Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 11, BPBGC_Ojam_1.0, whole genome shotgun sequence.
type: Entry
definition: Oxyura jamaicensis isolate SHBP4307 breed ruddy duck chromosome 11, BPBGC_Ojam_1.0, whole genome shotgun sequence.
sequence version: NC_048903.1
sequence date: 2020-07-05
sequence: sequence
division: CON
label: NC_048903.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA641662
dblink: SAMN13257492
keyword: WGS
keyword: RefSeq
source: Oxyura jamaicensis (ruddy duck)
organism: Oxyura jamaicensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021809.1.\nAssembly name: BPBGC_Ojam_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2020/03/10. The original whole-genome shotgun project\nhas the accession JAACYN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Date :: 01-SEP-2019\nAssembly Method :: Supernova 2 v. SEPT-2019\nAssembly Name :: BPBGC_Ojam_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Oxyura jamaicensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21293394
topology: linear
so has quality: SO_0000987
location: 1..21293394
location: region:1-21293394:1
RO_0002162: 8884

NC_048903
type: RefSeq
SIO_000068: refseq

PRJNA641662
type: BioProject
SIO_000068: bioproject

SAMN13257492
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21293394:1
position: 21293394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21293394:1:source
so part of: sequence
organism: Oxyura jamaicensis
mol type: genomic DNA
isolate: SHBP4307
chromosome: 11
sex: female
tissue type: blood
dev stage: adult
country: USA: Scotland Neck, NC
breed: ruddy duck

8884
type: Taxonomy
SIO_000068: taxonomy

CCDC113
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CCDC113
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2866..10106
location: region:2866-10106:1
so has part: feature:2866-10106:1:exon
subclass of: SO_0000010

118172668
type: Gene
SIO_000068: ncbigene

position:2866:1
position: 2866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10106:1
position: 10106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2866-10106:1:exon

CCDC113
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CCDC113
product: coiled-coil domain containing 113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035336735.1
SIO_010081: CCDC113
subclass of: SO_0000673
so part of: CCDC113
location: join(2866..2930,3346..3478,4640..4801,5913..6068,6564..6644,6797..6952,7860..7967,8493..8648,9962..10106)
location: region:2866-10106:1
so has part: feature:2866-2930:1:exon
so has part: feature:3346-3478:1:exon
so has part: feature:4640-4801:1:exon
so has part: feature:5913-6068:1:exon
so has part: feature:6564-6644:1:exon
so has part: feature:6797-6952:1:exon
so has part: feature:7860-7967:1:exon
so has part: feature:8493-8648:1:exon
so has part: feature:9962-10106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2866-2930:1:exon

position:2930:1
position: 2930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3346-3478:1:exon

position:3346:1
position: 3346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3478:1
position: 3478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4640-4801:1:exon

position:4640:1
position: 4640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4801:1
position: 4801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5913-6068:1:exon

position:5913:1
position: 5913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6068:1
position: 6068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6564-6644:1:exon

position:6564:1
position: 6564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6644:1
position: 6644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6797-6952:1:exon

position:6797:1
position: 6797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6952:1
position: 6952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7860-7967:1:exon

position:7860:1
position: 7860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7967:1
position: 7967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8493-8648:1:exon

position:8493:1
position: 8493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8648:1
position: 8648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9962-10106:1:exon

position:9962:1
position: 9962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC113
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CCDC113
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 113
translation: MAEQVLAVLPLPQLRARLQEERHANALLRAEVEMFENQYRKMEPSSPALRQQPVAHDAPPELAHILTHGRSKSKMRRSTGYFVGLTVEQKCELAERELADMKGEIQRMEEDAEKTLQDLEAVIQETDIWWIDVKKAISDFEKDIASTISNKKGSIIASEKLLRYLEEKNHQRDLMKEKLRLENSFLKCYKKKLQQQLRQKEWMGETLREVRSQQLQVTKEQYKEKIDEKNKELQQLKLTLGKTVQILNFCKKKLHNTMETSTSLMKDISQRKELLEKIGRESTLVEEQRAEAESLDRWLQKQLSDYSTPPVMSYVQTAMDVTDLEKSIKAWQRRAAIAEMTLQSYRRAWNQVKMSGNQQLAEGAAPFF
SIO_010081: CCDC113
subclass of: SO_0000673
so part of: CCDC113
location: join(2866..2930,3346..3478,4640..4801,5913..6068,6564..6644,6797..6952,7860..7967,8493..8648,9962..10051)
location: region:2866-10051:1
so has part: feature:2866-2930:1:exon
so has part: feature:3346-3478:1:exon
so has part: feature:4640-4801:1:exon
so has part: feature:5913-6068:1:exon
so has part: feature:6564-6644:1:exon
so has part: feature:6797-6952:1:exon
so has part: feature:7860-7967:1:exon
so has part: feature:8493-8648:1:exon
so has part: feature:9962-10051:1:exon

XP_035192626.1
type: Protein
SIO_000068: ncbiprotein

position:10051:1
position: 10051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2866-2930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3346-3478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4640-4801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5913-6068:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6564-6644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6797-6952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7860-7967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8493-8648:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9962-10051:1:exon

GINS3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: GINS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41260..45386
location: region:41260-45386:1
so has part: feature:41260-45386:1:exon
subclass of: SO_0000010

118172847
type: Gene
SIO_000068: ncbigene

position:41260:1
position: 41260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45386:1
position: 45386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41260-45386:1:exon

GINS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GINS3
product: GINS complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035337037.1
SIO_010081: GINS3
subclass of: SO_0000673
so part of: GINS3
location: join(41260..41501,41695..41928,44816..45386)
location: region:41260-45386:1
so has part: feature:41260-41501:1:exon
so has part: feature:41695-41928:1:exon
so has part: feature:44816-45386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41260-41501:1:exon

position:41501:1
position: 41501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41695-41928:1:exon

position:41695:1
position: 41695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41928:1
position: 41928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44816-45386:1:exon

position:44816:1
position: 44816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GINS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GINS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein PSF3
translation: MSEAYFPVGPGLGLEENFLSLDDILMSQEKLPGRAESSLPRLAFALGQGAAGGSGDSIPEGSKLEIPMWLAKGLHDSKRRIISVELPKIYKEAWRTVFSADANVVDLHKMGPYYYGFGSQLLNFDNPENPEIAQTILQTFISRFRRIMDSSQNAYNEDTSMLVARLDELERALFRAGQKGLNDFQCWEKGQASQITVSSLVQNYGKRKFTDMDG
SIO_010081: GINS3
subclass of: SO_0000673
so part of: GINS3
location: join(41322..41501,41695..41928,44816..45046)
location: region:41322-45046:1
so has part: feature:41322-41501:1:exon
so has part: feature:41695-41928:1:exon
so has part: feature:44816-45046:1:exon

XP_035192928.1
type: Protein
SIO_000068: ncbiprotein

position:41322:1
position: 41322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45046:1
position: 45046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41322-41501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41695-41928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44816-45046:1:exon

NDRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: NDRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 60866..81975
location: region:60866-81975:1
so has part: feature:60866-81975:1:exon
subclass of: SO_0000010

118172836
type: Gene
SIO_000068: ncbigene

position:60866:1
position: 60866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81975:1
position: 81975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60866-81975:1:exon

NDRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NDRG4
product: NDRG family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_035337019.1
SIO_010081: NDRG4
subclass of: SO_0000673
so part of: NDRG4
location: join(60866..60933,64892..64983,65464..65508,73987..74092,74900..75020,75223..75285,75476..75536,75881..75967,76090..76146,76518..76621,76742..76798,76886..76937,77655..77702,77944..77979,78174..78225,78766..78804,79524..81975)
location: region:60866-81975:1
so has part: feature:60866-60933:1:exon
so has part: feature:64892-64983:1:exon
so has part: feature:65464-65508:1:exon
so has part: feature:73987-74092:1:exon
so has part: feature:74900-75020:1:exon
so has part: feature:75223-75285:1:exon
so has part: feature:75476-75536:1:exon
so has part: feature:75881-75967:1:exon
so has part: feature:76090-76146:1:exon
so has part: feature:76518-76621:1:exon
so has part: feature:76742-76798:1:exon
so has part: feature:76886-76937:1:exon
so has part: feature:77655-77702:1:exon
so has part: feature:77944-77979:1:exon
so has part: feature:78174-78225:1:exon
so has part: feature:78766-78804:1:exon
so has part: feature:79524-81975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60866-60933:1:exon

position:60933:1
position: 60933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64892-64983:1:exon

position:64892:1
position: 64892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64983:1
position: 64983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65464-65508:1:exon

position:65464:1
position: 65464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65508:1
position: 65508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73987-74092:1:exon

position:73987:1
position: 73987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74092:1
position: 74092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:74900-75020:1:exon

position:74900:1
position: 74900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75020:1
position: 75020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75223-75285:1:exon

position:75223:1
position: 75223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75285:1
position: 75285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:75476-75536:1:exon

position:75476:1
position: 75476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75536:1
position: 75536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75881-75967:1:exon

position:75881:1
position: 75881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75967:1
position: 75967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:76090-76146:1:exon

position:76090:1
position: 76090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76146:1
position: 76146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:76518-76621:1:exon

position:76518:1
position: 76518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76621:1
position: 76621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:76742-76798:1:exon

position:76742:1
position: 76742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76798:1
position: 76798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:76886-76937:1:exon

position:76886:1
position: 76886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76937:1
position: 76937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:77655-77702:1:exon

position:77655:1
position: 77655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77702:1
position: 77702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:77944-77979:1:exon

position:77944:1
position: 77944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77979:1
position: 77979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:78174-78225:1:exon

position:78174:1
position: 78174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78225:1
position: 78225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:78766-78804:1:exon

position:78766:1
position: 78766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78804:1
position: 78804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:79524-81975:1:exon

position:79524:1
position: 79524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NDRG4
product: NDRG family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_035337020.1
SIO_010081: NDRG4
subclass of: SO_0000673
so part of: NDRG4
location: join(60897..60933,64892..64983,65464..65508,73987..74092,74900..75020,75223..75285,75476..75536,75881..75967,76090..76146,76518..76621,76742..76798,76886..76937,77655..77702,77944..77979,78174..78225,79524..79678)
location: region:60897-79678:1
so has part: feature:60897-60933:1:exon
so has part: feature:64892-64983:1:exon
so has part: feature:65464-65508:1:exon
so has part: feature:73987-74092:1:exon
so has part: feature:74900-75020:1:exon
so has part: feature:75223-75285:1:exon
so has part: feature:75476-75536:1:exon
so has part: feature:75881-75967:1:exon
so has part: feature:76090-76146:1:exon
so has part: feature:76518-76621:1:exon
so has part: feature:76742-76798:1:exon
so has part: feature:76886-76937:1:exon
so has part: feature:77655-77702:1:exon
so has part: feature:77944-77979:1:exon
so has part: feature:78174-78225:1:exon
so has part: feature:79524-79678:1:exon

position:60897:1
position: 60897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79678:1
position: 79678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60897-60933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64892-64983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65464-65508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73987-74092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74900-75020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75223-75285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75476-75536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75881-75967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76090-76146:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76518-76621:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76742-76798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76886-76937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:77655-77702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77944-77979:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:78174-78225:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79524-79678:1:exon

NDRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NDRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG4 isoform X1
translation: MKVLRHKIELLTGLLLQEMTMAGLHELRFTEEKPLLRGQDPELENSDVFLSAVDTDWKEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNYEDMQEITKHFVVCHVDAPGQQAGASQFPQGYQYPSMDQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAAAKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGSVVNQFNLQLFLNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGVVECNSKLDPTNTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAHLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGARPRACTHSESTEAMGQINHTMEVSC
SIO_010081: NDRG4
subclass of: SO_0000673
so part of: NDRG4
location: join(60897..60933,64892..64983,65464..65508,73987..74092,74900..75020,75223..75285,75476..75536,75881..75967,76090..76146,76518..76621,76742..76798,76886..76937,77655..77702,77944..77979,78174..78225,78766..78804,79524..79678)
location: region:60897-79678:1
so has part: feature:60897-60933:1:exon
so has part: feature:64892-64983:1:exon
so has part: feature:65464-65508:1:exon
so has part: feature:73987-74092:1:exon
so has part: feature:74900-75020:1:exon
so has part: feature:75223-75285:1:exon
so has part: feature:75476-75536:1:exon
so has part: feature:75881-75967:1:exon
so has part: feature:76090-76146:1:exon
so has part: feature:76518-76621:1:exon
so has part: feature:76742-76798:1:exon
so has part: feature:76886-76937:1:exon
so has part: feature:77655-77702:1:exon
so has part: feature:77944-77979:1:exon
so has part: feature:78174-78225:1:exon
so has part: feature:78766-78804:1:exon
so has part: feature:79524-79678:1:exon

XP_035192910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60897-60933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64892-64983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65464-65508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73987-74092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74900-75020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75223-75285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75476-75536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75881-75967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76090-76146:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76518-76621:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76742-76798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76886-76937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:77655-77702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77944-77979:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:78174-78225:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:78766-78804:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79524-79678:1:exon

NDRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NDRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG4 isoform X2
translation: MKVLRHKIELLTGLLLQEMTMAGLHELRFTEEKPLLRGQDPELENSDVFLSAVDTDWKEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNYEDMQEITKHFVVCHVDAPGQQAGASQFPQGYQYPSMDQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAAAKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGSVVNQFNLQLFLNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGVVECNSKLDPTNTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGARPRACTHSESTEAMGQINHTMEVSC
SIO_010081: NDRG4
subclass of: SO_0000673
so part of: NDRG4
location: join(60897..60933,64892..64983,65464..65508,73987..74092,74900..75020,75223..75285,75476..75536,75881..75967,76090..76146,76518..76621,76742..76798,76886..76937,77655..77702,77944..77979,78174..78225,79524..79678)
location: region:60897-79678:1
so has part: feature:60897-60933:1:exon
so has part: feature:64892-64983:1:exon
so has part: feature:65464-65508:1:exon
so has part: feature:73987-74092:1:exon
so has part: feature:74900-75020:1:exon
so has part: feature:75223-75285:1:exon
so has part: feature:75476-75536:1:exon
so has part: feature:75881-75967:1:exon
so has part: feature:76090-76146:1:exon
so has part: feature:76518-76621:1:exon
so has part: feature:76742-76798:1:exon
so has part: feature:76886-76937:1:exon
so has part: feature:77655-77702:1:exon
so has part: feature:77944-77979:1:exon
so has part: feature:78174-78225:1:exon
so has part: feature:79524-79678:1:exon

XP_035192911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60897-60933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64892-64983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65464-65508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73987-74092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74900-75020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75223-75285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75476-75536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75881-75967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76090-76146:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76518-76621:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76742-76798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76886-76937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:77655-77702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77944-77979:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:78174-78225:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79524-79678:1:exon

NDRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NDRG4
product: NDRG family member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_035337021.1
SIO_010081: NDRG4
subclass of: SO_0000673
so part of: NDRG4
location: join(70644..70799,73987..74092,74900..75020,75223..75285,75476..75536,75881..75967,76090..76146,76518..76621,76742..76798,76886..76937,77655..77702,77944..77979,78174..78225,78766..78804,79524..81975)
location: region:70644-81975:1
so has part: feature:70644-70799:1:exon
so has part: feature:73987-74092:1:exon
so has part: feature:74900-75020:1:exon
so has part: feature:75223-75285:1:exon
so has part: feature:75476-75536:1:exon
so has part: feature:75881-75967:1:exon
so has part: feature:76090-76146:1:exon
so has part: feature:76518-76621:1:exon
so has part: feature:76742-76798:1:exon
so has part: feature:76886-76937:1:exon
so has part: feature:77655-77702:1:exon
so has part: feature:77944-77979:1:exon
so has part: feature:78174-78225:1:exon
so has part: feature:78766-78804:1:exon
so has part: feature:79524-81975:1:exon

position:70644:1
position: 70644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70644-70799:1:exon

position:70799:1
position: 70799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73987-74092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74900-75020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75223-75285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75476-75536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75881-75967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76090-76146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76518-76621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76742-76798:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76886-76937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77655-77702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77944-77979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:78174-78225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:78766-78804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:79524-81975:1:exon

NDRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NDRG4
product: NDRG family member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_035337022.1
SIO_010081: NDRG4
subclass of: SO_0000673
so part of: NDRG4
location: join(70644..70799,73987..74092,74900..75020,75223..75285,75476..75536,75881..75967,76090..76146,76518..76621,76742..76798,76886..76937,77655..77702,77944..77979,78174..78225,79524..81975)
location: region:70644-81975:1
so has part: feature:70644-70799:1:exon
so has part: feature:73987-74092:1:exon
so has part: feature:74900-75020:1:exon
so has part: feature:75223-75285:1:exon
so has part: feature:75476-75536:1:exon
so has part: feature:75881-75967:1:exon
so has part: feature:76090-76146:1:exon
so has part: feature:76518-76621:1:exon
so has part: feature:76742-76798:1:exon
so has part: feature:76886-76937:1:exon
so has part: feature:77655-77702:1:exon
so has part: feature:77944-77979:1:exon
so has part: feature:78174-78225:1:exon
so has part: feature:79524-81975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70644-70799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73987-74092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74900-75020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75223-75285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75476-75536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75881-75967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76090-76146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76518-76621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76742-76798:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76886-76937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77655-77702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77944-77979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:78174-78225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:79524-81975:1:exon

NDRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NDRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG4 isoform X3
translation: MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNYEDMQEITKHFVVCHVDAPGQQAGASQFPQGYQYPSMDQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAAAKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGSVVNQFNLQLFLNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGVVECNSKLDPTNTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAHLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGARPRACTHSESTEAMGQINHTMEVSC
SIO_010081: NDRG4
subclass of: SO_0000673
so part of: NDRG4
location: join(70779..70799,73987..74092,74900..75020,75223..75285,75476..75536,75881..75967,76090..76146,76518..76621,76742..76798,76886..76937,77655..77702,77944..77979,78174..78225,78766..78804,79524..79678)
location: region:70779-79678:1
so has part: feature:70779-70799:1:exon
so has part: feature:73987-74092:1:exon
so has part: feature:74900-75020:1:exon
so has part: feature:75223-75285:1:exon
so has part: feature:75476-75536:1:exon
so has part: feature:75881-75967:1:exon
so has part: feature:76090-76146:1:exon
so has part: feature:76518-76621:1:exon
so has part: feature:76742-76798:1:exon
so has part: feature:76886-76937:1:exon
so has part: feature:77655-77702:1:exon
so has part: feature:77944-77979:1:exon
so has part: feature:78174-78225:1:exon
so has part: feature:78766-78804:1:exon
so has part: feature:79524-79678:1:exon

XP_035192912.1
type: Protein
SIO_000068: ncbiprotein

position:70779:1
position: 70779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70779-70799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73987-74092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74900-75020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75223-75285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75476-75536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75881-75967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76090-76146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76518-76621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76742-76798:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76886-76937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77655-77702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77944-77979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:78174-78225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:78766-78804:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:79524-79678:1:exon

NDRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NDRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG4 isoform X4
translation: MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNYEDMQEITKHFVVCHVDAPGQQAGASQFPQGYQYPSMDQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAAAKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGSVVNQFNLQLFLNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGVVECNSKLDPTNTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGARPRACTHSESTEAMGQINHTMEVSC
SIO_010081: NDRG4
subclass of: SO_0000673
so part of: NDRG4
location: join(70779..70799,73987..74092,74900..75020,75223..75285,75476..75536,75881..75967,76090..76146,76518..76621,76742..76798,76886..76937,77655..77702,77944..77979,78174..78225,79524..79678)
location: region:70779-79678:1
so has part: feature:70779-70799:1:exon
so has part: feature:73987-74092:1:exon
so has part: feature:74900-75020:1:exon
so has part: feature:75223-75285:1:exon
so has part: feature:75476-75536:1:exon
so has part: feature:75881-75967:1:exon
so has part: feature:76090-76146:1:exon
so has part: feature:76518-76621:1:exon
so has part: feature:76742-76798:1:exon
so has part: feature:76886-76937:1:exon
so has part: feature:77655-77702:1:exon
so has part: feature:77944-77979:1:exon
so has part: feature:78174-78225:1:exon
so has part: feature:79524-79678:1:exon

XP_035192913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70779-70799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73987-74092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74900-75020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75223-75285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75476-75536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75881-75967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76090-76146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76518-76621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76742-76798:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76886-76937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77655-77702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77944-77979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:78174-78225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:79524-79678:1:exon

LOC118172848
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(86288..89815)
location: region:86288-89815:-1
so has part: feature:86288-89815:-1:exon
subclass of: SO_0000010

118172848
type: Gene
SIO_000068: ncbigene

position:86288:-1
position: 86288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89815:-1
position: 89815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86288-89815:-1:exon

LOC118172848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172848
product: uncharacterized LOC118172848, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035337039.1
SIO_010081: LOC118172848
subclass of: SO_0000673
so part of: LOC118172848
location: complement(join(86288..86797,87003..87049,87709..87762,88265..88549,89650..89815))
location: region:86288-89815:-1
so has part: feature:89650-89815:-1:exon
so has part: feature:88265-88549:-1:exon
so has part: feature:87709-87762:-1:exon
so has part: feature:87003-87049:-1:exon
so has part: feature:86288-86797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89650-89815:-1:exon

position:89650:-1
position: 89650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88265-88549:-1:exon

position:88265:-1
position: 88265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88549:-1
position: 88549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87709-87762:-1:exon

position:87709:-1
position: 87709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87762:-1
position: 87762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87003-87049:-1:exon

position:87003:-1
position: 87003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87049:-1
position: 87049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:86288-86797:-1:exon

position:86797:-1
position: 86797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118172848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172848
product: uncharacterized LOC118172848, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035337038.1
SIO_010081: LOC118172848
subclass of: SO_0000673
so part of: LOC118172848
location: complement(join(86288..87049,87203..87307,87709..87762,88265..88549,89650..89815))
location: region:86288-89815:-1
so has part: feature:89650-89815:-1:exon
so has part: feature:88265-88549:-1:exon
so has part: feature:87709-87762:-1:exon
so has part: feature:87203-87307:-1:exon
so has part: feature:86288-87049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89650-89815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88265-88549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87709-87762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87203-87307:-1:exon

position:87203:-1
position: 87203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87307:-1
position: 87307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:86288-87049:-1:exon

LOC118172848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118172848 isoform X2
translation: MSTLLVSSFLPLLLLAWLPAGLTHQSADSSITISASELSFKCLLQVAPYNTTVEQFIDRIKNVTEEKVEIRFLYEKSNSDFGGVNETEHETRTATCTCEKRNTSTVEAGTNQTQQESDPETSPTSTPKPQTQEGKSESKHVAEMNQLSTPQNEEVVYAKMKFEKTEIKPAASEVVYAEIKSQQK
SIO_010081: LOC118172848
subclass of: SO_0000673
so part of: LOC118172848
location: complement(join(86690..86797,87003..87049,87709..87762,88265..88549,89650..89710))
location: region:86690-89710:-1
so has part: feature:89650-89710:-1:exon
so has part: feature:88265-88549:-1:exon
so has part: feature:87709-87762:-1:exon
so has part: feature:87003-87049:-1:exon
so has part: feature:86690-86797:-1:exon

XP_035192930.1
type: Protein
SIO_000068: ncbiprotein

position:86690:-1
position: 86690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89710:-1
position: 89710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89650-89710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88265-88549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87709-87762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87003-87049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86690-86797:-1:exon

LOC118172848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118172848 isoform X1
translation: MSTLLVSSFLPLLLLAWLPAGLTHQSADSSITISASELSFKCLLQVAPYNTTVEQFIDRIKNVTEEKVEIRFLYEKSNSDFGGVNETEHETRTATCTCEKRNTSTVEAGTNQTQQESDPETSPTSTPKPQTQEEIIYTYIIPGLVVSSFFFLFCILVCLCRRKQRNAKGKSESKHVAEMNQLSTVSRGEFFMSCSVLIKSS
SIO_010081: LOC118172848
subclass of: SO_0000673
so part of: LOC118172848
location: complement(join(86949..87049,87203..87307,87709..87762,88265..88549,89650..89710))
location: region:86949-89710:-1
so has part: feature:89650-89710:-1:exon
so has part: feature:88265-88549:-1:exon
so has part: feature:87709-87762:-1:exon
so has part: feature:87203-87307:-1:exon
so has part: feature:86949-87049:-1:exon

XP_035192929.1
type: Protein
SIO_000068: ncbiprotein

position:86949:-1
position: 86949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89650-89710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88265-88549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87709-87762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87203-87307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86949-87049:-1:exon

GFOD2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: GFOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 91404..103696
location: region:91404-103696:1
so has part: feature:91404-103696:1:exon
subclass of: SO_0000010

118172845
type: Gene
SIO_000068: ncbigene

position:91404:1
position: 91404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103696:1
position: 103696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91404-103696:1:exon

GFOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GFOD2
product: glucose-fructose oxidoreductase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_035337031.1
SIO_010081: GFOD2
subclass of: SO_0000673
so part of: GFOD2
location: join(91404..91468,95602..95943,102065..103696)
location: region:91404-103696:1
so has part: feature:91404-91468:1:exon
so has part: feature:95602-95943:1:exon
so has part: feature:102065-103696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91404-91468:1:exon

position:91468:1
position: 91468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95602-95943:1:exon

position:95602:1
position: 95602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95943:1
position: 95943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:102065-103696:1:exon

position:102065:1
position: 102065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GFOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-fructose oxidoreductase domain-containing protein 2 isoform X1
translation: MEMLPGVGVFGTGSTARVLVPLLRAEGFSIEALWGKTEEEAKQLAEEMNISFYTSRTDDVLLHQDVDLVCINIPPPLTRQIAVKALGIGKNVICEKAATSVDAFRMVTAARYYPKLMSIVGNVLRFLPVFVKMKQLIEEHYVGNVMICDVRVYGGSLLSHKYNWICDELMGGGGLHTMGTYIIDLLTHLINRRAEKVHGLLKTFVKQNTAISGIRHVTSDDFCFFQMLMSEGVCCTVTLNFNMPGSFIHEVMVVGSAGRLIARGTDLYGQKNTALQEELLFTDALTVNKGLLDKGFKDIPLLYLKGMVYMVQALRKSFQDQEDRRTWDHKPVSMAASFEDGLYMQSVVEAIKKSSRSGEWEAVEVMTEEPDANQNLCEALQRNNL
SIO_010081: GFOD2
subclass of: SO_0000673
so part of: GFOD2
location: join(95685..95943,102065..102963)
location: region:95685-102963:1
so has part: feature:95685-95943:1:exon
so has part: feature:102065-102963:1:exon

XP_035192922.1
type: Protein
SIO_000068: ncbiprotein

position:95685:1
position: 95685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102963:1
position: 102963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95685-95943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102065-102963:1:exon

GFOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: GFOD2
product: glucose-fructose oxidoreductase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_035337032.1
SIO_010081: GFOD2
subclass of: SO_0000673
so part of: GFOD2
location: join(95751..95888,102065..103696)
location: region:95751-103696:1
so has part: feature:95751-95888:1:exon
so has part: feature:102065-103696:1:exon

position:95751:1
position: 95751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95751-95888:1:exon

position:95888:1
position: 95888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102065-103696:1:exon

GFOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: GFOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-fructose oxidoreductase domain-containing protein 2 isoform X2
translation: MVTAARYYPKLMSIVGNVLRFLPVFVKMKQLIEEHYVGNVMICDVRVYGGSLLSHKYNWICDELMGGGGLHTMGTYIIDLLTHLINRRAEKVHGLLKTFVKQNTAISGIRHVTSDDFCFFQMLMSEGVCCTVTLNFNMPGSFIHEVMVVGSAGRLIARGTDLYGQKNTALQEELLFTDALTVNKGLLDKGFKDIPLLYLKGMVYMVQALRKSFQDQEDRRTWDHKPVSMAASFEDGLYMQSVVEAIKKSSRSGEWEAVEVMTEEPDANQNLCEALQRNNL
SIO_010081: GFOD2
subclass of: SO_0000673
so part of: GFOD2
location: 102121..102963
location: region:102121-102963:1
so has part: feature:102121-102963:1:exon

XP_035192923.1
type: Protein
SIO_000068: ncbiprotein

position:102121:1
position: 102121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102121-102963:1:exon

LOC118172853
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(103713..104104)
location: region:103713-104104:-1
so has part: feature:103713-104104:-1:exon
subclass of: SO_0000011

118172853
type: Gene
SIO_000068: ncbigene

position:103713:-1
position: 103713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104104:-1
position: 104104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103713-104104:-1:exon

LOC118172853
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118172853
product: uncharacterized LOC118172853
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_004753880.1
SIO_010081: LOC118172853
subclass of: SO_0000673
so part of: LOC118172853
location: complement(join(103713..103837,103869..104104))
location: region:103713-104104:-1
so has part: feature:103869-104104:-1:exon
so has part: feature:103713-103837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103869-104104:-1:exon

position:103869:-1
position: 103869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103713-103837:-1:exon

position:103837:-1
position: 103837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C11H16orf86
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: C11H16orf86
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(106005..109104)
location: region:106005-109104:-1
so has part: feature:106005-109104:-1:exon
subclass of: SO_0000010

118172856
type: Gene
SIO_000068: ncbigene

position:106005:-1
position: 106005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109104:-1
position: 109104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106005-109104:-1:exon

C11H16orf86
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: C11H16orf86
product: chromosome 11 C16orf86 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035337043.1
SIO_010081: C11H16orf86
subclass of: SO_0000673
so part of: C11H16orf86
location: complement(join(106005..106201,107008..107115,107495..107638,108075..108256,108628..108785,108985..109104))
location: region:106005-109104:-1
so has part: feature:108985-109104:-1:exon
so has part: feature:108628-108785:-1:exon
so has part: feature:108075-108256:-1:exon
so has part: feature:107495-107638:-1:exon
so has part: feature:107008-107115:-1:exon
so has part: feature:106005-106201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108985-109104:-1:exon

position:108985:-1
position: 108985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108628-108785:-1:exon

position:108628:-1
position: 108628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108785:-1
position: 108785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108075-108256:-1:exon

position:108075:-1
position: 108075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108256:-1
position: 108256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107495-107638:-1:exon

position:107495:-1
position: 107495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107638:-1
position: 107638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107008-107115:-1:exon

position:107008:-1
position: 107008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107115:-1
position: 107115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:106005-106201:-1:exon

position:106201:-1
position: 106201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C11H16orf86
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: C11H16orf86
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C16orf86 homolog
translation: MEPPALVGSPAGQQSGGREPGHILAELSAALENPDIKALEWAEDGRGVIIHATLYEEELGRYKELFPALTDLGSVPVLQAWLLAHGFRLEEAQTNPPALVLQHADFQRVNPTAVELGTPGGNAGPSAKQQKKRKKRRRSSLQPCRKVTSWDALGRLPRLRPLYQYINYDMPELMCPSEEEGETLGLAETATGPELEGELQQAFDAQGHLPLTNWLSQGLRTHLTDSPFAASLMHNPQETWASSALELPAPALDDKPMQVDLEKPLSCTAYLVSPFFP
SIO_010081: C11H16orf86
subclass of: SO_0000673
so part of: C11H16orf86
location: complement(join(106080..106201,107008..107115,107495..107638,108075..108256,108628..108785,108985..109104))
location: region:106080-109104:-1
so has part: feature:108985-109104:-1:exon
so has part: feature:108628-108785:-1:exon
so has part: feature:108075-108256:-1:exon
so has part: feature:107495-107638:-1:exon
so has part: feature:107008-107115:-1:exon
so has part: feature:106080-106201:-1:exon

XP_035192934.1
type: Protein
SIO_000068: ncbiprotein

position:106080:-1
position: 106080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108985-109104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108628-108785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108075-108256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107495-107638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107008-107115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:106080-106201:-1:exon

HERPUD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: HERPUD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 127521..133259
location: region:127521-133259:1
so has part: feature:127521-133259:1:exon
subclass of: SO_0000010

118172844
type: Gene
SIO_000068: ncbigene

position:127521:1
position: 127521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133259:1
position: 133259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127521-133259:1:exon

HERPUD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HERPUD1
product: homocysteine inducible ER protein with ubiquitin like domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035337029.1
SIO_010081: HERPUD1
subclass of: SO_0000673
so part of: HERPUD1
location: join(127521..127684,127930..128007,128089..128163,129119..129237,129569..129691,130315..130662,131536..131641,132245..133259)
location: region:127521-133259:1
so has part: feature:127521-127684:1:exon
so has part: feature:127930-128007:1:exon
so has part: feature:128089-128163:1:exon
so has part: feature:129119-129237:1:exon
so has part: feature:129569-129691:1:exon
so has part: feature:130315-130662:1:exon
so has part: feature:131536-131641:1:exon
so has part: feature:132245-133259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127521-127684:1:exon

position:127684:1
position: 127684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127930-128007:1:exon

position:127930:1
position: 127930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128007:1
position: 128007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128089-128163:1:exon

position:128089:1
position: 128089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128163:1
position: 128163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129119-129237:1:exon

position:129119:1
position: 129119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129237:1
position: 129237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:129569-129691:1:exon

position:129569:1
position: 129569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129691:1
position: 129691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:130315-130662:1:exon

position:130315:1
position: 130315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130662:1
position: 130662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131536-131641:1:exon

position:131536:1
position: 131536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131641:1
position: 131641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:132245-133259:1:exon

position:132245:1
position: 132245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HERPUD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: HERPUD1
product: homocysteine inducible ER protein with ubiquitin like domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035337030.1
SIO_010081: HERPUD1
subclass of: SO_0000673
so part of: HERPUD1
location: join(127521..127684,127930..128007,128089..128163,129119..129237,129569..129691,130315..130662,131536..131641,132248..133259)
location: region:127521-133259:1
so has part: feature:127521-127684:1:exon
so has part: feature:127930-128007:1:exon
so has part: feature:128089-128163:1:exon
so has part: feature:129119-129237:1:exon
so has part: feature:129569-129691:1:exon
so has part: feature:130315-130662:1:exon
so has part: feature:131536-131641:1:exon
so has part: feature:132248-133259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127521-127684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127930-128007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128089-128163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129119-129237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129569-129691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:130315-130662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131536-131641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:132248-133259:1:exon

position:132248:1
position: 132248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HERPUD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HERPUD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform X1
translation: MAEPMQLSLLVRSPARRHPDLRLSAEPAWTVRRLKAELRRIVPGAPPEEEQKLIYCGKLLLDHQHLQEFLPKQEELHALHLVYNLKAPANVQETNSEVKTDQPRLMSEASQEPAASSSNGERLRCSSGQASAEANTRLETPPNPFQTMAPGFSAYTTYSMLQMSWLQQIYARQYYMQYLASTAASADQSHPRRSQEIPVAQVTPPAPLPDPFPAQNQPGNQNAAPQVNAAANQNLRMNAQGGPLMEEEEEGGNRDWLDWLYSATLFYVFVNIIYFYSSISRFLLVMGGTVLMYLHHVGWFPFRQRPVQHFPDNVPPQAAVNQDQNNNLQQGGNADRADDNEAAADEGQALPELQQANPSFMSTAWVFFKTFFASLLPEGPRVTRN
SIO_010081: HERPUD1
subclass of: SO_0000673
so part of: HERPUD1
location: join(127547..127684,127930..128007,128089..128163,129119..129237,129569..129691,130315..130662,131536..131641,132245..132415)
location: region:127547-132415:1
so has part: feature:127547-127684:1:exon
so has part: feature:127930-128007:1:exon
so has part: feature:128089-128163:1:exon
so has part: feature:129119-129237:1:exon
so has part: feature:129569-129691:1:exon
so has part: feature:130315-130662:1:exon
so has part: feature:131536-131641:1:exon
so has part: feature:132245-132415:1:exon

