0000673
so part of: LOC118175197
location: join(198659..199239,200167..200259,201209..201439,201536..201558,201694..201809,202460..202489,202837..203892)
location: region:198659-203892:1
so has part: feature:198659-199239:1:exon
so has part: feature:200167-200259:1:exon
so has part: feature:201209-201439:1:exon
so has part: feature:201536-201558:1:exon
so has part: feature:201694-201809:1:exon
so has part: feature:202460-202489:1:exon
so has part: feature:202837-203892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198659-199239:1:exon

position:199239:1
position: 199239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200167-200259:1:exon

position:200167:1
position: 200167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200259:1
position: 200259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201209-201439:1:exon

position:201209:1
position: 201209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201439:1
position: 201439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:201536-201558:1:exon

position:201536:1
position: 201536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201558:1
position: 201558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201694-201809:1:exon

position:201694:1
position: 201694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201809:1
position: 201809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:202460-202489:1:exon

position:202460:1
position: 202460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202489:1
position: 202489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:202837-203892:1:exon

position:202837:1
position: 202837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175197
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175197
product: zinc finger protein RFP-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035341187.1
SIO_010081: LOC118175197
subclass of: SO_0000673
so part of: LOC118175197
location: join(198659..199239,200167..200259,201209..201439,201536..201558,201694..201809,202837..203892)
location: region:198659-203892:1
so has part: feature:198659-199239:1:exon
so has part: feature:200167-200259:1:exon
so has part: feature:201209-201439:1:exon
so has part: feature:201536-201558:1:exon
so has part: feature:201694-201809:1:exon
so has part: feature:202837-203892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198659-199239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200167-200259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201209-201439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201536-201558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201694-201809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202837-203892:1:exon

LOC118175197
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175197
product: zinc finger protein RFP-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035341188.1
SIO_010081: LOC118175197
subclass of: SO_0000673
so part of: LOC118175197
location: join(198659..199239,201209..201439,201536..201558,201694..201809,202460..202489,202837..203892)
location: region:198659-203892:1
so has part: feature:198659-199239:1:exon
so has part: feature:201209-201439:1:exon
so has part: feature:201536-201558:1:exon
so has part: feature:201694-201809:1:exon
so has part: feature:202460-202489:1:exon
so has part: feature:202837-203892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198659-199239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201209-201439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201536-201558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201694-201809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202460-202489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202837-203892:1:exon

LOC118175197
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175197
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like isoform X1
translation: MASQSPSESLQGEASCSICLGYFQEPVSIPCGHNFCRECITRCWEGLEANFSCPQCRQTASHKSFRPSRELAKIAEIARQLSLQAGRGAEGGEGWCQQHQEALKLFCKEDQQPICTVCDRSQAHRLHTVLPAEEAAQEYKEEIQARLQLLKEEREKYLESRKSRARKNLHLEKTKNEGKKIVCEFEQLHQFLKDQERLLLTQLAELDRAISRVQEEAVVKVSEEMAHLDTLIWEMEGKFQQPASKFLLDIRRLLQSCEVMKFNPPVEISPDLERRLEDFLQKNVLVRCTLRKCQDSLMFKLQEPTNVTLDPATAHPNLHLSEDRKQVRGQLVPQDLPDNPERFDFEPCVLGCQGFTSGRHFWEVEVGQGGVWALGVARETAKRKGPMSLTPKEGIWALEAYHSLTSPRANVRLNQLPRRIRVSLDYEGGRVAFFSSDDDAPILVYGRASFNGERVLPWFKMGMGARLQEITQNSSSEEQSMTGQLMSPLDWVGFRCPLRICP
SIO_010081: LOC118175197
subclass of: SO_0000673
so part of: LOC118175197
location: join(198820..199239,200167..200259,201209..201439,201536..201558,201694..201809,202460..202489,202837..203432)
location: region:198820-203432:1
so has part: feature:198820-199239:1:exon
so has part: feature:200167-200259:1:exon
so has part: feature:201209-201439:1:exon
so has part: feature:201536-201558:1:exon
so has part: feature:201694-201809:1:exon
so has part: feature:202460-202489:1:exon
so has part: feature:202837-203432:1:exon

XP_035197077.1
type: Protein
SIO_000068: ncbiprotein

position:198820:1
position: 198820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203432:1
position: 203432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198820-199239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200167-200259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201209-201439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201536-201558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201694-201809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202460-202489:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:202837-203432:1:exon

LOC118175197
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175197
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like isoform X2
translation: MASQSPSESLQGEASCSICLGYFQEPVSIPCGHNFCRECITRCWEGLEANFSCPQCRQTASHKSFRPSRELAKIAEIARQLSLQAGRGAEGGEGWCQQHQEALKLFCKEDQQPICTVCDRSQAHRLHTVLPAEEAAQEYKEEIQARLQLLKEEREKYLESRKSRARKNLHLEKTKNEGKKIVCEFEQLHQFLKDQERLLLTQLAELDRAISRVQEEAVVKVSEEMAHLDTLIWEMEGKFQQPASKFLLDIRRLLQSCEVMKFNPPVEISPDLERRLEDFLQKNVLVRCTLRKCQANVTLDPATAHPNLHLSEDRKQVRGQLVPQDLPDNPERFDFEPCVLGCQGFTSGRHFWEVEVGQGGVWALGVARETAKRKGPMSLTPKEGIWALEAYHSLTSPRANVRLNQLPRRIRVSLDYEGGRVAFFSSDDDAPILVYGRASFNGERVLPWFKMGMGARLQEITQNSSSEEQSMTGQLMSPLDWVGFRCPLRICP
SIO_010081: LOC118175197
subclass of: SO_0000673
so part of: LOC118175197
location: join(198820..199239,200167..200259,201209..201439,201536..201558,201694..201809,202837..203432)
location: region:198820-203432:1
so has part: feature:198820-199239:1:exon
so has part: feature:200167-200259:1:exon
so has part: feature:201209-201439:1:exon
so has part: feature:201536-201558:1:exon
so has part: feature:201694-201809:1:exon
so has part: feature:202837-203432:1:exon

XP_035197078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198820-199239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200167-200259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201209-201439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201536-201558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201694-201809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202837-203432:1:exon

LOC118175197
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175197
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like isoform X3
translation: MASQSPSESLQGEASCSICLGYFQEPVSIPCGHNFCRECITRCWEGLEANFSCPQCRQTASHKSFRPSRELAKIAEIARQLSLQAGRGAEGGEGWCQQHQEALKLFCKEDQQPICTVCDRSQAHRLHTVLPAEEAAQEYKEKTKNEGKKIVCEFEQLHQFLKDQERLLLTQLAELDRAISRVQEEAVVKVSEEMAHLDTLIWEMEGKFQQPASKFLLDIRRLLQSCEVMKFNPPVEISPDLERRLEDFLQKNVLVRCTLRKCQDSLMFKLQEPTNVTLDPATAHPNLHLSEDRKQVRGQLVPQDLPDNPERFDFEPCVLGCQGFTSGRHFWEVEVGQGGVWALGVARETAKRKGPMSLTPKEGIWALEAYHSLTSPRANVRLNQLPRRIRVSLDYEGGRVAFFSSDDDAPILVYGRASFNGERVLPWFKMGMGARLQEITQNSSSEEQSMTGQLMSPLDWVGFRCPLRICP
SIO_010081: LOC118175197
subclass of: SO_0000673
so part of: LOC118175197
location: join(198820..199239,201209..201439,201536..201558,201694..201809,202460..202489,202837..203432)
location: region:198820-203432:1
so has part: feature:198820-199239:1:exon
so has part: feature:201209-201439:1:exon
so has part: feature:201536-201558:1:exon
so has part: feature:201694-201809:1:exon
so has part: feature:202460-202489:1:exon
so has part: feature:202837-203432:1:exon

XP_035197079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198820-199239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201209-201439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201536-201558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201694-201809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202460-202489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202837-203432:1:exon

LOC118175205
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 206087..210519
location: region:206087-210519:1
so has part: feature:206087-210519:1:exon
subclass of: SO_0000010

118175205
type: Gene
SIO_000068: ncbigene

position:206087:1
position: 206087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210519:1
position: 210519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206087-210519:1:exon

LOC118175205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175205
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341200.1
SIO_010081: LOC118175205
subclass of: SO_0000673
so part of: LOC118175205
location: join(206087..207007,207561..207583,208060..208175,209660..210519)
location: region:206087-210519:1
so has part: feature:206087-207007:1:exon
so has part: feature:207561-207583:1:exon
so has part: feature:208060-208175:1:exon
so has part: feature:209660-210519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206087-207007:1:exon

position:207007:1
position: 207007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207561-207583:1:exon

position:207561:1
position: 207561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207583:1
position: 207583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208060-208175:1:exon

position:208060:1
position: 208060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208175:1
position: 208175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209660-210519:1:exon

position:209660:1
position: 209660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MPLHEFLVVFPVPLLLCLHLKRDGEKLSPGKPCLDFGFPGGYELFLLSQLEDLKNEIEKRQAKATTKLSEEISQLDSLTKAQDKKSQQSDVKSLVTRCGKVTFQLPVNVSPEPEERFCHFSWRNSALKETLKKLQASITLDPDTAHPDLILSEDRKSVRRGEARRDLPDNPERFDYWPFVLGYQSFATGRHCWEVEVGDEGDWAVGVAKESIARKGQLSLCPKGGIWGVEKWGGQIRALTTRKVTLLPLRMLPRRVSVHLDYAGGTVAFFDADEGGLIFIFSRAAFTGERVHPWLWVVGARSQLRLCP
SIO_010081: LOC118175205
subclass of: SO_0000673
so part of: LOC118175205
location: join(206741..207007,207561..207583,208060..208175,209660..210180)
location: region:206741-210180:1
so has part: feature:206741-207007:1:exon
so has part: feature:207561-207583:1:exon
so has part: feature:208060-208175:1:exon
so has part: feature:209660-210180:1:exon

XP_035197091.1
type: Protein
SIO_000068: ncbiprotein

position:206741:1
position: 206741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210180:1
position: 210180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206741-207007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207561-207583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208060-208175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209660-210180:1:exon

LOC118175198
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(211646..216583)
location: region:211646-216583:-1
so has part: feature:211646-216583:-1:exon
subclass of: SO_0000010