XP_035192920.1
type: Protein
SIO_000068: ncbiprotein

position:127547:1
position: 127547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132415:1
position: 132415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127547-127684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127930-128007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128089-128163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129119-129237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129569-129691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:130315-130662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131536-131641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:132245-132415:1:exon

HERPUD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: HERPUD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform X2
translation: MAEPMQLSLLVRSPARRHPDLRLSAEPAWTVRRLKAELRRIVPGAPPEEEQKLIYCGKLLLDHQHLQEFLPKQEELHALHLVYNLKAPANVQETNSEVKTDQPRLMSEASQEPAASSSNGERLRCSSGQASAEANTRLETPPNPFQTMAPGFSAYTTYSMLQMSWLQQIYARQYYMQYLASTAASADQSHPRRSQEIPVAQVTPPAPLPDPFPAQNQPGNQNAAPQVNAAANQNLRMNAQGGPLMEEEEEGGNRDWLDWLYSATLFYVFVNIIYFYSSISRFLLVMGGTVLMYLHHVGWFPFRQRPVQHFPDNVPPQAAVNQDQNNNLQGGNADRADDNEAAADEGQALPELQQANPSFMSTAWVFFKTFFASLLPEGPRVTRN
SIO_010081: HERPUD1
subclass of: SO_0000673
so part of: HERPUD1
location: join(127547..127684,127930..128007,128089..128163,129119..129237,129569..129691,130315..130662,131536..131641,132248..132415)
location: region:127547-132415:1
so has part: feature:127547-127684:1:exon
so has part: feature:127930-128007:1:exon
so has part: feature:128089-128163:1:exon
so has part: feature:129119-129237:1:exon
so has part: feature:129569-129691:1:exon
so has part: feature:130315-130662:1:exon
so has part: feature:131536-131641:1:exon
so has part: feature:132248-132415:1:exon

XP_035192921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127547-127684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127930-128007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128089-128163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129119-129237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129569-129691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:130315-130662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131536-131641:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:132248-132415:1:exon

CETP
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CETP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 137917..147223
location: region:137917-147223:1
so has part: feature:137917-147223:1:exon
subclass of: SO_0000010

118172839
type: Gene
SIO_000068: ncbigene

position:137917:1
position: 137917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147223:1
position: 147223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137917-147223:1:exon

CETP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CETP
product: cholesteryl ester transfer protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_035337024.1
SIO_010081: CETP
subclass of: SO_0000673
so part of: CETP
location: join(137917..138120,139024..139138,139946..140080,140609..140679,141677..141764,141854..141923,142478..142538,143168..143259,143515..143694,144115..144165,144493..144660,145543..145610,145730..145772,145857..145926,146276..146361,146478..147223)
location: region:137917-147223:1
so has part: feature:137917-138120:1:exon
so has part: feature:139024-139138:1:exon
so has part: feature:139946-140080:1:exon
so has part: feature:140609-140679:1:exon
so has part: feature:141677-141764:1:exon
so has part: feature:141854-141923:1:exon
so has part: feature:142478-142538:1:exon
so has part: feature:143168-143259:1:exon
so has part: feature:143515-143694:1:exon
so has part: feature:144115-144165:1:exon
so has part: feature:144493-144660:1:exon
so has part: feature:145543-145610:1:exon
so has part: feature:145730-145772:1:exon
so has part: feature:145857-145926:1:exon
so has part: feature:146276-146361:1:exon
so has part: feature:146478-147223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137917-138120:1:exon

position:138120:1
position: 138120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139024-139138:1:exon

position:139024:1
position: 139024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139138:1
position: 139138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139946-140080:1:exon

position:139946:1
position: 139946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140080:1
position: 140080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:140609-140679:1:exon

position:140609:1
position: 140609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140679:1
position: 140679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141677-141764:1:exon

position:141677:1
position: 141677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141764:1
position: 141764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141854-141923:1:exon

position:141854:1
position: 141854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141923:1
position: 141923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:142478-142538:1:exon

position:142478:1
position: 142478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142538:1
position: 142538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:143168-143259:1:exon

position:143168:1
position: 143168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143259:1
position: 143259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:143515-143694:1:exon

position:143515:1
position: 143515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143694:1
position: 143694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:144115-144165:1:exon

position:144115:1
position: 144115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144165:1
position: 144165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:144493-144660:1:exon

position:144493:1
position: 144493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144660:1
position: 144660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:145543-145610:1:exon

position:145543:1
position: 145543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145610:1
position: 145610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:145730-145772:1:exon

position:145730:1
position: 145730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145772:1
position: 145772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:145857-145926:1:exon

position:145857:1
position: 145857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145926:1
position: 145926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:146276-146361:1:exon

position:146276:1
position: 146276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146361:1
position: 146361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:146478-147223:1:exon

position:146478:1
position: 146478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CETP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CETP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cholesteryl ester transfer protein isoform X1
translation: MLWAGRMRLGTIGILLALVHTAAACEFGPVPYRATGIVCRMTKPAALLLNQETAQVIQAAFRNAKFPNITGERSVRLLGKVAYGLGNIQVNDLSIEQSEVELKENDAIDIAIKNVTAFFKGTLTYGYAGAWFLQLFHSVDFEIESSIDLQINIKLMCQEDQVAADASDCYLSFHKLTLHLQGDKEPGWLKQLFTDFISFTLKFVLKREVCNEINFLAQVLANYVHDLAANFVRDEDIGLDISLASDPLIKANYLESHHKGLVMYKNYSDAFSDSVFSPSLLSESRMLYFWLSEHILNSLASAAFIDERLVMTISGKKLQELFEIEDTEVQQKAVQLIFRGTSYNDSVAKVWSLTHPEISLQPEGTVVKSLVAVEINIFPPGEESLMVLYMEKEITVTIQADYAEKKLILRPLDSRTEFKVFKFTADPSENDQSIRNFLQKMISVVGIPEVISRIEPALTSLMNSKGLHLFEIKNPEIITRKGYLIVQLDFSFPNHLLLDFLQQRF
SIO_010081: CETP
subclass of: SO_0000673
so part of: CETP
location: join(137976..138120,139024..139138,139946..140080,140609..140679,141677..141764,141854..141923,142478..142538,143168..143259,143515..143694,144115..144165,144493..144660,145543..145610,145730..145772,145857..145926,146276..146361,146478..146552)
location: region:137976-146552:1
so has part: feature:137976-138120:1:exon
so has part: feature:139024-139138:1:exon
so has part: feature:139946-140080:1:exon
so has part: feature:140609-140679:1:exon
so has part: feature:141677-141764:1:exon
so has part: feature:141854-141923:1:exon
so has part: feature:142478-142538:1:exon
so has part: feature:143168-143259:1:exon
so has part: feature:143515-143694:1:exon
so has part: feature:144115-144165:1:exon
so has part: feature:144493-144660:1:exon
so has part: feature:145543-145610:1:exon
so has part: feature:145730-145772:1:exon
so has part: feature:145857-145926:1:exon
so has part: feature:146276-146361:1:exon
so has part: feature:146478-146552:1:exon

XP_035192915.1
type: Protein
SIO_000068: ncbiprotein

position:137976:1
position: 137976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146552:1
position: 146552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137976-138120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139024-139138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139946-140080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140609-140679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141677-141764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141854-141923:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142478-142538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:143168-143259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:143515-143694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144115-144165:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144493-144660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145543-145610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145730-145772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145857-145926:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:146276-146361:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:146478-146552:1:exon

CETP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CETP
product: cholesteryl ester transfer protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_035337025.1
SIO_010081: CETP
subclass of: SO_0000673
so part of: CETP
location: join(138839..138858,138941..139138,139946..140080,140609..140679,141677..141764,141854..141923,142478..142538,143168..143259,143515..143694,144115..144165,144493..144660,145543..145610,145730..145772,145857..145926,146276..146361,146478..147223)
location: region:138839-147223:1
so has part: feature:138839-138858:1:exon
so has part: feature:138941-139138:1:exon
so has part: feature:139946-140080:1:exon
so has part: feature:140609-140679:1:exon
so has part: feature:141677-141764:1:exon
so has part: feature:141854-141923:1:exon
so has part: feature:142478-142538:1:exon
so has part: feature:143168-143259:1:exon
so has part: feature:143515-143694:1:exon
so has part: feature:144115-144165:1:exon
so has part: feature:144493-144660:1:exon
so has part: feature:145543-145610:1:exon
so has part: feature:145730-145772:1:exon
so has part: feature:145857-145926:1:exon
so has part: feature:146276-146361:1:exon
so has part: feature:146478-147223:1:exon

position:138839:1
position: 138839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138839-138858:1:exon

position:138858:1
position: 138858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:138941-139138:1:exon

position:138941:1
position: 138941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139946-140080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140609-140679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141677-141764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141854-141923:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142478-142538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:143168-143259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:143515-143694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144115-144165:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144493-144660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145543-145610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145730-145772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145857-145926:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:146276-146361:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:146478-147223:1:exon

CETP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CETP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cholesteryl ester transfer protein isoform X2
translation: MCALIPAADLILQPEETALWYLCSFLAPTVNQETAQVIQAAFRNAKFPNITGERSVRLLGKVAYGLGNIQVNDLSIEQSEVELKENDAIDIAIKNVTAFFKGTLTYGYAGAWFLQLFHSVDFEIESSIDLQINIKLMCQEDQVAADASDCYLSFHKLTLHLQGDKEPGWLKQLFTDFISFTLKFVLKREVCNEINFLAQVLANYVHDLAANFVRDEDIGLDISLASDPLIKANYLESHHKGLVMYKNYSDAFSDSVFSPSLLSESRMLYFWLSEHILNSLASAAFIDERLVMTISGKKLQELFEIEDTEVQQKAVQLIFRGTSYNDSVAKVWSLTHPEISLQPEGTVVKSLVAVEINIFPPGEESLMVLYMEKEITVTIQADYAEKKLILRPLDSRTEFKVFKFTADPSENDQSIRNFLQKMISVVGIPEVISRIEPALTSLMNSKGLHLFEIKNPEIITRKGYLIVQLDFSFPNHLLLDFLQQRF
SIO_010081: CETP
subclass of: SO_0000673
so part of: CETP
location: join(138854..138858,138941..139138,139946..140080,140609..140679,141677..141764,141854..141923,142478..142538,143168..143259,143515..143694,144115..144165,144493..144660,145543..145610,145730..145772,145857..145926,146276..146361,146478..146552)
location: region:138854-146552:1
so has part: feature:138854-138858:1:exon
so has part: feature:138941-139138:1:exon
so has part: feature:139946-140080:1:exon
so has part: feature:140609-140679:1:exon
so has part: feature:141677-141764:1:exon
so has part: feature:141854-141923:1:exon
so has part: feature:142478-142538:1:exon
so has part: feature:143168-143259:1:exon
so has part: feature:143515-143694:1:exon
so has part: feature:144115-144165:1:exon
so has part: feature:144493-144660:1:exon
so has part: feature:145543-145610:1:exon
so has part: feature:145730-145772:1:exon
so has part: feature:145857-145926:1:exon
so has part: feature:146276-146361:1:exon
so has part: feature:146478-146552:1:exon

XP_035192916.1
type: Protein
SIO_000068: ncbiprotein

position:138854:1
position: 138854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138854-138858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138941-139138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139946-140080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140609-140679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141677-141764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141854-141923:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142478-142538:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:143168-143259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:143515-143694:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144115-144165:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144493-144660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145543-145610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145730-145772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145857-145926:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:146276-146361:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:146478-146552:1:exon

NLRC5
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: NLRC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 148948..201025
location: region:148948-201025:1
so has part: feature:148948-201025:1:exon
subclass of: SO_0000010

118172832
type: Gene
SIO_000068: ncbigene

position:148948:1
position: 148948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201025:1
position: 201025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148948-201025:1:exon

NLRC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NLRC5
product: NLR family CARD domain containing 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_035337012.1
SIO_010081: NLRC5
subclass of: SO_0000673
so part of: NLRC5
location: join(148948..149102,153961..154149,154611..154911,156201..156263,159461..159526,161123..162875,164706..164789,165119..165202,165283..165366,166374..166463,167316..167366,168316..168381,169435..169518,170435..170518,170921..171010,172041..172106,173106..173183,174399..174482,175559..175642,176847..176936,177063..177110,177544..177618,178672..178755,179733..179816,181357..181446,181556..181618,182463..182546,183023..183106,183666..183755,184452..184517,185142..185225,185309..185392,186009..186095,186723..186803,187375..187458,187855..187938,188610..188693,189338..189421,189514..189597,190299..190382,191363..191446,192900..192983,193982..194065,194996..195079,195233..195316,196518..196601,197729..197812,198920..201025)
location: region:148948-201025:1
so has part: feature:148948-149102:1:exon
so has part: feature:153961-154149:1:exon
so has part: feature:154611-154911:1:exon
so has part: feature:156201-156263:1:exon
so has part: feature:159461-159526:1:exon
so has part: feature:161123-162875:1:exon
so has part: feature:164706-164789:1:exon
so has part: feature:165119-165202:1:exon
so has part: feature:165283-165366:1:exon
so has part: feature:166374-166463:1:exon
so has part: feature:167316-167366:1:exon
so has part: feature:168316-168381:1:exon
so has part: feature:169435-169518:1:exon
so has part: feature:170435-170518:1:exon
so has part: feature:170921-171010:1:exon
so has part: feature:172041-172106:1:exon
so has part: feature:173106-173183:1:exon
so has part: feature:174399-174482:1:exon
so has part: feature:175559-175642:1:exon
so has part: feature:176847-176936:1:exon
so has part: feature:177063-177110:1:exon
so has part: feature:177544-177618:1:exon
so has part: feature:178672-178755:1:exon
so has part: feature:179733-179816:1:exon
so has part: feature:181357-181446:1:exon
so has part: feature:181556-181618:1:exon
so has part: feature:182463-182546:1:exon
so has part: feature:183023-183106:1:exon
so has part: feature:183666-183755:1:exon
so has part: feature:184452-184517:1:exon
so has part: feature:185142-185225:1:exon
so has part: feature:185309-185392:1:exon
so has part: feature:186009-186095:1:exon
so has part: feature:186723-186803:1:exon
so has part: feature:187375-187458:1:exon
so has part: feature:187855-187938:1:exon
so has part: feature:188610-188693:1:exon
so has part: feature:189338-189421:1:exon
so has part: feature:189514-189597:1:exon
so has part: feature:190299-190382:1:exon
so has part: feature:191363-191446:1:exon
so has part: feature:192900-192983:1:exon
so has part: feature:193982-194065:1:exon
so has part: feature:194996-195079:1:exon
so has part: feature:195233-195316:1:exon
so has part: feature:196518-196601:1:exon
so has part: feature:197729-197812:1:exon
so has part: feature:198920-201025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148948-149102:1:exon

position:149102:1
position: 149102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153961-154149:1:exon

position:153961:1
position: 153961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154149:1
position: 154149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154611-154911:1:exon

position:154611:1
position: 154611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154911:1
position: 154911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156201-156263:1:exon

position:156201:1
position: 156201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156263:1
position: 156263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:159461-159526:1:exon

position:159461:1
position: 159461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159526:1
position: 159526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161123-162875:1:exon

position:161123:1
position: 161123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162875:1
position: 162875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164706-164789:1:exon

position:164706:1
position: 164706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164789:1
position: 164789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:165119-165202:1:exon

position:165119:1
position: 165119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165202:1
position: 165202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:165283-165366:1:exon

position:165283:1
position: 165283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165366:1
position: 165366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:166374-166463:1:exon

position:166374:1
position: 166374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166463:1
position: 166463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:167316-167366:1:exon

position:167316:1
position: 167316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167366:1
position: 167366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:168316-168381:1:exon

position:168316:1
position: 168316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168381:1
position: 168381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:169435-169518:1:exon

position:169435:1
position: 169435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169518:1
position: 169518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:170435-170518:1:exon

position:170435:1
position: 170435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170518:1
position: 170518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:170921-171010:1:exon

position:170921:1
position: 170921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171010:1
position: 171010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:172041-172106:1:exon

position:172041:1
position: 172041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172106:1
position: 172106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:173106-173183:1:exon

position:173106:1
position: 173106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173183:1
position: 173183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:174399-174482:1:exon

position:174399:1
position: 174399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174482:1
position: 174482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:175559-175642:1:exon

position:175559:1
position: 175559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175642:1
position: 175642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:176847-176936:1:exon

position:176847:1
position: 176847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176936:1
position: 176936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:177063-177110:1:exon

position:177063:1
position: 177063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177110:1
position: 177110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:177544-177618:1:exon

position:177544:1
position: 177544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177618:1
position: 177618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:178672-178755:1:exon

position:178672:1
position: 178672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178755:1
position: 178755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:179733-179816:1:exon

position:179733:1
position: 179733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179816:1
position: 179816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:181357-181446:1:exon

position:181357:1
position: 181357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181446:1
position: 181446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:181556-181618:1:exon

position:181556:1
position: 181556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181618:1
position: 181618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:182463-182546:1:exon

position:182463:1
position: 182463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182546:1
position: 182546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:183023-183106:1:exon

position:183023:1
position: 183023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183106:1
position: 183106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:183666-183755:1:exon

position:183666:1
position: 183666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183755:1
position: 183755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:184452-184517:1:exon

position:184452:1
position: 184452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184517:1
position: 184517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:185142-185225:1:exon

position:185142:1
position: 185142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185225:1
position: 185225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:185309-185392:1:exon

position:185309:1
position: 185309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185392:1
position: 185392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:186009-186095:1:exon

position:186009:1
position: 186009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186095:1
position: 186095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:186723-186803:1:exon

position:186723:1
position: 186723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186803:1
position: 186803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:187375-187458:1:exon

position:187375:1
position: 187375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187458:1
position: 187458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:187855-187938:1:exon

position:187855:1
position: 187855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187938:1
position: 187938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:188610-188693:1:exon

position:188610:1
position: 188610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188693:1
position: 188693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:189338-189421:1:exon

position:189338:1
position: 189338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189421:1
position: 189421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:189514-189597:1:exon

position:189514:1
position: 189514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189597:1
position: 189597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:190299-190382:1:exon

position:190299:1
position: 190299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190382:1
position: 190382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:191363-191446:1:exon

position:191363:1
position: 191363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191446:1
position: 191446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:192900-192983:1:exon

position:192900:1
position: 192900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192983:1
position: 192983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:193982-194065:1:exon

position:193982:1
position: 193982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194065:1
position: 194065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:194996-195079:1:exon

position:194996:1
position: 194996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195079:1
position: 195079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:195233-195316:1:exon

position:195233:1
position: 195233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195316:1
position: 195316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:196518-196601:1:exon

position:196518:1
position: 196518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196601:1
position: 196601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:197729-197812:1:exon

position:197729:1
position: 197729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197812:1
position: 197812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:198920-201025:1:exon

position:198920:1
position: 198920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NLRC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NLRC5
product: NLR family CARD domain containing 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_035337013.1
SIO_010081: NLRC5
subclass of: SO_0000673
so part of: NLRC5
location: join(150772..150896,153961..154149,154611..154911,156201..156263,159461..159526,161123..162875,164706..164789,165119..165202,165283..165366,166374..166463,167316..167366,168316..168381,169435..169518,170435..170518,170921..171010,172041..172106,173106..173183,174399..174482,175559..175642,176847..176936,177063..177110,177544..177618,178672..178755,179733..179816,181357..181446,181556..181618,182463..182546,183023..183106,183666..183755,184452..184517,185142..185225,185309..185392,186009..186095,186723..186803,187375..187458,187855..187938,188610..188693,189338..189421,189514..189597,190299..190382,191363..191446,192900..192983,193982..194065,194996..195079,195233..195316,196518..196601,197729..197812,198920..201025)
location: region:150772-201025:1
so has part: feature:150772-150896:1:exon
so has part: feature:153961-154149:1:exon
so has part: feature:154611-154911:1:exon
so has part: feature:156201-156263:1:exon
so has part: feature:159461-159526:1:exon
so has part: feature:161123-162875:1:exon
so has part: feature:164706-164789:1:exon
so has part: feature:165119-165202:1:exon
so has part: feature:165283-165366:1:exon
so has part: feature:166374-166463:1:exon
so has part: feature:167316-167366:1:exon
so has part: feature:168316-168381:1:exon
so has part: feature:169435-169518:1:exon
so has part: feature:170435-170518:1:exon
so has part: feature:170921-171010:1:exon
so has part: feature:172041-172106:1:exon
so has part: feature:173106-173183:1:exon
so has part: feature:174399-174482:1:exon
so has part: feature:175559-175642:1:exon
so has part: feature:176847-176936:1:exon
so has part: feature:177063-177110:1:exon
so has part: feature:177544-177618:1:exon
so has part: feature:178672-178755:1:exon
so has part: feature:179733-179816:1:exon
so has part: feature:181357-181446:1:exon
so has part: feature:181556-181618:1:exon
so has part: feature:182463-182546:1:exon
so has part: feature:183023-183106:1:exon
so has part: feature:183666-183755:1:exon
so has part: feature:184452-184517:1:exon
so has part: feature:185142-185225:1:exon
so has part: feature:185309-185392:1:exon
so has part: feature:186009-186095:1:exon
so has part: feature:186723-186803:1:exon
so has part: feature:187375-187458:1:exon
so has part: feature:187855-187938:1:exon
so has part: feature:188610-188693:1:exon
so has part: feature:189338-189421:1:exon
so has part: feature:189514-189597:1:exon
so has part: feature:190299-190382:1:exon
so has part: feature:191363-191446:1:exon
so has part: feature:192900-192983:1:exon
so has part: feature:193982-194065:1:exon
so has part: feature:194996-195079:1:exon
so has part: feature:195233-195316:1:exon
so has part: feature:196518-196601:1:exon
so has part: feature:197729-197812:1:exon
so has part: feature:198920-201025:1:exon

position:150772:1
position: 150772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150772-150896:1:exon

position:150896:1
position: 150896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153961-154149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154611-154911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156201-156263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159461-159526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161123-162875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164706-164789:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165119-165202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165283-165366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:166374-166463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:167316-167366:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:168316-168381:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:169435-169518:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:170435-170518:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:170921-171010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:172041-172106:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:173106-173183:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:174399-174482:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:175559-175642:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176847-176936:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177063-177110:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:177544-177618:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:178672-178755:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:179733-179816:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181357-181446:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:181556-181618:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:182463-182546:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:183023-183106:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:183666-183755:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:184452-184517:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:185142-185225:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:185309-185392:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:186009-186095:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:186723-186803:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:187375-187458:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:187855-187938:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:188610-188693:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:189338-189421:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:189514-189597:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:190299-190382:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:191363-191446:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:192900-192983:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:193982-194065:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:194996-195079:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:195233-195316:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:196518-196601:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:197729-197812:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:198920-201025:1:exon

NLRC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NLRC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NLRC5
translation: MQPLLQNDDLNLEAAIASIRPQLVEFLSHHQDWLLTTSQHFLPGATLRGLDGITDHREKVSELLDLLEKAGPATWKQFAQHLCMECDLPMELEILLMSSAGEGNLSQKQEARIDVSAWSSVPKGFARHRRSSSSISDKDAKQKRLDSAENYRHLLIDTVRQRYGSRRAAGAAAQEQMQPLAFNQAFVNLVIRQSKASRLKEKTDKPREDLPSAPEPEECVDTAMRVSDLFGSVVRSGTTKLIFLFGKPGTGKTMLMHRICQKWAEGVLHQFLFTFLFEFRQLNLLKRKLTLKELLFDLFLQPEESPDAVFQHLLENAQRILIIFDGLDEFTGSMDMSSTSKGGPALPSHMSISELFADLCHGKLLPGCTVLVTSRPKRLPDLLNTVDVLAEVWGFDHKKVEEYVSHYFHHHSFKEQAIAHLKNNTKLLNMCLIPALCYVVCICLEYLLLKHQMSVELPQTMTQFYIKMLLIFINKQQGEHAVDEETQLNCNKKAILGLCDLALKGLEDKKLVFYVSDIPEHVKEFASLHGLLTVFEVKTSGTHPEAGYAFVHLSLQEFFAALCLMINKRVDKSYLKKKFSLKSKWTLRNEAKTEFIESFHIFLSGLSSKECRTFLMLLAEQNEAWVQDKQDAILQSLKKLAATHLTGPKVIELCHCTFETQDLKVAQHIGSLLNFKYEFKNFRLTPLDMSALVFVINSGQDLTHLDFAGCLMDAGCLEVLASCKNVEHLSFRSRRFGDDFAAALSKSLREMGSLKKLELTGGNITAEGLTNLVQASSQCLQLEELNLQDNRIRDLEVKRVLDLFSRMEKLKKIDLSNNNLSLNAVLILAKEVITCQNATELHVRKDTVIINFSGTSGEVPRSLDLRWEENKEYVIPTRHMKLCLRDRSLSLQHAKEIVSILQSCPHLSEVDLSGNKLGDEGCSCLLESLPWISISKQLDLSHNLLSINGVYSLLKSVNTCQKTMEVEVSLCHKTAVLRFTEDREFDSPPHREEPLYPTDDQQVGEERQTPTLSKKIRLTDCHFQASDLEKLCAVLKECSSISELDLSNNSLGDEGLSRLFQFLPNLKMLRSLRLDNNRISLKSVFCLAQSLSTLEHIKTMNLSLGHKQAVHLSFWERIRDRSTGRLRRNFLVHPEHIANGQCFRLRDCTMGPEDVTRLCQILAHCTQLTEIELSGNSLSDQSIERLLSFLPYLCHLTLLSIKNSIFSPRCTILFTNSISLCERIRKVEVRSNQNAFLHLGTSTQSQKTSFRLTDCAISQRQIEELCRVLEQHGRLSEVDLSRNQLGDESLRFLLDHLHRVHVTCSLNLSHNRISQDGVLHLINAFATSGNTTEVLVSLCSKATLIMKLTSRDDPRKILSLAECNFQPEHMEKLWLVLEKCTSLTEYISSDNNLSVHAAERLLHSLRKTPGPLKISIKEPWVCKKSVTNLLELAVQACGNITAIVICKDKSLFQLGIRFPCCLEKVESVVSRSNLHEPEIKRDCLYQRVLEKCIQLQELRWSHVELHDDDTKILVTVLLPLPKLKKFELTSCSIMPTGVDYLMSGLQKCQATEELNLGHMKLSDAAIPKLVLGLCKMPSLKRLILNHNSIGNDGCSRLAEALRNMHCMEEINLAHNKIGDPGLINLATVLLEMQNLKRINLSGNSPSPAGGEKLMEALGYCKHIEELLLSRNVFGDGAAVKLALCLPHVSSLKILHLQKNNIGPTGGTELARALAACGLLEEISLSENDLGEGSIHALSEGLPHLEHLRKIDLKLCGITDCSSKSLSCAFQQCPAMEEIILSWNSLGDGGAQELASALPGMEKLKMLDLEKNRIGAHGAVKLSEELVKCPEIQFIRLWDNPVPKGLAADLTSQDPRLCFSFY
SIO_010081: NLRC5
subclass of: SO_0000673
so part of: NLRC5
location: join(154144..154149,154611..154911,156201..156263,159461..159526,161123..162875,164706..164789,165119..165202,165283..165366,166374..166463,167316..167366,168316..168381,169435..169518,170435..170518,170921..171010,172041..172106,173106..173183,174399..174482,175559..175642,176847..176936,177063..177110,177544..177618,178672..178755,179733..179816,181357..181446,181556..181618,182463..182546,183023..183106,183666..183755,184452..184517,185142..185225,185309..185392,186009..186095,186723..186803,187375..187458,187855..187938,188610..188693,189338..189421,189514..189597,190299..190382,191363..191446,192900..192983,193982..194065,194996..195079,195233..195316,196518..196601,197729..197812,198920..199001)
location: region:154144-199001:1
so has part: feature:154144-154149:1:exon
so has part: feature:154611-154911:1:exon
so has part: feature:156201-156263:1:exon
so has part: feature:159461-159526:1:exon
so has part: feature:161123-162875:1:exon
so has part: feature:164706-164789:1:exon
so has part: feature:165119-165202:1:exon
so has part: feature:165283-165366:1:exon
so has part: feature:166374-166463:1:exon
so has part: feature:167316-167366:1:exon
so has part: feature:168316-168381:1:exon
so has part: feature:169435-169518:1:exon
so has part: feature:170435-170518:1:exon
so has part: feature:170921-171010:1:exon
so has part: feature:172041-172106:1:exon
so has part: feature:173106-173183:1:exon
so has part: feature:174399-174482:1:exon
so has part: feature:175559-175642:1:exon
so has part: feature:176847-176936:1:exon
so has part: feature:177063-177110:1:exon
so has part: feature:177544-177618:1:exon
so has part: feature:178672-178755:1:exon
so has part: feature:179733-179816:1:exon
so has part: feature:181357-181446:1:exon
so has part: feature:181556-181618:1:exon
so has part: feature:182463-182546:1:exon
so has part: feature:183023-183106:1:exon
so has part: feature:183666-183755:1:exon
so has part: feature:184452-184517:1:exon
so has part: feature:185142-185225:1:exon
so has part: feature:185309-185392:1:exon
so has part: feature:186009-186095:1:exon
so has part: feature:186723-186803:1:exon
so has part: feature:187375-187458:1:exon
so has part: feature:187855-187938:1:exon
so has part: feature:188610-188693:1:exon
so has part: feature:189338-189421:1:exon
so has part: feature:189514-189597:1:exon
so has part: feature:190299-190382:1:exon
so has part: feature:191363-191446:1:exon
so has part: feature:192900-192983:1:exon
so has part: feature:193982-194065:1:exon
so has part: feature:194996-195079:1:exon
so has part: feature:195233-195316:1:exon
so has part: feature:196518-196601:1:exon
so has part: feature:197729-197812:1:exon
so has part: feature:198920-199001:1:exon

XP_035192903.1
type: Protein
SIO_000068: ncbiprotein

position:154144:1
position: 154144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199001:1
position: 199001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154144-154149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154611-154911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156201-156263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159461-159526:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161123-162875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164706-164789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165119-165202:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165283-165366:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166374-166463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167316-167366:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:168316-168381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:169435-169518:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:170435-170518:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:170921-171010:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:172041-172106:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:173106-173183:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:174399-174482:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:175559-175642:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176847-176936:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177063-177110:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177544-177618:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:178672-178755:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:179733-179816:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:181357-181446:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181556-181618:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:182463-182546:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:183023-183106:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:183666-183755:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:184452-184517:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:185142-185225:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:185309-185392:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:186009-186095:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:186723-186803:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:187375-187458:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:187855-187938:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:188610-188693:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:189338-189421:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:189514-189597:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:190299-190382:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:191363-191446:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:192900-192983:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:193982-194065:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:194996-195079:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:195233-195316:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:196518-196601:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:197729-197812:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:198920-199001:1:exon

NLRC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NLRC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NLRC5
translation: MQPLLQNDDLNLEAAIASIRPQLVEFLSHHQDWLLTTSQHFLPGATLRGLDGITDHREKVSELLDLLEKAGPATWKQFAQHLCMECDLPMELEILLMSSAGEGNLSQKQEARIDVSAWSSVPKGFARHRRSSSSISDKDAKQKRLDSAENYRHLLIDTVRQRYGSRRAAGAAAQEQMQPLAFNQAFVNLVIRQSKASRLKEKTDKPREDLPSAPEPEECVDTAMRVSDLFGSVVRSGTTKLIFLFGKPGTGKTMLMHRICQKWAEGVLHQFLFTFLFEFRQLNLLKRKLTLKELLFDLFLQPEESPDAVFQHLLENAQRILIIFDGLDEFTGSMDMSSTSKGGPALPSHMSISELFADLCHGKLLPGCTVLVTSRPKRLPDLLNTVDVLAEVWGFDHKKVEEYVSHYFHHHSFKEQAIAHLKNNTKLLNMCLIPALCYVVCICLEYLLLKHQMSVELPQTMTQFYIKMLLIFINKQQGEHAVDEETQLNCNKKAILGLCDLALKGLEDKKLVFYVSDIPEHVKEFASLHGLLTVFEVKTSGTHPEAGYAFVHLSLQEFFAALCLMINKRVDKSYLKKKFSLKSKWTLRNEAKTEFIESFHIFLSGLSSKECRTFLMLLAEQNEAWVQDKQDAILQSLKKLAATHLTGPKVIELCHCTFETQDLKVAQHIGSLLNFKYEFKNFRLTPLDMSALVFVINSGQDLTHLDFAGCLMDAGCLEVLASCKNVEHLSFRSRRFGDDFAAALSKSLREMGSLKKLELTGGNITAEGLTNLVQASSQCLQLEELNLQDNRIRDLEVKRVLDLFSRMEKLKKIDLSNNNLSLNAVLILAKEVITCQNATELHVRKDTVIINFSGTSGEVPRSLDLRWEENKEYVIPTRHMKLCLRDRSLSLQHAKEIVSILQSCPHLSEVDLSGNKLGDEGCSCLLESLPWISISKQLDLSHNLLSINGVYSLLKSVNTCQKTMEVEVSLCHKTAVLRFTEDREFDSPPHREEPLYPTDDQQVGEERQTPTLSKKIRLTDCHFQASDLEKLCAVLKECSSISELDLSNNSLGDEGLSRLFQFLPNLKMLRSLRLDNNRISLKSVFCLAQSLSTLEHIKTMNLSLGHKQAVHLSFWERIRDRSTGRLRRNFLVHPEHIANGQCFRLRDCTMGPEDVTRLCQILAHCTQLTEIELSGNSLSDQSIERLLSFLPYLCHLTLLSIKNSIFSPRCTILFTNSISLCERIRKVEVRSNQNAFLHLGTSTQSQKTSFRLTDCAISQRQIEELCRVLEQHGRLSEVDLSRNQLGDESLRFLLDHLHRVHVTCSLNLSHNRISQDGVLHLINAFATSGNTTEVLVSLCSKATLIMKLTSRDDPRKILSLAECNFQPEHMEKLWLVLEKCTSLTEYISSDNNLSVHAAERLLHSLRKTPGPLKISIKEPWVCKKSVTNLLELAVQACGNITAIVICKDKSLFQLGIRFPCCLEKVESVVSRSNLHEPEIKRDCLYQRVLEKCIQLQELRWSHVELHDDDTKILVTVLLPLPKLKKFELTSCSIMPTGVDYLMSGLQKCQATEELNLGHMKLSDAAIPKLVLGLCKMPSLKRLILNHNSIGNDGCSRLAEALRNMHCMEEINLAHNKIGDPGLINLATVLLEMQNLKRINLSGNSPSPAGGEKLMEALGYCKHIEELLLSRNVFGDGAAVKLALCLPHVSSLKILHLQKNNIGPTGGTELARALAACGLLEEISLSENDLGEGSIHALSEGLPHLEHLRKIDLKLCGITDCSSKSLSCAFQQCPAMEEIILSWNSLGDGGAQELASALPGMEKLKMLDLEKNRIGAHGAVKLSEELVKCPEIQFIRLWDNPVPKGLAADLTSQDPRLCFSFY
SIO_010081: NLRC5
subclass of: SO_0000673
so part of: NLRC5
location: join(154144..154149,154611..154911,156201..156263,159461..159526,161123..162875,164706..164789,165119..165202,165283..165366,166374..166463,167316..167366,168316..168381,169435..169518,170435..170518,170921..171010,172041..172106,173106..173183,174399..174482,175559..175642,176847..176936,177063..177110,177544..177618,178672..178755,179733..179816,181357..181446,181556..181618,182463..182546,183023..183106,183666..183755,184452..184517,185142..185225,185309..185392,186009..186095,186723..186803,187375..187458,187855..187938,188610..188693,189338..189421,189514..189597,190299..190382,191363..191446,192900..192983,193982..194065,194996..195079,195233..195316,196518..196601,197729..197812,198920..199001)
location: region:154144-199001:1
so has part: feature:154144-154149:1:exon
so has part: feature:154611-154911:1:exon
so has part: feature:156201-156263:1:exon
so has part: feature:159461-159526:1:exon
so has part: feature:161123-162875:1:exon
so has part: feature:164706-164789:1:exon
so has part: feature:165119-165202:1:exon
so has part: feature:165283-165366:1:exon
so has part: feature:166374-166463:1:exon
so has part: feature:167316-167366:1:exon
so has part: feature:168316-168381:1:exon
so has part: feature:169435-169518:1:exon
so has part: feature:170435-170518:1:exon
so has part: feature:170921-171010:1:exon
so has part: feature:172041-172106:1:exon
so has part: feature:173106-173183:1:exon
so has part: feature:174399-174482:1:exon
so has part: feature:175559-175642:1:exon
so has part: feature:176847-176936:1:exon
so has part: feature:177063-177110:1:exon
so has part: feature:177544-177618:1:exon
so has part: feature:178672-178755:1:exon
so has part: feature:179733-179816:1:exon
so has part: feature:181357-181446:1:exon
so has part: feature:181556-181618:1:exon
so has part: feature:182463-182546:1:exon
so has part: feature:183023-183106:1:exon
so has part: feature:183666-183755:1:exon
so has part: feature:184452-184517:1:exon
so has part: feature:185142-185225:1:exon
so has part: feature:185309-185392:1:exon
so has part: feature:186009-186095:1:exon
so has part: feature:186723-186803:1:exon
so has part: feature:187375-187458:1:exon
so has part: feature:187855-187938:1:exon
so has part: feature:188610-188693:1:exon
so has part: feature:189338-189421:1:exon
so has part: feature:189514-189597:1:exon
so has part: feature:190299-190382:1:exon
so has part: feature:191363-191446:1:exon
so has part: feature:192900-192983:1:exon
so has part: feature:193982-194065:1:exon
so has part: feature:194996-195079:1:exon
so has part: feature:195233-195316:1:exon
so has part: feature:196518-196601:1:exon
so has part: feature:197729-197812:1:exon
so has part: feature:198920-199001:1:exon

XP_035192904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154144-154149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154611-154911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156201-156263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159461-159526:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161123-162875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164706-164789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165119-165202:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165283-165366:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166374-166463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167316-167366:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:168316-168381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:169435-169518:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:170435-170518:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:170921-171010:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:172041-172106:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:173106-173183:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:174399-174482:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:175559-175642:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176847-176936:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177063-177110:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177544-177618:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:178672-178755:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:179733-179816:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:181357-181446:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181556-181618:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:182463-182546:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:183023-183106:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:183666-183755:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:184452-184517:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:185142-185225:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:185309-185392:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:186009-186095:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:186723-186803:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:187375-187458:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:187855-187938:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:188610-188693:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:189338-189421:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:189514-189597:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:190299-190382:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:191363-191446:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:192900-192983:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:193982-194065:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:194996-195079:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:195233-195316:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:196518-196601:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:197729-197812:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:198920-199001:1:exon

CPNE2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CPNE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 203817..258935
location: region:203817-258935:1
so has part: feature:203817-258935:1:exon
subclass of: SO_0000010

118172840
type: Gene
SIO_000068: ncbigene

position:203817:1
position: 203817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258935:1
position: 258935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203817-258935:1:exon

CPNE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CPNE2
product: copine 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_035337026.1
SIO_010081: CPNE2
subclass of: SO_0000673
so part of: CPNE2
location: join(203817..203896,217535..217731,226072..226251,229572..229646,232176..232247,236584..236667,238562..238651,238990..239088,242519..242605,242875..242934,245159..245292,245824..245878,250984..251035,252015..252148,257392..257628,258338..258935)
location: region:203817-258935:1
so has part: feature:203817-203896:1:exon
so has part: feature:217535-217731:1:exon
so has part: feature:226072-226251:1:exon
so has part: feature:229572-229646:1:exon
so has part: feature:232176-232247:1:exon
so has part: feature:236584-236667:1:exon
so has part: feature:238562-238651:1:exon
so has part: feature:238990-239088:1:exon
so has part: feature:242519-242605:1:exon
so has part: feature:242875-242934:1:exon
so has part: feature:245159-245292:1:exon
so has part: feature:245824-245878:1:exon
so has part: feature:250984-251035:1:exon
so has part: feature:252015-252148:1:exon
so has part: feature:257392-257628:1:exon
so has part: feature:258338-258935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203817-203896:1:exon

position:203896:1
position: 203896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217535-217731:1:exon

position:217535:1
position: 217535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217731:1
position: 217731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:226072-226251:1:exon

position:226072:1
position: 226072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226251:1
position: 226251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:229572-229646:1:exon

position:229572:1
position: 229572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229646:1
position: 229646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:232176-232247:1:exon

position:232176:1
position: 232176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232247:1
position: 232247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:236584-236667:1:exon

position:236584:1
position: 236584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236667:1
position: 236667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:238562-238651:1:exon

position:238562:1
position: 238562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238651:1
position: 238651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:238990-239088:1:exon

position:238990:1
position: 238990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239088:1
position: 239088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:242519-242605:1:exon

position:242519:1
position: 242519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242605:1
position: 242605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:242875-242934:1:exon

position:242875:1
position: 242875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242934:1
position: 242934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:245159-245292:1:exon

position:245159:1
position: 245159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245292:1
position: 245292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:245824-245878:1:exon

position:245824:1
position: 245824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245878:1
position: 245878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:250984-251035:1:exon

position:250984:1
position: 250984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251035:1
position: 251035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:252015-252148:1:exon

position:252015:1
position: 252015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252148:1
position: 252148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:257392-257628:1:exon

position:257392:1
position: 257392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257628:1
position: 257628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:258338-258935:1:exon

position:258338:1
position: 258338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPNE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CPNE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-2
translation: MAYTGTPSPAGPIGSQYCVCKVELSVCGQNLLDRDVTSKSDPFCVLFMEVNGKWVELDRTETAVNNLNPAFSKKFIVDYHFEEVQKLKFALFDQDKSSMQLYEHDFLGEFSCTLGMIVSSKKITRTLLLGNGKPAGKGMITIAAQELSDNRVITLSMAGRKLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPFTVPLVSLCDGDVEKLIKVMCYDYDSDGGHDFIGEFQTSVARMCEAQDAFPLELECINPKKQKKKKNYKNSGIIIVKSCKITRDFSFLDYILGGCQLMFTVGIDFTASNGNPRDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVEGIVQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQEAASQYFILLIITDGVISDMDETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRVLRSYTGEEAVRDIVQFVPFRDFRNAPKETLAKAVLAELPQQVVQYFKHQNLPPINSEPA
SIO_010081: CPNE2
subclass of: SO_0000673
so part of: CPNE2
location: join(217564..217731,226072..226251,229572..229646,232176..232247,236584..236667,238562..238651,238990..239088,242519..242605,242875..242934,245159..245292,245824..245878,250984..251035,252015..252148,257392..257628,258338..258445)
location: region:217564-258445:1
so has part: feature:217564-217731:1:exon
so has part: feature:226072-226251:1:exon
so has part: feature:229572-229646:1:exon
so has part: feature:232176-232247:1:exon
so has part: feature:236584-236667:1:exon
so has part: feature:238562-238651:1:exon
so has part: feature:238990-239088:1:exon
so has part: feature:242519-242605:1:exon
so has part: feature:242875-242934:1:exon
so has part: feature:245159-245292:1:exon
so has part: feature:245824-245878:1:exon
so has part: feature:250984-251035:1:exon
so has part: feature:252015-252148:1:exon
so has part: feature:257392-257628:1:exon
so has part: feature:258338-258445:1:exon

XP_035192917.1
type: Protein
SIO_000068: ncbiprotein

position:217564:1
position: 217564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258445:1
position: 258445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217564-217731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226072-226251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229572-229646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232176-232247:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236584-236667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238562-238651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:238990-239088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242519-242605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242875-242934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:245159-245292:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245824-245878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250984-251035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:252015-252148:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:257392-257628:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258338-258445:1:exon

PSME3IP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PSME3IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(262208..277268)
location: region:262208-277268:-1
so has part: feature:262208-277268:-1:exon
subclass of: SO_0000010

118172846
type: Gene
SIO_000068: ncbigene

position:262208:-1
position: 262208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277268:-1
position: 277268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262208-277268:-1:exon

PSME3IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSME3IP1
product: proteasome activator subunit 3 interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_035337033.1
SIO_010081: PSME3IP1
subclass of: SO_0000673
so part of: PSME3IP1
location: complement(join(262208..262975,264120..264184,266190..266323,270346..270467,273887..273985,274166..274311,277195..277268))
location: region:262208-277268:-1
so has part: feature:277195-277268:-1:exon
so has part: feature:274166-274311:-1:exon
so has part: feature:273887-273985:-1:exon
so has part: feature:270346-270467:-1:exon
so has part: feature:266190-266323:-1:exon
so has part: feature:264120-264184:-1:exon
so has part: feature:262208-262975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277195-277268:-1:exon

position:277195:-1
position: 277195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274166-274311:-1:exon

position:274166:-1
position: 274166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274311:-1
position: 274311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273887-273985:-1:exon

position:273887:-1
position: 273887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273985:-1
position: 273985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270346-270467:-1:exon

position:270346:-1
position: 270346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270467:-1
position: 270467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:266190-266323:-1:exon

position:266190:-1
position: 266190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266323:-1
position: 266323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:264120-264184:-1:exon

position:264120:-1
position: 264120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264184:-1
position: 264184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:262208-262975:-1:exon

position:262975:-1
position: 262975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSME3IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSME3IP1
product: proteasome activator subunit 3 interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035337036.1
SIO_010081: PSME3IP1
subclass of: SO_0000673
so part of: PSME3IP1
location: complement(join(262208..262975,264120..264184,266190..266323,270346..270467,273887..273985,274166..274306,277195..277215))
location: region:262208-277215:-1
so has part: feature:277195-277215:-1:exon
so has part: feature:274166-274306:-1:exon
so has part: feature:273887-273985:-1:exon
so has part: feature:270346-270467:-1:exon
so has part: feature:266190-266323:-1:exon
so has part: feature:264120-264184:-1:exon
so has part: feature:262208-262975:-1:exon

position:277215:-1
position: 277215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277195-277215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274166-274306:-1:exon

position:274306:-1
position: 274306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273887-273985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270346-270467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266190-266323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264120-264184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262208-262975:-1:exon

PSME3IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSME3IP1
product: proteasome activator subunit 3 interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035337035.1
SIO_010081: PSME3IP1
subclass of: SO_0000673
so part of: PSME3IP1
location: complement(join(262208..262975,264120..264184,266190..266323,270346..270467,273887..273985,274166..274311,277139..277179))
location: region:262208-277179:-1
so has part: feature:277139-277179:-1:exon
so has part: feature:274166-274311:-1:exon
so has part: feature:273887-273985:-1:exon
so has part: feature:270346-270467:-1:exon
so has part: feature:266190-266323:-1:exon
so has part: feature:264120-264184:-1:exon
so has part: feature:262208-262975:-1:exon

position:277179:-1
position: 277179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277139-277179:-1:exon

position:277139:-1
position: 277139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274166-274311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273887-273985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270346-270467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266190-266323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264120-264184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262208-262975:-1:exon

PSME3IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSME3IP1
product: proteasome activator subunit 3 interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_035337034.1
SIO_010081: PSME3IP1
subclass of: SO_0000673
so part of: PSME3IP1
location: complement(join(262208..262975,264120..264184,266190..266323,270346..270467,273887..273985,274166..274311,275322..275414))
location: region:262208-275414:-1
so has part: feature:275322-275414:-1:exon
so has part: feature:274166-274311:-1:exon
so has part: feature:273887-273985:-1:exon
so has part: feature:270346-270467:-1:exon
so has part: feature:266190-266323:-1:exon
so has part: feature:264120-264184:-1:exon
so has part: feature:262208-262975:-1:exon

position:275414:-1
position: 275414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275322-275414:-1:exon

position:275322:-1
position: 275322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274166-274311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273887-273985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270346-270467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266190-266323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264120-264184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262208-262975:-1:exon

PSME3IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSME3IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PSME3-interacting protein
translation: MDGGDGTADLVINKRFVSEAELEERRKRRQEEWEKVRKPEDPEECPEEAYDPRSLYERLQEQREKKQQEFEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEEMKELNEYRSTLTKVGVSMDPKKEAEKKLPMKSVENKNKFSQAKLLAGAVKHRSSDGGNSVKRLKLDTDHEEKNQEKPSCVPLGSSSVGGSTVHCPSAAVCIGILPGLGAYSGSSDSESSSDSEGTINSTGKIVSSVFRSNSFFDGP
SIO_010081: PSME3IP1
subclass of: SO_0000673
so part of: PSME3IP1
location: complement(join(262758..262975,264120..264184,266190..266323,270346..270467,273887..273985,274166..274295))
location: region:262758-274295:-1
so has part: feature:274166-274295:-1:exon
so has part: feature:273887-273985:-1:exon
so has part: feature:270346-270467:-1:exon
so has part: feature:266190-266323:-1:exon
so has part: feature:264120-264184:-1:exon
so has part: feature:262758-262975:-1:exon

XP_035192924.1
type: Protein
SIO_000068: ncbiprotein

position:262758:-1
position: 262758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274295:-1
position: 274295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274166-274295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273887-273985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270346-270467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266190-266323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264120-264184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262758-262975:-1:exon

PSME3IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSME3IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PSME3-interacting protein
translation: MDGGDGTADLVINKRFVSEAELEERRKRRQEEWEKVRKPEDPEECPEEAYDPRSLYERLQEQREKKQQEFEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEEMKELNEYRSTLTKVGVSMDPKKEAEKKLPMKSVENKNKFSQAKLLAGAVKHRSSDGGNSVKRLKLDTDHEEKNQEKPSCVPLGSSSVGGSTVHCPSAAVCIGILPGLGAYSGSSDSESSSDSEGTINSTGKIVSSVFRSNSFFDGP
SIO_010081: PSME3IP1
subclass of: SO_0000673
so part of: PSME3IP1
location: complement(join(262758..262975,264120..264184,266190..266323,270346..270467,273887..273985,274166..274295))
location: region:262758-274295:-1
so has part: feature:274166-274295:-1:exon
so has part: feature:273887-273985:-1:exon
so has part: feature:270346-270467:-1:exon
so has part: feature:266190-266323:-1:exon
so has part: feature:264120-264184:-1:exon
so has part: feature:262758-262975:-1:exon

XP_035192925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274166-274295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273887-273985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270346-270467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266190-266323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264120-264184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262758-262975:-1:exon

PSME3IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSME3IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PSME3-interacting protein
translation: MDGGDGTADLVINKRFVSEAELEERRKRRQEEWEKVRKPEDPEECPEEAYDPRSLYERLQEQREKKQQEFEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEEMKELNEYRSTLTKVGVSMDPKKEAEKKLPMKSVENKNKFSQAKLLAGAVKHRSSDGGNSVKRLKLDTDHEEKNQEKPSCVPLGSSSVGGSTVHCPSAAVCIGILPGLGAYSGSSDSESSSDSEGTINSTGKIVSSVFRSNSFFDGP
SIO_010081: PSME3IP1
subclass of: SO_0000673
so part of: PSME3IP1
location: complement(join(262758..262975,264120..264184,266190..266323,270346..270467,273887..273985,274166..274295))
location: region:262758-274295:-1
so has part: feature:274166-274295:-1:exon
so has part: feature:273887-273985:-1:exon
so has part: feature:270346-270467:-1:exon
so has part: feature:266190-266323:-1:exon
so has part: feature:264120-264184:-1:exon
so has part: feature:262758-262975:-1:exon

XP_035192926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274166-274295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273887-273985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270346-270467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266190-266323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264120-264184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262758-262975:-1:exon

PSME3IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSME3IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PSME3-interacting protein
translation: MDGGDGTADLVINKRFVSEAELEERRKRRQEEWEKVRKPEDPEECPEEAYDPRSLYERLQEQREKKQQEFEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEEMKELNEYRSTLTKVGVSMDPKKEAEKKLPMKSVENKNKFSQAKLLAGAVKHRSSDGGNSVKRLKLDTDHEEKNQEKPSCVPLGSSSVGGSTVHCPSAAVCIGILPGLGAYSGSSDSESSSDSEGTINSTGKIVSSVFRSNSFFDGP
SIO_010081: PSME3IP1
subclass of: SO_0000673
so part of: PSME3IP1
location: complement(join(262758..262975,264120..264184,266190..266323,270346..270467,273887..273985,274166..274295))
location: region:262758-274295:-1
so has part: feature:274166-274295:-1:exon
so has part: feature:273887-273985:-1:exon
so has part: feature:270346-270467:-1:exon
so has part: feature:266190-266323:-1:exon
so has part: feature:264120-264184:-1:exon
so has part: feature:262758-262975:-1:exon

XP_035192927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274166-274295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273887-273985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270346-270467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266190-266323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264120-264184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262758-262975:-1:exon

RSPRY1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: RSPRY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 277568..316048
location: region:277568-316048:1
so has part: feature:277568-316048:1:exon
subclass of: SO_0000010

118172838
type: Gene
SIO_000068: ncbigene

position:277568:1
position: 277568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316048:1
position: 316048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277568-316048:1:exon

RSPRY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RSPRY1
product: ring finger and SPRY domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035337023.1
SIO_010081: RSPRY1
subclass of: SO_0000673
so part of: RSPRY1
location: join(277568..277617,288600..288785,290965..291458,295297..295349,296789..296901,297748..297874,299261..299319,303068..303134,303785..303916,305285..305400,305971..306114,308499..308610,309583..309685,311187..311339,313720..313824,314758..316048)
location: region:277568-316048:1
so has part: feature:277568-277617:1:exon
so has part: feature:288600-288785:1:exon
so has part: feature:290965-291458:1:exon
so has part: feature:295297-295349:1:exon
so has part: feature:296789-296901:1:exon
so has part: feature:297748-297874:1:exon
so has part: feature:299261-299319:1:exon
so has part: feature:303068-303134:1:exon
so has part: feature:303785-303916:1:exon
so has part: feature:305285-305400:1:exon
so has part: feature:305971-306114:1:exon
so has part: feature:308499-308610:1:exon
so has part: feature:309583-309685:1:exon
so has part: feature:311187-311339:1:exon
so has part: feature:313720-313824:1:exon
so has part: feature:314758-316048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277568-277617:1:exon

position:277617:1
position: 277617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288600-288785:1:exon

position:288600:1
position: 288600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288785:1
position: 288785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290965-291458:1:exon

position:290965:1
position: 290965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291458:1
position: 291458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:295297-295349:1:exon

position:295297:1
position: 295297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295349:1
position: 295349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296789-296901:1:exon

position:296789:1
position: 296789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296901:1
position: 296901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297748-297874:1:exon

position:297748:1
position: 297748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297874:1
position: 297874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:299261-299319:1:exon

position:299261:1
position: 299261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299319:1
position: 299319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:303068-303134:1:exon

position:303068:1
position: 303068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303134:1
position: 303134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:303785-303916:1:exon

position:303785:1
position: 303785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303916:1
position: 303916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:305285-305400:1:exon

position:305285:1
position: 305285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305400:1
position: 305400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:305971-306114:1:exon

position:305971:1
position: 305971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306114:1
position: 306114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:308499-308610:1:exon

position:308499:1
position: 308499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308610:1
position: 308610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:309583-309685:1:exon

position:309583:1
position: 309583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309685:1
position: 309685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:311187-311339:1:exon

position:311187:1
position: 311187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311339:1
position: 311339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:313720-313824:1:exon

position:313720:1
position: 313720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313824:1
position: 313824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:314758-316048:1:exon

position:314758:1
position: 314758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSPRY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RSPRY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger and SPRY domain-containing protein 1
translation: MIVVAFLVFYASRSLFQGLLLTLERHVPRLLGALGACNMGNSCVCRDDSGAEDNVESQNRQTESSRVRVPEARSHPRDPVRPPRRGRGPHEPRRKKQNVDGLVLDTLAVIRTLVDNDQEPPYSMITLHEMAETDEGWLEVVQSLIRVIPLEDPLGPAVITLLLDECPLPTKDALQKLTEILNLSGAAACQDACHPAKHRNTTAVLGCLAEKLAGPASIGLLSPGILEYLLHSLNFQSHPTVMLFALIALEKFAQTSENKMTVSESCISDQLILLEKWTDNPDYLKRQVGFCAQWSLDNLFLKEGRQFTYEKVDLTNIRAMLNSNDVSEYLKISPHGLEARCDASSFESVRCTFCVDSGVWYYEVTVITSGVMQIGWATKDSKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARSKPHSHPCWKEGDTIGFLLDLQEKQMIFYLNGNQLPAEKQVFSSAISGFFAAASFMSYQQCEFNFGAKPFKYPPSMKFSTFNDYAFLTAEEKIILPRHRRLALLKQVSIRENCCTLCCDEVADTELRPCGHSDLCMECALQLETCPLCRQEIQTRVRQISHIS
SIO_010081: RSPRY1
subclass of: SO_0000673
so part of: RSPRY1
location: join(291112..291458,295297..295349,296789..296901,297748..297874,299261..299319,303068..303134,303785..303916,305285..305400,305971..306114,308499..308610,309583..309685,311187..311339,313720..313824,314758..314854)
location: region:291112-314854:1
so has part: feature:291112-291458:1:exon
so has part: feature:295297-295349:1:exon
so has part: feature:296789-296901:1:exon
so has part: feature:297748-297874:1:exon
so has part: feature:299261-299319:1:exon
so has part: feature:303068-303134:1:exon
so has part: feature:303785-303916:1:exon
so has part: feature:305285-305400:1:exon
so has part: feature:305971-306114:1:exon
so has part: feature:308499-308610:1:exon
so has part: feature:309583-309685:1:exon
so has part: feature:311187-311339:1:exon
so has part: feature:313720-313824:1:exon
so has part: feature:314758-314854:1:exon

XP_035192914.1
type: Protein
SIO_000068: ncbiprotein

position:291112:1
position: 291112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314854:1
position: 314854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291112-291458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295297-295349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296789-296901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297748-297874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299261-299319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303068-303134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303785-303916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305285-305400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305971-306114:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308499-308610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309583-309685:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311187-311339:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:313720-313824:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:314758-314854:1:exon

LOC118172855
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(301383..312879)
location: region:301383-312879:-1
so has part: feature:301383-312879:-1:exon
subclass of: SO_0000011

118172855
type: Gene
SIO_000068: ncbigene

position:301383:-1
position: 301383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312879:-1
position: 312879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301383-312879:-1:exon

LOC118172855
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118172855
product: uncharacterized LOC118172855
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004753883.1
SIO_010081: LOC118172855
subclass of: SO_0000673
so part of: LOC118172855
location: complement(join(301383..301516,311622..311627,312869..312879))
location: region:301383-312879:-1
so has part: feature:312869-312879:-1:exon
so has part: feature:311622-311627:-1:exon
so has part: feature:301383-301516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312869-312879:-1:exon

position:312869:-1
position: 312869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311622-311627:-1:exon

position:311622:-1
position: 311622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311627:-1
position: 311627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301383-301516:-1:exon

position:301516:-1
position: 301516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL2BP
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ARL2BP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 317618..324741
location: region:317618-324741:1
so has part: feature:317618-324741:1:exon
subclass of: SO_0000010

118172851
type: Gene
SIO_000068: ncbigene

position:317618:1
position: 317618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324741:1
position: 324741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317618-324741:1:exon

ARL2BP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ARL2BP
product: ADP ribosylation factor like GTPase 2 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_035337041.1
SIO_010081: ARL2BP
subclass of: SO_0000673
so part of: ARL2BP
location: join(317618..317849,317937..318061,320153..320214,321475..321581,321956..322041,322917..323013,324215..324741)
location: region:317618-324741:1
so has part: feature:317618-317849:1:exon
so has part: feature:317937-318061:1:exon
so has part: feature:320153-320214:1:exon
so has part: feature:321475-321581:1:exon
so has part: feature:321956-322041:1:exon
so has part: feature:322917-323013:1:exon
so has part: feature:324215-324741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317618-317849:1:exon

position:317849:1
position: 317849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:317937-318061:1:exon

position:317937:1
position: 317937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318061:1
position: 318061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:320153-320214:1:exon

position:320153:1
position: 320153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320214:1
position: 320214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321475-321581:1:exon

position:321475:1
position: 321475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321581:1
position: 321581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:321956-322041:1:exon

position:321956:1
position: 321956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322041:1
position: 322041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322917-323013:1:exon

position:322917:1
position: 322917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323013:1
position: 323013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:324215-324741:1:exon

position:324215:1
position: 324215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARL2BP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ARL2BP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 2-binding protein
translation: MMEASDEENFGVAISSPSDAEFDAVVGYLEDIIMDDDFQLIQRTFMEKHYQEFDDSEENKLIYTSIFNEYISLIEKYIEEKLLDRIPGFSMTAFTMSLQQHKDEMAGDIFDMLLTFTDFLAFKEMFLDYRAEKEGRSLDLSSGLVVTSLNKSSISSS
SIO_010081: ARL2BP
subclass of: SO_0000673
so part of: ARL2BP
location: join(318021..318061,320153..320214,321475..321581,321956..322041,322917..323013,324215..324295)
location: region:318021-324295:1
so has part: feature:318021-318061:1:exon
so has part: feature:320153-320214:1:exon
so has part: feature:321475-321581:1:exon
so has part: feature:321956-322041:1:exon
so has part: feature:322917-323013:1:exon
so has part: feature:324215-324295:1:exon

XP_035192932.1
type: Protein
SIO_000068: ncbiprotein

position:318021:1
position: 318021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324295:1
position: 324295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318021-318061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320153-320214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321475-321581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321956-322041:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322917-323013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324215-324295:1:exon

PLLP
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PLLP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326559..332096)
location: region:326559-332096:-1
so has part: feature:326559-332096:-1:exon
subclass of: SO_0000010

118172849
type: Gene
SIO_000068: ncbigene

position:326559:-1
position: 326559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332096:-1
position: 332096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326559-332096:-1:exon

PLLP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PLLP
product: plasmolipin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_035337040.1
SIO_010081: PLLP
subclass of: SO_0000673
so part of: PLLP
location: complement(join(326559..328429,328505..328624,328815..328988,331872..332096))
location: region:326559-332096:-1
so has part: feature:331872-332096:-1:exon
so has part: feature:328815-328988:-1:exon
so has part: feature:328505-328624:-1:exon
so has part: feature:326559-328429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331872-332096:-1:exon

position:331872:-1
position: 331872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328815-328988:-1:exon

position:328815:-1
position: 328815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328988:-1
position: 328988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328505-328624:-1:exon

position:328505:-1
position: 328505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328624:-1
position: 328624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326559-328429:-1:exon

position:328429:-1
position: 328429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLLP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PLLP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasmolipin
translation: MAGLPGAVRTRSGSPGASAALPAPRLAALDGAFLCSPLGGLMGAQAVLGLLVWALIADTTYHLHAAYGWVMFVSIFFWVATVLLFVTYLLQLPLKFYVIPWPLVLVIFNAAATILYITAFITCSAAVQPTSWRQWDYNRRAAASFFAGLVMLTYGVSTFLSFRAWKGLGSNAATSQVTNRA
SIO_010081: PLLP
subclass of: SO_0000673
so part of: PLLP
location: complement(join(328316..328429,328505..328624,328815..328988,331872..332009))
location: region:328316-332009:-1
so has part: feature:331872-332009:-1:exon
so has part: feature:328815-328988:-1:exon
so has part: feature:328505-328624:-1:exon
so has part: feature:328316-328429:-1:exon

XP_035192931.1
type: Protein
SIO_000068: ncbiprotein

position:328316:-1
position: 328316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332009:-1
position: 332009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331872-332009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328815-328988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328505-328624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328316-328429:-1:exon

TRNAL-CAG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAL-CAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 332770..332852
location: region:332770-332852:1
so has part: feature:332770-332852:1:exon
subclass of: SO_0000663

118173013
type: Gene
SIO_000068: ncbigene

position:332770:1
position: 332770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332852:1
position: 332852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332770-332852:1:exon

TRNAL-CAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAL-CAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:332804..332806,aa:Leu,seq:cag)
SIO_010081: TRNAL-CAG
subclass of: SO_0000673
so part of: TRNAL-CAG
location: 332770..332852
location: region:332770-332852:1
so has part: feature:332770-332852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332770-332852:1:exon

TRNAL-CAG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAL-CAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(332988..333070)
location: region:332988-333070:-1
so has part: feature:332988-333070:-1:exon
subclass of: SO_0000663

118173017
type: Gene
SIO_000068: ncbigene

position:332988:-1
position: 332988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333070:-1
position: 333070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332988-333070:-1:exon

TRNAL-CAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAL-CAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(333034..333036),aa:Leu,seq:cag)
SIO_010081: TRNAL-CAG
subclass of: SO_0000673
so part of: TRNAL-CAG
location: complement(332988..333070)
location: region:332988-333070:-1
so has part: feature:332988-333070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332988-333070:-1:exon

CX3CL1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CX3CL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 343795..351845
location: region:343795-351845:1
so has part: feature:343795-351845:1:exon
subclass of: SO_0000010

118172841
type: Gene
SIO_000068: ncbigene

position:343795:1
position: 343795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351845:1
position: 351845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343795-351845:1:exon

CX3CL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CX3CL1
product: C-X3-C motif chemokine ligand 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_035337027.1
SIO_010081: CX3CL1
subclass of: SO_0000673
so part of: CX3CL1
location: join(343795..343979,347137..347257,348151..351845)
location: region:343795-351845:1
so has part: feature:343795-343979:1:exon
so has part: feature:347137-347257:1:exon
so has part: feature:348151-351845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343795-343979:1:exon

position:343979:1
position: 343979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347137-347257:1:exon

position:347137:1
position: 347137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347257:1
position: 347257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348151-351845:1:exon

position:348151:1
position: 348151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CX3CL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CX3CL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fractalkine
translation: MSCSSCIAPEDAVGSQEQKLLPLRTLPAADHGNMKVVSFQILFVLRVLCLVTPAGGQPKAPLKCSKVCNRFTSIIPEKRIKSYYKTDPRCAKQAIIFITRASLEMCADPDAKWVKDIVWKLDQKKASAALPLPHAATSAAVPEKPGIFHKRIGLTVTAPSQATAATTLFQGTGTTILERTHAPAAMTEVTSKSTPAMQSTTQFSAGSSPVIWEIATHSEVSSEANRDSLKSAHSTTSAAGMVSSQPILYPTALVHGFDSTVGFTEEPVGYSASATADVQDTSSPSSNSDPVPITKGLDHAALSTDESLVPTSARANTSDTASRSLNSDLPSILNSMEIGSAPATPVPPETTSVSTVNPTTAIDKGPPVHTNKIFSSSADAVGTRTFDYSSPLGKQDLPDALVFTSQTFSGQARAQVTTKRPHDPPSLSFLPRSQAHFIIPVSLVGGLIACSVAAVWLYTKFGVRTETMSREMVQGLLYQKEGHQNNVYPMEII
SIO_010081: CX3CL1
subclass of: SO_0000673
so part of: CX3CL1
location: join(343814..343979,347137..347257,348151..349345)
location: region:343814-349345:1
so has part: feature:343814-343979:1:exon
so has part: feature:347137-347257:1:exon
so has part: feature:348151-349345:1:exon

XP_035192918.1
type: Protein
SIO_000068: ncbiprotein

position:343814:1
position: 343814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349345:1
position: 349345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343814-343979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347137-347257:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348151-349345:1:exon

LOC118172852
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 358882..360263
location: region:358882-360263:1
so has part: feature:358882-360263:1:exon
subclass of: SO_0000010

118172852
type: Gene
SIO_000068: ncbigene

position:358882:1
position: 358882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360263:1
position: 360263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358882-360263:1:exon