118175198
type: Gene
SIO_000068: ncbigene

position:211646:-1
position: 211646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216583:-1
position: 216583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211646-216583:-1:exon

LOC118175198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175198
product: E3 ubiquitin-protein ligase TRIM7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035341190.1
SIO_010081: LOC118175198
subclass of: SO_0000673
so part of: LOC118175198
location: complement(join(211646..212454,212951..212980,213801..213916,214176..214198,214319..214549,214973..215068,215754..216583))
location: region:211646-216583:-1
so has part: feature:215754-216583:-1:exon
so has part: feature:214973-215068:-1:exon
so has part: feature:214319-214549:-1:exon
so has part: feature:214176-214198:-1:exon
so has part: feature:213801-213916:-1:exon
so has part: feature:212951-212980:-1:exon
so has part: feature:211646-212454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215754-216583:-1:exon

position:215754:-1
position: 215754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214973-215068:-1:exon

position:214973:-1
position: 214973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215068:-1
position: 215068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214319-214549:-1:exon

position:214319:-1
position: 214319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214549:-1
position: 214549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214176-214198:-1:exon

position:214176:-1
position: 214176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214198:-1
position: 214198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:213801-213916:-1:exon

position:213801:-1
position: 213801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213916:-1
position: 213916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212951-212980:-1:exon

position:212951:-1
position: 212951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212980:-1
position: 212980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211646-212454:-1:exon

position:212454:-1
position: 212454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like
translation: MGRETPFPRAEENESRWLAVVCTGGPMAAPSPVAKLPSEASCPICLEYFRDPVSIHCGHNFCRACITRCWEWSTANFSCPQCKETAPERSFRPSRELARVLEIAKRLSLQAARGEAVEEEGCERHREPLNVFCKDDETFICMICRESRVHRTHTMLPVQEAVQEYKGQIQAHLQTLKEDRDRLLGFREAEMRRNWEYLEKTEAERQKVLGTFEGLRLFLEDQARYLLAQLAELERAVEKMQEENITNLTKEISHLDTLIQEMEEKCQEPASKFLQDIRGTLSRFGKENFQQPTLLLPELENKISHFREKNIALEETLGNFKDILMFELPEKMNVTLDPSTAHPQLAVSEDRRSVRWEDAQQDAPDEGFGPDPSVLGCEGITSGRCCWEVEVTPKGSWAVGVARESLKRREETPVSPEVELWSMGLCEDQFWALTSFERTPLSQIQVPRRVRITLDYERGQVAFFDVDRKALIFIFSAASFKGDSVHPWFLVWSEGSQITLCP
SIO_010081: LOC118175198
subclass of: SO_0000673
so part of: LOC118175198
location: complement(join(211940..212454,212951..212980,213801..213916,214176..214198,214319..214549,214973..215068,215754..216251))
location: region:211940-216251:-1
so has part: feature:215754-216251:-1:exon
so has part: feature:214973-215068:-1:exon
so has part: feature:214319-214549:-1:exon
so has part: feature:214176-214198:-1:exon
so has part: feature:213801-213916:-1:exon
so has part: feature:212951-212980:-1:exon
so has part: feature:211940-212454:-1:exon

XP_035197081.1
type: Protein
SIO_000068: ncbiprotein

position:211940:-1
position: 211940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216251:-1
position: 216251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215754-216251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214973-215068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214319-214549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214176-214198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213801-213916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212951-212980:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211940-212454:-1:exon

LOC118175201
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220095..225295
location: region:220095-225295:1
so has part: feature:220095-225295:1:exon
subclass of: SO_0000010

118175201
type: Gene
SIO_000068: ncbigene

position:220095:1
position: 220095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225295:1
position: 225295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220095-225295:1:exon

LOC118175201
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175201
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035341197.1
SIO_010081: LOC118175201
subclass of: SO_0000673
so part of: LOC118175201
location: join(220095..220581,221538..221633,222325..222555,223238..223260,223908..224011,224679..225295)
location: region:220095-225295:1
so has part: feature:220095-220581:1:exon
so has part: feature:221538-221633:1:exon
so has part: feature:222325-222555:1:exon
so has part: feature:223238-223260:1:exon
so has part: feature:223908-224011:1:exon
so has part: feature:224679-225295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220095-220581:1:exon

position:220581:1
position: 220581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221538-221633:1:exon

position:221538:1
position: 221538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221633:1
position: 221633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222325-222555:1:exon

position:222325:1
position: 222325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222555:1
position: 222555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:223238-223260:1:exon

position:223238:1
position: 223238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223260:1
position: 223260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:223908-224011:1:exon

position:223908:1
position: 223908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224011:1
position: 224011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:224679-225295:1:exon

position:224679:1
position: 224679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175201
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MAEDIPAESFQDEASCSICLGFFQDPVSIHCGHNFCRACITRCWEEEEANFTCPRCKETAPRRNLRPNRELAKIIEIAKRLSLQAAKGGAGGERLCEKHQEALKLFCEEDQTPICLVCRESQAHRAHPVVPIEEAAEEHKEKFQAHVQILKDRREKLLGLKMAEEGRSLNFLERVEEERQKVVAEIKELHQFVERQEQLLLGQLAKLDQEIVRRQEENIARLLEEISSVGEQIRELEEKCQQPAYELLQDSRNILSRLEKESAQKPPEASPELAETPQKNIALKEMLMKFQVSLTLDPETAHPRLVLSEDRKRVRWEDTRQPVPDNPKRFDSSRCVLGCEGFSTGRHYWEVEVGDGEAWAVGVAKESVRRKGRISVNPEVGIWAVGQCGSQYQALTSPTSPISLLAAPRVIGIYLDYEAGRVAFFDSHNQAPIFTYPPTSFAGEQILPLLCLGRGCQFTLSP
SIO_010081: LOC118175201
subclass of: SO_0000673
so part of: LOC118175201
location: join(220162..220581,221538..221633,222325..222555,223238..223260,223908..224011,224679..225193)
location: region:220162-225193:1
so has part: feature:220162-220581:1:exon
so has part: feature:221538-221633:1:exon
so has part: feature:222325-222555:1:exon
so has part: feature:223238-223260:1:exon
so has part: feature:223908-224011:1:exon
so has part: feature:224679-225193:1:exon

XP_035197088.1
type: Protein
SIO_000068: ncbiprotein

position:220162:1
position: 220162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225193:1
position: 225193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220162-220581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221538-221633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222325-222555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223238-223260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223908-224011:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:224679-225193:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 226227..226298
location: region:226227-226298:1
so has part: feature:226227-226298:1:exon
subclass of: SO_0000663

118175240
type: Gene
SIO_000068: ncbigene

position:226227:1
position: 226227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226298:1
position: 226298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226227-226298:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:226260..226262,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 226227..226298
location: region:226227-226298:1
so has part: feature:226227-226298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226227-226298:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(226905..226977)
location: region:226905-226977:-1
so has part: feature:226905-226977:-1:exon
subclass of: SO_0000663

118175232
type: Gene
SIO_000068: ncbigene

position:226905:-1
position: 226905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226977:-1
position: 226977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226905-226977:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(226942..226944),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(226905..226977)
location: region:226905-226977:-1
so has part: feature:226905-226977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226905-226977:-1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(227518..227625)
location: region:227518-227625:-1
so has part: feature:227518-227625:-1:exon
subclass of: SO_0000663

118175233
type: Gene
SIO_000068: ncbigene

position:227518:-1
position: 227518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227625:-1
position: 227625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227518-227625:-1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(227589..227591),aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: complement(join(227518..227563,227588..227625))
location: region:227518-227625:-1
so has part: feature:227588-227625:-1:exon
so has part: feature:227518-227563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227588-227625:-1:exon

position:227588:-1
position: 227588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227518-227563:-1:exon

position:227563:-1
position: 227563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(227811..227883)
location: region:227811-227883:-1
so has part: feature:227811-227883:-1:exon
subclass of: SO_0000663

118175234
type: Gene
SIO_000068: ncbigene

position:227811:-1
position: 227811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227883:-1
position: 227883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227811-227883:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(227848..227850),aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(227811..227883)
location: region:227811-227883:-1
so has part: feature:227811-227883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227811-227883:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 228261..228333
location: region:228261-228333:1
so has part: feature:228261-228333:1:exon
subclass of: SO_0000663

118175241
type: Gene
SIO_000068: ncbigene

position:228261:1
position: 228261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228333:1
position: 228333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228261-228333:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:228294..228296,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 228261..228333
location: region:228261-228333:1
so has part: feature:228261-228333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228261-228333:1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(228559..228630)
location: region:228559-228630:-1
so has part: feature:228559-228630:-1:exon
subclass of: SO_0000663

118175235
type: Gene
SIO_000068: ncbigene

position:228559:-1
position: 228559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228630:-1
position: 228630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228559-228630:-1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(228595..228597),aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: complement(228559..228630)
location: region:228559-228630:-1
so has part: feature:228559-228630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228559-228630:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 229174..229245
location: region:229174-229245:1
so has part: feature:229174-229245:1:exon
subclass of: SO_0000663

118175216
type: Gene
SIO_000068: ncbigene

position:229174:1
position: 229174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229245:1
position: 229245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229174-229245:1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:229207..229209,aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: 229174..229245
location: region:229174-229245:1
so has part: feature:229174-229245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229174-229245:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 229584..229656
location: region:229584-229656:1
so has part: feature:229584-229656:1:exon
subclass of: SO_0000663

118175217
type: Gene
SIO_000068: ncbigene

position:229584:1
position: 229584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229656:1
position: 229656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229584-229656:1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:229617..229619,aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: 229584..229656
location: region:229584-229656:1
so has part: feature:229584-229656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229584-229656:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 230037..230109
location: region:230037-230109:1
so has part: feature:230037-230109:1:exon
subclass of: SO_0000663

118175218
type: Gene
SIO_000068: ncbigene

position:230037:1
position: 230037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230109:1
position: 230109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230037-230109:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:230070..230072,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 230037..230109
location: region:230037-230109:1
so has part: feature:230037-230109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230037-230109:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 230531..230603
location: region:230531-230603:1
so has part: feature:230531-230603:1:exon
subclass of: SO_0000663

118175219
type: Gene
SIO_000068: ncbigene

position:230531:1
position: 230531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230603:1
position: 230603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230531-230603:1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:230564..230566,aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: 230531..230603
location: region:230531-230603:1
so has part: feature:230531-230603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230531-230603:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 231000..231072
location: region:231000-231072:1
so has part: feature:231000-231072:1:exon
subclass of: SO_0000663