LOC118172852
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172852
product: C-C motif chemokine 14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_035337042.1
SIO_010081: LOC118172852
subclass of: SO_0000673
so part of: LOC118172852
location: join(358882..359079,359481..359592,359936..360263)
location: region:358882-360263:1
so has part: feature:358882-359079:1:exon
so has part: feature:359481-359592:1:exon
so has part: feature:359936-360263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358882-359079:1:exon

position:359079:1
position: 359079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359481-359592:1:exon

position:359481:1
position: 359481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359592:1
position: 359592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359936-360263:1:exon

position:359936:1
position: 359936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118172852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 14-like
translation: MLSTRPVLLLLLLLTFSQHCATVLYTPSECCFDYIKLRVRSDVLMSFYKTPKECFYPGIVFETRNGTKICANPKARWVEKAIEKLLKRKSSDAS
SIO_010081: LOC118172852
subclass of: SO_0000673
so part of: LOC118172852
location: join(359013..359079,359481..359592,359936..360041)
location: region:359013-360041:1
so has part: feature:359013-359079:1:exon
so has part: feature:359481-359592:1:exon
so has part: feature:359936-360041:1:exon

XP_035192933.1
type: Protein
SIO_000068: ncbiprotein

position:359013:1
position: 359013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360041:1
position: 360041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359013-359079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359481-359592:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359936-360041:1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAH-GUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 362522..362593
location: region:362522-362593:1
so has part: feature:362522-362593:1:exon
subclass of: SO_0000663

118173023
type: Gene
SIO_000068: ncbigene

position:362522:1
position: 362522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362593:1
position: 362593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362522-362593:1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:362555..362557,aa:His,seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: 362522..362593
location: region:362522-362593:1
so has part: feature:362522-362593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362522-362593:1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAH-GUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 363581..363652
location: region:363581-363652:1
so has part: feature:363581-363652:1:exon
subclass of: SO_0000663

118173024
type: Gene
SIO_000068: ncbigene

position:363581:1
position: 363581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363652:1
position: 363652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363581-363652:1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:363614..363616,aa:His,seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: 363581..363652
location: region:363581-363652:1
so has part: feature:363581-363652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363581-363652:1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAH-GUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 364815..364886
location: region:364815-364886:1
so has part: feature:364815-364886:1:exon
subclass of: SO_0000663

118173025
type: Gene
SIO_000068: ncbigene

position:364815:1
position: 364815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364886:1
position: 364886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364815-364886:1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:364848..364850,aa:His,seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: 364815..364886
location: region:364815-364886:1
so has part: feature:364815-364886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364815-364886:1:exon

LOC118172854
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 367513..370171
location: region:367513-370171:1
so has part: feature:367513-370171:1:exon
subclass of: SO_0000011

118172854
type: Gene
SIO_000068: ncbigene

position:367513:1
position: 367513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370171:1
position: 370171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367513-370171:1:exon

LOC118172854
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118172854
product: uncharacterized LOC118172854
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004753882.1
SIO_010081: LOC118172854
subclass of: SO_0000673
so part of: LOC118172854
location: join(367513..368577,369472..369583,369826..370171)
location: region:367513-370171:1
so has part: feature:367513-368577:1:exon
so has part: feature:369472-369583:1:exon
so has part: feature:369826-370171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367513-368577:1:exon

position:368577:1
position: 368577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369472-369583:1:exon

position:369472:1
position: 369472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369583:1
position: 369583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:369826-370171:1:exon

position:369826:1
position: 369826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RANBP10
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: RANBP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(378548..448116)
location: region:378548-448116:-1
so has part: feature:378548-448116:-1:exon
subclass of: SO_0000010

118172835
type: Gene
SIO_000068: ncbigene

position:378548:-1
position: 378548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448116:-1
position: 448116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378548-448116:-1:exon

RANBP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RANBP10
product: RAN binding protein 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_035337017.1
SIO_010081: RANBP10
subclass of: SO_0000673
so part of: RANBP10
location: complement(join(378548..379236,381184..381295,381787..381929,382218..382342,383601..383796,384675..384823,386135..386243,388926..389038,391321..391505,397047..397069,404542..404709,425564..425616,447005..447116,447867..448116))
location: region:378548-448116:-1
so has part: feature:447867-448116:-1:exon
so has part: feature:447005-447116:-1:exon
so has part: feature:425564-425616:-1:exon
so has part: feature:404542-404709:-1:exon
so has part: feature:397047-397069:-1:exon
so has part: feature:391321-391505:-1:exon
so has part: feature:388926-389038:-1:exon
so has part: feature:386135-386243:-1:exon
so has part: feature:384675-384823:-1:exon
so has part: feature:383601-383796:-1:exon
so has part: feature:382218-382342:-1:exon
so has part: feature:381787-381929:-1:exon
so has part: feature:381184-381295:-1:exon
so has part: feature:378548-379236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447867-448116:-1:exon

position:447867:-1
position: 447867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447005-447116:-1:exon

position:447005:-1
position: 447005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447116:-1
position: 447116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425564-425616:-1:exon

position:425564:-1
position: 425564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425616:-1
position: 425616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:404542-404709:-1:exon

position:404542:-1
position: 404542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404709:-1
position: 404709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:397047-397069:-1:exon

position:397047:-1
position: 397047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397069:-1
position: 397069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:391321-391505:-1:exon

position:391321:-1
position: 391321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391505:-1
position: 391505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:388926-389038:-1:exon

position:388926:-1
position: 388926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389038:-1
position: 389038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:386135-386243:-1:exon

position:386135:-1
position: 386135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386243:-1
position: 386243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:384675-384823:-1:exon

position:384675:-1
position: 384675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384823:-1
position: 384823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:383601-383796:-1:exon

position:383601:-1
position: 383601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383796:-1
position: 383796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:382218-382342:-1:exon

position:382218:-1
position: 382218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382342:-1
position: 382342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:381787-381929:-1:exon

position:381787:-1
position: 381787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381929:-1
position: 381929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:381184-381295:-1:exon

position:381184:-1
position: 381184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381295:-1
position: 381295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:378548-379236:-1:exon

position:379236:-1
position: 379236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RANBP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RANBP10
product: RAN binding protein 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035337016.1
SIO_010081: RANBP10
subclass of: SO_0000673
so part of: RANBP10
location: complement(join(378548..379236,381184..381295,381787..381932,382218..382342,383601..383796,384675..384823,386135..386243,388926..389038,391321..391505,397047..397069,404542..404709,425564..425616,447005..447116,447867..448114))
location: region:378548-448114:-1
so has part: feature:447867-448114:-1:exon
so has part: feature:447005-447116:-1:exon
so has part: feature:425564-425616:-1:exon
so has part: feature:404542-404709:-1:exon
so has part: feature:397047-397069:-1:exon
so has part: feature:391321-391505:-1:exon
so has part: feature:388926-389038:-1:exon
so has part: feature:386135-386243:-1:exon
so has part: feature:384675-384823:-1:exon
so has part: feature:383601-383796:-1:exon
so has part: feature:382218-382342:-1:exon
so has part: feature:381787-381932:-1:exon
so has part: feature:381184-381295:-1:exon
so has part: feature:378548-379236:-1:exon

position:448114:-1
position: 448114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447867-448114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447005-447116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425564-425616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404542-404709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397047-397069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391321-391505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388926-389038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386135-386243:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384675-384823:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383601-383796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:382218-382342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381787-381932:-1:exon

position:381932:-1
position: 381932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:381184-381295:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:378548-379236:-1:exon

RANBP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RANBP10
product: RAN binding protein 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_035337018.1
SIO_010081: RANBP10
subclass of: SO_0000673
so part of: RANBP10
location: complement(join(378548..379236,381184..381295,381787..381932,382218..382342,383601..383796,384675..384823,386135..386243,388926..389038,391321..391505,397047..397069,404542..404709,425564..425616,435152..435172))
location: region:378548-435172:-1
so has part: feature:435152-435172:-1:exon
so has part: feature:425564-425616:-1:exon
so has part: feature:404542-404709:-1:exon
so has part: feature:397047-397069:-1:exon
so has part: feature:391321-391505:-1:exon
so has part: feature:388926-389038:-1:exon
so has part: feature:386135-386243:-1:exon
so has part: feature:384675-384823:-1:exon
so has part: feature:383601-383796:-1:exon
so has part: feature:382218-382342:-1:exon
so has part: feature:381787-381932:-1:exon
so has part: feature:381184-381295:-1:exon
so has part: feature:378548-379236:-1:exon

position:435172:-1
position: 435172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435152-435172:-1:exon

position:435152:-1
position: 435152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425564-425616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:404542-404709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397047-397069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391321-391505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388926-389038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386135-386243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384675-384823:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:383601-383796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:382218-382342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381787-381932:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381184-381295:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:378548-379236:-1:exon

RANBP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RANBP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 10 isoform X2
translation: MAEAGAGSLHGGDTAAAPGPAEEQELSRRLRRLYPAVNQDETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPSNLYPTVGLQTPGEIVDANFGQQPFVFDIEDYMREWRAKIQSTIKRFPIGDRLGEWQAMLQNMVSSYLVHHGYCSTATAFARVTDTTIQEEQTSIKNRQRIQKLVLAGRVGEAIEATQQLYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRCFSARSPRSQDSYPGSPSLSPRHGSNNSHVHSTGADSPTCSNGVMSTKSKQSHSKYPTLSSSSSSSSSSSPSSVNYSESNSTDSTKSQQHSSTSNQETSDSEMEMEAEHYPNGVLENSSTRIMNGTYKHEEILQTDESSMDSCSQRQLCGGNHAATERMIQFGRELQMLSEQLCREYGKNTMHKKMLQDAFSLLAYSDPWNCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARVGLGSCSFARVDDYLH
SIO_010081: RANBP10
subclass of: SO_0000673
so part of: RANBP10
location: complement(join(379106..379236,381184..381295,381787..381929,382218..382342,383601..383796,384675..384823,386135..386243,388926..389038,391321..391505,397047..397069,404542..404709,425564..425616,447005..447116,447867..448074))
location: region:379106-448074:-1
so has part: feature:447867-448074:-1:exon
so has part: feature:447005-447116:-1:exon
so has part: feature:425564-425616:-1:exon
so has part: feature:404542-404709:-1:exon
so has part: feature:397047-397069:-1:exon
so has part: feature:391321-391505:-1:exon
so has part: feature:388926-389038:-1:exon
so has part: feature:386135-386243:-1:exon
so has part: feature:384675-384823:-1:exon
so has part: feature:383601-383796:-1:exon
so has part: feature:382218-382342:-1:exon
so has part: feature:381787-381929:-1:exon
so has part: feature:381184-381295:-1:exon
so has part: feature:379106-379236:-1:exon

XP_035192908.1
type: Protein
SIO_000068: ncbiprotein

position:379106:-1
position: 379106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448074:-1
position: 448074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447867-448074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447005-447116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425564-425616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404542-404709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397047-397069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391321-391505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388926-389038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386135-386243:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384675-384823:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383601-383796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:382218-382342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381787-381929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381184-381295:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379106-379236:-1:exon

RANBP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RANBP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 10 isoform X1
translation: MAEAGAGSLHGGDTAAAPGPAEEQELSRRLRRLYPAVNQDETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPSNLYPTVGLQTPGEIVDANFGQQPFVFDIEDYMREWRAKIQSTIKRFPIGDRLGEWQAMLQNMVSSYLVHHGYCSTATAFARVTDTTIQEEQTSIKNRQRIQKLVLAGRVGEAIEATQQLYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRCFSARSPRSQDSYPGSPSLSPRHGSNNSHVHSTGADSPTCSNGVMSTKSKQSHSKYPTLSSSSSSSSSSSPSSVNYSESNSTDSTKSQQHSSTSNQETSDSEMEMEAEHYPNGVLENSSTRIMNGTYKHEEILQTDESSMEDSCSQRQLCGGNHAATERMIQFGRELQMLSEQLCREYGKNTMHKKMLQDAFSLLAYSDPWNCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARVGLGSCSFARVDDYLH
SIO_010081: RANBP10
subclass of: SO_0000673
so part of: RANBP10
location: complement(join(379106..379236,381184..381295,381787..381932,382218..382342,383601..383796,384675..384823,386135..386243,388926..389038,391321..391505,397047..397069,404542..404709,425564..425616,447005..447116,447867..448074))
location: region:379106-448074:-1
so has part: feature:447867-448074:-1:exon
so has part: feature:447005-447116:-1:exon
so has part: feature:425564-425616:-1:exon
so has part: feature:404542-404709:-1:exon
so has part: feature:397047-397069:-1:exon
so has part: feature:391321-391505:-1:exon
so has part: feature:388926-389038:-1:exon
so has part: feature:386135-386243:-1:exon
so has part: feature:384675-384823:-1:exon
so has part: feature:383601-383796:-1:exon
so has part: feature:382218-382342:-1:exon
so has part: feature:381787-381932:-1:exon
so has part: feature:381184-381295:-1:exon
so has part: feature:379106-379236:-1:exon

XP_035192907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447867-448074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447005-447116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425564-425616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404542-404709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397047-397069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:391321-391505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388926-389038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386135-386243:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384675-384823:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383601-383796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:382218-382342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381787-381932:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381184-381295:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379106-379236:-1:exon

RANBP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RANBP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 10 isoform X3
translation: MGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPSNLYPTVGLQTPGEIVDANFGQQPFVFDIEDYMREWRAKIQSTIKRFPIGDRLGEWQAMLQNMVSSYLVHHGYCSTATAFARVTDTTIQEEQTSIKNRQRIQKLVLAGRVGEAIEATQQLYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRCFSARSPRSQDSYPGSPSLSPRHGSNNSHVHSTGADSPTCSNGVMSTKSKQSHSKYPTLSSSSSSSSSSSPSSVNYSESNSTDSTKSQQHSSTSNQETSDSEMEMEAEHYPNGVLENSSTRIMNGTYKHEEILQTDESSMEDSCSQRQLCGGNHAATERMIQFGRELQMLSEQLCREYGKNTMHKKMLQDAFSLLAYSDPWNCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARVGLGSCSFARVDDYLH
SIO_010081: RANBP10
subclass of: SO_0000673
so part of: RANBP10
location: complement(join(379106..379236,381184..381295,381787..381932,382218..382342,383601..383796,384675..384823,386135..386243,388926..389038,391321..391505,397047..397069,404542..404709,425564..425612))
location: region:379106-425612:-1
so has part: feature:425564-425612:-1:exon
so has part: feature:404542-404709:-1:exon
so has part: feature:397047-397069:-1:exon
so has part: feature:391321-391505:-1:exon
so has part: feature:388926-389038:-1:exon
so has part: feature:386135-386243:-1:exon
so has part: feature:384675-384823:-1:exon
so has part: feature:383601-383796:-1:exon
so has part: feature:382218-382342:-1:exon
so has part: feature:381787-381932:-1:exon
so has part: feature:381184-381295:-1:exon
so has part: feature:379106-379236:-1:exon

XP_035192909.1
type: Protein
SIO_000068: ncbiprotein

position:425612:-1
position: 425612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425564-425612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404542-404709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397047-397069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391321-391505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388926-389038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386135-386243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384675-384823:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383601-383796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382218-382342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:381787-381932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381184-381295:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:379106-379236:-1:exon

TSNAXIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TSNAXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452229..469356
location: region:452229-469356:1
so has part: feature:452229-469356:1:exon
subclass of: SO_0000010

118172842
type: Gene
SIO_000068: ncbigene

position:452229:1
position: 452229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469356:1
position: 469356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452229-469356:1:exon

TSNAXIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TSNAXIP1
product: translin associated factor X interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_035337028.1
SIO_010081: TSNAXIP1
subclass of: SO_0000673
so part of: TSNAXIP1
location: join(452229..452271,453624..453717,458842..458977,459377..459546,460461..460620,460898..461028,461689..461817,463405..463566,464557..464666,465506..465629,465971..466089,467198..469356)
location: region:452229-469356:1
so has part: feature:452229-452271:1:exon
so has part: feature:453624-453717:1:exon
so has part: feature:458842-458977:1:exon
so has part: feature:459377-459546:1:exon
so has part: feature:460461-460620:1:exon
so has part: feature:460898-461028:1:exon
so has part: feature:461689-461817:1:exon
so has part: feature:463405-463566:1:exon
so has part: feature:464557-464666:1:exon
so has part: feature:465506-465629:1:exon
so has part: feature:465971-466089:1:exon
so has part: feature:467198-469356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452229-452271:1:exon

position:452271:1
position: 452271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453624-453717:1:exon

position:453624:1
position: 453624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453717:1
position: 453717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:458842-458977:1:exon

position:458842:1
position: 458842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458977:1
position: 458977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459377-459546:1:exon

position:459377:1
position: 459377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459546:1
position: 459546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:460461-460620:1:exon

position:460461:1
position: 460461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460620:1
position: 460620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:460898-461028:1:exon

position:460898:1
position: 460898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461028:1
position: 461028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:461689-461817:1:exon

position:461689:1
position: 461689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461817:1
position: 461817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:463405-463566:1:exon

position:463405:1
position: 463405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463566:1
position: 463566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:464557-464666:1:exon

position:464557:1
position: 464557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464666:1
position: 464666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:465506-465629:1:exon

position:465506:1
position: 465506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465629:1
position: 465629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:465971-466089:1:exon

position:465971:1
position: 465971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466089:1
position: 466089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:467198-469356:1:exon

position:467198:1
position: 467198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSNAXIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TSNAXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated factor X-interacting protein 1
translation: MNMKLHWVEHLQTSVAEEYTRYLNEYGARKLLLAKLNDMHNEQLNVKQHQTQDVKGEDVVKLTLALKIARQDLTKAQVKLNAMIADYGDVVPRREFESLEKKYSDLQQEMETLKKDFGQLHKEYQTLLEIQRETAEERDNFFTELQQAQRSCTPRPSWAKCSEVIPGGADRWGCLAEGKTSDQLVDVLLEEIGTRLLKEINVFPGWGKGDKVPVYLRHEGEVKNKKLTKKDVVNILKDIWKEKIALEQQTGKRPVLPEFFLSYLQKKYGDTSAMEWSYTLYENMRLCPSNHVMSSFYDILTGKVGEEQYHIQNQLISNLQKELAACDSSNSGSLTSEQFRMAMREAFPLKRQDSIQELIDASRYKLDCTEELIDYKSLFKEDEEGNPEPFVAKIRSQYVREKLREKQEYLRELRNNLGDLIEVNAEDLKAAFCTIDPDIDDQTLNTYVGLAYQVGREQTDQEVVPVDTALERLLAGDVRRVGPAAREESKTDWVEE
SIO_010081: TSNAXIP1
subclass of: SO_0000673
so part of: TSNAXIP1
location: join(453697..453717,458842..458977,459377..459546,460461..460620,460898..461028,461689..461817,463405..463566,464557..464666,465506..465629,465971..466089,467198..467426)
location: region:453697-467426:1
so has part: feature:453697-453717:1:exon
so has part: feature:458842-458977:1:exon
so has part: feature:459377-459546:1:exon
so has part: feature:460461-460620:1:exon
so has part: feature:460898-461028:1:exon
so has part: feature:461689-461817:1:exon
so has part: feature:463405-463566:1:exon
so has part: feature:464557-464666:1:exon
so has part: feature:465506-465629:1:exon
so has part: feature:465971-466089:1:exon
so has part: feature:467198-467426:1:exon

XP_035192919.1
type: Protein
SIO_000068: ncbiprotein

position:453697:1
position: 453697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467426:1
position: 467426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453697-453717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458842-458977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459377-459546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460461-460620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:460898-461028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461689-461817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463405-463566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464557-464666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:465506-465629:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:465971-466089:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:467198-467426:1:exon

CENPT
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CENPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(472282..492337)
location: region:472282-492337:-1
so has part: feature:472282-492337:-1:exon
subclass of: SO_0000010

118172834
type: Gene
SIO_000068: ncbigene

position:472282:-1
position: 472282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492337:-1
position: 492337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472282-492337:-1:exon

CENPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CENPT
product: centromere protein T, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_035337015.1
SIO_010081: CENPT
subclass of: SO_0000673
so part of: CENPT
location: complement(join(472282..472692,474428..474532,475342..475519,478675..478770,480034..480243,480977..481120,485535..485963,486416..486558,487766..487796,488757..488890,490495..490588,491469..491595,492223..492337))
location: region:472282-492337:-1
so has part: feature:492223-492337:-1:exon
so has part: feature:491469-491595:-1:exon
so has part: feature:490495-490588:-1:exon
so has part: feature:488757-488890:-1:exon
so has part: feature:487766-487796:-1:exon
so has part: feature:486416-486558:-1:exon
so has part: feature:485535-485963:-1:exon
so has part: feature:480977-481120:-1:exon
so has part: feature:480034-480243:-1:exon
so has part: feature:478675-478770:-1:exon
so has part: feature:475342-475519:-1:exon
so has part: feature:474428-474532:-1:exon
so has part: feature:472282-472692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492223-492337:-1:exon

position:492223:-1
position: 492223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491469-491595:-1:exon

position:491469:-1
position: 491469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491595:-1
position: 491595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490495-490588:-1:exon

position:490495:-1
position: 490495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490588:-1
position: 490588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:488757-488890:-1:exon

position:488757:-1
position: 488757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488890:-1
position: 488890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:487766-487796:-1:exon

position:487766:-1
position: 487766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487796:-1
position: 487796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:486416-486558:-1:exon

position:486416:-1
position: 486416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486558:-1
position: 486558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485535-485963:-1:exon

position:485535:-1
position: 485535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485963:-1
position: 485963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:480977-481120:-1:exon

position:480977:-1
position: 480977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481120:-1
position: 481120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:480034-480243:-1:exon

position:480034:-1
position: 480034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480243:-1
position: 480243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:478675-478770:-1:exon

position:478675:-1
position: 478675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478770:-1
position: 478770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:475342-475519:-1:exon

position:475342:-1
position: 475342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475519:-1
position: 475519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:474428-474532:-1:exon

position:474428:-1
position: 474428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474532:-1
position: 474532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:472282-472692:-1:exon

position:472692:-1
position: 472692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CENPT
product: centromere protein T, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_035337014.1
SIO_010081: CENPT
subclass of: SO_0000673
so part of: CENPT
location: complement(join(472282..472692,474428..474532,475342..475506,478674..478770,480034..480243,480977..481120,485535..485963,486416..486558,487766..487796,488757..488890,490495..490588,491469..491595,491691..491759))
location: region:472282-491759:-1
so has part: feature:491691-491759:-1:exon
so has part: feature:491469-491595:-1:exon
so has part: feature:490495-490588:-1:exon
so has part: feature:488757-488890:-1:exon
so has part: feature:487766-487796:-1:exon
so has part: feature:486416-486558:-1:exon
so has part: feature:485535-485963:-1:exon
so has part: feature:480977-481120:-1:exon
so has part: feature:480034-480243:-1:exon
so has part: feature:478674-478770:-1:exon
so has part: feature:475342-475506:-1:exon
so has part: feature:474428-474532:-1:exon
so has part: feature:472282-472692:-1:exon

position:491759:-1
position: 491759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491691-491759:-1:exon

position:491691:-1
position: 491691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491469-491595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490495-490588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488757-488890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487766-487796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486416-486558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485535-485963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480977-481120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:480034-480243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478674-478770:-1:exon

position:478674:-1
position: 478674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:475342-475506:-1:exon

position:475506:-1
position: 475506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:474428-474532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:472282-472692:-1:exon

CENPT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CENPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein T isoform X1
translation: MDGVRARREARRSGRRSLGDRLRGGLGPGKGDAAARRAPPKQRPAAFPELDNATPRGLLRRVIQNQPQVSPLAPQVAEHKETEDAQSEPPSRRTSSMVELQLPDLVPEDTSIATFRMTRKRKKLSISEFERAADKRLPQNQAHSALDSTLARSLHMSLGSVLAPDSVEKKGLLRRPKNRKPIDIAAFEGGVEQNLLQRKAQNYLVDLQTASTIEAATLTSDAEIMLNNTELFVQPQPGEQNQKKPPALEPQLSESKTPAQRSKISNATQEEGKLVGRVSSVGTDEGRTQRYSEEELINGYDHVDSVTHVSQKTSANQGEDEQGHSRQSEPMEQLSDSEEVSGTTEHHTDAGYSEHLEKKLTKKSESQITVTPEEGGVAEGSVKHQGSPEAEQEMARSARASSLSRHSRAFSSFEKSGTKPLKEAVEQADEPEDRAVMGELDGPEEESTEDEAETEGQESKEGSMKTPMFVRAAAYSPLPLLSTPRPAKPAAPESPLQPRRAKPVPKSSGTSQEKKREPALASSYIKQIFRHYAKMPVARDAYKIVEKCCEKYFKHLSNDLEAYAHHAGRKTVEMADLELLMRRQGLVTDKMPLHVLIERYLPLEYRKLLIPVAVSGNKVIPSKSTCLSGRW
SIO_010081: CENPT
subclass of: SO_0000673
so part of: CENPT
location: complement(join(472545..472692,474428..474532,475342..475506,478674..478770,480034..480243,480977..481120,485535..485963,486416..486558,487766..487796,488757..488890,490495..490588,491469..491595,491691..491759))
location: region:472545-491759:-1
so has part: feature:491691-491759:-1:exon
so has part: feature:491469-491595:-1:exon
so has part: feature:490495-490588:-1:exon
so has part: feature:488757-488890:-1:exon
so has part: feature:487766-487796:-1:exon
so has part: feature:486416-486558:-1:exon
so has part: feature:485535-485963:-1:exon
so has part: feature:480977-481120:-1:exon
so has part: feature:480034-480243:-1:exon
so has part: feature:478674-478770:-1:exon
so has part: feature:475342-475506:-1:exon
so has part: feature:474428-474532:-1:exon
so has part: feature:472545-472692:-1:exon

XP_035192905.1
type: Protein
SIO_000068: ncbiprotein

position:472545:-1
position: 472545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491691-491759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491469-491595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490495-490588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488757-488890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487766-487796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486416-486558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485535-485963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480977-481120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:480034-480243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478674-478770:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:475342-475506:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:474428-474532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:472545-472692:-1:exon

CENPT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CENPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein T isoform X2
translation: MVELQLPDLVPEDTSIATFRMTRKRKKLSISEFERAADKRLPQNQAHSALDSTLARSLHMSLGSVLAPDSVEKKGLLRRPKNRKPIDIAAFEGGVEQNLLQRKAQNYLVDLQTASTIEAATLTSDAEIMLNNTELFVQPQPGEQNQKKPPALEPQLSESKTPAQRSKISNATQEEGKLVGRVSSVGTDEGRTQRYSEEELINGYDHVDSVTHVSQKTSANQGEDEQGHSRQSEPMEQLSDSEEVSGTTEHHTDAGYSEHLEKKLTKKSESQITVTPEEGGVAEGSVKHQGSPEAEQEMARSARASSLSRHSRAFSSFEKSGTKPLKEAVEQADEPEDRAVMGELDGPEEESTEDEAETEGQESKEGSMKTPMFVRAAAYSPLPLLSTPRPAKPAAPDFHQRSPLQPRRAKPVPKSSGTSQEKKREPALASSYIKQIFRHYAKMPVARDAYKIVEKCCEKYFKHLSNDLEAYAHHAGRKTVEMADLELLMRRQGLVTDKMPLHVLIERYLPLEYRKLLIPVAVSGNKVIPSKSTCLSGRW
SIO_010081: CENPT
subclass of: SO_0000673
so part of: CENPT
location: complement(join(472545..472692,474428..474532,475342..475519,478675..478770,480034..480243,480977..481120,485535..485963,486416..486558,487766..487796,488757..488890,490495..490496))
location: region:472545-490496:-1
so has part: feature:490495-490496:-1:exon
so has part: feature:488757-488890:-1:exon
so has part: feature:487766-487796:-1:exon
so has part: feature:486416-486558:-1:exon
so has part: feature:485535-485963:-1:exon
so has part: feature:480977-481120:-1:exon
so has part: feature:480034-480243:-1:exon
so has part: feature:478675-478770:-1:exon
so has part: feature:475342-475519:-1:exon
so has part: feature:474428-474532:-1:exon
so has part: feature:472545-472692:-1:exon

XP_035192906.1
type: Protein
SIO_000068: ncbiprotein

position:490496:-1
position: 490496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490495-490496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488757-488890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487766-487796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486416-486558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485535-485963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480977-481120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480034-480243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478675-478770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475342-475519:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:474428-474532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:472545-472692:-1:exon

THAP11
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: THAP11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 492046..495351
location: region:492046-495351:1
so has part: feature:492046-495351:1:exon
subclass of: SO_0000010

118172857
type: Gene
SIO_000068: ncbigene

position:492046:1
position: 492046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495351:1
position: 495351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492046-495351:1:exon

THAP11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: THAP11
product: THAP domain containing 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035337044.1
SIO_010081: THAP11
subclass of: SO_0000673
so part of: THAP11
location: join(492046..492460,492870..495351)
location: region:492046-495351:1
so has part: feature:492046-492460:1:exon
so has part: feature:492870-495351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492046-492460:1:exon

position:492460:1
position: 492460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492870-495351:1:exon

position:492870:1
position: 492870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THAP11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: THAP11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THAP domain-containing protein 11
translation: MPGFTCCVPGCYNNSHRDKALHFYTFPKDEELRRLWLKNVSRAGVSGCFSTFQPTTGHRVCSEHFQGGRKSYLVRVPTIFPLRGAAEDVKPIDLTVQVELGAAAAAGPGPGRLPVAAAVGEEGPVEGGPPDHSYSLSSGTTSEELLRKLNEQRDIIALLEVKMKEMKGSIRRLRLAEAQLREEIREKDRLLHAASAGARKRHGL
SIO_010081: THAP11
subclass of: SO_0000673
so part of: THAP11
location: join(492209..492460,492870..493232)
location: region:492209-493232:1
so has part: feature:492209-492460:1:exon
so has part: feature:492870-493232:1:exon

XP_035192935.1
type: Protein
SIO_000068: ncbiprotein

position:492209:1
position: 492209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493232:1
position: 493232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492209-492460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492870-493232:1:exon

NUTF2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: NUTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 499407..523601
location: region:499407-523601:1
so has part: feature:499407-523601:1:exon
subclass of: SO_0000010

118172685
type: Gene
SIO_000068: ncbigene

position:499407:1
position: 499407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523601:1
position: 523601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499407-523601:1:exon

NUTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NUTF2
product: nuclear transport factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035336760.1
SIO_010081: NUTF2
subclass of: SO_0000673
so part of: NUTF2
location: join(499407..499500,508871..508995,512011..512082,515662..515760,523073..523601)
location: region:499407-523601:1
so has part: feature:499407-499500:1:exon
so has part: feature:508871-508995:1:exon
so has part: feature:512011-512082:1:exon
so has part: feature:515662-515760:1:exon
so has part: feature:523073-523601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499407-499500:1:exon

position:499500:1
position: 499500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508871-508995:1:exon

position:508871:1
position: 508871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508995:1
position: 508995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512011-512082:1:exon

position:512011:1
position: 512011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512082:1
position: 512082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:515662-515760:1:exon

position:515662:1
position: 515662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515760:1
position: 515760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:523073-523601:1:exon

position:523073:1
position: 523073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NUTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transport factor 2
translation: MGDKPIWEQIGSSFIQHYYQLFDADRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCILSMVVGQLKADEDPIMGFHQIFLLKNINDAWVCTNDMFRLALHNFG
SIO_010081: NUTF2
subclass of: SO_0000673
so part of: NUTF2
location: join(508897..508995,512011..512082,515662..515760,523073..523186)
location: region:508897-523186:1
so has part: feature:508897-508995:1:exon
so has part: feature:512011-512082:1:exon
so has part: feature:515662-515760:1:exon
so has part: feature:523073-523186:1:exon

XP_035192651.1
type: Protein
SIO_000068: ncbiprotein

position:508897:1
position: 508897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523186:1
position: 523186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508897-508995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512011-512082:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:515662-515760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:523073-523186:1:exon

EDC4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: EDC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 524984..562028
location: region:524984-562028:1
so has part: feature:524984-562028:1:exon
subclass of: SO_0000010

118172684
type: Gene
SIO_000068: ncbigene

position:524984:1
position: 524984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562028:1
position: 562028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524984-562028:1:exon

EDC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EDC4
product: enhancer of mRNA decapping 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_035336758.1
SIO_010081: EDC4
subclass of: SO_0000673
so part of: EDC4
location: join(524984..525153,528711..528867,529937..530048,530868..530967,532547..532736,533770..533917,534432..534536,535933..536042,536580..536663,537194..537289,538338..538440,538872..539052,540935..541007,541468..541559,542217..542413,544509..544597,545376..545529,546734..547197,548840..548941,549925..550077,551474..551510,552462..552642,554505..554660,555416..555531,556243..556408,557620..557806,558974..559193,559912..560075,561460..562028)
location: region:524984-562028:1
so has part: feature:524984-525153:1:exon
so has part: feature:528711-528867:1:exon
so has part: feature:529937-530048:1:exon
so has part: feature:530868-530967:1:exon
so has part: feature:532547-532736:1:exon
so has part: feature:533770-533917:1:exon
so has part: feature:534432-534536:1:exon
so has part: feature:535933-536042:1:exon
so has part: feature:536580-536663:1:exon
so has part: feature:537194-537289:1:exon
so has part: feature:538338-538440:1:exon
so has part: feature:538872-539052:1:exon
so has part: feature:540935-541007:1:exon
so has part: feature:541468-541559:1:exon
so has part: feature:542217-542413:1:exon
so has part: feature:544509-544597:1:exon
so has part: feature:545376-545529:1:exon
so has part: feature:546734-547197:1:exon
so has part: feature:548840-548941:1:exon
so has part: feature:549925-550077:1:exon
so has part: feature:551474-551510:1:exon
so has part: feature:552462-552642:1:exon
so has part: feature:554505-554660:1:exon
so has part: feature:555416-555531:1:exon
so has part: feature:556243-556408:1:exon
so has part: feature:557620-557806:1:exon
so has part: feature:558974-559193:1:exon
so has part: feature:559912-560075:1:exon
so has part: feature:561460-562028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:524984-525153:1:exon

position:525153:1
position: 525153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528711-528867:1:exon

position:528711:1
position: 528711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528867:1
position: 528867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529937-530048:1:exon

position:529937:1
position: 529937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530048:1
position: 530048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:530868-530967:1:exon

position:530868:1
position: 530868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530967:1
position: 530967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:532547-532736:1:exon

position:532547:1
position: 532547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532736:1
position: 532736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:533770-533917:1:exon

position:533770:1
position: 533770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533917:1
position: 533917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:534432-534536:1:exon

position:534432:1
position: 534432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534536:1
position: 534536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:535933-536042:1:exon

position:535933:1
position: 535933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536042:1
position: 536042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:536580-536663:1:exon

position:536580:1
position: 536580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536663:1
position: 536663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:537194-537289:1:exon

position:537194:1
position: 537194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537289:1
position: 537289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:538338-538440:1:exon

position:538338:1
position: 538338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538440:1
position: 538440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:538872-539052:1:exon

position:538872:1
position: 538872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539052:1
position: 539052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:540935-541007:1:exon

position:540935:1
position: 540935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541007:1
position: 541007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:541468-541559:1:exon

position:541468:1
position: 541468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541559:1
position: 541559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:542217-542413:1:exon

position:542217:1
position: 542217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542413:1
position: 542413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:544509-544597:1:exon

position:544509:1
position: 544509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544597:1
position: 544597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:545376-545529:1:exon

position:545376:1
position: 545376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545529:1
position: 545529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:546734-547197:1:exon

position:546734:1
position: 546734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547197:1
position: 547197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:548840-548941:1:exon

position:548840:1
position: 548840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548941:1
position: 548941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:549925-550077:1:exon

position:549925:1
position: 549925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550077:1
position: 550077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:551474-551510:1:exon

position:551474:1
position: 551474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551510:1
position: 551510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:552462-552642:1:exon

position:552462:1
position: 552462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552642:1
position: 552642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:554505-554660:1:exon

position:554505:1
position: 554505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554660:1
position: 554660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:555416-555531:1:exon

position:555416:1
position: 555416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555531:1
position: 555531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:556243-556408:1:exon

position:556243:1
position: 556243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556408:1
position: 556408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:557620-557806:1:exon

position:557620:1
position: 557620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557806:1
position: 557806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:558974-559193:1:exon

position:558974:1
position: 558974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559193:1
position: 559193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:559912-560075:1:exon

position:559912:1
position: 559912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560075:1
position: 560075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:561460-562028:1:exon

position:561460:1
position: 561460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EDC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EDC4
product: enhancer of mRNA decapping 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_035336759.1
SIO_010081: EDC4
subclass of: SO_0000673
so part of: EDC4
location: join(524984..525153,528711..528867,529937..530048,530868..530967,532547..532736,533770..533917,534432..534536,535933..536042,536580..536663,537194..537289,538338..538440,538872..539052,540935..541007,541468..541559,542217..542413,544509..544597,545376..545529,546734..547197,548840..548941,551474..551510,552462..552642,554505..554660,555416..555531,556243..556408,557620..557806,558974..559193,559912..560075,561460..562028)
location: region:524984-562028:1
so has part: feature:524984-525153:1:exon
so has part: feature:528711-528867:1:exon
so has part: feature:529937-530048:1:exon
so has part: feature:530868-530967:1:exon
so has part: feature:532547-532736:1:exon
so has part: feature:533770-533917:1:exon
so has part: feature:534432-534536:1:exon
so has part: feature:535933-536042:1:exon
so has part: feature:536580-536663:1:exon
so has part: feature:537194-537289:1:exon
so has part: feature:538338-538440:1:exon
so has part: feature:538872-539052:1:exon
so has part: feature:540935-541007:1:exon
so has part: feature:541468-541559:1:exon
so has part: feature:542217-542413:1:exon
so has part: feature:544509-544597:1:exon
so has part: feature:545376-545529:1:exon
so has part: feature:546734-547197:1:exon
so has part: feature:548840-548941:1:exon
so has part: feature:551474-551510:1:exon
so has part: feature:552462-552642:1:exon
so has part: feature:554505-554660:1:exon
so has part: feature:555416-555531:1:exon
so has part: feature:556243-556408:1:exon
so has part: feature:557620-557806:1:exon
so has part: feature:558974-559193:1:exon
so has part: feature:559912-560075:1:exon
so has part: feature:561460-562028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:524984-525153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528711-528867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529937-530048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530868-530967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532547-532736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533770-533917:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534432-534536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535933-536042:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536580-536663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537194-537289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538338-538440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538872-539052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:540935-541007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541468-541559:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542217-542413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544509-544597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:545376-545529:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:546734-547197:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:548840-548941:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:551474-551510:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:552462-552642:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:554505-554660:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:555416-555531:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:556243-556408:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:557620-557806:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:558974-559193:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:559912-560075:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:561460-562028:1:exon

EDC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EDC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of mRNA-decapping protein 4 isoform X1
translation: MASSNSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSISLGALQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYALRAASNGSAMVRVLSISTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLSMDKDKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEENGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPNIKEGFIVVKGHSTYLSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTVCFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMGASVPSHGSHEEFAFPDHIADLGTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSASLQQITVSPGSSVSSLTAVTAMSSTSVTDASMSRPSEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNSSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQRSFTAAPSGLPAEVLEPNHHADSMASAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENACSDSVVGQPWPAAPDITRETRNSMADSPRDEVEEKHKSSAYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQQRELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPVASQLSNTIATKLTAVEGTLKESITKLVKSKNLTDSIVRATADTLQGTIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSTTEQLASTVTASVHAEVQHQLHIIVGNLQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLLQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
SIO_010081: EDC4
subclass of: SO_0000673
so part of: EDC4
location: join(525075..525153,528711..528867,529937..530048,530868..530967,532547..532736,533770..533917,534432..534536,535933..536042,536580..536663,537194..537289,538338..538440,538872..539052,540935..541007,541468..541559,542217..542413,544509..544597,545376..545529,546734..547197,548840..548941,549925..550077,551474..551510,552462..552642,554505..554660,555416..555531,556243..556408,557620..557806,558974..559193,559912..560075,561460..561652)
location: region:525075-561652:1
so has part: feature:525075-525153:1:exon
so has part: feature:528711-528867:1:exon
so has part: feature:529937-530048:1:exon
so has part: feature:530868-530967:1:exon
so has part: feature:532547-532736:1:exon
so has part: feature:533770-533917:1:exon
so has part: feature:534432-534536:1:exon
so has part: feature:535933-536042:1:exon
so has part: feature:536580-536663:1:exon
so has part: feature:537194-537289:1:exon
so has part: feature:538338-538440:1:exon
so has part: feature:538872-539052:1:exon
so has part: feature:540935-541007:1:exon
so has part: feature:541468-541559:1:exon
so has part: feature:542217-542413:1:exon
so has part: feature:544509-544597:1:exon
so has part: feature:545376-545529:1:exon
so has part: feature:546734-547197:1:exon
so has part: feature:548840-548941:1:exon
so has part: feature:549925-550077:1:exon
so has part: feature:551474-551510:1:exon
so has part: feature:552462-552642:1:exon
so has part: feature:554505-554660:1:exon
so has part: feature:555416-555531:1:exon
so has part: feature:556243-556408:1:exon
so has part: feature:557620-557806:1:exon
so has part: feature:558974-559193:1:exon
so has part: feature:559912-560075:1:exon
so has part: feature:561460-561652:1:exon

XP_035192649.1
type: Protein
SIO_000068: ncbiprotein

position:525075:1
position: 525075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561652:1
position: 561652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525075-525153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528711-528867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529937-530048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530868-530967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532547-532736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533770-533917:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534432-534536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535933-536042:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536580-536663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537194-537289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538338-538440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538872-539052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:540935-541007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541468-541559:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542217-542413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544509-544597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:545376-545529:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:546734-547197:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:548840-548941:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:549925-550077:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551474-551510:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:552462-552642:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:554505-554660:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:555416-555531:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:556243-556408:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:557620-557806:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:558974-559193:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:559912-560075:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:561460-561652:1:exon

EDC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EDC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enhancer of mRNA-decapping protein 4 isoform X2
translation: MASSNSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSISLGALQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYALRAASNGSAMVRVLSISTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLSMDKDKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEENGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPNIKEGFIVVKGHSTYLSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTVCFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMGASVPSHGSHEEFAFPDHIADLGTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSASLQQITVSPGSSVSSLTAVTAMSSTSVTDASMSRPSEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNSSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQRSFTAAPSGLPAEVLEPNHHADSMASAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENACSDSVVGQPWPAAPDITRETRNSMADSPRDEVEEKHKSSAYHRHSYHLLQHDSQDASAEQRDVNQSPRSSNNQVTPEFQDELMCILRSQQRELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPVASQLSNTIATKLTAVEGTLKESITKLVKSKNLTDSIVRATADTLQGTIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSTTEQLASTVTASVHAEVQHQLHIIVGNLQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLLQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
SIO_010081: EDC4
subclass of: SO_0000673
so part of: EDC4
location: join(525075..525153,528711..528867,529937..530048,530868..530967,532547..532736,533770..533917,534432..534536,535933..536042,536580..536663,537194..537289,538338..538440,538872..539052,540935..541007,541468..541559,542217..542413,544509..544597,545376..545529,546734..547197,548840..548941,551474..551510,552462..552642,554505..554660,555416..555531,556243..556408,557620..557806,558974..559193,559912..560075,561460..561652)
location: region:525075-561652:1
so has part: feature:525075-525153:1:exon
so has part: feature:528711-528867:1:exon
so has part: feature:529937-530048:1:exon
so has part: feature:530868-530967:1:exon
so has part: feature:532547-532736:1:exon
so has part: feature:533770-533917:1:exon
so has part: feature:534432-534536:1:exon
so has part: feature:535933-536042:1:exon
so has part: feature:536580-536663:1:exon
so has part: feature:537194-537289:1:exon
so has part: feature:538338-538440:1:exon
so has part: feature:538872-539052:1:exon
so has part: feature:540935-541007:1:exon
so has part: feature:541468-541559:1:exon
so has part: feature:542217-542413:1:exon
so has part: feature:544509-544597:1:exon
so has part: feature:545376-545529:1:exon
so has part: feature:546734-547197:1:exon
so has part: feature:548840-548941:1:exon
so has part: feature:551474-551510:1:exon
so has part: feature:552462-552642:1:exon
so has part: feature:554505-554660:1:exon
so has part: feature:555416-555531:1:exon
so has part: feature:556243-556408:1:exon
so has part: feature:557620-557806:1:exon
so has part: feature:558974-559193:1:exon
so has part: feature:559912-560075:1:exon
so has part: feature:561460-561652:1:exon

XP_035192650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525075-525153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528711-528867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529937-530048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530868-530967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532547-532736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533770-533917:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534432-534536:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535933-536042:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536580-536663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537194-537289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538338-538440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538872-539052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:540935-541007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541468-541559:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542217-542413:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544509-544597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:545376-545529:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:546734-547197:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:548840-548941:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:551474-551510:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:552462-552642:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:554505-554660:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:555416-555531:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:556243-556408:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:557620-557806:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:558974-559193:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:559912-560075:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:561460-561652:1:exon

NRN1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: NRN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 562558..565629
location: region:562558-565629:1
so has part: feature:562558-565629:1:exon
subclass of: SO_0000010

118173005
type: Gene
SIO_000068: ncbigene

position:562558:1
position: 562558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565629:1
position: 565629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562558-565629:1:exon

NRN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: NRN1L
product: neuritin 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_035337232.1
SIO_010081: NRN1L
subclass of: SO_0000673
so part of: NRN1L
location: join(562558..562662,564930..565089,565201..565629)
location: region:562558-565629:1
so has part: feature:562558-562662:1:exon
so has part: feature:564930-565089:1:exon
so has part: feature:565201-565629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562558-562662:1:exon

position:562662:1
position: 562662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564930-565089:1:exon

position:564930:1
position: 564930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565089:1
position: 565089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:565201-565629:1:exon

position:565201:1
position: 565201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: NRN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuritin-like protein
translation: MGCWRLLGLVCPLLLQLLHLAATQEPVSMAGKCDTIYKGFAGCLISLGDSMAQSVRQQQQEGGQEAQELDTICKSWDDFHACASGVLSSCPEEAAAIWESLRQESRKIQFQGNLQELCSARGRLASSRGSPPAETNQATLRGSAVLRRPGLLPLLALVLLVARL
SIO_010081: NRN1L
subclass of: SO_0000673
so part of: NRN1L
location: join(562602..562662,564930..565089,565201..565474)
location: region:562602-565474:1
so has part: feature:562602-562662:1:exon
so has part: feature:564930-565089:1:exon
so has part: feature:565201-565474:1:exon

XP_035193123.1
type: Protein
SIO_000068: ncbiprotein

position:562602:1
position: 562602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565474:1
position: 565474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562602-562662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564930-565089:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565201-565474:1:exon

PSKH1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: PSKH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 571087..600718
location: region:571087-600718:1
so has part: feature:571087-600718:1:exon
subclass of: SO_0000010

118172663
type: Gene
SIO_000068: ncbigene

position:571087:1
position: 571087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600718:1
position: 600718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571087-600718:1:exon

PSKH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSKH1
product: protein serine kinase H1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_035336729.1
SIO_010081: PSKH1
subclass of: SO_0000673
so part of: PSKH1
location: join(571087..571164,572295..573326,573502..573720)
location: region:571087-573720:1
so has part: feature:571087-571164:1:exon
so has part: feature:572295-573326:1:exon
so has part: feature:573502-573720:1:exon

position:573720:1
position: 573720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571087-571164:1:exon

position:571164:1
position: 571164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:572295-573326:1:exon

position:572295:1
position: 572295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573326:1
position: 573326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:573502-573720:1:exon

position:573502:1
position: 573502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSKH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: PSKH1
product: protein serine kinase H1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035336728.1
SIO_010081: PSKH1
subclass of: SO_0000673
so part of: PSKH1
location: join(571088..571164,572295..573326,599934..600718)
location: region:571088-600718:1
so has part: feature:571088-571164:1:exon
so has part: feature:572295-573326:1:exon
so has part: feature:599934-600718:1:exon

position:571088:1
position: 571088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571088-571164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572295-573326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599934-600718:1:exon

position:599934:1
position: 599934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSKH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSKH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase H1 isoform X1
translation: MGCGTSKVLPEPPKDVQLDLVKKVEPYTGHNDIYKHFIKDDCGTVIKAGSPSPPRHANPYPGNHLPTHVDQPEPRKNKVAKYRAKFDPRVTAKYDIKALIGRGSFSRVVRVEHKATKQPYAIKMIETKYREGREVCESELSVLRRVRHTNIIQLIEVFETQDRVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHTLGITHRDLKPENLLYYHPGTDSKIMITDFGLASARKKGDDCLMKTTCGTPEYIAPEILVRKPYTNSVDMWALGVISYILLSGTMPFEDDNRTRLYRQILKGKYSYSGEPWPSVSNLAKDFIDRLLTVDPSDRMTALQALKHPWVVSMAASSSMKNLHRSISQNLLKRASSRCQSTKSAQSTRSSRSTKSNKSRRVRERELRELNLRYQQQYTG
SIO_010081: PSKH1
subclass of: SO_0000673
so part of: PSKH1
location: join(572382..573326,599934..600251)
location: region:572382-600251:1
so has part: feature:572382-573326:1:exon
so has part: feature:599934-600251:1:exon

XP_035192619.1
type: Protein
SIO_000068: ncbiprotein

position:572382:1
position: 572382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600251:1
position: 600251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572382-573326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599934-600251:1:exon

PSKH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: PSKH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase H1 isoform X2
translation: MGCGTSKVLPEPPKDVQLDLVKKVEPYTGHNDIYKHFIKDDCGTVIKAGSPSPPRHANPYPGNHLPTHVDQPEPRKNKVAKYRAKFDPRVTAKYDIKALIGRGSFSRVVRVEHKATKQPYAIKMIETKYREGREVCESELSVLRRVRHTNIIQLIEVFETQDRVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHTLGITHRDLKPENLLYYHPGTDSKIMITDFGLASARKKGDDCLMKTTCGTPEYIAPEILVRKPYTNSVDMWALGVISYILLSGTMPFEDDNRTRLYRQILKGKYSYSGECSRCSTVSFLRKKKCLKKEEISSCRTELKGLEYLWVSSWDATETDAGLSFWNVMCTYLVGFQIQLQV
SIO_010081: PSKH1
subclass of: SO_0000673
so part of: PSKH1
location: join(572382..573326,573502..573705)
location: region:572382-573705:1
so has part: feature:572382-573326:1:exon
so has part: feature:573502-573705:1:exon

XP_035192620.1
type: Protein
SIO_000068: ncbiprotein

position:573705:1
position: 573705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572382-573326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573502-573705:1:exon

CTRL
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CTRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(606934..609827)
location: region:606934-609827:-1
so has part: feature:606934-609827:-1:exon
subclass of: SO_0000010

118172665
type: Gene
SIO_000068: ncbigene

position:606934:-1
position: 606934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609827:-1
position: 609827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606934-609827:-1:exon

CTRL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CTRL
product: chymotrypsin like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035336732.1
SIO_010081: CTRL
subclass of: SO_0000673
so part of: CTRL
location: complement(join(606934..607640,607827..607940,608452..608632,608730..608811,609073..609152,609283..609386,609603..609827))
location: region:606934-609827:-1
so has part: feature:609603-609827:-1:exon
so has part: feature:609283-609386:-1:exon
so has part: feature:609073-609152:-1:exon
so has part: feature:608730-608811:-1:exon
so has part: feature:608452-608632:-1:exon
so has part: feature:607827-607940:-1:exon
so has part: feature:606934-607640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609603-609827:-1:exon

position:609603:-1
position: 609603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609283-609386:-1:exon

position:609283:-1
position: 609283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609386:-1
position: 609386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609073-609152:-1:exon

position:609073:-1
position: 609073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609152:-1
position: 609152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:608730-608811:-1:exon

position:608730:-1
position: 608730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608811:-1
position: 608811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:608452-608632:-1:exon

position:608452:-1
position: 608452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608632:-1
position: 608632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:607827-607940:-1:exon

position:607827:-1
position: 607827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607940:-1
position: 607940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:606934-607640:-1:exon

position:607640:-1
position: 607640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTRL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CTRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chymotrypsin-like protease CTRL-1
translation: MAFLWAVACLALASAVSGCGVPTISPSVQYNERIINGQNAVSGSWPWQVSLQTRTGSHFCGGSLINENWVVTAAHCEFNPYSHVVVLGEYDRNSGSEAVQVKTVVKAVTHPSWDAYTLNNDITLLKLSSPAQLGSRVAPVCLAPANLALPSNLQCVTTGWGRTNTNSNALAVRLQQVSLPLVSQSQCMQYWGSSITSSMLCAGGAKRGLSSPQGDSGGPLVYKNGNVWTLIGIVSWGNSNCNVRTPAVYTRVSQFRNWIDSIVAQG
SIO_010081: CTRL
subclass of: SO_0000673
so part of: CTRL
location: complement(join(607453..607640,607827..607940,608452..608632,608730..608811,609073..609152,609283..609386,609603..609654))
location: region:607453-609654:-1
so has part: feature:609603-609654:-1:exon
so has part: feature:609283-609386:-1:exon
so has part: feature:609073-609152:-1:exon
so has part: feature:608730-608811:-1:exon
so has part: feature:608452-608632:-1:exon
so has part: feature:607827-607940:-1:exon
so has part: feature:607453-607640:-1:exon

XP_035192623.1
type: Protein
SIO_000068: ncbiprotein

position:607453:-1
position: 607453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609654:-1
position: 609654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609603-609654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609283-609386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609073-609152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608730-608811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608452-608632:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607827-607940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607453-607640:-1:exon

EXOC3L1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: EXOC3L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(611643..619063)
location: region:611643-619063:-1
so has part: feature:611643-619063:-1:exon
subclass of: SO_0000010

118172858
type: Gene
SIO_000068: ncbigene

position:611643:-1
position: 611643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619063:-1
position: 619063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611643-619063:-1:exon

EXOC3L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EXOC3L1
product: exocyst complex component 3 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035337045.1
SIO_010081: EXOC3L1
subclass of: SO_0000673
so part of: EXOC3L1
location: complement(join(611643..611829,612334..612458,612680..612835,613312..613434,614484..614613,614772..614882,615302..615402,615639..615764,615934..616051,616212..616872,617185..617404,618452..618612,618976..619063))
location: region:611643-619063:-1
so has part: feature:618976-619063:-1:exon
so has part: feature:618452-618612:-1:exon
so has part: feature:617185-617404:-1:exon
so has part: feature:616212-616872:-1:exon
so has part: feature:615934-616051:-1:exon
so has part: feature:615639-615764:-1:exon
so has part: feature:615302-615402:-1:exon
so has part: feature:614772-614882:-1:exon
so has part: feature:614484-614613:-1:exon
so has part: feature:613312-613434:-1:exon
so has part: feature:612680-612835:-1:exon
so has part: feature:612334-612458:-1:exon
so has part: feature:611643-611829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618976-619063:-1:exon

position:618976:-1
position: 618976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618452-618612:-1:exon

position:618452:-1
position: 618452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618612:-1
position: 618612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617185-617404:-1:exon

position:617185:-1
position: 617185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617404:-1
position: 617404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:616212-616872:-1:exon

position:616212:-1
position: 616212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616872:-1
position: 616872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:615934-616051:-1:exon

position:615934:-1
position: 615934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616051:-1
position: 616051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:615639-615764:-1:exon

position:615639:-1
position: 615639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615764:-1
position: 615764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:615302-615402:-1:exon

position:615302:-1
position: 615302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615402:-1
position: 615402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:614772-614882:-1:exon

position:614772:-1
position: 614772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614882:-1
position: 614882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:614484-614613:-1:exon

position:614484:-1
position: 614484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614613:-1
position: 614613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:613312-613434:-1:exon

position:613312:-1
position: 613312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613434:-1
position: 613434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:612680-612835:-1:exon

position:612680:-1
position: 612680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612835:-1
position: 612835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:612334-612458:-1:exon

position:612334:-1
position: 612334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612458:-1
position: 612458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:611643-611829:-1:exon

position:611829:-1
position: 611829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EXOC3L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EXOC3L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 3-like protein
translation: MHQVPLGEQPQLSAVQQPQPEAPCPPGPPDEEWPEVEKAEKLARGAALKWASGVFYRPENLEGLGQYRSRETQRNSSIQSRLKSTVQSYLEGVSAGLEQLRSAVQEVQSVCQELGAARWALLDCADRFQDLRQMRALMAEHVQLASVVQVLPQLFSVHEVFSHTLQLLRGQHLLEAHAEIMMMEHLRDDILSQLHLRGLSSAQATVLSYFSGLQELNESLAKQLWGIVGSSLQLVREDPVLFVTAVRIIEREEKIDDTLLLDATFLPPGRPKGWRQKFYHVLQETITGTHFHATRVDAEGPGLSRHLEALQRDIVSELRVVKDLMVQCVPAHYNILSVCAATYHQALASHLQDILREDLDKQALFHLLKWVLHVYHSSEMMGHPDLLPEVDVSSLGPLISPELVDQTERRYVVKLKATVLEWMQRTLKMEFEEWFWEKEPEMDHQGFFQSDLPVIVTKMLNSNIEVTSSITDSLQQKVYNMALEELEAFLGRLREALVQRGKEHQKDRTIPKYYVPYLLAMLNNILALSSSVPTLHPNSACREVPVSLRAALDRTQKKACQLLLEELLLDLQPLCVELASRKWLSGSQLVNSMCEVIDKYAKDFSRVKKPVFTLLLTECELLVANQYLRALMQKKMVCKSKEERGQFCDRLLQDATQLRELFCSLGLDRSQQNLEAVFAVRELLCLKDTALLSLEVLGFVTKYPDVSDEHISTLLDLRGDVSKEVRHMVLEMMAQHPQALPEGYQPIFSTILVPAPELPFCLRKGKCA
SIO_010081: EXOC3L1
subclass of: SO_0000673
so part of: EXOC3L1
location: complement(join(611643..611829,612334..612458,612680..612835,613312..613434,614484..614613,614772..614882,615302..615402,615639..615764,615934..616051,616212..616872,617185..617404,618452..618612,618976..619063))
location: region:611643-619063:-1
so has part: feature:618976-619063:-1:exon
so has part: feature:618452-618612:-1:exon
so has part: feature:617185-617404:-1:exon
so has part: feature:616212-616872:-1:exon
so has part: feature:615934-616051:-1:exon
so has part: feature:615639-615764:-1:exon
so has part: feature:615302-615402:-1:exon
so has part: feature:614772-614882:-1:exon
so has part: feature:614484-614613:-1:exon
so has part: feature:613312-613434:-1:exon
so has part: feature:612680-612835:-1:exon
so has part: feature:612334-612458:-1:exon
so has part: feature:611643-611829:-1:exon

XP_035192936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:618976-619063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618452-618612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617185-617404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616212-616872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615934-616051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615639-615764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615302-615402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614772-614882:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614484-614613:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613312-613434:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:612680-612835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:612334-612458:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:611643-611829:-1:exon

E2F4
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: E2F4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 619567..632565
location: region:619567-632565:1
so has part: feature:619567-632565:1:exon
subclass of: SO_0000010

118172664
type: Gene
SIO_000068: ncbigene

position:619567:1
position: 619567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632565:1
position: 632565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619567-632565:1:exon

E2F4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: E2F4
product: E2F transcription factor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_035336731.1
SIO_010081: E2F4
subclass of: SO_0000673
so part of: E2F4
location: join(619567..619740,620527..620636,620906..621067,621556..621599,624302..624363,624718..625003,625756..625947,627096..627143,629860..629904,630252..632565)
location: region:619567-632565:1
so has part: feature:619567-619740:1:exon
so has part: feature:620527-620636:1:exon
so has part: feature:620906-621067:1:exon
so has part: feature:621556-621599:1:exon
so has part: feature:624302-624363:1:exon
so has part: feature:624718-625003:1:exon
so has part: feature:625756-625947:1:exon
so has part: feature:627096-627143:1:exon
so has part: feature:629860-629904:1:exon
so has part: feature:630252-632565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619567-619740:1:exon

position:619740:1
position: 619740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:620527-620636:1:exon

position:620527:1
position: 620527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620636:1
position: 620636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620906-621067:1:exon

position:620906:1
position: 620906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621067:1
position: 621067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:621556-621599:1:exon

position:621556:1
position: 621556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621599:1
position: 621599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:624302-624363:1:exon

position:624302:1
position: 624302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624363:1
position: 624363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:624718-625003:1:exon

position:624718:1
position: 624718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625003:1
position: 625003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:625756-625947:1:exon

position:625756:1
position: 625756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625947:1
position: 625947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:627096-627143:1:exon

position:627096:1
position: 627096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627143:1
position: 627143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:629860-629904:1:exon

position:629860:1
position: 629860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629904:1
position: 629904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:630252-632565:1:exon

position:630252:1
position: 630252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

E2F4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: E2F4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor E2F4
translation: MAECGPQPPGGGGGGGGAGGGSSGAGAPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIAHKLIELKADIEDLEQREQELEQQKMWVQQSIKNVTEDVQNNRLAYVTHEDICKCFTGDTLLAIRAPSGTRLEVPIPEGPNGQKKYQIHLKSTSGPIDVLLVNKDAWSSPPVVLPVPPPEDLIQCQAVAPSKPQIPPLAHFQEASVPSSTQPSTPTPSSTQDHSPPAQKAPSTECSVSVAESKSSGDLDPLSNVPASTGQTAGLDTQPLQSSASLDSSSVLPSPSTSFEPIKPDPTGMLELPKELSEMFDPTRECMNSELLEELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLNL
SIO_010081: E2F4
subclass of: SO_0000673
so part of: E2F4
location: join(619567..619740,620527..620636,620906..621067,621556..621599,624302..624363,624718..625003,625756..625947,627096..627143,629860..629904,630252..630367)
location: region:619567-630367:1
so has part: feature:619567-619740:1:exon
so has part: feature:620527-620636:1:exon
so has part: feature:620906-621067:1:exon
so has part: feature:621556-621599:1:exon
so has part: feature:624302-624363:1:exon
so has part: feature:624718-625003:1:exon
so has part: feature:625756-625947:1:exon
so has part: feature:627096-627143:1:exon
so has part: feature:629860-629904:1:exon
so has part: feature:630252-630367:1:exon

XP_035192622.1
type: Protein
SIO_000068: ncbiprotein

position:630367:1
position: 630367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619567-619740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620527-620636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620906-621067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621556-621599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:624302-624363:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:624718-625003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625756-625947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:627096-627143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629860-629904:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:630252-630367:1:exon

ELMO3
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: ELMO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 632751..641918
location: region:632751-641918:1
so has part: feature:632751-641918:1:exon
subclass of: SO_0000010

118172578
type: Gene
SIO_000068: ncbigene

position:632751:1
position: 632751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641918:1
position: 641918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632751-641918:1:exon

ELMO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ELMO3
product: engulfment and cell motility 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_035336590.1
SIO_010081: ELMO3
subclass of: SO_0000673
so part of: ELMO3
location: join(632751..632906,632996..633036,633211..633283,633363..633413,633884..634053,634902..635001,635105..635256,636061..636139,636754..636804,637035..637157,637339..637470,637770..637874,638297..638405,638636..638772,638884..639047,639150..639262,639485..639589,639892..639974,640333..640413,641205..641918)
location: region:632751-641918:1
so has part: feature:632751-632906:1:exon
so has part: feature:632996-633036:1:exon
so has part: feature:633211-633283:1:exon
so has part: feature:633363-633413:1:exon
so has part: feature:633884-634053:1:exon
so has part: feature:634902-635001:1:exon
so has part: feature:635105-635256:1:exon
so has part: feature:636061-636139:1:exon
so has part: feature:636754-636804:1:exon
so has part: feature:637035-637157:1:exon
so has part: feature:637339-637470:1:exon
so has part: feature:637770-637874:1:exon
so has part: feature:638297-638405:1:exon
so has part: feature:638636-638772:1:exon
so has part: feature:638884-639047:1:exon
so has part: feature:639150-639262:1:exon
so has part: feature:639485-639589:1:exon
so has part: feature:639892-639974:1:exon
so has part: feature:640333-640413:1:exon
so has part: feature:641205-641918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:632751-632906:1:exon

position:632906:1
position: 632906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632996-633036:1:exon

position:632996:1
position: 632996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633036:1
position: 633036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:633211-633283:1:exon

position:633211:1
position: 633211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633283:1
position: 633283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633363-633413:1:exon

position:633363:1
position: 633363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633413:1
position: 633413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:633884-634053:1:exon

position:633884:1
position: 633884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634053:1
position: 634053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:634902-635001:1:exon

position:634902:1
position: 634902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635001:1
position: 635001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635105-635256:1:exon

position:635105:1
position: 635105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635256:1
position: 635256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636061-636139:1:exon

position:636061:1
position: 636061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636139:1
position: 636139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:636754-636804:1:exon

position:636754:1
position: 636754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636804:1
position: 636804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:637035-637157:1:exon

position:637035:1
position: 637035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637157:1
position: 637157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:637339-637470:1:exon

position:637339:1
position: 637339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637470:1
position: 637470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:637770-637874:1:exon

position:637770:1
position: 637770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637874:1
position: 637874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:638297-638405:1:exon

position:638297:1
position: 638297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638405:1
position: 638405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:638636-638772:1:exon

position:638636:1
position: 638636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638772:1
position: 638772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:638884-639047:1:exon

position:638884:1
position: 638884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639047:1
position: 639047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:639150-639262:1:exon

position:639150:1
position: 639150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639262:1
position: 639262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:639485-639589:1:exon

position:639485:1
position: 639485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639589:1
position: 639589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:639892-639974:1:exon

position:639892:1
position: 639892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639974:1
position: 639974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:640333-640413:1:exon

position:640333:1
position: 640333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640413:1
position: 640413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:641205-641918:1:exon

position:641205:1
position: 641205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELMO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ELMO3
product: engulfment and cell motility 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_035336591.1
SIO_010081: ELMO3
subclass of: SO_0000673
so part of: ELMO3
location: join(632751..632906,632996..633036,633211..633283,633363..633413,633884..634053,634902..635001,635105..635256,636061..636139,636754..636804,637035..637157,637339..637470,637770..637874,638297..638405,638636..638772,638884..639047,639150..639262,639485..639589,639892..639974,640333..640456,640554..641189)
location: region:632751-641189:1
so has part: feature:632751-632906:1:exon
so has part: feature:632996-633036:1:exon
so has part: feature:633211-633283:1:exon
so has part: feature:633363-633413:1:exon
so has part: feature:633884-634053:1:exon
so has part: feature:634902-635001:1:exon
so has part: feature:635105-635256:1:exon
so has part: feature:636061-636139:1:exon
so has part: feature:636754-636804:1:exon
so has part: feature:637035-637157:1:exon
so has part: feature:637339-637470:1:exon
so has part: feature:637770-637874:1:exon
so has part: feature:638297-638405:1:exon
so has part: feature:638636-638772:1:exon
so has part: feature:638884-639047:1:exon
so has part: feature:639150-639262:1:exon
so has part: feature:639485-639589:1:exon
so has part: feature:639892-639974:1:exon
so has part: feature:640333-640456:1:exon
so has part: feature:640554-641189:1:exon

position:641189:1
position: 641189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632751-632906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632996-633036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633211-633283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633363-633413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633884-634053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634902-635001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635105-635256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636061-636139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636754-636804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637035-637157:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:637339-637470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:637770-637874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638297-638405:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:638636-638772:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:638884-639047:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:639150-639262:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:639485-639589:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:639892-639974:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:640333-640456:1:exon

position:640456:1
position: 640456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:640554-641189:1:exon

position:640554:1
position: 640554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELMO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ELMO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: engulfment and cell motility protein 3 isoform X1
translation: MPPPKDVVKIAIQMVGAIPQLIELQQTKPLASVLKDVCDAWSLPNAERYALQYADGRQTYITESNRGEIKNGSILRLTTSPDQEAERLYNGIQSNNVDVKTDSLKKLASLSQDVTFAQEFINRNGLKLIFHIVEEGNDSGEILAHTLKAFMELMEHDFVSWETLSAAFIKKVVSYVNMNAMDASVQQLSLSILENMVPSSRLLFDLVKKEVTVDRLLTHLQVTNAQLQLKAMALLIALLLAATDAERRDMMEYLREKNIRQFIHKNIIHSSEPLGDEMAHYLYVLQSVSLNLHDRRMRTSMDPYSQEQRELLQSLRQAAFESDSEAPTSNFSTERRRSLCAKEFRKLGFMNNSNPAEDLRRAPPGLLALDNMLYFSRHTPNAYSRFVLENSSREDKHECPFARSSIQLTLILCEILHIGEPCSETAQAFYPMFFGQDHFFEELFCICIQLVNKTWKEMRATQEDFDKVLQVVREQITRTLSLKPTSLELFKTRVNALNYSEILKLRQTERLHQEETLAVPVLELRERLKPELLELIRQQRLLRLCEGTLFRKISSRRRQDKLWYCRLSPNHKVLHYGDVEEGVQAPPIESLPEKIPVADMKALLIGKECPHTKEKSSGKQNKDVLELAFSIVYDVEEYCLNFIAPTRYEFCLWTDGLNVLLGKEMTSERTQTDLDVLLSMELKLRLLDLENISIPDTPPPVPKPPSNLNFCYDFSHAEQ
SIO_010081: ELMO3
subclass of: SO_0000673
so part of: ELMO3
location: join(632829..632906,632996..633036,633211..633283,633363..633413,633884..634053,634902..635001,635105..635256,636061..636139,636754..636804,637035..637157,637339..637470,637770..637874,638297..638405,638636..638772,638884..639047,639150..639262,639485..639589,639892..639974,640333..640413,641205..641417)
location: region:632829-641417:1
so has part: feature:632829-632906:1:exon
so has part: feature:632996-633036:1:exon
so has part: feature:633211-633283:1:exon
so has part: feature:633363-633413:1:exon
so has part: feature:633884-634053:1:exon
so has part: feature:634902-635001:1:exon
so has part: feature:635105-635256:1:exon
so has part: feature:636061-636139:1:exon
so has part: feature:636754-636804:1:exon
so has part: feature:637035-637157:1:exon
so has part: feature:637339-637470:1:exon
so has part: feature:637770-637874:1:exon
so has part: feature:638297-638405:1:exon
so has part: feature:638636-638772:1:exon
so has part: feature:638884-639047:1:exon
so has part: feature:639150-639262:1:exon
so has part: feature:639485-639589:1:exon
so has part: feature:639892-639974:1:exon
so has part: feature:640333-640413:1:exon
so has part: feature:641205-641417:1:exon