118175220
type: Gene
SIO_000068: ncbigene

position:231000:1
position: 231000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231072:1
position: 231072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231000-231072:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:231033..231035,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 231000..231072
location: region:231000-231072:1
so has part: feature:231000-231072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231000-231072:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 232714..232785
location: region:232714-232785:1
so has part: feature:232714-232785:1:exon
subclass of: SO_0000663

118175221
type: Gene
SIO_000068: ncbigene

position:232714:1
position: 232714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232785:1
position: 232785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232714-232785:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:232747..232749,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 232714..232785
location: region:232714-232785:1
so has part: feature:232714-232785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232714-232785:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 233110..233182
location: region:233110-233182:1
so has part: feature:233110-233182:1:exon
subclass of: SO_0000663

118175222
type: Gene
SIO_000068: ncbigene

position:233110:1
position: 233110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233182:1
position: 233182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233110-233182:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:233143..233145,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 233110..233182
location: region:233110-233182:1
so has part: feature:233110-233182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233110-233182:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 235243..235315
location: region:235243-235315:1
so has part: feature:235243-235315:1:exon
subclass of: SO_0000663

118175223
type: Gene
SIO_000068: ncbigene

position:235243:1
position: 235243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235315:1
position: 235315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235243-235315:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:235276..235278,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 235243..235315
location: region:235243-235315:1
so has part: feature:235243-235315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235243-235315:1:exon

LOC118175209
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(238135..241704)
location: region:238135-241704:-1
so has part: feature:238135-241704:-1:exon
subclass of: SO_0000011

118175209
type: Gene
SIO_000068: ncbigene

position:238135:-1
position: 238135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241704:-1
position: 241704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238135-241704:-1:exon

LOC118175209
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118175209
product: uncharacterized LOC118175209, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004754917.1
SIO_010081: LOC118175209
subclass of: SO_0000673
so part of: LOC118175209
location: complement(join(238135..238209,238842..238936,241300..241391,241522..241704))
location: region:238135-241704:-1
so has part: feature:241522-241704:-1:exon
so has part: feature:241300-241391:-1:exon
so has part: feature:238842-238936:-1:exon
so has part: feature:238135-238209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241522-241704:-1:exon

position:241522:-1
position: 241522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241300-241391:-1:exon

position:241300:-1
position: 241300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241391:-1
position: 241391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238842-238936:-1:exon

position:238842:-1
position: 238842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238936:-1
position: 238936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:238135-238209:-1:exon

position:238209:-1
position: 238209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175209
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118175209
product: uncharacterized LOC118175209, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004754916.1
SIO_010081: LOC118175209
subclass of: SO_0000673
so part of: LOC118175209
location: complement(join(238780..238936,241300..241391,241522..241704))
location: region:238780-241704:-1
so has part: feature:241522-241704:-1:exon
so has part: feature:241300-241391:-1:exon
so has part: feature:238780-238936:-1:exon

position:238780:-1
position: 238780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241522-241704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241300-241391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238780-238936:-1:exon

LOC118175193
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 239308..250802
location: region:239308-250802:1
so has part: feature:239308-250802:1:exon
subclass of: SO_0000010

118175193
type: Gene
SIO_000068: ncbigene

position:239308:1
position: 239308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250802:1
position: 250802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239308-250802:1:exon

LOC118175193
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175193
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035341179.1
SIO_010081: LOC118175193
subclass of: SO_0000673
so part of: LOC118175193
location: join(239308..239409,239505..239668,241696..242122,242893..242988,243708..243938,245649..245671,246326..246441,247249..247284,247503..247575,249431..249565)
location: region:239308-249565:1
so has part: feature:239308-239409:1:exon
so has part: feature:239505-239668:1:exon
so has part: feature:241696-242122:1:exon
so has part: feature:242893-242988:1:exon
so has part: feature:243708-243938:1:exon
so has part: feature:245649-245671:1:exon
so has part: feature:246326-246441:1:exon
so has part: feature:247249-247284:1:exon
so has part: feature:247503-247575:1:exon
so has part: feature:249431-249565:1:exon

position:249565:1
position: 249565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239308-239409:1:exon

position:239409:1
position: 239409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239505-239668:1:exon

position:239505:1
position: 239505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239668:1
position: 239668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241696-242122:1:exon

position:241696:1
position: 241696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242122:1
position: 242122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:242893-242988:1:exon

position:242893:1
position: 242893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242988:1
position: 242988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:243708-243938:1:exon

position:243708:1
position: 243708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243938:1
position: 243938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:245649-245671:1:exon

position:245649:1
position: 245649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245671:1
position: 245671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:246326-246441:1:exon

position:246326:1
position: 246326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246441:1
position: 246441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:247249-247284:1:exon

position:247249:1
position: 247249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247284:1
position: 247284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:247503-247575:1:exon

position:247503:1
position: 247503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247575:1
position: 247575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:249431-249565:1:exon

position:249431:1
position: 249431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175193
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175193
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035341177.1
SIO_010081: LOC118175193
subclass of: SO_0000673
so part of: LOC118175193
location: join(239313..239409,239505..239668,241696..242122,242893..242988,243708..243938,245649..245671,246326..246441,247249..247284,249431..250802)
location: region:239313-250802:1
so has part: feature:239313-239409:1:exon
so has part: feature:239505-239668:1:exon
so has part: feature:241696-242122:1:exon
so has part: feature:242893-242988:1:exon
so has part: feature:243708-243938:1:exon
so has part: feature:245649-245671:1:exon
so has part: feature:246326-246441:1:exon
so has part: feature:247249-247284:1:exon
so has part: feature:249431-250802:1:exon

position:239313:1
position: 239313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239313-239409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239505-239668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241696-242122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242893-242988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243708-243938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245649-245671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246326-246441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247249-247284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:249431-250802:1:exon

LOC118175193
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175193
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035341178.1
SIO_010081: LOC118175193
subclass of: SO_0000673
so part of: LOC118175193
location: join(239345..239409,241696..242122,242893..242988,243708..243938,245649..245671,246326..246441,247249..247284,249431..250802)
location: region:239345-250802:1
so has part: feature:239345-239409:1:exon
so has part: feature:241696-242122:1:exon
so has part: feature:242893-242988:1:exon
so has part: feature:243708-243938:1:exon
so has part: feature:245649-245671:1:exon
so has part: feature:246326-246441:1:exon
so has part: feature:247249-247284:1:exon
so has part: feature:249431-250802:1:exon

position:239345:1
position: 239345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239345-239409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241696-242122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242893-242988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243708-243938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245649-245671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246326-246441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247249-247284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:249431-250802:1:exon

LOC118175193
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X2
translation: MGEGKEWREAMAAMFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIIKSWKDLEMDFPCPQCREVFQQKSFRPNRQLANMAEIISQFALRGAKGAEEDGLCAKHREALKLYCKDDRRTICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLKKERQELLEFKVNDDKKTQELLKTIENERQKLLVEFEGLRQFLHDQEHILLGQLEKMEKSIAKRQNENISDLSKEITLLNKLITELEEKIQQPMLEFLKDVMSIISRSDDVKSHKPVPVCTDMKMHVCNFSLKTVVLEKVLKKFKENLRDELGRGEKEDLTLDPESANHLLILSADLKSVRMGCRKQELPDNPKRFDTNSRVLASTGFKSGRHYWEVEVGASDGWAFGVAKESVRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLSQKLNKVRVYLDYEGEEVSFYNADNMQHIFTFNVAFQEKVFPLFSVCSTVTYIKLCP
SIO_010081: LOC118175193
subclass of: SO_0000673
so part of: LOC118175193
location: join(239390..239409,241696..242122,242893..242988,243708..243938,245649..245671,246326..246441,247249..247284,249431..249945)
location: region:239390-249945:1
so has part: feature:239390-239409:1:exon
so has part: feature:241696-242122:1:exon
so has part: feature:242893-242988:1:exon
so has part: feature:243708-243938:1:exon
so has part: feature:245649-245671:1:exon
so has part: feature:246326-246441:1:exon
so has part: feature:247249-247284:1:exon
so has part: feature:249431-249945:1:exon

XP_035197069.1
type: Protein
SIO_000068: ncbiprotein

position:239390:1
position: 239390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249945:1
position: 249945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239390-239409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241696-242122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242893-242988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243708-243938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245649-245671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246326-246441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247249-247284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:249431-249945:1:exon

LOC118175193
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X1
translation: MGLGWFPPPQWPAVVPRYLLLCPWVLGPIGIPANTLPMQKAGRFVRTPLSYTSAARREAMAAMFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIIKSWKDLEMDFPCPQCREVFQQKSFRPNRQLANMAEIISQFALRGAKGAEEDGLCAKHREALKLYCKDDRRTICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLKKERQELLEFKVNDDKKTQELLKTIENERQKLLVEFEGLRQFLHDQEHILLGQLEKMEKSIAKRQNENISDLSKEITLLNKLITELEEKIQQPMLEFLKDVMSIISRSDDVKSHKPVPVCTDMKMHVCNFSLKTVVLEKVLKKFKENLRDELGRGEKEDLTLDPESANHLLILSADLKSVRMGCRKQELPDNPKRFDTNSRVLASTGFKSGRHYWEVEVGASDGWAFGVAKESVRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLSQKLNKVRVYLDYEGEEVSFYNADNMQHIFTFNVAFQEKVFPLFSVCSTVTYIKLCP
SIO_010081: LOC118175193
subclass of: SO_0000673
so part of: LOC118175193
location: join(239407..239409,239505..239668,241696..242122,242893..242988,243708..243938,245649..245671,246326..246441,247249..247284,249431..249945)
location: region:239407-249945:1
so has part: feature:239407-239409:1:exon
so has part: feature:239505-239668:1:exon
so has part: feature:241696-242122:1:exon
so has part: feature:242893-242988:1:exon
so has part: feature:243708-243938:1:exon
so has part: feature:245649-245671:1:exon
so has part: feature:246326-246441:1:exon
so has part: feature:247249-247284:1:exon
so has part: feature:249431-249945:1:exon