XP_035192481.1
type: Protein
SIO_000068: ncbiprotein

position:632829:1
position: 632829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641417:1
position: 641417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632829-632906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632996-633036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633211-633283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633363-633413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633884-634053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634902-635001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635105-635256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636061-636139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636754-636804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637035-637157:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:637339-637470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:637770-637874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638297-638405:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:638636-638772:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:638884-639047:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:639150-639262:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:639485-639589:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:639892-639974:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:640333-640413:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:641205-641417:1:exon

ELMO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ELMO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: engulfment and cell motility protein 3 isoform X2
translation: MPPPKDVVKIAIQMVGAIPQLIELQQTKPLASVLKDVCDAWSLPNAERYALQYADGRQTYITESNRGEIKNGSILRLTTSPDQEAERLYNGIQSNNVDVKTDSLKKLASLSQDVTFAQEFINRNGLKLIFHIVEEGNDSGEILAHTLKAFMELMEHDFVSWETLSAAFIKKVVSYVNMNAMDASVQQLSLSILENMVPSSRLLFDLVKKEVTVDRLLTHLQVTNAQLQLKAMALLIALLLAATDAERRDMMEYLREKNIRQFIHKNIIHSSEPLGDEMAHYLYVLQSVSLNLHDRRMRTSMDPYSQEQRELLQSLRQAAFESDSEAPTSNFSTERRRSLCAKEFRKLGFMNNSNPAEDLRRAPPGLLALDNMLYFSRHTPNAYSRFVLENSSREDKHECPFARSSIQLTLILCEILHIGEPCSETAQAFYPMFFGQDHFFEELFCICIQLVNKTWKEMRATQEDFDKVLQVVREQITRTLSLKPTSLELFKTRVNALNYSEILKLRQTERLHQEETLAVPVLELRERLKPELLELIRQQRLLRLCEGTLFRKISSRRRQDKLWYCRLSPNHKVLHYGDVEEGVQAPPIESLPEKIPVADMKALLIGKECPHTKEKSSGKQNKDVLELAFSIVYDVEEYCLNFIAPTRYEVSSRGHGMASPCQGSSWQHRGEKGLRLLLAVAGLILELDTEG
SIO_010081: ELMO3
subclass of: SO_0000673
so part of: ELMO3
location: join(632829..632906,632996..633036,633211..633283,633363..633413,633884..634053,634902..635001,635105..635256,636061..636139,636754..636804,637035..637157,637339..637470,637770..637874,638297..638405,638636..638772,638884..639047,639150..639262,639485..639589,639892..639974,640333..640456,640554..640639)
location: region:632829-640639:1
so has part: feature:632829-632906:1:exon
so has part: feature:632996-633036:1:exon
so has part: feature:633211-633283:1:exon
so has part: feature:633363-633413:1:exon
so has part: feature:633884-634053:1:exon
so has part: feature:634902-635001:1:exon
so has part: feature:635105-635256:1:exon
so has part: feature:636061-636139:1:exon
so has part: feature:636754-636804:1:exon
so has part: feature:637035-637157:1:exon
so has part: feature:637339-637470:1:exon
so has part: feature:637770-637874:1:exon
so has part: feature:638297-638405:1:exon
so has part: feature:638636-638772:1:exon
so has part: feature:638884-639047:1:exon
so has part: feature:639150-639262:1:exon
so has part: feature:639485-639589:1:exon
so has part: feature:639892-639974:1:exon
so has part: feature:640333-640456:1:exon
so has part: feature:640554-640639:1:exon

XP_035192482.1
type: Protein
SIO_000068: ncbiprotein

position:640639:1
position: 640639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632829-632906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632996-633036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633211-633283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633363-633413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:633884-634053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634902-635001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635105-635256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636061-636139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636754-636804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637035-637157:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:637339-637470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:637770-637874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638297-638405:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:638636-638772:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:638884-639047:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:639150-639262:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:639485-639589:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:639892-639974:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:640333-640456:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:640554-640639:1:exon

ELMO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: ELMO3
product: engulfment and cell motility 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_035336592.1
SIO_010081: ELMO3
subclass of: SO_0000673
so part of: ELMO3
location: join(638297..638405,638680..638772,638884..639047,639150..639262,639485..639589,639892..639974,640333..640413,641205..641918)
location: region:638297-641918:1
so has part: feature:638297-638405:1:exon
so has part: feature:638680-638772:1:exon
so has part: feature:638884-639047:1:exon
so has part: feature:639150-639262:1:exon
so has part: feature:639485-639589:1:exon
so has part: feature:639892-639974:1:exon
so has part: feature:640333-640413:1:exon
so has part: feature:641205-641918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:638297-638405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638680-638772:1:exon

position:638680:1
position: 638680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638884-639047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639150-639262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639485-639589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639892-639974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640333-640413:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:641205-641918:1:exon

ELMO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: ELMO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: engulfment and cell motility protein 3 isoform X3
translation: MRATQEDFDKVLQVVREQITRTLSLKPTSLELFKTRVNALNYSEILKLRQTERLHQEETLAVPVLELRERLKPELLELIRQQRLLRLCEGTLFRKISSRRRQDKLWYCRLSPNHKVLHYGDVEEGVQAPPIESLPEKIPVADMKALLIGKECPHTKEKSSGKQNKDVLELAFSIVYDVEEYCLNFIAPTRYEFCLWTDGLNVLLGKEMTSERTQTDLDVLLSMELKLRLLDLENISIPDTPPPVPKPPSNLNFCYDFSHAEQ
SIO_010081: ELMO3
subclass of: SO_0000673
so part of: ELMO3
location: join(638743..638772,638884..639047,639150..639262,639485..639589,639892..639974,640333..640413,641205..641417)
location: region:638743-641417:1
so has part: feature:638743-638772:1:exon
so has part: feature:638884-639047:1:exon
so has part: feature:639150-639262:1:exon
so has part: feature:639485-639589:1:exon
so has part: feature:639892-639974:1:exon
so has part: feature:640333-640413:1:exon
so has part: feature:641205-641417:1:exon

XP_035192483.1
type: Protein
SIO_000068: ncbiprotein

position:638743:1
position: 638743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638743-638772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638884-639047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639150-639262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639485-639589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639892-639974:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:640333-640413:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:641205-641417:1:exon

TMEM208
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TMEM208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 644730..651389
location: region:644730-651389:1
so has part: feature:644730-651389:1:exon
subclass of: SO_0000010

118172591
type: Gene
SIO_000068: ncbigene

position:644730:1
position: 644730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651389:1
position: 651389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644730-651389:1:exon

TMEM208
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: TMEM208
product: transmembrane protein 208
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_035336616.1
SIO_010081: TMEM208
subclass of: SO_0000673
so part of: TMEM208
location: join(644730..644790,644877..644972,645049..645108,645222..645358,649825..649909,650937..651389)
location: region:644730-651389:1
so has part: feature:644730-644790:1:exon
so has part: feature:644877-644972:1:exon
so has part: feature:645049-645108:1:exon
so has part: feature:645222-645358:1:exon
so has part: feature:649825-649909:1:exon
so has part: feature:650937-651389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644730-644790:1:exon

position:644790:1
position: 644790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:644877-644972:1:exon

position:644877:1
position: 644877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644972:1
position: 644972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645049-645108:1:exon

position:645049:1
position: 645049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645108:1
position: 645108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:645222-645358:1:exon

position:645222:1
position: 645222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645358:1
position: 645358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:649825-649909:1:exon

position:649825:1
position: 649825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649909:1
position: 649909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650937-651389:1:exon

position:650937:1
position: 650937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM208
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: TMEM208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 208
translation: MAPKGKAGTKGKKQILEENRETLRFYLRIILGASAVYAVVNLVIFYPAASAWTWLAFVFSSVVYGTSYRSMNSMAKPSFTDDGSLADGGIDLNMEQGMAEHLKDVILLTAMVQVLSCFSLYVWYFWLLAPGRALYLLWVNILGPWFTAESSAASQEPNEKKQRRQERRQMKRF
SIO_010081: TMEM208
subclass of: SO_0000673
so part of: TMEM208
location: join(644785..644790,644877..644972,645049..645108,645222..645358,649825..649909,650937..651074)
location: region:644785-651074:1
so has part: feature:644785-644790:1:exon
so has part: feature:644877-644972:1:exon
so has part: feature:645049-645108:1:exon
so has part: feature:645222-645358:1:exon
so has part: feature:649825-649909:1:exon
so has part: feature:650937-651074:1:exon

XP_035192507.1
type: Protein
SIO_000068: ncbiprotein

position:644785:1
position: 644785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651074:1
position: 651074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644785-644790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:644877-644972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645049-645108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645222-645358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649825-649909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:650937-651074:1:exon

KIAA0895L
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: KIAA0895L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(652066..669971)
location: region:652066-669971:-1
so has part: feature:652066-669971:-1:exon
subclass of: SO_0000010

118172583
type: Gene
SIO_000068: ncbigene

position:652066:-1
position: 652066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669971:-1
position: 669971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652066-669971:-1:exon

KIAA0895L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: KIAA0895L
product: KIAA0895 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_035336600.1
SIO_010081: KIAA0895L
subclass of: SO_0000673
so part of: KIAA0895L
location: complement(join(652066..652866,653242..653339,653953..654258,654464..654596,664522..664665,669558..669971))
location: region:652066-669971:-1
so has part: feature:669558-669971:-1:exon
so has part: feature:664522-664665:-1:exon
so has part: feature:654464-654596:-1:exon
so has part: feature:653953-654258:-1:exon
so has part: feature:653242-653339:-1:exon
so has part: feature:652066-652866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669558-669971:-1:exon

position:669558:-1
position: 669558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664522-664665:-1:exon

position:664522:-1
position: 664522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664665:-1
position: 664665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654464-654596:-1:exon

position:654464:-1
position: 654464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654596:-1
position: 654596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:653953-654258:-1:exon

position:653953:-1
position: 653953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654258:-1
position: 654258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:653242-653339:-1:exon

position:653242:-1
position: 653242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653339:-1
position: 653339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:652066-652866:-1:exon

position:652866:-1
position: 652866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIAA0895L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: KIAA0895L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA0895-like homolog
translation: MRRSGSTCAVSGGRMRAAASLPHIGRPRGEEGGGGGGGGGGGGRRSPCLLVALRPLNVEAERERFFRARFAYDPQFEYAEPVPEAVLDKYRAASDRFVAQAIRIIHAVLEKYGTYESFEVATGGRLLSKCQIWSVIRKYMQKEGCVGEVVVQLTDDLLSQAVMMVEDSRPTLAINLAGARQYWLEGMLRHEIGTHYIRGVNNTRQPWHSSEGRKQYSLKPANPTEEGLASLHSVLFRKQPFLWRAALLYYTIERASRLSFSALFQDLEQYVQDAGVRWEYCVRAKRGQTDTSQPGCFSKDQVYLDGILRILRHRQTIDFPLLAALGKVSYEDVNRLKKFGVLEKARIPHFMQDLERYMKQLDHIVTTNQLNEQELEELLPD
SIO_010081: KIAA0895L
subclass of: SO_0000673
so part of: KIAA0895L
location: complement(join(652702..652866,653242..653339,653953..654258,654464..654596,664522..664665,669558..669857))
location: region:652702-669857:-1
so has part: feature:669558-669857:-1:exon
so has part: feature:664522-664665:-1:exon
so has part: feature:654464-654596:-1:exon
so has part: feature:653953-654258:-1:exon
so has part: feature:653242-653339:-1:exon
so has part: feature:652702-652866:-1:exon

XP_035192491.1
type: Protein
SIO_000068: ncbiprotein

position:652702:-1
position: 652702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669857:-1
position: 669857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669558-669857:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664522-664665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654464-654596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653953-654258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653242-653339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:652702-652866:-1:exon

LOC118172593
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(656343..663960)
location: region:656343-663960:-1
so has part: feature:656343-663960:-1:exon
subclass of: SO_0000011

118172593
type: Gene
SIO_000068: ncbigene

position:656343:-1
position: 656343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663960:-1
position: 663960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656343-663960:-1:exon

LOC118172593
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118172593
product: uncharacterized LOC118172593
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XR_004753763.1
SIO_010081: LOC118172593
subclass of: SO_0000673
so part of: LOC118172593
location: complement(join(656343..657198,660507..663960))
location: region:656343-663960:-1
so has part: feature:660507-663960:-1:exon
so has part: feature:656343-657198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660507-663960:-1:exon

position:660507:-1
position: 660507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656343-657198:-1:exon

position:657198:-1
position: 657198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LCAT
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LCAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(671207..678181)
location: region:671207-678181:-1
so has part: feature:671207-678181:-1:exon
subclass of: SO_0000010

118172581
type: Gene
SIO_000068: ncbigene

position:671207:-1
position: 671207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678181:-1
position: 678181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671207-678181:-1:exon

LCAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LCAT
product: lecithin-cholesterol acyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_035336598.1
SIO_010081: LCAT
subclass of: SO_0000673
so part of: LCAT
location: complement(join(671207..672373,673561..673785,674070..674165,674563..674678,675154..675310,677969..678181))
location: region:671207-678181:-1
so has part: feature:677969-678181:-1:exon
so has part: feature:675154-675310:-1:exon
so has part: feature:674563-674678:-1:exon
so has part: feature:674070-674165:-1:exon
so has part: feature:673561-673785:-1:exon
so has part: feature:671207-672373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677969-678181:-1:exon

position:677969:-1
position: 677969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675154-675310:-1:exon

position:675154:-1
position: 675154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675310:-1
position: 675310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674563-674678:-1:exon

position:674563:-1
position: 674563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674678:-1
position: 674678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:674070-674165:-1:exon

position:674070:-1
position: 674070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674165:-1
position: 674165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:673561-673785:-1:exon

position:673561:-1
position: 673561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673785:-1
position: 673785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:671207-672373:-1:exon

position:672373:-1
position: 672373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LCAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LCAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine-sterol acyltransferase
translation: MGRTGAGFALLTLLLLPQPASQFWLFNVLFPPTSTPEAPPTNSTPPVVLVPGCLGNQLEAKLDKPDVVNWMCYRKTEDYFTIWLNLNTFLPVGVDCWIDNTRVVYNRTSRKMSNAPGVHIRVPGFGKTYSVEYLDQSKLAGYLHTLVQNLVNNGYVRDQTVRAAPYDWRVGPQEQPEYFQNLKALIEEMHDEYQQRVFLIAHSMGNLNVLYFLLQQRQAWKDQYIGGFISLGAPWGGSVKPLRVLASGDNQGIPLMSNIKLREEQRMTTTSPWMFPTSLAWPEDHIFISTPSYNYTYRDYKQFFTDVNLEDGWYMWEDMKDLLKGLPPPGVDTYCLYGTGYPTVETYIYDEHFPYEDPVDMIYGDGDDTVNRRSSELCKRWRNQQKQKVHIQELRGIDHLNMVFSNLTLSSINEILLGSSQVGAGTKEQGEPGQMGALRSSPEVGRRGKN
SIO_010081: LCAT
subclass of: SO_0000673
so part of: LCAT
location: complement(join(671763..672373,673561..673785,674070..674165,674563..674678,675154..675310,677969..678116))
location: region:671763-678116:-1
so has part: feature:677969-678116:-1:exon
so has part: feature:675154-675310:-1:exon
so has part: feature:674563-674678:-1:exon
so has part: feature:674070-674165:-1:exon
so has part: feature:673561-673785:-1:exon
so has part: feature:671763-672373:-1:exon

XP_035192489.1
type: Protein
SIO_000068: ncbiprotein

position:671763:-1
position: 671763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678116:-1
position: 678116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677969-678116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675154-675310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674563-674678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674070-674165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673561-673785:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671763-672373:-1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAH-GUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(678474..678545)
location: region:678474-678545:-1
so has part: feature:678474-678545:-1:exon
subclass of: SO_0000663

118173018
type: Gene
SIO_000068: ncbigene

position:678474:-1
position: 678474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678545:-1
position: 678545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678474-678545:-1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(678510..678512),aa:His,seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: complement(678474..678545)
location: region:678474-678545:-1
so has part: feature:678474-678545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678474-678545:-1:exon

TRNAK-UUU
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: TRNAK-UUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 678953..679025
location: region:678953-679025:1
so has part: feature:678953-679025:1:exon
subclass of: SO_0000663

118173026
type: Gene
SIO_000068: ncbigene

position:678953:1
position: 678953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679025:1
position: 679025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678953-679025:1:exon

TRNAK-UUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8884
gene: TRNAK-UUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:678986..678988,aa:Lys,seq:ttt)
SIO_010081: TRNAK-UUU
subclass of: SO_0000673
so part of: TRNAK-UUU
location: 678953..679025
location: region:678953-679025:1
so has part: feature:678953-679025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678953-679025:1:exon

LOC118172588
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(684641..693873)
location: region:684641-693873:-1
so has part: feature:684641-693873:-1:exon
subclass of: SO_0000010

118172588
type: Gene
SIO_000068: ncbigene

position:684641:-1
position: 684641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693873:-1
position: 693873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684641-693873:-1:exon

LOC118172588
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172588
product: C-factor-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_035336609.1
SIO_010081: LOC118172588
subclass of: SO_0000673
so part of: LOC118172588
location: complement(join(684641..684814,691295..691342,691651..691764,692065..692223,692883..693070,693252..693303,693712..693873))
location: region:684641-693873:-1
so has part: feature:693712-693873:-1:exon
so has part: feature:693252-693303:-1:exon
so has part: feature:692883-693070:-1:exon
so has part: feature:692065-692223:-1:exon
so has part: feature:691651-691764:-1:exon
so has part: feature:691295-691342:-1:exon
so has part: feature:684641-684814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693712-693873:-1:exon

position:693712:-1
position: 693712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693252-693303:-1:exon

position:693252:-1
position: 693252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693303:-1
position: 693303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:692883-693070:-1:exon

position:692883:-1
position: 692883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693070:-1
position: 693070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:692065-692223:-1:exon

position:692065:-1
position: 692065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692223:-1
position: 692223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:691651-691764:-1:exon

position:691651:-1
position: 691651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691764:-1
position: 691764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:691295-691342:-1:exon

position:691295:-1
position: 691295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691342:-1
position: 691342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:684641-684814:-1:exon

position:684814:-1
position: 684814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118172588
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172588
product: C-factor-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_035336608.1
SIO_010081: LOC118172588
subclass of: SO_0000673
so part of: LOC118172588
location: complement(join(684641..684814,691295..691336,691645..691764,692065..692223,692883..693070,693252..693303,693712..693873))
location: region:684641-693873:-1
so has part: feature:693712-693873:-1:exon
so has part: feature:693252-693303:-1:exon
so has part: feature:692883-693070:-1:exon
so has part: feature:692065-692223:-1:exon
so has part: feature:691645-691764:-1:exon
so has part: feature:691295-691336:-1:exon
so has part: feature:684641-684814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693712-693873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693252-693303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692883-693070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692065-692223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691645-691764:-1:exon

position:691645:-1
position: 691645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:691295-691336:-1:exon

position:691336:-1
position: 691336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:684641-684814:-1:exon

LOC118172588
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172588
product: C-factor-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_035336607.1
SIO_010081: LOC118172588
subclass of: SO_0000673
so part of: LOC118172588
location: complement(join(684641..684856,685153..685272,685557..685715,686000..686187,686332..686383,686747..686908))
location: region:684641-686908:-1
so has part: feature:686747-686908:-1:exon
so has part: feature:686332-686383:-1:exon
so has part: feature:686000-686187:-1:exon
so has part: feature:685557-685715:-1:exon
so has part: feature:685153-685272:-1:exon
so has part: feature:684641-684856:-1:exon

position:686908:-1
position: 686908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686747-686908:-1:exon

position:686747:-1
position: 686747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686332-686383:-1:exon

position:686332:-1
position: 686332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686383:-1
position: 686383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:686000-686187:-1:exon

position:686000:-1
position: 686000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686187:-1
position: 686187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:685557-685715:-1:exon

position:685557:-1
position: 685557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685715:-1
position: 685715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:685153-685272:-1:exon

position:685153:-1
position: 685153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685272:-1
position: 685272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:684641-684856:-1:exon

position:684856:-1
position: 684856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118172588
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172588
product: C-factor-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_035336611.1
SIO_010081: LOC118172588
subclass of: SO_0000673
so part of: LOC118172588
location: complement(join(684647..684814,691295..691360,691568..691764,692065..692223,692883..693070,693252..693303,693712..693873))
location: region:684647-693873:-1
so has part: feature:693712-693873:-1:exon
so has part: feature:693252-693303:-1:exon
so has part: feature:692883-693070:-1:exon
so has part: feature:692065-692223:-1:exon
so has part: feature:691568-691764:-1:exon
so has part: feature:691295-691360:-1:exon
so has part: feature:684647-684814:-1:exon

position:684647:-1
position: 684647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693712-693873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693252-693303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692883-693070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692065-692223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691568-691764:-1:exon

position:691568:-1
position: 691568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:691295-691360:-1:exon

position:691360:-1
position: 691360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:684647-684814:-1:exon

LOC118172588
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-factor-like isoform X3
translation: MGELHVRSVLVTGANRGIGLGFVRHLLGLPNPPEWVFAACRDPKGQRAQELQNLASKHPNLVLVPLEVTKPASIKAAAASVEEHLKGSGLNLLINNAGMLVYKTLDTETQEDMSQVYATNTIGPLLMSQAFLPLLKKAAQGSPGSGLSCSKAAIINISSIGGSIKEVYLWKSVQCVSYRCSKAALNMLTKCQSLGYQEHGILCAALHPGWVQTDMGSAAGLQPPVTVDESVGGMLKVISSLSEKDTGTFLDWEGKVVPW
SIO_010081: LOC118172588
subclass of: SO_0000673
so part of: LOC118172588
location: complement(join(684743..684814,691295..691342,691651..691764,692065..692223,692883..693070,693252..693303,693712..693858))
location: region:684743-693858:-1
so has part: feature:693712-693858:-1:exon
so has part: feature:693252-693303:-1:exon
so has part: feature:692883-693070:-1:exon
so has part: feature:692065-692223:-1:exon
so has part: feature:691651-691764:-1:exon
so has part: feature:691295-691342:-1:exon
so has part: feature:684743-684814:-1:exon

XP_035192500.1
type: Protein
SIO_000068: ncbiprotein

position:684743:-1
position: 684743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693858:-1
position: 693858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693712-693858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693252-693303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692883-693070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692065-692223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691651-691764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:691295-691342:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:684743-684814:-1:exon

LOC118172588
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-factor-like isoform X2
translation: MGELHVRSVLVTGANRGIGLGFVRHLLGLPNPPEWVFAACRDPKGQRAQELQNLASKHPNLVLVPLEVTKPASIKAAAASVEEHLKGSGLNLLINNAGMLVYKTLDTETQEDMSQVYATNTIGPLLMSQAFLPLLKKAAQGSPGSGLSCSKAAIINISSIGGSIKEVYLWKSVQCVSYRCSKAALNMLTKCQSLGYQEHGILCAALHPGWVQTDMGSAAGHTPPVTVDESVGGMLKVISSLSEKDTGTFLDWEGKVVPW
SIO_010081: LOC118172588
subclass of: SO_0000673
so part of: LOC118172588
location: complement(join(684743..684814,691295..691336,691645..691764,692065..692223,692883..693070,693252..693303,693712..693858))
location: region:684743-693858:-1
so has part: feature:693712-693858:-1:exon
so has part: feature:693252-693303:-1:exon
so has part: feature:692883-693070:-1:exon
so has part: feature:692065-692223:-1:exon
so has part: feature:691645-691764:-1:exon
so has part: feature:691295-691336:-1:exon
so has part: feature:684743-684814:-1:exon

XP_035192499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:693712-693858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693252-693303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692883-693070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692065-692223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691645-691764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:691295-691336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:684743-684814:-1:exon

LOC118172588
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-factor-like isoform X1
translation: MGELHVRSVLVTGANRGIGLGFVRHLLGLPNPPEWVFAACRDPKGQRAQELQNLASKHPNLVIIPLEVTKPASIKAAAASVEEHLKGSGLNLLINNAGIGNNSSLDNVTQEGMYQMYATNTIGPLLLSQAFLPLLKKAAHESPGSGLSCSKAAIINMSSYAGSIQDVYLWEYGQALSYRCSKAALNMLTKCQSLGYQEHGILCAALHPGWVQTDMGGTIEDKTRVTVDVSVRGMLKVISSLSEKDTGTFLDWEGKVVPW
SIO_010081: LOC118172588
subclass of: SO_0000673
so part of: LOC118172588
location: complement(join(684743..684856,685153..685272,685557..685715,686000..686187,686332..686383,686747..686893))
location: region:684743-686893:-1
so has part: feature:686747-686893:-1:exon
so has part: feature:686332-686383:-1:exon
so has part: feature:686000-686187:-1:exon
so has part: feature:685557-685715:-1:exon
so has part: feature:685153-685272:-1:exon
so has part: feature:684743-684856:-1:exon

XP_035192498.1
type: Protein
SIO_000068: ncbiprotein

position:686893:-1
position: 686893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686747-686893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686332-686383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:686000-686187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:685557-685715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685153-685272:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:684743-684856:-1:exon

LOC118172585
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 688145..710660
location: region:688145-710660:1
so has part: feature:688145-710660:1:exon
subclass of: SO_0000010

118172585
type: Gene
SIO_000068: ncbigene

position:688145:1
position: 688145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710660:1
position: 710660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688145-710660:1:exon

LOC118172585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172585
product: uncharacterized LOC118172585, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_035336603.1
SIO_010081: LOC118172585
subclass of: SO_0000673
so part of: LOC118172585
location: join(688145..688471,689118..689611,706479..706483,710255..710660)
location: region:688145-710660:1
so has part: feature:688145-688471:1:exon
so has part: feature:689118-689611:1:exon
so has part: feature:706479-706483:1:exon
so has part: feature:710255-710660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688145-688471:1:exon

position:688471:1
position: 688471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:689118-689611:1:exon

position:689118:1
position: 689118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689611:1
position: 689611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:706479-706483:1:exon

position:706479:1
position: 706479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706483:1
position: 706483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:710255-710660:1:exon

position:710255:1
position: 710255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118172585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172585
product: uncharacterized LOC118172585, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_035336604.1
SIO_010081: LOC118172585
subclass of: SO_0000673
so part of: LOC118172585
location: join(688145..688471,689118..689598,690101..690460)
location: region:688145-690460:1
so has part: feature:688145-688471:1:exon
so has part: feature:689118-689598:1:exon
so has part: feature:690101-690460:1:exon

position:690460:1
position: 690460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688145-688471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689118-689598:1:exon

position:689598:1
position: 689598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690101-690460:1:exon

position:690101:1
position: 690101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118172585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118172585 isoform X1
translation: MDFGKKGKQHRRTVKLWSVCAGRKLADEGNVVDVVYVDFSQVFATTSHSILLEKLAAQGSDGRTARWLQNWLKGSQGMGFNWWPVTSGVPWGSVLGPVLFHSFSSDREEGMECSLTKLTGDTKVGGTVKLLEGRKALQRDLDRLGQWAESNLKTSNKGKCRVLCVGPNNSVQRHRPGEEWLGSCPSRKGLPREVALGRSLASPVCYYRIKLLFKAEPALSGLHTIREHRLFPAAPILFLCSLRATTLPAPGAARGARMGGSEEVLGGFSSHPARAESKEDGLSMSRRALLSLGCVGKQKQKS
SIO_010081: LOC118172585
subclass of: SO_0000673
so part of: LOC118172585
location: join(688400..688471,689118..689611,706479..706483,710255..710592)
location: region:688400-710592:1
so has part: feature:688400-688471:1:exon
so has part: feature:689118-689611:1:exon
so has part: feature:706479-706483:1:exon
so has part: feature:710255-710592:1:exon

XP_035192494.1
type: Protein
SIO_000068: ncbiprotein

position:688400:1
position: 688400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710592:1
position: 710592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688400-688471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689118-689611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706479-706483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710255-710592:1:exon

LOC118172585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118172585 isoform X2
translation: MDFGKKGKQHRRTVKLWSVCAGRKLADEGNVVDVVYVDFSQVFATTSHSILLEKLAAQGSDGRTARWLQNWLKGSQGMGFNWWPVTSGVPWGSVLGPVLFHSFSSDREEGMECSLTKLTGDTKVGGTVKLLEGRKALQRDLDRLGQWAESNLKTSNKGKCRVLCVGPNNSVQRHRPGEEWLGSCPRIGTGRLEKWWISHPRRYLRDIGSWH
SIO_010081: LOC118172585
subclass of: SO_0000673
so part of: LOC118172585
location: join(688400..688471,689118..689598,690101..690183)
location: region:688400-690183:1
so has part: feature:688400-688471:1:exon
so has part: feature:689118-689598:1:exon
so has part: feature:690101-690183:1:exon

XP_035192495.1
type: Protein
SIO_000068: ncbiprotein

position:690183:1
position: 690183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688400-688471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689118-689598:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690101-690183:1:exon

LOC118172588
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: estradiol 17-beta-dehydrogenase 2-like isoform X4
translation: MGELHVRSVLVTGANRGIGLGFVRHLLGLPNPPEWVFAACRDPKGQRAQELQNLASKHPNLVLVPLEVTKPASIKAAAASVEEHLKGSGLNLLINNAGMLVYKTLDTETQEDMSQVYATNTIGPLLMSQAFLPLLKKAAQGSPGSGLSCSKAAIINISSIGGSIKEVYLWKSVQCVSYRCSKAALNMLTKCQSLGYQEHGILCAALHPGWVQTDMGSAAGHTVGALPRQVHPSPCAGFPWEAVVTPSYMFFLCPCSPP
SIO_010081: LOC118172588
subclass of: SO_0000673
so part of: LOC118172588
location: complement(join(691327..691360,691568..691764,692065..692223,692883..693070,693252..693303,693712..693858))
location: region:691327-693858:-1
so has part: feature:693712-693858:-1:exon
so has part: feature:693252-693303:-1:exon
so has part: feature:692883-693070:-1:exon
so has part: feature:692065-692223:-1:exon
so has part: feature:691568-691764:-1:exon
so has part: feature:691327-691360:-1:exon

XP_035192502.1
type: Protein
SIO_000068: ncbiprotein

position:691327:-1
position: 691327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693712-693858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693252-693303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692883-693070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692065-692223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691568-691764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:691327-691360:-1:exon

LOC118172592
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(695024..695639)
location: region:695024-695639:-1
so has part: feature:695024-695639:-1:exon
subclass of: SO_0000011

118172592
type: Gene
SIO_000068: ncbigene

position:695024:-1
position: 695024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695639:-1
position: 695639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695024-695639:-1:exon

LOC118172592
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118172592
product: uncharacterized LOC118172592
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_004753762.1
SIO_010081: LOC118172592
subclass of: SO_0000673
so part of: LOC118172592
location: complement(join(695024..695111,695482..695639))
location: region:695024-695639:-1
so has part: feature:695482-695639:-1:exon
so has part: feature:695024-695111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695482-695639:-1:exon

position:695482:-1
position: 695482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:695024-695111:-1:exon

position:695111:-1
position: 695111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118172590
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 699779..705137
location: region:699779-705137:1
so has part: feature:699779-705137:1:exon
subclass of: SO_0000010

118172590
type: Gene
SIO_000068: ncbigene

position:699779:1
position: 699779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705137:1
position: 705137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699779-705137:1:exon

LOC118172590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172590
product: C-factor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_035336615.1
SIO_010081: LOC118172590
subclass of: SO_0000673
so part of: LOC118172590
location: join(699779..700047,702499..702550,703214..703401,703710..703868,704154..704264,704855..705137)
location: region:699779-705137:1
so has part: feature:699779-700047:1:exon
so has part: feature:702499-702550:1:exon
so has part: feature:703214-703401:1:exon
so has part: feature:703710-703868:1:exon
so has part: feature:704154-704264:1:exon
so has part: feature:704855-705137:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699779-700047:1:exon

position:700047:1
position: 700047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702499-702550:1:exon

position:702499:1
position: 702499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702550:1
position: 702550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:703214-703401:1:exon

position:703214:1
position: 703214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703401:1
position: 703401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:703710-703868:1:exon

position:703710:1
position: 703710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703868:1
position: 703868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:704154-704264:1:exon

position:704154:1
position: 704154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704264:1
position: 704264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:704855-705137:1:exon

position:704855:1
position: 704855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118172590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-factor-like
translation: MAALRARTVLLTGSNRGIGLELVKQLLGGPRPPAWIFATCRDPEGPRAQELRDLASRHPNLVLVKLDVANPSAIADAAKIVEGKLNGAGLNLLINNAGIYAQVSLETVDSEEMIRTYKTNAVGPLLMAQAFLPLLKKAARNSTEKGLSCSKAAIINISTVMGSIEKTSESFCKPVISYRCSKAALNMLTKCQALTYGEAGILCVALHPGWVKTDMGTQEADLTVDTSVRGLLSVLPVLSEKHSGNLLNWEGKVIPW
SIO_010081: LOC118172590
subclass of: SO_0000673
so part of: LOC118172590
location: join(699901..700047,702499..702550,703214..703401,703710..703868,704154..704264,704855..704968)
location: region:699901-704968:1
so has part: feature:699901-700047:1:exon
so has part: feature:702499-702550:1:exon
so has part: feature:703214-703401:1:exon
so has part: feature:703710-703868:1:exon
so has part: feature:704154-704264:1:exon
so has part: feature:704855-704968:1:exon