XP_035197068.1
type: Protein
SIO_000068: ncbiprotein

position:239407:1
position: 239407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239407-239409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239505-239668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241696-242122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242893-242988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243708-243938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245649-245671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246326-246441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247249-247284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:249431-249945:1:exon

LOC118175193
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X3
translation: MGLGWFPPPQWPAVVPRYLLLCPWVLGPIGIPANTLPMQKAGRFVRTPLSYTSAARREAMAAMFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIIKSWKDLEMDFPCPQCREVFQQKSFRPNRQLANMAEIISQFALRGAKGAEEDGLCAKHREALKLYCKDDRRTICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLKKERQELLEFKVNDDKKTQELLKTIENERQKLLVEFEGLRQFLHDQEHILLGQLEKMEKSIAKRQNENISDLSKEITLLNKLITELEEKIQQPMLEFLKDVMSIISRSDDVKSHKPVPVCTDMKMHVCNFSLKTVVLEKVLKKFKENLRDELGRGEKDPACSVQESKADFSS
SIO_010081: LOC118175193
subclass of: SO_0000673
so part of: LOC118175193
location: join(239407..239409,239505..239668,241696..242122,242893..242988,243708..243938,245649..245671,246326..246441,247249..247284,247503..247549)
location: region:239407-247549:1
so has part: feature:239407-239409:1:exon
so has part: feature:239505-239668:1:exon
so has part: feature:241696-242122:1:exon
so has part: feature:242893-242988:1:exon
so has part: feature:243708-243938:1:exon
so has part: feature:245649-245671:1:exon
so has part: feature:246326-246441:1:exon
so has part: feature:247249-247284:1:exon
so has part: feature:247503-247549:1:exon

XP_035197070.1
type: Protein
SIO_000068: ncbiprotein

position:247549:1
position: 247549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239407-239409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239505-239668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241696-242122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242893-242988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243708-243938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245649-245671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246326-246441:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247249-247284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247503-247549:1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 252663..252735
location: region:252663-252735:1
so has part: feature:252663-252735:1:exon
subclass of: SO_0000663

118175224
type: Gene
SIO_000068: ncbigene

position:252663:1
position: 252663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252735:1
position: 252735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252663-252735:1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:252696..252698,aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: 252663..252735
location: region:252663-252735:1
so has part: feature:252663-252735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252663-252735:1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 252900..252971
location: region:252900-252971:1
so has part: feature:252900-252971:1:exon
subclass of: SO_0000663

118175225
type: Gene
SIO_000068: ncbigene

position:252900:1
position: 252900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252971:1
position: 252971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252900-252971:1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:252932..252934,aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: 252900..252971
location: region:252900-252971:1
so has part: feature:252900-252971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252900-252971:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 254235..254307
location: region:254235-254307:1
so has part: feature:254235-254307:1:exon
subclass of: SO_0000663

118175228
type: Gene
SIO_000068: ncbigene

position:254235:1
position: 254235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254307:1
position: 254307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254235-254307:1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:254268..254270,aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: 254235..254307
location: region:254235-254307:1
so has part: feature:254235-254307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254235-254307:1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(254659..254740)
location: region:254659-254740:-1
so has part: feature:254659-254740:-1:exon
subclass of: SO_0000663

118175236
type: Gene
SIO_000068: ncbigene

position:254659:-1
position: 254659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254740:-1
position: 254740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254659-254740:-1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(254704..254706),aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: complement(254659..254740)
location: region:254659-254740:-1
so has part: feature:254659-254740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254659-254740:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 255655..255727
location: region:255655-255727:1
so has part: feature:255655-255727:1:exon
subclass of: SO_0000663

118175229
type: Gene
SIO_000068: ncbigene

position:255655:1
position: 255655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255727:1
position: 255727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255655-255727:1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:255688..255690,aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: 255655..255727
location: region:255655-255727:1
so has part: feature:255655-255727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255655-255727:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 256521..256594
location: region:256521-256594:1
so has part: feature:256521-256594:1:exon
subclass of: SO_0000663

118175230
type: Gene
SIO_000068: ncbigene

position:256521:1
position: 256521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256594:1
position: 256594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256521-256594:1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:256555..256557,aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: 256521..256594
location: region:256521-256594:1
so has part: feature:256521-256594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256521-256594:1:exon

IL4I1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(257640..263168)
location: region:257640-263168:-1
so has part: feature:257640-263168:-1:exon
subclass of: SO_0000010

118175194
type: Gene
SIO_000068: ncbigene

position:257640:-1
position: 257640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263168:-1
position: 263168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257640-263168:-1:exon

IL4I1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: IL4I1
product: interleukin 4 induced 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035341181.1
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: complement(join(257640..258789,258984..259120,259486..259554,259939..260140,260499..260611,261257..261471,263108..263168))
location: region:257640-263168:-1
so has part: feature:263108-263168:-1:exon
so has part: feature:261257-261471:-1:exon
so has part: feature:260499-260611:-1:exon
so has part: feature:259939-260140:-1:exon
so has part: feature:259486-259554:-1:exon
so has part: feature:258984-259120:-1:exon
so has part: feature:257640-258789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263108-263168:-1:exon

position:263108:-1
position: 263108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261257-261471:-1:exon

position:261257:-1
position: 261257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261471:-1
position: 261471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260499-260611:-1:exon

position:260499:-1
position: 260499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260611:-1
position: 260611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:259939-260140:-1:exon

position:259939:-1
position: 259939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260140:-1
position: 260140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:259486-259554:-1:exon

position:259486:-1
position: 259486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259554:-1
position: 259554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258984-259120:-1:exon

position:258984:-1
position: 258984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259120:-1
position: 259120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:257640-258789:-1:exon

position:258789:-1
position: 258789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL4I1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-amino-acid oxidase
translation: MAGTVLFQILLLVGLVSAKRFSCFPEYCLHDKDYEELLDIVRDGLGPATQPANVVIVGAGISGLTAAKLLQDAGHKVTILETSNRVGGRIRTYREEGQDWYVELGAMRLPGKHRLVREFIRQFDLKLNPFLQSDNNTWYFVNGVRARAGDVDRNPDILNYKLHPWERGKSASQLYREALHKAFKKFQTMDCKEYLTKHDSFSTKEYLIKVGNLSRGAVQMIGDLLNEDSGFYLSFLASLWDFDIFSEEESFDEITGGFDQLPKAFHEALPDVVKFNCTVEKIMTKGGKVRVFYRAPDTLAPSIATADYVLVTSSAKATRHIQFFPPLSSPKTHALRSIHYASASKIVLACTEKFWEKDGIRGGHSITDRPSRFIYYPSHNFSSGVGVILASYTWNEDAEFFLPLTDEKCLDVVLQDLADIHQVSKEYLQYTCDRYVIQKWQLDKHSLGAFAAFTPYQFTDFSRALFEHEGRVHFAGEHAAQPHAWIDTSMKAAVRAASNIHDDSEARTLGENEELLEDFLEKDEL
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: complement(join(257961..258789,258984..259120,259486..259554,259939..260140,260499..260611,261257..261471,263108..263120))
location: region:257961-263120:-1
so has part: feature:263108-263120:-1:exon
so has part: feature:261257-261471:-1:exon
so has part: feature:260499-260611:-1:exon
so has part: feature:259939-260140:-1:exon
so has part: feature:259486-259554:-1:exon
so has part: feature:258984-259120:-1:exon
so has part: feature:257961-258789:-1:exon

XP_035197072.1
type: Protein
SIO_000068: ncbiprotein

position:257961:-1
position: 257961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263120:-1
position: 263120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263108-263120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261257-261471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260499-260611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259939-260140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259486-259554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258984-259120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257961-258789:-1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(269372..269443)
location: region:269372-269443:-1
so has part: feature:269372-269443:-1:exon
subclass of: SO_0000663

118175237
type: Gene
SIO_000068: ncbigene

position:269372:-1
position: 269372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269443:-1
position: 269443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269372-269443:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(269408..269410),aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(269372..269443)
location: region:269372-269443:-1
so has part: feature:269372-269443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269372-269443:-1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(269783..269891)
location: region:269783-269891:-1
so has part: feature:269783-269891:-1:exon
subclass of: SO_0000663

118175239
type: Gene
SIO_000068: ncbigene

position:269783:-1
position: 269783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269891:-1
position: 269891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269783-269891:-1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(269855..269857),aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: complement(join(269783..269828,269854..269891))
location: region:269783-269891:-1
so has part: feature:269854-269891:-1:exon
so has part: feature:269783-269828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269854-269891:-1:exon

position:269854:-1
position: 269854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269783-269828:-1:exon

position:269828:-1
position: 269828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175176
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271444..273366
location: region:271444-273366:1
so has part: feature:271444-273366:1:exon
subclass of: SO_0000010

118175176
type: Gene
SIO_000068: ncbigene

position:271444:1
position: 271444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273366:1
position: 273366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271444-273366:1:exon

LOC118175176
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175176
product: zinc finger protein CKR1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_035341146.1
SIO_010081: LOC118175176
subclass of: SO_0000673
so part of: LOC118175176
location: join(271444..271531,271970..273366)
location: region:271444-273366:1
so has part: feature:271444-271531:1:exon
so has part: feature:271970-273366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271444-271531:1:exon

position:271531:1
position: 271531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271970-273366:1:exon

position:271970:1
position: 271970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175176
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1-like
translation: MERWVVLDPRQKALYRDVMQESYETLMSLAAQGLVSEKAAEEGAEELEARPSRSPERAKTLGSNRRKTKRPDKAVPHGIAKTPKTPPTPKLDCVKPLRGASGKGAARERPFGCADCGKSFPWASHLERHRRVHTGERPFGCPECGETYSQSSHLLQHRRTHASDRPHKCGECGKRFAGAAELAAHGRGHAAEKPHKCGDCGKGFVWASHLARHRRVHTGEKPFGCPECGEAFTQGSHLAKHRRSHTGERPHRCPVCGKTFCQSSDLARHRRTHLGKKALRCGDCGKLFRAGPALARHQRCHRRERAHRCGDCGKGFVWASHLERHRRIHTGERPFPCGSCGERFAQKAHLLQHRKTHSPDRPYKCGECGKRFGEAPPFLAHQRGHAAQKSYTCGECGKGFAWASHLERHRRVHTGEKPYECPECGEAFSQSSHLTKHRRSHLPKVDFSPARTRPEGEKPPAAPRCAGGSAKPPGDCSEGPRGKLRDGDGAKDSE
SIO_010081: LOC118175176
subclass of: SO_0000673
so part of: LOC118175176
location: join(271444..271531,271970..273366)
location: region:271444-273366:1
so has part: feature:271444-271531:1:exon
so has part: feature:271970-273366:1:exon

XP_035197037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271444-271531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271970-273366:1:exon

LOC118175188
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(274299..278985)
location: region:274299-278985:-1
so has part: feature:274299-278985:-1:exon
subclass of: SO_0000010

118175188
type: Gene
SIO_000068: ncbigene

position:274299:-1
position: 274299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278985:-1
position: 278985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274299-278985:-1:exon

LOC118175188
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175188
product: zinc finger protein 345-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_035341163.1
SIO_010081: LOC118175188
subclass of: SO_0000673
so part of: LOC118175188
location: complement(join(274299..276334,276797..276895,277084..277197,278272..278394,278730..278985))
location: region:274299-278985:-1
so has part: feature:278730-278985:-1:exon
so has part: feature:278272-278394:-1:exon
so has part: feature:277084-277197:-1:exon
so has part: feature:276797-276895:-1:exon
so has part: feature:274299-276334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278730-278985:-1:exon

position:278730:-1
position: 278730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278272-278394:-1:exon

position:278272:-1
position: 278272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278394:-1
position: 278394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277084-277197:-1:exon

position:277084:-1
position: 277084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277197:-1
position: 277197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:276797-276895:-1:exon

position:276797:-1
position: 276797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276895:-1
position: 276895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:274299-276334:-1:exon

position:276334:-1
position: 276334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 345-like
translation: MEPYVLLDPRQRALYRDVMQESYETLMALEFPVSKPDLLSRLAHEDEPTALDLHVPKDAPSGEDGARAEQEPTREGTAEKEPEAAKPTGEDHPSSLAQAKAGRSGEAPPPRAPQPSNTCGECGKSFSHKSALVKHQKIHSGDRPHECPDCGKGFIQRSDLTIHQRVHTGERPYACPDCGRRFSVSSSLLTHQRTHAPGGEKPNRCPQCGRSFADPGALDRHQKSHLGGKPYECGVCGKAFAWSSHLERHRRIHTGEKPFQCAECGRAFAWSSHLDRHMRTHAAAAASEEEDGEEEEEPPPPPPQKCADCGKRLNHQTDPQRFKHKGTQTPPAGAEPAGSPPRPYRCEQCGKSFGHSSNLLKHQRVHSGERPYPCPDCKRCFRWGSALAKHRRTHARQQQQSGQAAKGCAEESGAGGKPYPCGACGKSFGWVSHLERHRRVHTGEKPFRCGECGRAFAVSSHLERHRRVHTGERPYRCGDCGKSFAVSSTLLAHRRTHAAQPGRPHACPECGKGFSTPAGLERHRRLHRGEKPYQCGVCGKGFAWSSHYDRHRLTHTGEKPFSCAHCGKRFGRSSHRNRHQRAHGGPEKRHVCPECGKAFGLATALAAHQRLHATGSGGRSGLSLLPASWWEGERPEGTMTPPELWPEETGSVFQQNPVPSSSSAPRGWAAKALLPPSVAWRSGEGDALQSDAAAPQEPWASLPPPSS
SIO_010081: LOC118175188
subclass of: SO_0000673
so part of: LOC118175188
location: complement(join(274398..276334,276797..276895,277084..277171))
location: region:274398-277171:-1
so has part: feature:277084-277171:-1:exon
so has part: feature:276797-276895:-1:exon
so has part: feature:274398-276334:-1:exon

XP_035197054.1
type: Protein
SIO_000068: ncbiprotein

position:274398:-1
position: 274398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277171:-1
position: 277171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277084-277171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276797-276895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274398-276334:-1:exon

LOC118175195
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281299..287501
location: region:281299-287501:1
so has part: feature:281299-287501:1:exon
subclass of: SO_0000010

118175195
type: Gene
SIO_000068: ncbigene

position:281299:1
position: 281299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287501:1
position: 287501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281299-287501:1:exon

LOC118175195
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175195
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_035341182.1
SIO_010081: LOC118175195
subclass of: SO_0000673
so part of: LOC118175195
location: join(281299..281825,284000..284104,284202..284429,285071..285093,285516..285631,285967..285999,286794..287501)
location: region:281299-287501:1
so has part: feature:281299-281825:1:exon
so has part: feature:284000-284104:1:exon
so has part: feature:284202-284429:1:exon
so has part: feature:285071-285093:1:exon
so has part: feature:285516-285631:1:exon
so has part: feature:285967-285999:1:exon
so has part: feature:286794-287501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281299-281825:1:exon

position:281825:1
position: 281825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284000-284104:1:exon

position:284000:1
position: 284000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284104:1
position: 284104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284202-284429:1:exon

position:284202:1
position: 284202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284429:1
position: 284429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:285071-285093:1:exon

position:285071:1
position: 285071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285093:1
position: 285093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:285516-285631:1:exon

position:285516:1
position: 285516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285631:1
position: 285631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:285967-285999:1:exon

position:285967:1
position: 285967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285999:1
position: 285999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:286794-287501:1:exon

position:286794:1
position: 286794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175195
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175195
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035341183.1
SIO_010081: LOC118175195
subclass of: SO_0000673
so part of: LOC118175195
location: join(281299..281825,284018..284104,284202..284429,285071..285093,285516..285631,285967..285999,286794..287501)
location: region:281299-287501:1
so has part: feature:281299-281825:1:exon
so has part: feature:284018-284104:1:exon
so has part: feature:284202-284429:1:exon
so has part: feature:285071-285093:1:exon
so has part: feature:285516-285631:1:exon
so has part: feature:285967-285999:1:exon
so has part: feature:286794-287501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281299-281825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284018-284104:1:exon

position:284018:1
position: 284018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284202-284429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285071-285093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285516-285631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285967-285999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286794-287501:1:exon

LOC118175195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X1
translation: MEAPPAPPAVPPAPCSAARSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVPQRLFRPNRSLGNIVHIVRQLGLPPGPAEPPPGPPAPSPPLPAAAPPGPPGPPRCPRHGEPLRLFCVQDRRAVCVVCHLSREHRTHTVLPAEEAAHAAEISSAFQEVPQEHLSSLRKGREEAKAERERQSEDLLKQTEVERQKIVAECKELRGFLEEKEQLLLSRLEELDRDIVKRRDESVSRLSEEIAQLDKLLGEQGGENGPGNQPGQVVTTAGSSFESWMFCKPEAGFAELEKKLKSFSQKSAVLKEVLLEFKENLRFELENDTGDLSLDPDTANPYLVLSEDKRSVRLRSAPQELPANPKRFDYSFCVLAAEGFVAGRHYWEVEVGDGESWVLGAARESVRRKEKIDFAPEEGIWAVGLNWKGKNWDQYQAFTSPETPLSLCERPRKIGVYLDYEGGWVAFYNADNMAPIFTFTAAFTEKIFPFFWLFYVGSSLSLCN
SIO_010081: LOC118175195
subclass of: SO_0000673
so part of: LOC118175195
location: join(281313..281825,284000..284104,284202..284429,285071..285093,285516..285631,285967..285999,286794..287320)
location: region:281313-287320:1
so has part: feature:281313-281825:1:exon
so has part: feature:284000-284104:1:exon
so has part: feature:284202-284429:1:exon
so has part: feature:285071-285093:1:exon
so has part: feature:285516-285631:1:exon
so has part: feature:285967-285999:1:exon
so has part: feature:286794-287320:1:exon

XP_035197073.1
type: Protein
SIO_000068: ncbiprotein

position:281313:1
position: 281313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287320:1
position: 287320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281313-281825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284000-284104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284202-284429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285071-285093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285516-285631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285967-285999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286794-287320:1:exon

LOC118175195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X2
translation: MEAPPAPPAVPPAPCSAARSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVPQRLFRPNRSLGNIVHIVRQLGLPPGPAEPPPGPPAPSPPLPAAAPPGPPGPPRCPRHGEPLRLFCVQDRRAVCVVCHLSREHRTHTVLPAEEAAHAAEEVPQEHLSSLRKGREEAKAERERQSEDLLKQTEVERQKIVAECKELRGFLEEKEQLLLSRLEELDRDIVKRRDESVSRLSEEIAQLDKLLGEQGGENGPGNQPGQVVTTAGSSFESWMFCKPEAGFAELEKKLKSFSQKSAVLKEVLLEFKENLRFELENDTGDLSLDPDTANPYLVLSEDKRSVRLRSAPQELPANPKRFDYSFCVLAAEGFVAGRHYWEVEVGDGESWVLGAARESVRRKEKIDFAPEEGIWAVGLNWKGKNWDQYQAFTSPETPLSLCERPRKIGVYLDYEGGWVAFYNADNMAPIFTFTAAFTEKIFPFFWLFYVGSSLSLCN
SIO_010081: LOC118175195
subclass of: SO_0000673
so part of: LOC118175195
location: join(281313..281825,284018..284104,284202..284429,285071..285093,285516..285631,285967..285999,286794..287320)
location: region:281313-287320:1
so has part: feature:281313-281825:1:exon
so has part: feature:284018-284104:1:exon
so has part: feature:284202-284429:1:exon
so has part: feature:285071-285093:1:exon
so has part: feature:285516-285631:1:exon
so has part: feature:285967-285999:1:exon
so has part: feature:286794-287320:1:exon

XP_035197074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281313-281825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284018-284104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284202-284429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285071-285093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285516-285631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285967-285999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286794-287320:1:exon

LOC118175177
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(289628..331337)
location: region:289628-331337:-1
so has part: feature:289628-331337:-1:exon
subclass of: SO_0000010

118175177
type: Gene
SIO_000068: ncbigene

position:289628:-1
position: 289628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331337:-1
position: 331337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289628-331337:-1:exon

LOC118175177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175177
product: zinc finger protein 692-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341147.1
SIO_010081: LOC118175177
subclass of: SO_0000673
so part of: LOC118175177
location: complement(join(289628..289943,290329..290428,291383..291497,291941..292019,292249..292311,294844..294972,295394..295540,295753..295801,296329..296739,297162..297333,331296..331337))
location: region:289628-331337:-1
so has part: feature:331296-331337:-1:exon
so has part: feature:297162-297333:-1:exon
so has part: feature:296329-296739:-1:exon
so has part: feature:295753-295801:-1:exon
so has part: feature:295394-295540:-1:exon
so has part: feature:294844-294972:-1:exon
so has part: feature:292249-292311:-1:exon
so has part: feature:291941-292019:-1:exon
so has part: feature:291383-291497:-1:exon
so has part: feature:290329-290428:-1:exon
so has part: feature:289628-289943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331296-331337:-1:exon

position:331296:-1
position: 331296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297162-297333:-1:exon

position:297162:-1
position: 297162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297333:-1
position: 297333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:296329-296739:-1:exon

position:296329:-1
position: 296329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296739:-1
position: 296739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:295753-295801:-1:exon

position:295753:-1
position: 295753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295801:-1
position: 295801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:295394-295540:-1:exon

position:295394:-1
position: 295394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295540:-1
position: 295540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:294844-294972:-1:exon

position:294844:-1
position: 294844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294972:-1
position: 294972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:292249-292311:-1:exon

position:292249:-1
position: 292249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292311:-1
position: 292311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291941-292019:-1:exon

position:291941:-1
position: 291941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292019:-1
position: 292019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291383-291497:-1:exon

position:291383:-1
position: 291383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291497:-1
position: 291497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:290329-290428:-1:exon

position:290329:-1
position: 290329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290428:-1
position: 290428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:289628-289943:-1:exon

position:289943:-1
position: 289943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 692-like
translation: MEDEAIQAANSEMGNLRSRRAFGAGQPLGPGNLWGRATFGAGQPLGLENLQVHHAASSFRRYSSQGCVLSPGPSTPEPSLLHADALQRLVALSHGHGQECGFVPDVKPPASGSPAQLVWECVAGHSFSWGVPTVADGQQPWGVTEEDSGHSSPPVPGRRRSLRRAGLAAETKVDESSPKKDGAEPEVAAWSPAGDGNQREEAGESSVAAPRGQTETVTTGLDHESTPVLEEKPEQGSASQEEEEEEEDEDLAEEDDLAYADDLRDENYHPSLDSDSELQRRQSQPKSHKKPVKEEQSLSEPSPTDSSPAEERGGRVSCKRRTRSCDEDVAQIGPKRIRKAAKREILLCDFEGCGKIFSNRQYLNHHKKYQHVHQKTFTCSEPSCGKSFNFKKHLKEHEKLHSDKRDYICEFCARSFRTSSNLIIHRRIHTGEKPLQCEICGFTCRQKASLNWHMKKHDADSFYQFSCDICGKKFEKRDNVTAHKSKSHPEAPSGPPQAVPSSPPSLLGTGMGHAELPGGDGGGEAGKSEGHPPPIAALAE
SIO_010081: LOC118175177
subclass of: SO_0000673
so part of: LOC118175177
location: complement(join(289628..289943,290329..290428,291383..291497,291941..292019,292249..292311,294844..294972,295394..295540,295753..295801,296329..296739,297162..297333,331296..331337))
location: region:289628-331337:-1
so has part: feature:331296-331337:-1:exon
so has part: feature:297162-297333:-1:exon
so has part: feature:296329-296739:-1:exon
so has part: feature:295753-295801:-1:exon
so has part: feature:295394-295540:-1:exon
so has part: feature:294844-294972:-1:exon
so has part: feature:292249-292311:-1:exon
so has part: feature:291941-292019:-1:exon
so has part: feature:291383-291497:-1:exon
so has part: feature:290329-290428:-1:exon
so has part: feature:289628-289943:-1:exon

XP_035197038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331296-331337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297162-297333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296329-296739:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295753-295801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:295394-295540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:294844-294972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292249-292311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291941-292019:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291383-291497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290329-290428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:289628-289943:-1:exon

LOC118175184
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 333830..335998
location: region:333830-335998:1
so has part: feature:333830-335998:1:exon
subclass of: SO_0000010

118175184
type: Gene
SIO_000068: ncbigene

position:333830:1
position: 333830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335998:1
position: 335998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333830-335998:1:exon

LOC118175184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175184
product: C-type lectin domain family 2 member B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_035341158.1
SIO_010081: LOC118175184
subclass of: SO_0000673
so part of: LOC118175184
location: join(333830..334148,334834..335015,335426..335529,335828..335998)
location: region:333830-335998:1
so has part: feature:333830-334148:1:exon
so has part: feature:334834-335015:1:exon
so has part: feature:335426-335529:1:exon
so has part: feature:335828-335998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333830-334148:1:exon

position:334148:1
position: 334148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334834-335015:1:exon

position:334834:1
position: 334834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335015:1
position: 335015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:335426-335529:1:exon

position:335426:1
position: 335426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335529:1
position: 335529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335828-335998:1:exon

position:335828:1
position: 335828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175184
product: C-type lectin domain family 2 member B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_035341157.1
SIO_010081: LOC118175184
subclass of: SO_0000673
so part of: LOC118175184
location: join(333832..334148,334404..334514,334834..335015,335426..335529,335828..335998)
location: region:333832-335998:1
so has part: feature:333832-334148:1:exon
so has part: feature:334404-334514:1:exon
so has part: feature:334834-335015:1:exon
so has part: feature:335426-335529:1:exon
so has part: feature:335828-335998:1:exon

position:333832:1
position: 333832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333832-334148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334404-334514:1:exon

position:334404:1
position: 334404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334514:1
position: 334514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334834-335015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335426-335529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335828-335998:1:exon

LOC118175184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like isoform X1
translation: MGKGAQEKTHPNQEEVLTPPRDEEKKCEWDSSPHGMKRKCRRVQKLLTPLCVVLSLLVFSLLVALIVVQLRSHSSHPQFSHVCPATWIGFQGKCYHFSKNETNWKTSSEKCKALEASLTSIDSQEELDFIMRYKGQANYWFGLHEEGNGQWRWTNGTAFNNWFVVRGGGPCAYLNQDKISSALCNTEKYWICSRPNNYVLWKKKIYPE
SIO_010081: LOC118175184
subclass of: SO_0000673
so part of: LOC118175184
location: join(334061..334148,334404..334514,334834..335015,335426..335529,335828..335969)
location: region:334061-335969:1
so has part: feature:334061-334148:1:exon
so has part: feature:334404-334514:1:exon
so has part: feature:334834-335015:1:exon
so has part: feature:335426-335529:1:exon
so has part: feature:335828-335969:1:exon

XP_035197048.1
type: Protein
SIO_000068: ncbiprotein

position:334061:1
position: 334061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335969:1
position: 335969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334061-334148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334404-334514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334834-335015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335426-335529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335828-335969:1:exon

LOC118175184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member B-like isoform X2
translation: MGKGAQEKTHPNQEEVLTPPRDEEKKCEWVVQLRSHSSHPQFSHVCPATWIGFQGKCYHFSKNETNWKTSSEKCKALEASLTSIDSQEELDFIMRYKGQANYWFGLHEEGNGQWRWTNGTAFNNWFVVRGGGPCAYLNQDKISSALCNTEKYWICSRPNNYVLWKKKIYPE
SIO_010081: LOC118175184
subclass of: SO_0000673
so part of: LOC118175184
location: join(334061..334148,334834..335015,335426..335529,335828..335969)
location: region:334061-335969:1
so has part: feature:334061-334148:1:exon
so has part: feature:334834-335015:1:exon
so has part: feature:335426-335529:1:exon
so has part: feature:335828-335969:1:exon

XP_035197049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334061-334148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334834-335015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335426-335529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335828-335969:1:exon

LOC118175182
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(337450..340785)
location: region:337450-340785:-1
so has part: feature:337450-340785:-1:exon
subclass of: SO_0000010

118175182
type: Gene
SIO_000068: ncbigene

position:337450:-1
position: 337450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340785:-1
position: 340785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337450-340785:-1:exon

LOC118175182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175182
product: killer cell lectin-like receptor subfamily B member 1B allele B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035341152.1
SIO_010081: LOC118175182
subclass of: SO_0000673
so part of: LOC118175182
location: complement(join(337450..337796,338183..338303,338723..338881,339102..339226,339618..339716,340633..340785))
location: region:337450-340785:-1
so has part: feature:340633-340785:-1:exon
so has part: feature:339618-339716:-1:exon
so has part: feature:339102-339226:-1:exon
so has part: feature:338723-338881:-1:exon
so has part: feature:338183-338303:-1:exon
so has part: feature:337450-337796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340633-340785:-1:exon

position:340633:-1
position: 340633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339618-339716:-1:exon

position:339618:-1
position: 339618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339716:-1
position: 339716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:339102-339226:-1:exon

position:339102:-1
position: 339102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339226:-1
position: 339226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:338723-338881:-1:exon

position:338723:-1
position: 338723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338881:-1
position: 338881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:338183-338303:-1:exon

position:338183:-1
position: 338183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338303:-1
position: 338303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337450-337796:-1:exon

position:337796:-1
position: 337796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily B member 1B allele B
translation: MAGEIIYADLRQPEGVSLPAERCQTPAVCPRWHGVFLKLSGLGYLVLLVLVVVLSVQVFQKAPTPPSAPQNKSEAEGRNTMEEYVSPSLLRYVCCWNGSAGHGGCKLCPQSWQLSGDHCYQVSRATGTWSQGKEDCERRGSHLAVLRNKADVERLNEGIQQEYKEKLTVWIGLKASKNTWKWVDNSSYKAAVFSPLQSVENGCATFKDKRLEVDGCESDHNWVCQKAPFPLISKTAGELCGARPEKSPAHRKLAANIWGEANPPRYGPVRNFRV
SIO_010081: LOC118175182
subclass of: SO_0000673
so part of: LOC118175182
location: complement(join(337549..337796,338183..338303,338723..338881,339102..339226,339618..339716,340633..340705))
location: region:337549-340705:-1
so has part: feature:340633-340705:-1:exon
so has part: feature:339618-339716:-1:exon
so has part: feature:339102-339226:-1:exon
so has part: feature:338723-338881:-1:exon
so has part: feature:338183-338303:-1:exon
so has part: feature:337549-337796:-1:exon

XP_035197043.1
type: Protein
SIO_000068: ncbiprotein

position:337549:-1
position: 337549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340705:-1
position: 340705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340633-340705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339618-339716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339102-339226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:338723-338881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338183-338303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337549-337796:-1:exon

LOC118175183
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344395..348197
location: region:344395-348197:1
so has part: feature:344395-348197:1:exon
subclass of: SO_0000010

118175183
type: Gene
SIO_000068: ncbigene

position:344395:1
position: 344395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348197:1
position: 348197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344395-348197:1:exon

LOC118175183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175183
product: C-type lectin domain family 2 member D-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341155.1
SIO_010081: LOC118175183
subclass of: SO_0000673
so part of: LOC118175183
location: join(344395..344399,345122..345213,346365..346463,346981..347153,347563..347669,347973..348197)
location: region:344395-348197:1
so has part: feature:344395-344399:1:exon
so has part: feature:345122-345213:1:exon
so has part: feature:346365-346463:1:exon
so has part: feature:346981-347153:1:exon
so has part: feature:347563-347669:1:exon
so has part: feature:347973-348197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344395-344399:1:exon

position:344399:1
position: 344399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345122-345213:1:exon

position:345122:1
position: 345122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345213:1
position: 345213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346365-346463:1:exon

position:346365:1
position: 346365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346463:1
position: 346463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346981-347153:1:exon

position:346981:1
position: 346981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347153:1
position: 347153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:347563-347669:1:exon

position:347563:1
position: 347563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347669:1
position: 347669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:347973-348197:1:exon

position:347973:1
position: 347973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175183
product: C-type lectin domain family 2 member D-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341154.1
SIO_010081: LOC118175183
subclass of: SO_0000673
so part of: LOC118175183
location: join(345091..345213,346365..346463,346981..347153,347563..347669,347973..348197)
location: region:345091-348197:1
so has part: feature:345091-345213:1:exon
so has part: feature:346365-346463:1:exon
so has part: feature:346981-347153:1:exon
so has part: feature:347563-347669:1:exon
so has part: feature:347973-348197:1:exon

position:345091:1
position: 345091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345091-345213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346365-346463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346981-347153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347563-347669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347973-348197:1:exon

LOC118175183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175183
product: C-type lectin domain family 2 member D-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035341156.1
SIO_010081: LOC118175183
subclass of: SO_0000673
so part of: LOC118175183
location: join(345091..345213,346365..346463,346981..347242,347276..347552)
location: region:345091-347552:1
so has part: feature:345091-345213:1:exon
so has part: feature:346365-346463:1:exon
so has part: feature:346981-347242:1:exon
so has part: feature:347276-347552:1:exon

position:347552:1
position: 347552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345091-345213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346365-346463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346981-347242:1:exon

position:347242:1
position: 347242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:347276-347552:1:exon

position:347276:1
position: 347276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member D-like isoform X1
translation: MGEIFWFCRCPIATPPASPGMKETREYPGFLGTERSKRGGSSLEMKPGARVACQVTTAVVFLVLLVTAIAFAVHAFQPRPQPCPRCPFDWIGYRGKCYYFSEAERNWTSSQDNCSALGASLAMFDSVEDLSFTMRYKGISEHWVGLSRDGEEQPWKWVNHSRPSRLFEIGGGGFCAYLGDTGLRSSQCNTERNWVCTKSALQSPGKGNKTRRAQNLCISS
SIO_010081: LOC118175183
subclass of: SO_0000673
so part of: LOC118175183
location: join(345096..345213,346365..346463,346981..347153,347563..347669,347973..348138)
location: region:345096-348138:1
so has part: feature:345096-345213:1:exon
so has part: feature:346365-346463:1:exon
so has part: feature:346981-347153:1:exon
so has part: feature:347563-347669:1:exon
so has part: feature:347973-348138:1:exon

XP_035197045.1
type: Protein
SIO_000068: ncbiprotein

position:345096:1
position: 345096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348138:1
position: 348138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345096-345213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346365-346463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346981-347153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347563-347669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347973-348138:1:exon

LOC118175183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member L-like isoform X3
translation: MGEIFWFCRCPIATPPASPGMKETREYPGFLGTERSKRGGSSLEMKPGARVACQVTTAVVFLVLLVTAIAFAVHAFQPRPQPCPRCPFDWIGYRGKCYYFSEAERNWTSSQDNCSALGASLAMFDSVEDLVWKPPEKRPRLLPPFGFFDCSLSIFFLALGLLLKLLTKANQCKTCSKKGKNRKRKKKKKEQNLDN
SIO_010081: LOC118175183
subclass of: SO_0000673
so part of: LOC118175183
location: join(345096..345213,346365..346463,346981..347242,347276..347384)
location: region:345096-347384:1
so has part: feature:345096-345213:1:exon
so has part: feature:346365-346463:1:exon
so has part: feature:346981-347242:1:exon
so has part: feature:347276-347384:1:exon

XP_035197047.1
type: Protein
SIO_000068: ncbiprotein

position:347384:1
position: 347384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345096-345213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346365-346463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346981-347242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347276-347384:1:exon

LOC118175183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member D-like isoform X2
translation: MKETREYPGFLGTERSKRGGSSLEMKPGARVACQVTTAVVFLVLLVTAIAFAVHAFQPRPQPCPRCPFDWIGYRGKCYYFSEAERNWTSSQDNCSALGASLAMFDSVEDLSFTMRYKGISEHWVGLSRDGEEQPWKWVNHSRPSRLFEIGGGGFCAYLGDTGLRSSQCNTERNWVCTKSALQSPGKGNKTRRAQNLCISS
SIO_010081: LOC118175183
subclass of: SO_0000673
so part of: LOC118175183
location: join(345156..345213,346365..346463,346981..347153,347563..347669,347973..348138)
location: region:345156-348138:1
so has part: feature:345156-345213:1:exon
so has part: feature:346365-346463:1:exon
so has part: feature:346981-347153:1:exon
so has part: feature:347563-347669:1:exon
so has part: feature:347973-348138:1:exon

XP_035197046.1
type: Protein
SIO_000068: ncbiprotein

position:345156:1
position: 345156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345156-345213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346365-346463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346981-347153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347563-347669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347973-348138:1:exon

LOC118175186
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(349857..353544)
location: region:349857-353544:-1
so has part: feature:349857-353544:-1:exon
subclass of: SO_0000010

118175186
type: Gene
SIO_000068: ncbigene

position:349857:-1
position: 349857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353544:-1
position: 353544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349857-353544:-1:exon

LOC118175186
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175186
product: C-type lectin domain family 2 member D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035341160.1
SIO_010081: LOC118175186
subclass of: SO_0000673
so part of: LOC118175186
location: complement(join(349857..350923,351013..351122,351222..351379,351547..351654,353353..353544))
location: region:349857-353544:-1
so has part: feature:353353-353544:-1:exon
so has part: feature:351547-351654:-1:exon
so has part: feature:351222-351379:-1:exon
so has part: feature:351013-351122:-1:exon
so has part: feature:349857-350923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353353-353544:-1:exon

position:353353:-1
position: 353353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351547-351654:-1:exon

position:351547:-1
position: 351547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351654:-1
position: 351654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:351222-351379:-1:exon

position:351222:-1
position: 351222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351379:-1
position: 351379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:351013-351122:-1:exon

position:351013:-1
position: 351013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351122:-1
position: 351122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:349857-350923:-1:exon

position:350923:-1
position: 350923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175186
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 2 member D-like
translation: MAVTLSMDENKNEDNDSVLENLFPVRWKDRRPMSWKRYLFYAAIILAALLLIAIIIWLALCAYSCPHLWIGFNRKCFYFSEVEKNWTSSRDDCRARGASLAVIQSKEELDFVLRYKGFPDHWIGLSRQTPSQGWEWDDGTKFDSSLFPIGGGEDFAFLNDRKVTSARSSGERHWICTKPQSRQR
SIO_010081: LOC118175186
subclass of: SO_0000673
so part of: LOC118175186
location: complement(join(350806..350923,351013..351122,351222..351379,351547..351654,353353..353413))
location: region:350806-353413:-1
so has part: feature:353353-353413:-1:exon
so has part: feature:351547-351654:-1:exon
so has part: feature:351222-351379:-1:exon
so has part: feature:351013-351122:-1:exon
so has part: feature:350806-350923:-1:exon

XP_035197051.1
type: Protein
SIO_000068: ncbiprotein

position:350806:-1
position: 350806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353413:-1
position: 353413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353353-353413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351547-351654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351222-351379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351013-351122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350806-350923:-1:exon

LOC118175185
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(355780..358443)
location: region:355780-358443:-1
so has part: feature:355780-358443:-1:exon
subclass of: SO_0000010

118175185
type: Gene
SIO_000068: ncbigene

position:355780:-1
position: 355780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358443:-1
position: 358443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355780-358443:-1:exon

LOC118175185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175185
product: E3 ubiquitin-protein ligase TRIM7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_035341159.1
SIO_010081: LOC118175185
subclass of: SO_0000673
so part of: LOC118175185
location: complement(join(355780..356833,357381..357475,358114..358443))
location: region:355780-358443:-1
so has part: feature:358114-358443:-1:exon
so has part: feature:357381-357475:-1:exon
so has part: feature:355780-356833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358114-358443:-1:exon

position:358114:-1
position: 358114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357381-357475:-1:exon

position:357381:-1
position: 357381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357475:-1
position: 357475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:355780-356833:-1:exon

position:356833:-1
position: 356833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118175185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like
translation: MAFFLKPRPCTWDLAVDYNAAKQFQVDVTLDPTTAGPEVILSEDLKEATWGRPGHRWPAGPGRFDTDPCMLANQGFTSGRHYWEVKASGRFWTVGVARESVRRNGRILFKPNAEIWGLQKYDELCVALTAPSNTSVPLHGGEIGVYLDYEVGQVSFYALGTRRRVFTFRVASFSGERVFPYFCVLLSTIKLPPRG
SIO_010081: LOC118175185
subclass of: SO_0000673
so part of: LOC118175185
location: complement(join(356322..356833,357381..357456))
location: region:356322-357456:-1
so has part: feature:357381-357456:-1:exon
so has part: feature:356322-356833:-1:exon

XP_035197050.1
type: Protein
SIO_000068: ncbiprotein

position:356322:-1
position: 356322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357456:-1
position: 357456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357381-357456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356322-356833:-1:exon

LOC118175178
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 358631..361085
location: region:358631-361085:1
so has part: feature:358631-361085:1:exon
subclass of: SO_0000010

118175178
type: Gene
SIO_000068: ncbigene

position:358631:1
position: 358631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361085:1
position: 361085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358631-361085:1:exon

LOC118175178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175178
product: E3 ubiquitin-protein ligase TRIM7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341148.1
SIO_010081: LOC118175178
subclass of: SO_0000673
so part of: LOC118175178
location: join(358631..358661,358705..358959,359209..359306,359905..360117,360206..360228,360448..360551,360635..360694,360785..361085)
location: region:358631-361085:1
so has part: feature:358631-358661:1:exon
so has part: feature:358705-358959:1:exon
so has part: feature:359209-359306:1:exon
so has part: feature:359905-360117:1:exon
so has part: feature:360206-360228:1:exon
so has part: feature:360448-360551:1:exon
so has part: feature:360635-360694:1:exon
so has part: feature:360785-361085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358631-358661:1:exon

position:358661:1
position: 358661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358705-358959:1:exon

position:358705:1
position: 358705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358959:1
position: 358959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359209-359306:1:exon

position:359209:1
position: 359209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359306:1
position: 359306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:359905-360117:1:exon

position:359905:1
position: 359905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360117:1
position: 360117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:360206-360228:1:exon

position:360206:1
position: 360206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360228:1
position: 360228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:360448-360551:1:exon

position:360448:1
position: 360448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360551:1
position: 360551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:360635-360694:1:exon

position:360635:1
position: 360635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360694:1
position: 360694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:360785-361085:1:exon

position:360785:1
position: 360785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like
translation: MPNAAFPTREGGRLRPAPLQSFQGLKHGSGEKAPRPGRSLAAFPRRRLLALKKKKTHGVKILRVEAVGGHGRAAAGSGHEAVWEARGGGGEAEQREEKIQSHLQSLRKVLAEFLDWRVADEKRRLDYLETSEAERRRIGSEFERLRRVLDEKERAVLQRLAELDAAFEAAQAEKASRVAEEIARLHGLIGQLEAGRLPQDTGSGLSSWNEARLQLPPELEKSLRSCRRQHAALEEALKELRDPGRPKPKLGTGKILSTEEKAKGTPEPGSAPPQVLADRKSVRWDEEQDRAREPRRCEEEAPGALGCEGAAPRRCSWEVEDKAQISGL
SIO_010081: LOC118175178
subclass of: SO_0000673
so part of: LOC118175178
location: join(358631..358661,358705..358959,359209..359306,359905..360117,360206..360228,360448..360551,360635..360694,360785..360987)
location: region:358631-360987:1
so has part: feature:358631-358661:1:exon
so has part: feature:358705-358959:1:exon
so has part: feature:359209-359306:1:exon
so has part: feature:359905-360117:1:exon
so has part: feature:360206-360228:1:exon
so has part: feature:360448-360551:1:exon
so has part: feature:360635-360694:1:exon
so has part: feature:360785-360987:1:exon

XP_035197039.1
type: Protein
SIO_000068: ncbiprotein

position:360987:1
position: 360987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358631-358661:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358705-358959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359209-359306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359905-360117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360206-360228:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360448-360551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360635-360694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360785-360987:1:exon

LOC118175179
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(361537..362076)
location: region:361537-362076:-1
so has part: feature:361537-362076:-1:exon
subclass of: SO_0000010

118175179
type: Gene
SIO_000068: ncbigene

position:361537:-1
position: 361537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362076:-1
position: 362076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361537-362076:-1:exon

LOC118175179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175179
product: histone H1B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_035341149.1
SIO_010081: LOC118175179
subclass of: SO_0000673
so part of: LOC118175179
location: complement(361537..362076)
location: region:361537-362076:-1
so has part: feature:361537-362076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361537-362076:-1:exon

LOC118175179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1B-like
translation: MPRGNALSHPSTSGAGLAVQLPKKRGRPSLSDLILRAVCVSTARKGASLALIKKTLTTEGYDVVRNSGRLKAALAALVTKGLLQRVTGTGIAGSFRIGRVGKERMEGAARRGRAAGETHQRPAGKTKGPRRAVKANPQRLKKPRRPRGKAAVAPAEPAAEDPEAAERPTTAAAAAEEER
SIO_010081: LOC118175179
subclass of: SO_0000673
so part of: LOC118175179
location: complement(361537..362076)
location: region:361537-362076:-1
so has part: feature:361537-362076:-1:exon

XP_035197040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361537-362076:-1:exon

LOC118175180
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 363916..365388
location: region:363916-365388:1
so has part: feature:363916-365388:1:exon
subclass of: SO_0000010

118175180
type: Gene
SIO_000068: ncbigene

position:363916:1
position: 363916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365388:1
position: 365388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363916-365388:1:exon

LOC118175180
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175180
product: E3 ubiquitin-protein ligase TRIM58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341150.1
SIO_010081: LOC118175180
subclass of: SO_0000673
so part of: LOC118175180
location: join(363916..364436,364863..364988,365072..365160,365289..365388)
location: region:363916-365388:1
so has part: feature:363916-364436:1:exon
so has part: feature:364863-364988:1:exon
so has part: feature:365072-365160:1:exon
so has part: feature:365289-365388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363916-364436:1:exon

position:364436:1
position: 364436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364863-364988:1:exon

position:364863:1
position: 364863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364988:1
position: 364988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365072-365160:1:exon

position:365072:1
position: 365072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365160:1
position: 365160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:365289-365388:1:exon

position:365289:1
position: 365289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like
translation: MAEGNALGKLREEATCAVCLDFFRRPVMLLACGHNFCRACLARCTEKAAGAGSCPQCRLPFPPGSFFCPNRQLANVVAVVRELAAEEQELGCRDGSRARGAFVGHRCHPSAPLEDRQEPTLSSSTPPEPLGPPQKTPREDERAATLPTPPGGAQQALLARVDAERQKLLAVLGGLRGLMGQQEEAEGWTPASPPAGTGGVSVRWAKKTSPSTALRRHFWA
SIO_010081: LOC118175180
subclass of: SO_0000673
so part of: LOC118175180
location: join(364089..364436,364863..364988,365072..365160,365289..365388)
location: region:364089-365388:1
so has part: feature:364089-364436:1:exon
so has part: feature:364863-364988:1:exon
so has part: feature:365072-365160:1:exon
so has part: feature:365289-365388:1:exon

XP_035197041.1
type: Protein
SIO_000068: ncbiprotein

position:364089:1
position: 364089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364089-364436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364863-364988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365072-365160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365289-365388:1:exon

LOC118175187
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118175187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <366107..368016
location: region:366107-368016:1
so has part: feature:366107-368016:1:exon
subclass of: SO_0000010

118175187
type: Gene
SIO_000068: ncbigene

position:366107:1
position: 366107
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:368016:1
position: 368016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366107-368016:1:exon

LOC118175187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118175187
product: butyrophilin subfamily 1 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_035341161.1
SIO_010081: LOC118175187
subclass of: SO_0000673
so part of: LOC118175187
location: join(<366107..366203,366483..366530,367484..368016)
location: region:366107-368016:1
so has part: feature:366107-366203:1:exon
so has part: feature:366483-366530:1:exon
so has part: feature:367484-368016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366107-366203:1:exon

position:366203:1
position: 366203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366483-366530:1:exon

position:366483:1
position: 366483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366530:1
position: 366530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367484-368016:1:exon

position:367484:1
position: 367484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118175187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118175187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like
translation: PKTRSPERRLEAELEAFSRTNNALAAAVERLRGVLACSPEEDLGGYQKASVTLDPATAHPQILVSPDGRSARRRKTPREPPPRSSERFEALRCVLGRQGFTGGRHRWAVEVLPGPDWALGVAREFVPRKGCFGLSPARGVWAVGQWLGQLRALTWPSPTSLPLARVPKRIEVALDYGGGRVAFRDADSEAEIFAFPPAAFAGERLRPLLWLGEGPALLTFCP
SIO_010081: LOC118175187
subclass of: SO_0000673
so part of: LOC118175187
location: join(<366107..366203,366483..366530,367484..368007)
location: region:366107-368007:1
so has part: feature:366107-366203:1:exon
so has part: feature:366483-366530:1:exon
so has part: feature:367484-368007:1:exon

XP_035197052.1
type: Protein
SIO_000068: ncbiprotein

position:368007:1
position: 368007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366107-366203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366483-366530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367484-368007:1:exon

MGAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: MGAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(372833..374279)
location: region:372833-374279:-1
so has part: feature:372833-374279:-1:exon
subclass of: SO_0000010

118175181
type: Gene
SIO_000068: ncbigene

position:372833:-1
position: 372833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374279:-1
position: 374279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372833-374279:-1:exon

MGAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: MGAT1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035341151.1
SIO_010081: MGAT1
subclass of: SO_0000673
so part of: MGAT1
location: complement(372833..374279)
location: region:372833-374279:-1
so has part: feature:372833-374279:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372833-374279:-1:exon

MGAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: MGAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MLKKSSLVLWGAALFVAWNGLLLLFLWSRPPSSSSSSSSSAERGRLTEEVIRLAQDAEAELERQKELLRQIHRYSGLWGRRRRPPTAPPAPSPAPPVPDASTVLPVLVMACDRSTVRRCLDKLLRYRPSAQRFPVIVSQDCGHAETARVIASYGDAVAHIRQPELGDVPVPAEHRKFQGYYKIARHYRWALGQIFRTFRYRAAIVVEDDLEVAPDFFEYFQAAFPLLLADRSLWCVSAWNDNGKEQMVDAGQAELLYRTDFFPGLGWLLLAELWDELEPKWPRAFWDDWMRQPEQRRGRSCIRPEVSRTMTFGRKGVSHGQFFDQYLKFIKLNDRFVPFTRLDLSYLKKEEYERSFLPRVYAAPEVRVEELQGNQRRELGAVRVQYTGRDSFKAFAKALGLMDDLKSGVPRAGYRGIVSFVYRGRRVYLAPPSDWTGYDPSWS
SIO_010081: MGAT1
subclass of: SO_0000673
so part of: MGAT1
location: complement(372928..374259)
location: region:372928-374259:-1
so has part: feature:372928-374259:-1:exon

XP_035197042.1
type: Protein
SIO_000068: ncbiprotein

position:372928:-1
position: 372928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374259:-1
position: 374259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372928-374259:-1:exon