XP_035192506.1
type: Protein
SIO_000068: ncbiprotein

position:699901:1
position: 699901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704968:1
position: 704968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699901-700047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702499-702550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703214-703401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703710-703868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704154-704264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704855-704968:1:exon

RIPOR1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: RIPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 708159..735128
location: region:708159-735128:1
so has part: feature:708159-735128:1:exon
subclass of: SO_0000010

118172575
type: Gene
SIO_000068: ncbigene

position:708159:1
position: 708159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735128:1
position: 735128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708159-735128:1:exon

RIPOR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RIPOR1
product: RHO family interacting cell polarization regulator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_035336584.1
SIO_010081: RIPOR1
subclass of: SO_0000673
so part of: RIPOR1
location: join(708159..708392,709395..709502,723304..723430,725713..725862,726235..726313,726560..726583,726832..726885,727056..727208,727292..727355,727430..727473,727665..727790,728115..728263,728492..728621,729436..730257,730410..730549,730906..731080,731242..731377,731457..731618,731707..731865,732234..732430,732513..732596,733009..733099,734159..735128)
location: region:708159-735128:1
so has part: feature:708159-708392:1:exon
so has part: feature:709395-709502:1:exon
so has part: feature:723304-723430:1:exon
so has part: feature:725713-725862:1:exon
so has part: feature:726235-726313:1:exon
so has part: feature:726560-726583:1:exon
so has part: feature:726832-726885:1:exon
so has part: feature:727056-727208:1:exon
so has part: feature:727292-727355:1:exon
so has part: feature:727430-727473:1:exon
so has part: feature:727665-727790:1:exon
so has part: feature:728115-728263:1:exon
so has part: feature:728492-728621:1:exon
so has part: feature:729436-730257:1:exon
so has part: feature:730410-730549:1:exon
so has part: feature:730906-731080:1:exon
so has part: feature:731242-731377:1:exon
so has part: feature:731457-731618:1:exon
so has part: feature:731707-731865:1:exon
so has part: feature:732234-732430:1:exon
so has part: feature:732513-732596:1:exon
so has part: feature:733009-733099:1:exon
so has part: feature:734159-735128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708159-708392:1:exon

position:708392:1
position: 708392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709395-709502:1:exon

position:709395:1
position: 709395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709502:1
position: 709502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723304-723430:1:exon

position:723304:1
position: 723304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723430:1
position: 723430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:725713-725862:1:exon

position:725713:1
position: 725713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725862:1
position: 725862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:726235-726313:1:exon

position:726235:1
position: 726235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726313:1
position: 726313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:726560-726583:1:exon

position:726560:1
position: 726560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726583:1
position: 726583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:726832-726885:1:exon

position:726832:1
position: 726832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726885:1
position: 726885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:727056-727208:1:exon

position:727056:1
position: 727056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727208:1
position: 727208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:727292-727355:1:exon

position:727292:1
position: 727292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727355:1
position: 727355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:727430-727473:1:exon

position:727430:1
position: 727430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727473:1
position: 727473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:727665-727790:1:exon

position:727665:1
position: 727665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727790:1
position: 727790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:728115-728263:1:exon

position:728115:1
position: 728115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728263:1
position: 728263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:728492-728621:1:exon

position:728492:1
position: 728492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728621:1
position: 728621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:729436-730257:1:exon

position:729436:1
position: 729436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730257:1
position: 730257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:730410-730549:1:exon

position:730410:1
position: 730410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730549:1
position: 730549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:730906-731080:1:exon

position:730906:1
position: 730906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731080:1
position: 731080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:731242-731377:1:exon

position:731242:1
position: 731242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731377:1
position: 731377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:731457-731618:1:exon

position:731457:1
position: 731457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731618:1
position: 731618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:731707-731865:1:exon

position:731707:1
position: 731707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731865:1
position: 731865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:732234-732430:1:exon

position:732234:1
position: 732234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732430:1
position: 732430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:732513-732596:1:exon

position:732513:1
position: 732513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732596:1
position: 732596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:733009-733099:1:exon

position:733009:1
position: 733009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733099:1
position: 733099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:734159-735128:1:exon

position:734159:1
position: 734159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RIPOR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RIPOR1
product: RHO family interacting cell polarization regulator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_035336583.1
SIO_010081: RIPOR1
subclass of: SO_0000673
so part of: RIPOR1
location: join(715124..715344,723304..723430,725713..725862,726235..726313,726560..726583,726832..726885,727056..727208,727292..727355,727430..727473,727665..727790,728115..728263,728492..728621,729436..730257,730410..730549,730906..731080,731242..731377,731457..731618,731707..731865,732234..732430,732513..732596,733009..733099,733343..733406,734159..735128)
location: region:715124-735128:1
so has part: feature:715124-715344:1:exon
so has part: feature:723304-723430:1:exon
so has part: feature:725713-725862:1:exon
so has part: feature:726235-726313:1:exon
so has part: feature:726560-726583:1:exon
so has part: feature:726832-726885:1:exon
so has part: feature:727056-727208:1:exon
so has part: feature:727292-727355:1:exon
so has part: feature:727430-727473:1:exon
so has part: feature:727665-727790:1:exon
so has part: feature:728115-728263:1:exon
so has part: feature:728492-728621:1:exon
so has part: feature:729436-730257:1:exon
so has part: feature:730410-730549:1:exon
so has part: feature:730906-731080:1:exon
so has part: feature:731242-731377:1:exon
so has part: feature:731457-731618:1:exon
so has part: feature:731707-731865:1:exon
so has part: feature:732234-732430:1:exon
so has part: feature:732513-732596:1:exon
so has part: feature:733009-733099:1:exon
so has part: feature:733343-733406:1:exon
so has part: feature:734159-735128:1:exon

position:715124:1
position: 715124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715124-715344:1:exon

position:715344:1
position: 715344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723304-723430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725713-725862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726235-726313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726560-726583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726832-726885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727056-727208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727292-727355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727430-727473:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727665-727790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728115-728263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728492-728621:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729436-730257:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730410-730549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:730906-731080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:731242-731377:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:731457-731618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:731707-731865:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:732234-732430:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:732513-732596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:733009-733099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:733343-733406:1:exon

position:733343:1
position: 733343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733406:1
position: 733406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:734159-735128:1:exon

RIPOR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RIPOR1
product: RHO family interacting cell polarization regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_035336581.1
SIO_010081: RIPOR1
subclass of: SO_0000673
so part of: RIPOR1
location: join(715124..715344,723304..723430,725713..725862,726235..726313,726560..726583,726832..726885,727056..727208,727292..727355,727430..727473,727665..727790,728115..728263,728492..728621,729436..730257,730410..730549,730906..731080,731242..731377,731457..731618,731707..731865,732234..732430,732513..732596,733009..733099,734159..735128)
location: region:715124-735128:1
so has part: feature:715124-715344:1:exon
so has part: feature:723304-723430:1:exon
so has part: feature:725713-725862:1:exon
so has part: feature:726235-726313:1:exon
so has part: feature:726560-726583:1:exon
so has part: feature:726832-726885:1:exon
so has part: feature:727056-727208:1:exon
so has part: feature:727292-727355:1:exon
so has part: feature:727430-727473:1:exon
so has part: feature:727665-727790:1:exon
so has part: feature:728115-728263:1:exon
so has part: feature:728492-728621:1:exon
so has part: feature:729436-730257:1:exon
so has part: feature:730410-730549:1:exon
so has part: feature:730906-731080:1:exon
so has part: feature:731242-731377:1:exon
so has part: feature:731457-731618:1:exon
so has part: feature:731707-731865:1:exon
so has part: feature:732234-732430:1:exon
so has part: feature:732513-732596:1:exon
so has part: feature:733009-733099:1:exon
so has part: feature:734159-735128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715124-715344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723304-723430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725713-725862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726235-726313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726560-726583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726832-726885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727056-727208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727292-727355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727430-727473:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727665-727790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728115-728263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728492-728621:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729436-730257:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730410-730549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:730906-731080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:731242-731377:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:731457-731618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:731707-731865:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:732234-732430:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:732513-732596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:733009-733099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:734159-735128:1:exon

RIPOR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RIPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho family-interacting cell polarization regulator 1 isoform X1
translation: MGEEQRRCAQPGLLSPPAPSPASPGTWRPSRSHSTMSLSARPQRRVLVAKINRSQSFAGVNSTADRPFRNLSPFTPTVSRKTGSRVSRMFSMSHKSPPPKVPQPNRLDEVYEALKKGLTAYLEVHQLELEKLSTQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKIDELYEAYCIQRRLRDGAHNMVKAYSTGSPGSREARESLAEASKGYKEYTENMCLLESELESQLGEFHVRMKGLAGFARLCAGDQYEIFMKYGRQRWKLRGRIEVNSKQVWDSEEMVFLPLITEFLSIKVTELKSLANHVVVGNVSCETKDLFAALPQVVAVDINDLGTLKLSLEVTWNPFDKDDQPSAASSVNKASTVNKRFSTYNQSPPDTPSLREQAFYNMLRRQEELENGTAWSISSESSDDSSSPQLSGSARHAAKPIVQPEVQASAPAIEISFSQQQEEAGAGGGVPAGPALPEHPEEQGGRKKDPVANGHVPYARTLSHISEASVDASMETKAVESLWEPSPSPEDPGAGEPDADSIPGASNSVPEAWAGQDSGPEAKPRAMVAWAETCETEAKPAASPAPSPAPAQEVCGSEAPAQAAVQAQAPAEEEPVLTPHLAASPPAVPRVKAVDSGLEEAISLLASALDDYRGQFPELQPLERELKHLEEILLHKQGVFLSRASSISLTVEHALESFSFLNTSDMEDSEGSEEDALQDERRASRARRGSRAPSAGEVGADDAGTCSGSDGSADPMSTGNEFLDKALVLHLHNCNRLLLKLGTFGPLRCHEMYALDRLLREAQVLEIVCQLTEERLEAATSAAGVVQFSTRKEGVLPLWDRCVELPNVYTCPVERFLQVLGAQYAAPINERHPGLADAVCVKLVEDVLNRRLPRRPGGTQGEQVTIFQYWSHFESLGALVLDTYVMELAEEVLLAQNLNSDDQDVVLRALKRVPEGRLKKEGLKALSLLLVEGNSKVVSAVSAQLRSLAENPRFRQRALVCYLDQLEDEEVQTRVAGCAALGCLKAKESIEQLVYLCQTDKEPVREAAKQSLMLCGEDGKSAHRRLEETLDSLPRIFAPASMASTAF
SIO_010081: RIPOR1
subclass of: SO_0000673
so part of: RIPOR1
location: join(715266..715344,723304..723430,725713..725862,726235..726313,726560..726583,726832..726885,727056..727208,727292..727355,727430..727473,727665..727790,728115..728263,728492..728621,729436..730257,730410..730549,730906..731080,731242..731377,731457..731618,731707..731865,732234..732430,732513..732596,733009..733099,734159..734256)
location: region:715266-734256:1
so has part: feature:715266-715344:1:exon
so has part: feature:723304-723430:1:exon
so has part: feature:725713-725862:1:exon
so has part: feature:726235-726313:1:exon
so has part: feature:726560-726583:1:exon
so has part: feature:726832-726885:1:exon
so has part: feature:727056-727208:1:exon
so has part: feature:727292-727355:1:exon
so has part: feature:727430-727473:1:exon
so has part: feature:727665-727790:1:exon
so has part: feature:728115-728263:1:exon
so has part: feature:728492-728621:1:exon
so has part: feature:729436-730257:1:exon
so has part: feature:730410-730549:1:exon
so has part: feature:730906-731080:1:exon
so has part: feature:731242-731377:1:exon
so has part: feature:731457-731618:1:exon
so has part: feature:731707-731865:1:exon
so has part: feature:732234-732430:1:exon
so has part: feature:732513-732596:1:exon
so has part: feature:733009-733099:1:exon
so has part: feature:734159-734256:1:exon

XP_035192472.1
type: Protein
SIO_000068: ncbiprotein

position:715266:1
position: 715266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734256:1
position: 734256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715266-715344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723304-723430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725713-725862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726235-726313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726560-726583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726832-726885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727056-727208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727292-727355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727430-727473:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727665-727790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728115-728263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728492-728621:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729436-730257:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730410-730549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:730906-731080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:731242-731377:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:731457-731618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:731707-731865:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:732234-732430:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:732513-732596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:733009-733099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:734159-734256:1:exon

RIPOR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RIPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho family-interacting cell polarization regulator 1 isoform X3
translation: MGEEQRRCAQPGLLSPPAPSPASPGTWRPSRSHSTMSLSARPQRRVLVAKINRSQSFAGVNSTADRPFRNLSPFTPTVSRKTGSRVSRMFSMSHKSPPPKVPQPNRLDEVYEALKKGLTAYLEVHQLELEKLSTQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKIDELYEAYCIQRRLRDGAHNMVKAYSTGSPGSREARESLAEASKGYKEYTENMCLLESELESQLGEFHVRMKGLAGFARLCAGDQYEIFMKYGRQRWKLRGRIEVNSKQVWDSEEMVFLPLITEFLSIKVTELKSLANHVVVGNVSCETKDLFAALPQVVAVDINDLGTLKLSLEVTWNPFDKDDQPSAASSVNKASTVNKRFSTYNQSPPDTPSLREQAFYNMLRRQEELENGTAWSISSESSDDSSSPQLSGSARHAAKPIVQPEVQASAPAIEISFSQQQEEAGAGGGVPAGPALPEHPEEQGGRKKDPVANGHVPYARTLSHISEASVDASMETKAVESLWEPSPSPEDPGAGEPDADSIPGASNSVPEAWAGQDSGPEAKPRAMVAWAETCETEAKPAASPAPSPAPAQEVCGSEAPAQAAVQAQAPAEEEPVLTPHLAASPPAVPRVKAVDSGLEEAISLLASALDDYRGQFPELQPLERELKHLEEILLHKQGVFLSRASSISLTVEHALESFSFLNTSDMEDSEGSEEDALQDERRASRARRGSRAPSAGEVGADDAGTCSGSDGSADPMSTGNEFLDKALVLHLHNCNRLLLKLGTFGPLRCHEMYALDRLLREAQVLEIVCQLTEERLEAATSAAGVVQFSTRKEGVLPLWDRCVELPNVYTCPVERFLQVLGAQYAAPINERHPGLADAVCVKLVEDVLNRRLPRRPGGTQGEQVTIFQYWSHFESLGALVLDTYVMELAEEVLLAQNLNSDDQDVVLRALKRVPEGRLKKEGLKALSLLLVEGNSKVVSAVSAQLRSLAENPRFRQRALVCYLDQLEDEEVQTRVAGCAALGCLKAKESIEQLVYLCQTDKEPVREAAKQSLMLCDGTERTI
SIO_010081: RIPOR1
subclass of: SO_0000673
so part of: RIPOR1
location: join(715266..715344,723304..723430,725713..725862,726235..726313,726560..726583,726832..726885,727056..727208,727292..727355,727430..727473,727665..727790,728115..728263,728492..728621,729436..730257,730410..730549,730906..731080,731242..731377,731457..731618,731707..731865,732234..732430,732513..732596,733009..733099,733343..733365)
location: region:715266-733365:1
so has part: feature:715266-715344:1:exon
so has part: feature:723304-723430:1:exon
so has part: feature:725713-725862:1:exon
so has part: feature:726235-726313:1:exon
so has part: feature:726560-726583:1:exon
so has part: feature:726832-726885:1:exon
so has part: feature:727056-727208:1:exon
so has part: feature:727292-727355:1:exon
so has part: feature:727430-727473:1:exon
so has part: feature:727665-727790:1:exon
so has part: feature:728115-728263:1:exon
so has part: feature:728492-728621:1:exon
so has part: feature:729436-730257:1:exon
so has part: feature:730410-730549:1:exon
so has part: feature:730906-731080:1:exon
so has part: feature:731242-731377:1:exon
so has part: feature:731457-731618:1:exon
so has part: feature:731707-731865:1:exon
so has part: feature:732234-732430:1:exon
so has part: feature:732513-732596:1:exon
so has part: feature:733009-733099:1:exon
so has part: feature:733343-733365:1:exon

XP_035192474.1
type: Protein
SIO_000068: ncbiprotein

position:733365:1
position: 733365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715266-715344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723304-723430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725713-725862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726235-726313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726560-726583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726832-726885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727056-727208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727292-727355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727430-727473:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727665-727790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728115-728263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728492-728621:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729436-730257:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730410-730549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:730906-731080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:731242-731377:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:731457-731618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:731707-731865:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:732234-732430:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:732513-732596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:733009-733099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:733343-733365:1:exon

RIPOR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: RIPOR1
product: RHO family interacting cell polarization regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_035336582.1
SIO_010081: RIPOR1
subclass of: SO_0000673
so part of: RIPOR1
location: join(718783..719034,723304..723430,725713..725862,726235..726313,726560..726583,726832..726885,727056..727208,727292..727355,727430..727473,727665..727790,728115..728263,728492..728621,729436..730257,730410..730549,730906..731080,731242..731377,731457..731618,731707..731865,732234..732430,732513..732596,733009..733099,734159..735128)
location: region:718783-735128:1
so has part: feature:718783-719034:1:exon
so has part: feature:723304-723430:1:exon
so has part: feature:725713-725862:1:exon
so has part: feature:726235-726313:1:exon
so has part: feature:726560-726583:1:exon
so has part: feature:726832-726885:1:exon
so has part: feature:727056-727208:1:exon
so has part: feature:727292-727355:1:exon
so has part: feature:727430-727473:1:exon
so has part: feature:727665-727790:1:exon
so has part: feature:728115-728263:1:exon
so has part: feature:728492-728621:1:exon
so has part: feature:729436-730257:1:exon
so has part: feature:730410-730549:1:exon
so has part: feature:730906-731080:1:exon
so has part: feature:731242-731377:1:exon
so has part: feature:731457-731618:1:exon
so has part: feature:731707-731865:1:exon
so has part: feature:732234-732430:1:exon
so has part: feature:732513-732596:1:exon
so has part: feature:733009-733099:1:exon
so has part: feature:734159-735128:1:exon

position:718783:1
position: 718783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718783-719034:1:exon

position:719034:1
position: 719034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723304-723430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725713-725862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726235-726313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726560-726583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726832-726885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727056-727208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727292-727355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727430-727473:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727665-727790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728115-728263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728492-728621:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729436-730257:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730410-730549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:730906-731080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:731242-731377:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:731457-731618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:731707-731865:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:732234-732430:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:732513-732596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:733009-733099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:734159-735128:1:exon

RIPOR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RIPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho family-interacting cell polarization regulator 1 isoform X2
translation: MNGKQKGRPSRSHSTMSLSARPQRRVLVAKINRSQSFAGVNSTADRPFRNLSPFTPTVSRKTGSRVSRMFSMSHKSPPPKVPQPNRLDEVYEALKKGLTAYLEVHQLELEKLSTQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKIDELYEAYCIQRRLRDGAHNMVKAYSTGSPGSREARESLAEASKGYKEYTENMCLLESELESQLGEFHVRMKGLAGFARLCAGDQYEIFMKYGRQRWKLRGRIEVNSKQVWDSEEMVFLPLITEFLSIKVTELKSLANHVVVGNVSCETKDLFAALPQVVAVDINDLGTLKLSLEVTWNPFDKDDQPSAASSVNKASTVNKRFSTYNQSPPDTPSLREQAFYNMLRRQEELENGTAWSISSESSDDSSSPQLSGSARHAAKPIVQPEVQASAPAIEISFSQQQEEAGAGGGVPAGPALPEHPEEQGGRKKDPVANGHVPYARTLSHISEASVDASMETKAVESLWEPSPSPEDPGAGEPDADSIPGASNSVPEAWAGQDSGPEAKPRAMVAWAETCETEAKPAASPAPSPAPAQEVCGSEAPAQAAVQAQAPAEEEPVLTPHLAASPPAVPRVKAVDSGLEEAISLLASALDDYRGQFPELQPLERELKHLEEILLHKQGVFLSRASSISLTVEHALESFSFLNTSDMEDSEGSEEDALQDERRASRARRGSRAPSAGEVGADDAGTCSGSDGSADPMSTGNEFLDKALVLHLHNCNRLLLKLGTFGPLRCHEMYALDRLLREAQVLEIVCQLTEERLEAATSAAGVVQFSTRKEGVLPLWDRCVELPNVYTCPVERFLQVLGAQYAAPINERHPGLADAVCVKLVEDVLNRRLPRRPGGTQGEQVTIFQYWSHFESLGALVLDTYVMELAEEVLLAQNLNSDDQDVVLRALKRVPEGRLKKEGLKALSLLLVEGNSKVVSAVSAQLRSLAENPRFRQRALVCYLDQLEDEEVQTRVAGCAALGCLKAKESIEQLVYLCQTDKEPVREAAKQSLMLCGEDGKSAHRRLEETLDSLPRIFAPASMASTAF
SIO_010081: RIPOR1
subclass of: SO_0000673
so part of: RIPOR1
location: join(719016..719034,723304..723430,725713..725862,726235..726313,726560..726583,726832..726885,727056..727208,727292..727355,727430..727473,727665..727790,728115..728263,728492..728621,729436..730257,730410..730549,730906..731080,731242..731377,731457..731618,731707..731865,732234..732430,732513..732596,733009..733099,734159..734256)
location: region:719016-734256:1
so has part: feature:719016-719034:1:exon
so has part: feature:723304-723430:1:exon
so has part: feature:725713-725862:1:exon
so has part: feature:726235-726313:1:exon
so has part: feature:726560-726583:1:exon
so has part: feature:726832-726885:1:exon
so has part: feature:727056-727208:1:exon
so has part: feature:727292-727355:1:exon
so has part: feature:727430-727473:1:exon
so has part: feature:727665-727790:1:exon
so has part: feature:728115-728263:1:exon
so has part: feature:728492-728621:1:exon
so has part: feature:729436-730257:1:exon
so has part: feature:730410-730549:1:exon
so has part: feature:730906-731080:1:exon
so has part: feature:731242-731377:1:exon
so has part: feature:731457-731618:1:exon
so has part: feature:731707-731865:1:exon
so has part: feature:732234-732430:1:exon
so has part: feature:732513-732596:1:exon
so has part: feature:733009-733099:1:exon
so has part: feature:734159-734256:1:exon

XP_035192473.1
type: Protein
SIO_000068: ncbiprotein

position:719016:1
position: 719016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719016-719034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723304-723430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725713-725862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726235-726313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726560-726583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726832-726885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727056-727208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727292-727355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727430-727473:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727665-727790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728115-728263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:728492-728621:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729436-730257:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730410-730549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:730906-731080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:731242-731377:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:731457-731618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:731707-731865:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:732234-732430:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:732513-732596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:733009-733099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:734159-734256:1:exon

RIPOR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: RIPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho family-interacting cell polarization regulator 1 isoform X4
translation: MSLSARPQRRVLVAKINRSQSFAGVNSTADRPFRNLSPFTPTVSRKTGSRVSRMFSMSHKSPPPKVPQPNRLDEVYEALKKGLTAYLEVHQLELEKLSTQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKIDELYEAYCIQRRLRDGAHNMVKAYSTGSPGSREARESLAEASKGYKEYTENMCLLESELESQLGEFHVRMKGLAGFARLCAGDQYEIFMKYGRQRWKLRGRIEVNSKQVWDSEEMVFLPLITEFLSIKVTELKSLANHVVVGNVSCETKDLFAALPQVVAVDINDLGTLKLSLEVTWNPFDKDDQPSAASSVNKASTVNKRFSTYNQSPPDTPSLREQAFYNMLRRQEELENGTAWSISSESSDDSSSPQLSGSARHAAKPIVQPEVQASAPAIEISFSQQQEEAGAGGGVPAGPALPEHPEEQGGRKKDPVANGHVPYARTLSHISEASVDASMETKAVESLWEPSPSPEDPGAGEPDADSIPGASNSVPEAWAGQDSGPEAKPRAMVAWAETCETEAKPAASPAPSPAPAQEVCGSEAPAQAAVQAQAPAEEEPVLTPHLAASPPAVPRVKAVDSGLEEAISLLASALDDYRGQFPELQPLERELKHLEEILLHKQGVFLSRASSISLTVEHALESFSFLNTSDMEDSEGSEEDALQDERRASRARRGSRAPSAGEVGADDAGTCSGSDGSADPMSTGNEFLDKALVLHLHNCNRLLLKLGTFGPLRCHEMYALDRLLREAQVLEIVCQLTEERLEAATSAAGVVQFSTRKEGVLPLWDRCVELPNVYTCPVERFLQVLGAQYAAPINERHPGLADAVCVKLVEDVLNRRLPRRPGGTQGEQVTIFQYWSHFESLGALVLDTYVMELAEEVLLAQNLNSDDQDVVLRALKRVPEGRLKKEGLKALSLLLVEGNSKVVSAVSAQLRSLAENPRFRQRALVCYLDQLEDEEVQTRVAGCAALGCLKAKESIEQLVYLCQTDKEPVREAAKQSLMLCGEDGKSAHRRLEETLDSLPRIFAPASMASTAF
SIO_010081: RIPOR1
subclass of: SO_0000673
so part of: RIPOR1
location: join(723330..723430,725713..725862,726235..726313,726560..726583,726832..726885,727056..727208,727292..727355,727430..727473,727665..727790,728115..728263,728492..728621,729436..730257,730410..730549,730906..731080,731242..731377,731457..731618,731707..731865,732234..732430,732513..732596,733009..733099,734159..734256)
location: region:723330-734256:1
so has part: feature:723330-723430:1:exon
so has part: feature:725713-725862:1:exon
so has part: feature:726235-726313:1:exon
so has part: feature:726560-726583:1:exon
so has part: feature:726832-726885:1:exon
so has part: feature:727056-727208:1:exon
so has part: feature:727292-727355:1:exon
so has part: feature:727430-727473:1:exon
so has part: feature:727665-727790:1:exon
so has part: feature:728115-728263:1:exon
so has part: feature:728492-728621:1:exon
so has part: feature:729436-730257:1:exon
so has part: feature:730410-730549:1:exon
so has part: feature:730906-731080:1:exon
so has part: feature:731242-731377:1:exon
so has part: feature:731457-731618:1:exon
so has part: feature:731707-731865:1:exon
so has part: feature:732234-732430:1:exon
so has part: feature:732513-732596:1:exon
so has part: feature:733009-733099:1:exon
so has part: feature:734159-734256:1:exon

XP_035192475.1
type: Protein
SIO_000068: ncbiprotein

position:723330:1
position: 723330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723330-723430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725713-725862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:726235-726313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726560-726583:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726832-726885:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727056-727208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727292-727355:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:727430-727473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727665-727790:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:728115-728263:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728492-728621:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:729436-730257:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:730410-730549:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730906-731080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731242-731377:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:731457-731618:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:731707-731865:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:732234-732430:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:732513-732596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:733009-733099:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:734159-734256:1:exon

CTCF
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CTCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 744594..774017
location: region:744594-774017:1
so has part: feature:744594-774017:1:exon
subclass of: SO_0000010

118172577
type: Gene
SIO_000068: ncbigene

position:744594:1
position: 744594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774017:1
position: 774017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744594-774017:1:exon

CTCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CTCF
product: CCCTC-binding factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_035336586.1
SIO_010081: CTCF
subclass of: SO_0000673
so part of: CTCF
location: join(744594..744782,761956..762748,763420..763590,764266..764399,765862..765982,766781..766930,768506..768666,769092..769274,770011..770146,771219..771386,772455..774017)
location: region:744594-774017:1
so has part: feature:744594-744782:1:exon
so has part: feature:761956-762748:1:exon
so has part: feature:763420-763590:1:exon
so has part: feature:764266-764399:1:exon
so has part: feature:765862-765982:1:exon
so has part: feature:766781-766930:1:exon
so has part: feature:768506-768666:1:exon
so has part: feature:769092-769274:1:exon
so has part: feature:770011-770146:1:exon
so has part: feature:771219-771386:1:exon
so has part: feature:772455-774017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:744594-744782:1:exon

position:744782:1
position: 744782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761956-762748:1:exon

position:761956:1
position: 761956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762748:1
position: 762748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:763420-763590:1:exon

position:763420:1
position: 763420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763590:1
position: 763590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:764266-764399:1:exon

position:764266:1
position: 764266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764399:1
position: 764399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:765862-765982:1:exon

position:765862:1
position: 765862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765982:1
position: 765982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:766781-766930:1:exon

position:766781:1
position: 766781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766930:1
position: 766930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:768506-768666:1:exon

position:768506:1
position: 768506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768666:1
position: 768666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:769092-769274:1:exon

position:769092:1
position: 769092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769274:1
position: 769274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:770011-770146:1:exon

position:770011:1
position: 770011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770146:1
position: 770146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:771219-771386:1:exon

position:771219:1
position: 771219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771386:1
position: 771386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:772455-774017:1:exon

position:772455:1
position: 772455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CTCF
product: CCCTC-binding factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_035336589.1
SIO_010081: CTCF
subclass of: SO_0000673
so part of: CTCF
location: join(744619..744782,746551..746703,761956..762748,763420..763590,764266..764399,765862..765982,766781..766930,768506..768666,769092..769274,770011..770146,771219..771386,772455..774017)
location: region:744619-774017:1
so has part: feature:744619-744782:1:exon
so has part: feature:746551-746703:1:exon
so has part: feature:761956-762748:1:exon
so has part: feature:763420-763590:1:exon
so has part: feature:764266-764399:1:exon
so has part: feature:765862-765982:1:exon
so has part: feature:766781-766930:1:exon
so has part: feature:768506-768666:1:exon
so has part: feature:769092-769274:1:exon
so has part: feature:770011-770146:1:exon
so has part: feature:771219-771386:1:exon
so has part: feature:772455-774017:1:exon

position:744619:1
position: 744619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744619-744782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:746551-746703:1:exon

position:746551:1
position: 746551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746703:1
position: 746703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761956-762748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763420-763590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:764266-764399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765862-765982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766781-766930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768506-768666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:769092-769274:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:770011-770146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:771219-771386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:772455-774017:1:exon

CTCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CTCF
product: CCCTC-binding factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_035336588.1
SIO_010081: CTCF
subclass of: SO_0000673
so part of: CTCF
location: join(744619..744782,746580..746703,761956..762748,763420..763590,764266..764399,765862..765982,766781..766930,768506..768666,769092..769274,770011..770146,771219..771386,772455..774017)
location: region:744619-774017:1
so has part: feature:744619-744782:1:exon
so has part: feature:746580-746703:1:exon
so has part: feature:761956-762748:1:exon
so has part: feature:763420-763590:1:exon
so has part: feature:764266-764399:1:exon
so has part: feature:765862-765982:1:exon
so has part: feature:766781-766930:1:exon
so has part: feature:768506-768666:1:exon
so has part: feature:769092-769274:1:exon
so has part: feature:770011-770146:1:exon
so has part: feature:771219-771386:1:exon
so has part: feature:772455-774017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:744619-744782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:746580-746703:1:exon

position:746580:1
position: 746580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761956-762748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763420-763590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:764266-764399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765862-765982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766781-766930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768506-768666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:769092-769274:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:770011-770146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:771219-771386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:772455-774017:1:exon

CTCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CTCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor CTCF isoform X1
translation: MSLKHQQQEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDACHIPPNQADGGEVVQDVNSGVQMVMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEQEAPAPPPSKKRRGRPPGKAATQTKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPEMILSMMDR
SIO_010081: CTCF
subclass of: SO_0000673
so part of: CTCF
location: join(744762..744782,761956..762748,763420..763590,764266..764399,765862..765982,766781..766930,768506..768666,769092..769274,770011..770146,771219..771386,772455..772636)
location: region:744762-772636:1
so has part: feature:744762-744782:1:exon
so has part: feature:761956-762748:1:exon
so has part: feature:763420-763590:1:exon
so has part: feature:764266-764399:1:exon
so has part: feature:765862-765982:1:exon
so has part: feature:766781-766930:1:exon
so has part: feature:768506-768666:1:exon
so has part: feature:769092-769274:1:exon
so has part: feature:770011-770146:1:exon
so has part: feature:771219-771386:1:exon
so has part: feature:772455-772636:1:exon

XP_035192477.1
type: Protein
SIO_000068: ncbiprotein

position:744762:1
position: 744762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772636:1
position: 772636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744762-744782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761956-762748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763420-763590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764266-764399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765862-765982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766781-766930:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768506-768666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:769092-769274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:770011-770146:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:771219-771386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:772455-772636:1:exon

LOC118172594
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 758666..760592
location: region:758666-760592:1
so has part: feature:758666-760592:1:exon
subclass of: SO_0000011

118172594
type: Gene
SIO_000068: ncbigene

position:758666:1
position: 758666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760592:1
position: 760592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758666-760592:1:exon

LOC118172594
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118172594
product: uncharacterized LOC118172594
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004753764.1
SIO_010081: LOC118172594
subclass of: SO_0000673
so part of: LOC118172594
location: join(758666..759647,759891..760592)
location: region:758666-760592:1
so has part: feature:758666-759647:1:exon
so has part: feature:759891-760592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758666-759647:1:exon

position:759647:1
position: 759647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759891-760592:1:exon

position:759891:1
position: 759891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CTCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor CTCF isoform X2
translation: MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDACHIPPNQADGGEVVQDVNSGVQMVMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEQEAPAPPPSKKRRGRPPGKAATQTKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPEMILSMMDR
SIO_010081: CTCF
subclass of: SO_0000673
so part of: CTCF
location: join(761968..762748,763420..763590,764266..764399,765862..765982,766781..766930,768506..768666,769092..769274,770011..770146,771219..771386,772455..772636)
location: region:761968-772636:1
so has part: feature:761968-762748:1:exon
so has part: feature:763420-763590:1:exon
so has part: feature:764266-764399:1:exon
so has part: feature:765862-765982:1:exon
so has part: feature:766781-766930:1:exon
so has part: feature:768506-768666:1:exon
so has part: feature:769092-769274:1:exon
so has part: feature:770011-770146:1:exon
so has part: feature:771219-771386:1:exon
so has part: feature:772455-772636:1:exon

XP_035192479.1
type: Protein
SIO_000068: ncbiprotein

position:761968:1
position: 761968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761968-762748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763420-763590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764266-764399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765862-765982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:766781-766930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768506-768666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:769092-769274:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:770011-770146:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:771219-771386:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:772455-772636:1:exon

CTCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CTCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional repressor CTCF isoform X2
translation: MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDACHIPPNQADGGEVVQDVNSGVQMVMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEQEAPAPPPSKKRRGRPPGKAATQTKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPEMILSMMDR
SIO_010081: CTCF
subclass of: SO_0000673
so part of: CTCF
location: join(761968..762748,763420..763590,764266..764399,765862..765982,766781..766930,768506..768666,769092..769274,770011..770146,771219..771386,772455..772636)
location: region:761968-772636:1
so has part: feature:761968-762748:1:exon
so has part: feature:763420-763590:1:exon
so has part: feature:764266-764399:1:exon
so has part: feature:765862-765982:1:exon
so has part: feature:766781-766930:1:exon
so has part: feature:768506-768666:1:exon
so has part: feature:769092-769274:1:exon
so has part: feature:770011-770146:1:exon
so has part: feature:771219-771386:1:exon
so has part: feature:772455-772636:1:exon

XP_035192480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:761968-762748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763420-763590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764266-764399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765862-765982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:766781-766930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768506-768666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:769092-769274:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:770011-770146:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:771219-771386:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:772455-772636:1:exon

LOC118172595
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(767475..791375)
location: region:767475-791375:-1
so has part: feature:767475-791375:-1:exon
subclass of: SO_0000011

118172595
type: Gene
SIO_000068: ncbigene

position:767475:-1
position: 767475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791375:-1
position: 791375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767475-791375:-1:exon

LOC118172595
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8884
nc RNA class: lncRNA
gene: LOC118172595
product: uncharacterized LOC118172595
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004753765.1
SIO_010081: LOC118172595
subclass of: SO_0000673
so part of: LOC118172595
location: complement(join(767475..767487,780812..780814,791201..791375))
location: region:767475-791375:-1
so has part: feature:791201-791375:-1:exon
so has part: feature:780812-780814:-1:exon
so has part: feature:767475-767487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791201-791375:-1:exon

position:791201:-1
position: 791201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:780812-780814:-1:exon

position:780812:-1
position: 780812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780814:-1
position: 780814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:767475-767487:-1:exon

position:767487:-1
position: 767487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CARMIL2
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: CARMIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 777203..795983
location: region:777203-795983:1
so has part: feature:777203-795983:1:exon
subclass of: SO_0000010

118172574
type: Gene
SIO_000068: ncbigene

position:777203:1
position: 777203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795983:1
position: 795983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777203-795983:1:exon

CARMIL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CARMIL2
product: capping protein regulator and myosin 1 linker 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035336576.1
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777203..777222,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,794588..794624,794757..794825,794963..795229,795329..795430,795593..795685,795766..795983)
location: region:777203-795983:1
so has part: feature:777203-777222:1:exon
so has part: feature:778909-779000:1:exon
so has part: feature:779234-779284:1:exon
so has part: feature:779406-779465:1:exon
so has part: feature:780396-780517:1:exon
so has part: feature:780758-780855:1:exon
so has part: feature:781405-781475:1:exon
so has part: feature:781677-781750:1:exon
so has part: feature:782236-782311:1:exon
so has part: feature:782383-782471:1:exon
so has part: feature:782868-782962:1:exon
so has part: feature:783117-783203:1:exon
so has part: feature:783327-783436:1:exon
so has part: feature:783566-783643:1:exon
so has part: feature:783750-783826:1:exon
so has part: feature:783907-784011:1:exon
so has part: feature:784163-784232:1:exon
so has part: feature:784339-784420:1:exon
so has part: feature:785495-785591:1:exon
so has part: feature:785687-785744:1:exon
so has part: feature:785919-786091:1:exon
so has part: feature:786561-786629:1:exon
so has part: feature:787244-787337:1:exon
so has part: feature:787418-787513:1:exon
so has part: feature:787675-787803:1:exon
so has part: feature:788341-788454:1:exon
so has part: feature:788669-788844:1:exon
so has part: feature:789134-789221:1:exon
so has part: feature:789606-789725:1:exon
so has part: feature:790249-790315:1:exon
so has part: feature:791265-791470:1:exon
so has part: feature:793210-793313:1:exon
so has part: feature:793667-794060:1:exon
so has part: feature:794243-794362:1:exon
so has part: feature:794588-794624:1:exon
so has part: feature:794757-794825:1:exon
so has part: feature:794963-795229:1:exon
so has part: feature:795329-795430:1:exon
so has part: feature:795593-795685:1:exon
so has part: feature:795766-795983:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777203-777222:1:exon

position:777222:1
position: 777222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778909-779000:1:exon

position:778909:1
position: 778909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779000:1
position: 779000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:779234-779284:1:exon

position:779234:1
position: 779234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779284:1
position: 779284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:779406-779465:1:exon

position:779406:1
position: 779406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779465:1
position: 779465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:780396-780517:1:exon

position:780396:1
position: 780396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780517:1
position: 780517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:780758-780855:1:exon

position:780758:1
position: 780758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780855:1
position: 780855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:781405-781475:1:exon

position:781405:1
position: 781405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781475:1
position: 781475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:781677-781750:1:exon

position:781677:1
position: 781677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781750:1
position: 781750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:782236-782311:1:exon

position:782236:1
position: 782236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782311:1
position: 782311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:782383-782471:1:exon

position:782383:1
position: 782383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782471:1
position: 782471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:782868-782962:1:exon

position:782868:1
position: 782868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782962:1
position: 782962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:783117-783203:1:exon

position:783117:1
position: 783117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783203:1
position: 783203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:783327-783436:1:exon

position:783327:1
position: 783327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783436:1
position: 783436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:783566-783643:1:exon

position:783566:1
position: 783566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783643:1
position: 783643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:783750-783826:1:exon

position:783750:1
position: 783750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783826:1
position: 783826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:783907-784011:1:exon

position:783907:1
position: 783907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784011:1
position: 784011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:784163-784232:1:exon

position:784163:1
position: 784163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784232:1
position: 784232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:784339-784420:1:exon

position:784339:1
position: 784339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784420:1
position: 784420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:785495-785591:1:exon

position:785495:1
position: 785495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785591:1
position: 785591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:785687-785744:1:exon

position:785687:1
position: 785687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785744:1
position: 785744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:785919-786091:1:exon

position:785919:1
position: 785919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786091:1
position: 786091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:786561-786629:1:exon

position:786561:1
position: 786561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786629:1
position: 786629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:787244-787337:1:exon

position:787244:1
position: 787244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787337:1
position: 787337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:787418-787513:1:exon

position:787418:1
position: 787418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787513:1
position: 787513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:787675-787803:1:exon

position:787675:1
position: 787675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787803:1
position: 787803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:788341-788454:1:exon

position:788341:1
position: 788341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788454:1
position: 788454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:788669-788844:1:exon

position:788669:1
position: 788669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788844:1
position: 788844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:789134-789221:1:exon

position:789134:1
position: 789134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789221:1
position: 789221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:789606-789725:1:exon

position:789606:1
position: 789606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789725:1
position: 789725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:790249-790315:1:exon

position:790249:1
position: 790249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790315:1
position: 790315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:791265-791470:1:exon

position:791265:1
position: 791265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791470:1
position: 791470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:793210-793313:1:exon

position:793210:1
position: 793210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793313:1
position: 793313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:793667-794060:1:exon

position:793667:1
position: 793667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794060:1
position: 794060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:794243-794362:1:exon

position:794243:1
position: 794243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794362:1
position: 794362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:794588-794624:1:exon

position:794588:1
position: 794588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794624:1
position: 794624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:794757-794825:1:exon

position:794757:1
position: 794757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794825:1
position: 794825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:794963-795229:1:exon

position:794963:1
position: 794963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795229:1
position: 795229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:795329-795430:1:exon

position:795329:1
position: 795329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795430:1
position: 795430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:795593-795685:1:exon

position:795593:1
position: 795593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795685:1
position: 795685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:795766-795983:1:exon

position:795766:1
position: 795766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARMIL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CARMIL2
product: capping protein regulator and myosin 1 linker 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035336575.1
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777256..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,794588..794624,794757..794825,794963..795229,795329..795430,795593..795685,795766..795983)
location: region:777256-795983:1
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position:777256:1
position: 777256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777256-777893:1:exon

position:777893:1
position: 777893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
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CARMIL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CARMIL2
product: capping protein regulator and myosin 1 linker 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035336579.1
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777256..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,794588..794624,794757..794825,795593..795685,795766..795983)
location: region:777256-795983:1
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urn:…
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urn:…
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urn:…
SIO_000300: 35
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urn:…
SIO_000300: 36
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urn:…
SIO_000300: 37
SIO_000628: feature:795593-795685:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:795766-795983:1:exon

CARMIL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CARMIL2
product: capping protein regulator and myosin 1 linker 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035336578.1
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777256..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,795055..795229,795329..795430,795593..795685,795766..795983)
location: region:777256-795983:1
so has part: feature:777256-777893:1:exon
so has part: feature:778909-779000:1:exon
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urn:…
SIO_000300: 1
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urn:…
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position:795055:1
position: 795055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:795329-795430:1:exon

urn:…
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urn:…
SIO_000300: 38
SIO_000628: feature:795766-795983:1:exon

CARMIL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: CARMIL2
product: capping protein regulator and myosin 1 linker 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_035336580.1
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777256..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794121,794162..794271)
location: region:777256-794271:1
so has part: feature:777256-777893:1:exon
so has part: feature:778909-779000:1:exon
so has part: feature:779234-779284:1:exon
so has part: feature:779406-779465:1:exon
so has part: feature:780396-780517:1:exon
so has part: feature:780758-780855:1:exon
so has part: feature:781405-781475:1:exon
so has part: feature:781677-781750:1:exon
so has part: feature:782236-782311:1:exon
so has part: feature:782383-782471:1:exon
so has part: feature:782868-782962:1:exon
so has part: feature:783117-783203:1:exon
so has part: feature:783327-783436:1:exon
so has part: feature:783566-783643:1:exon
so has part: feature:783750-783826:1:exon
so has part: feature:783907-784011:1:exon
so has part: feature:784163-784232:1:exon
so has part: feature:784339-784420:1:exon
so has part: feature:785495-785591:1:exon
so has part: feature:785687-785744:1:exon
so has part: feature:785919-786091:1:exon
so has part: feature:786561-786629:1:exon
so has part: feature:787244-787337:1:exon
so has part: feature:787418-787513:1:exon
so has part: feature:787675-787803:1:exon
so has part: feature:788341-788454:1:exon
so has part: feature:788669-788844:1:exon
so has part: feature:789134-789221:1:exon
so has part: feature:789606-789725:1:exon
so has part: feature:790249-790315:1:exon
so has part: feature:791265-791470:1:exon
so has part: feature:793210-793313:1:exon
so has part: feature:793667-794121:1:exon
so has part: feature:794162-794271:1:exon

position:794271:1
position: 794271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777256-777893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778909-779000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779234-779284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779406-779465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780396-780517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780758-780855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781405-781475:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781677-781750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782236-782311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:782383-782471:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782868-782962:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:783117-783203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:783327-783436:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:783566-783643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:783750-783826:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:783907-784011:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:784163-784232:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:784339-784420:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:785495-785591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785687-785744:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785919-786091:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:786561-786629:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:787244-787337:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:787418-787513:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:787675-787803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:788341-788454:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:788669-788844:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:789134-789221:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:789606-789725:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:790249-790315:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:791265-791470:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:793210-793313:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:793667-794121:1:exon

position:794121:1
position: 794121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:794162-794271:1:exon

position:794162:1
position: 794162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARMIL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CARMIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
translation: MAASPGGIPAELQEGIAASLGTKKILLVKSVQLQVKSKYDDFILVLTPWRAYVVPAMLPVRVHSSFSFLEVRDIAVREPSVVVIETDTSSYSFRLMSFDDVEQVVIHVTMSLKKVFPDSSPGTLLKNSPPNLYERIRRVTDSLEEMLQSNQGPCGGFSETYAALCDYNGFAFREEVQWDVDNIYHGQDCREFNLLDFSHLESRDVALSVAALSFNLWFTKLSCKDFRLNQEIAEQLLYMLSKSVTLEELALENSGLRCDFAQRMAQALSRHPDSVLHTINLAGNQLEDRGVIAFSRYFEKRPKGLQGLSLARTMLAAKGMSALCQALAANEAIGSSLRHLDLSGNPGSLAVEDTTSLQSLLGRCASLAHLSLAATDCSLDTLFGALVQGCCASLVHLDLSKNTYSHRKVKAVPPDIKHFFSQARALRHVSVAGTKLPPDAVRAMLQGLAYNSHISDLHLDLSGCELRSAGAQVIQDLIPDASAISDLDLSDNGFDSDMVTLVLSIGRSKSIRHVSLGKNFNIKSKDGLLDVLHRIVQLTQEDDCPLQSLSVAESRLKLGTNVLLSALGSNTSLTALDISGNAMGDTGAKMLAKALQINTKLRTVVWDRNNTTAFGLLEVAQALERNYTLKSMPLPMSDVVQAYRSNPERTEEAVHKLQSCLARNQMRRALPAQTFRLQQGILASSSEQMVNEICLSVQKHVDILSSCPGREVEADILCAEEAIRNANLAVSILPLLYEAGNTPHQSGKLQHKLECLTEEASQTCGREIQAIMQAAMDTAHNLCPPVMQKSGVRDQLVNAMSERIHLQEHLNLSSVLDQMVTDVFSKLNEIKLSVTAAVADCIVDAVLGDLSAAQCKLAESLPTHGPDLLEPAEDDAAALARSRNLSDLAEKGFAVEEYKMALRRKNKHFRSIRPTPTVRSPSELELPASGKARPAATKDAEPAAGALPGTPPAEALMDLPTAGERLEHCTKARPRPNRRHKQPPSKPNVQPVVHENSEDRSITRVDEGLEDFFTKRLISEELPPMVLESGPGSAPLVSSSSRTLKKKIGNFFAFKKPKSSRGSRCEKEPEGSTAAPRSRRSMLSDILRAPSKAGEPGKALSKSEEGALSTEPEHSQTPEAARRIRPKYSREGKSQSLILLPGEDEEALGVRQDKRRHLEKSDGELPNSFEQRVHVMLHRMGVTKGLAAEGKKQQCKDSEIKKAGSDGDIVDSSADSPPSLKARTHSVSTDVALRSAVEPSPAWKALGRQLNAELTGPSWEQPRRCSAGPEQSGQPACREAWSSSLPRPGRSAPPRRISHGGEPAAGTPLPISPRSGTEDNRLTPRLAAPSGRRAVSVHEEQLREPQCLAELGTVTIPLRLRRSPVLKRRPEVASEPSPTSEAGGTTPQDRPRGGLEEPQPGATGYGERPGGLTQTVANAQDSAVDQRSPVPGRGEPALGQ
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777854..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,794588..794624,794757..794825,794963..795229,795329..795430,795593..795685,795766..795938)
location: region:777854-795938:1
so has part: feature:777854-777893:1:exon
so has part: feature:778909-779000:1:exon
so has part: feature:779234-779284:1:exon
so has part: feature:779406-779465:1:exon
so has part: feature:780396-780517:1:exon
so has part: feature:780758-780855:1:exon
so has part: feature:781405-781475:1:exon
so has part: feature:781677-781750:1:exon
so has part: feature:782236-782311:1:exon
so has part: feature:782383-782471:1:exon
so has part: feature:782868-782962:1:exon
so has part: feature:783117-783203:1:exon
so has part: feature:783327-783436:1:exon
so has part: feature:783566-783643:1:exon
so has part: feature:783750-783826:1:exon
so has part: feature:783907-784011:1:exon
so has part: feature:784163-784232:1:exon
so has part: feature:784339-784420:1:exon
so has part: feature:785495-785591:1:exon
so has part: feature:785687-785744:1:exon
so has part: feature:785919-786091:1:exon
so has part: feature:786561-786629:1:exon
so has part: feature:787244-787337:1:exon
so has part: feature:787418-787513:1:exon
so has part: feature:787675-787803:1:exon
so has part: feature:788341-788454:1:exon
so has part: feature:788669-788844:1:exon
so has part: feature:789134-789221:1:exon
so has part: feature:789606-789725:1:exon
so has part: feature:790249-790315:1:exon
so has part: feature:791265-791470:1:exon
so has part: feature:793210-793313:1:exon
so has part: feature:793667-794060:1:exon
so has part: feature:794243-794362:1:exon
so has part: feature:794588-794624:1:exon
so has part: feature:794757-794825:1:exon
so has part: feature:794963-795229:1:exon
so has part: feature:795329-795430:1:exon
so has part: feature:795593-795685:1:exon
so has part: feature:795766-795938:1:exon

XP_035192466.1
type: Protein
SIO_000068: ncbiprotein

position:777854:1
position: 777854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795938:1
position: 795938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777854-777893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778909-779000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779234-779284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779406-779465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780396-780517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780758-780855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781405-781475:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781677-781750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782236-782311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:782383-782471:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782868-782962:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:783117-783203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:783327-783436:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:783566-783643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:783750-783826:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:783907-784011:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:784163-784232:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:784339-784420:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:785495-785591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785687-785744:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785919-786091:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:786561-786629:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:787244-787337:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:787418-787513:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:787675-787803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:788341-788454:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:788669-788844:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:789134-789221:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:789606-789725:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:790249-790315:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:791265-791470:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:793210-793313:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:793667-794060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:794243-794362:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:794588-794624:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:794757-794825:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:794963-795229:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:795329-795430:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:795593-795685:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:795766-795938:1:exon

CARMIL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CARMIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: capping protein, Arp2/3 and myosin-I linker protein 2 isoform X4
translation: MAASPGGIPAELQEGIAASLGTKKILLVKSVQLQVKSKYDDFILVLTPWRAYVVPAMLPVRVHSSFSFLEVRDIAVREPSVVVIETDTSSYSFRLMSFDDVEQVVIHVTMSLKKVFPDSSPGTLLKNSPPNLYERIRRVTDSLEEMLQSNQGPCGGFSETYAALCDYNGFAFREEVQWDVDNIYHGQDCREFNLLDFSHLESRDVALSVAALSFNLWFTKLSCKDFRLNQEIAEQLLYMLSKSVTLEELALENSGLRCDFAQRMAQALSRHPDSVLHTINLAGNQLEDRGVIAFSRYFEKRPKGLQGLSLARTMLAAKGMSALCQALAANEAIGSSLRHLDLSGNPGSLAVEDTTSLQSLLGRCASLAHLSLAATDCSLDTLFGALVQGCCASLVHLDLSKNTYSHRKVKAVPPDIKHFFSQARALRHVSVAGTKLPPDAVRAMLQGLAYNSHISDLHLDLSGCELRSAGAQVIQDLIPDASAISDLDLSDNGFDSDMVTLVLSIGRSKSIRHVSLGKNFNIKSKDGLLDVLHRIVQLTQEDDCPLQSLSVAESRLKLGTNVLLSALGSNTSLTALDISGNAMGDTGAKMLAKALQINTKLRTVVWDRNNTTAFGLLEVAQALERNYTLKSMPLPMSDVVQAYRSNPERTEEAVHKLQSCLARNQMRRALPAQTFRLQQGILASSSEQMVNEICLSVQKHVDILSSCPGREVEADILCAEEAIRNANLAVSILPLLYEAGNTPHQSGKLQHKLECLTEEASQTCGREIQAIMQAAMDTAHNLCPPVMQKSGVRDQLVNAMSERIHLQEHLNLSSVLDQMVTDVFSKLNEIKLSVTAAVADCIVDAVLGDLSAAQCKLAESLPTHGPDLLEPAEDDAAALARSRNLSDLAEKGFAVEEYKMALRRKNKHFRSIRPTPTVRSPSELELPASGKARPAATKDAEPAAGALPGTPPAEALMDLPTAGERLEHCTKARPRPNRRHKQPPSKPNVQPVVHENSEDRSITRVDEGLEDFFTKRLISEELPPMVLESGPGSAPLVSSSSRTLKKKIGNFFAFKKPKSSRGSRCEKEPEGSTAAPRSRRSMLSDILRAPSKAGEPGKALSKSEEGALSTEPEHSQTPEAARRIRPKYSREGKSQSLILLPGEDEEALGVRQDKRRHLEKSDGELPNSFEQRVHVMLHRMGVTKGLAAEGKKQQCKDSEIKKAGSDGDIVDSSADSPPSLKARTHSVSTAVTIPLRLRRSPVLKRRPEVASEPSPTSEAGGTTPQDRPRGGLEEPQPGATGYGERPGGLTQTVANAQDSAVDQRSPVPGRGEPALGQ
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777854..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,794588..794624,794757..794825,795593..795685,795766..795938)
location: region:777854-795938:1
so has part: feature:777854-777893:1:exon
so has part: feature:778909-779000:1:exon
so has part: feature:779234-779284:1:exon
so has part: feature:779406-779465:1:exon
so has part: feature:780396-780517:1:exon
so has part: feature:780758-780855:1:exon
so has part: feature:781405-781475:1:exon
so has part: feature:781677-781750:1:exon
so has part: feature:782236-782311:1:exon
so has part: feature:782383-782471:1:exon
so has part: feature:782868-782962:1:exon
so has part: feature:783117-783203:1:exon
so has part: feature:783327-783436:1:exon
so has part: feature:783566-783643:1:exon
so has part: feature:783750-783826:1:exon
so has part: feature:783907-784011:1:exon
so has part: feature:784163-784232:1:exon
so has part: feature:784339-784420:1:exon
so has part: feature:785495-785591:1:exon
so has part: feature:785687-785744:1:exon
so has part: feature:785919-786091:1:exon
so has part: feature:786561-786629:1:exon
so has part: feature:787244-787337:1:exon
so has part: feature:787418-787513:1:exon
so has part: feature:787675-787803:1:exon
so has part: feature:788341-788454:1:exon
so has part: feature:788669-788844:1:exon
so has part: feature:789134-789221:1:exon
so has part: feature:789606-789725:1:exon
so has part: feature:790249-790315:1:exon
so has part: feature:791265-791470:1:exon
so has part: feature:793210-793313:1:exon
so has part: feature:793667-794060:1:exon
so has part: feature:794243-794362:1:exon
so has part: feature:794588-794624:1:exon
so has part: feature:794757-794825:1:exon
so has part: feature:795593-795685:1:exon
so has part: feature:795766-795938:1:exon

XP_035192470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:777854-777893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778909-779000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779234-779284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779406-779465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780396-780517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780758-780855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781405-781475:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781677-781750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782236-782311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:782383-782471:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782868-782962:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:783117-783203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:783327-783436:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:783566-783643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:783750-783826:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:783907-784011:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:784163-784232:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:784339-784420:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:785495-785591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785687-785744:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785919-786091:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:786561-786629:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:787244-787337:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:787418-787513:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:787675-787803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:788341-788454:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:788669-788844:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:789134-789221:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:789606-789725:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:790249-790315:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:791265-791470:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:793210-793313:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:793667-794060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:794243-794362:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:794588-794624:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:794757-794825:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:795593-795685:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:795766-795938:1:exon

CARMIL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CARMIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: capping protein, Arp2/3 and myosin-I linker protein 2 isoform X3
translation: MAASPGGIPAELQEGIAASLGTKKILLVKSVQLQVKSKYDDFILVLTPWRAYVVPAMLPVRVHSSFSFLEVRDIAVREPSVVVIETDTSSYSFRLMSFDDVEQVVIHVTMSLKKVFPDSSPGTLLKNSPPNLYERIRRVTDSLEEMLQSNQGPCGGFSETYAALCDYNGFAFREEVQWDVDNIYHGQDCREFNLLDFSHLESRDVALSVAALSFNLWFTKLSCKDFRLNQEIAEQLLYMLSKSVTLEELALENSGLRCDFAQRMAQALSRHPDSVLHTINLAGNQLEDRGVIAFSRYFEKRPKGLQGLSLARTMLAAKGMSALCQALAANEAIGSSLRHLDLSGNPGSLAVEDTTSLQSLLGRCASLAHLSLAATDCSLDTLFGALVQGCCASLVHLDLSKNTYSHRKVKAVPPDIKHFFSQARALRHVSVAGTKLPPDAVRAMLQGLAYNSHISDLHLDLSGCELRSAGAQVIQDLIPDASAISDLDLSDNGFDSDMVTLVLSIGRSKSIRHVSLGKNFNIKSKDGLLDVLHRIVQLTQEDDCPLQSLSVAESRLKLGTNVLLSALGSNTSLTALDISGNAMGDTGAKMLAKALQINTKLRTVVWDRNNTTAFGLLEVAQALERNYTLKSMPLPMSDVVQAYRSNPERTEEAVHKLQSCLARNQMRRALPAQTFRLQQGILASSSEQMVNEICLSVQKHVDILSSCPGREVEADILCAEEAIRNANLAVSILPLLYEAGNTPHQSGKLQHKLECLTEEASQTCGREIQAIMQAAMDTAHNLCPPVMQKSGVRDQLVNAMSERIHLQEHLNLSSVLDQMVTDVFSKLNEIKLSVTAAVADCIVDAVLGDLSAAQCKLAESLPTHGPDLLEPAEDDAAALARSRNLSDLAEKGFAVEEYKMALRRKNKHFRSIRPTPTVRSPSELELPASGKARPAATKDAEPAAGALPGTPPAEALMDLPTAGERLEHCTKARPRPNRRHKQPPSKPNVQPVVHENSEDRSITRVDEGLEDFFTKRLISEELPPMVLESGPGSAPLVSSSSRTLKKKIGNFFAFKKPKSSRGSRCEKEPEGSTAAPRSRRSMLSDILRAPSKAGEPGKALSKSEEGALSTEPEHSQTPEAARRIRPKYSREGKSQSLILLPGEDEEALGVRQDKRRHLEKSDGELPNSFEQRVHVMLHRMGVTKGLAAEGKKQQQPRRCSAGPEQSGQPACREAWSSSLPRPGRSAPPRRISHGGEPAAGTPLPISPRSGTEDNRLTPRLAAPSGRRAVSVHEEQLREPQCLAELGTVTIPLRLRRSPVLKRRPEVASEPSPTSEAGGTTPQDRPRGGLEEPQPGATGYGERPGGLTQTVANAQDSAVDQRSPVPGRGEPALGQ
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777854..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,795055..795229,795329..795430,795593..795685,795766..795938)
location: region:777854-795938:1
so has part: feature:777854-777893:1:exon
so has part: feature:778909-779000:1:exon
so has part: feature:779234-779284:1:exon
so has part: feature:779406-779465:1:exon
so has part: feature:780396-780517:1:exon
so has part: feature:780758-780855:1:exon
so has part: feature:781405-781475:1:exon
so has part: feature:781677-781750:1:exon
so has part: feature:782236-782311:1:exon
so has part: feature:782383-782471:1:exon
so has part: feature:782868-782962:1:exon
so has part: feature:783117-783203:1:exon
so has part: feature:783327-783436:1:exon
so has part: feature:783566-783643:1:exon
so has part: feature:783750-783826:1:exon
so has part: feature:783907-784011:1:exon
so has part: feature:784163-784232:1:exon
so has part: feature:784339-784420:1:exon
so has part: feature:785495-785591:1:exon
so has part: feature:785687-785744:1:exon
so has part: feature:785919-786091:1:exon
so has part: feature:786561-786629:1:exon
so has part: feature:787244-787337:1:exon
so has part: feature:787418-787513:1:exon
so has part: feature:787675-787803:1:exon
so has part: feature:788341-788454:1:exon
so has part: feature:788669-788844:1:exon
so has part: feature:789134-789221:1:exon
so has part: feature:789606-789725:1:exon
so has part: feature:790249-790315:1:exon
so has part: feature:791265-791470:1:exon
so has part: feature:793210-793313:1:exon
so has part: feature:793667-794060:1:exon
so has part: feature:794243-794362:1:exon
so has part: feature:795055-795229:1:exon
so has part: feature:795329-795430:1:exon
so has part: feature:795593-795685:1:exon
so has part: feature:795766-795938:1:exon

XP_035192469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:777854-777893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778909-779000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779234-779284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779406-779465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780396-780517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780758-780855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781405-781475:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781677-781750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782236-782311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:782383-782471:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782868-782962:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:783117-783203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:783327-783436:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:783566-783643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:783750-783826:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:783907-784011:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:784163-784232:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:784339-784420:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:785495-785591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785687-785744:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785919-786091:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:786561-786629:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:787244-787337:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:787418-787513:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:787675-787803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:788341-788454:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:788669-788844:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:789134-789221:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:789606-789725:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:790249-790315:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:791265-791470:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:793210-793313:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:793667-794060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:794243-794362:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:795055-795229:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:795329-795430:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:795593-795685:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:795766-795938:1:exon

CARMIL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CARMIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: capping protein, Arp2/3 and myosin-I linker protein 2 isoform X5
translation: MAASPGGIPAELQEGIAASLGTKKILLVKSVQLQVKSKYDDFILVLTPWRAYVVPAMLPVRVHSSFSFLEVRDIAVREPSVVVIETDTSSYSFRLMSFDDVEQVVIHVTMSLKKVFPDSSPGTLLKNSPPNLYERIRRVTDSLEEMLQSNQGPCGGFSETYAALCDYNGFAFREEVQWDVDNIYHGQDCREFNLLDFSHLESRDVALSVAALSFNLWFTKLSCKDFRLNQEIAEQLLYMLSKSVTLEELALENSGLRCDFAQRMAQALSRHPDSVLHTINLAGNQLEDRGVIAFSRYFEKRPKGLQGLSLARTMLAAKGMSALCQALAANEAIGSSLRHLDLSGNPGSLAVEDTTSLQSLLGRCASLAHLSLAATDCSLDTLFGALVQGCCASLVHLDLSKNTYSHRKVKAVPPDIKHFFSQARALRHVSVAGTKLPPDAVRAMLQGLAYNSHISDLHLDLSGCELRSAGAQVIQDLIPDASAISDLDLSDNGFDSDMVTLVLSIGRSKSIRHVSLGKNFNIKSKDGLLDVLHRIVQLTQEDDCPLQSLSVAESRLKLGTNVLLSALGSNTSLTALDISGNAMGDTGAKMLAKALQINTKLRTVVWDRNNTTAFGLLEVAQALERNYTLKSMPLPMSDVVQAYRSNPERTEEAVHKLQSCLARNQMRRALPAQTFRLQQGILASSSEQMVNEICLSVQKHVDILSSCPGREVEADILCAEEAIRNANLAVSILPLLYEAGNTPHQSGKLQHKLECLTEEASQTCGREIQAIMQAAMDTAHNLCPPVMQKSGVRDQLVNAMSERIHLQEHLNLSSVLDQMVTDVFSKLNEIKLSVTAAVADCIVDAVLGDLSAAQCKLAESLPTHGPDLLEPAEDDAAALARSRNLSDLAEKGFAVEEYKMALRRKNKHFRSIRPTPTVRSPSELELPASGKARPAATKDAEPAAGALPGTPPAEALMDLPTAGERLEHCTKARPRPNRRHKQPPSKPNVQPVVHENSEDRSITRVDEGLEDFFTKRLISEELPPMVLESGPGSAPLVSSSSRTLKKKIGNFFAFKKPKSSRGSRCEKEPEGSTAAPRSRRSMLSDILRAPSKAGEPGKALSKSEEGALSTEPEHSQTPEAARRIRPKYSREGKSQSLILLPGEDEEALGVRQDKVSIAVTSPRNVTLDDLVSGLEPRGPLSRRPTGMGAVPLTLPRS
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(777854..777893,778909..779000,779234..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794121,794162..794232)
location: region:777854-794232:1
so has part: feature:777854-777893:1:exon
so has part: feature:778909-779000:1:exon
so has part: feature:779234-779284:1:exon
so has part: feature:779406-779465:1:exon
so has part: feature:780396-780517:1:exon
so has part: feature:780758-780855:1:exon
so has part: feature:781405-781475:1:exon
so has part: feature:781677-781750:1:exon
so has part: feature:782236-782311:1:exon
so has part: feature:782383-782471:1:exon
so has part: feature:782868-782962:1:exon
so has part: feature:783117-783203:1:exon
so has part: feature:783327-783436:1:exon
so has part: feature:783566-783643:1:exon
so has part: feature:783750-783826:1:exon
so has part: feature:783907-784011:1:exon
so has part: feature:784163-784232:1:exon
so has part: feature:784339-784420:1:exon
so has part: feature:785495-785591:1:exon
so has part: feature:785687-785744:1:exon
so has part: feature:785919-786091:1:exon
so has part: feature:786561-786629:1:exon
so has part: feature:787244-787337:1:exon
so has part: feature:787418-787513:1:exon
so has part: feature:787675-787803:1:exon
so has part: feature:788341-788454:1:exon
so has part: feature:788669-788844:1:exon
so has part: feature:789134-789221:1:exon
so has part: feature:789606-789725:1:exon
so has part: feature:790249-790315:1:exon
so has part: feature:791265-791470:1:exon
so has part: feature:793210-793313:1:exon
so has part: feature:793667-794121:1:exon
so has part: feature:794162-794232:1:exon

XP_035192471.1
type: Protein
SIO_000068: ncbiprotein

position:794232:1
position: 794232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777854-777893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778909-779000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779234-779284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779406-779465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780396-780517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780758-780855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781405-781475:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781677-781750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782236-782311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:782383-782471:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782868-782962:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:783117-783203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:783327-783436:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:783566-783643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:783750-783826:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:783907-784011:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:784163-784232:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:784339-784420:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:785495-785591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785687-785744:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785919-786091:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:786561-786629:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:787244-787337:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:787418-787513:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:787675-787803:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:788341-788454:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:788669-788844:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:789134-789221:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:789606-789725:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:790249-790315:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:791265-791470:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:793210-793313:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:793667-794121:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:794162-794232:1:exon

CARMIL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: CARMIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: capping protein, Arp2/3 and myosin-I linker protein 2 isoform X2
translation: MLPVRVHSSFSFLEVRDIAVREPSVVVIETDTSSYSFRLMSFDDVEQVVIHVTMSLKKVFPDSSPGTLLKNSPPNLYERIRRVTDSLEEMLQSNQGPCGGFSETYAALCDYNGFAFREEVQWDVDNIYHGQDCREFNLLDFSHLESRDVALSVAALSFNLWFTKLSCKDFRLNQEIAEQLLYMLSKSVTLEELALENSGLRCDFAQRMAQALSRHPDSVLHTINLAGNQLEDRGVIAFSRYFEKRPKGLQGLSLARTMLAAKGMSALCQALAANEAIGSSLRHLDLSGNPGSLAVEDTTSLQSLLGRCASLAHLSLAATDCSLDTLFGALVQGCCASLVHLDLSKNTYSHRKVKAVPPDIKHFFSQARALRHVSVAGTKLPPDAVRAMLQGLAYNSHISDLHLDLSGCELRSAGAQVIQDLIPDASAISDLDLSDNGFDSDMVTLVLSIGRSKSIRHVSLGKNFNIKSKDGLLDVLHRIVQLTQEDDCPLQSLSVAESRLKLGTNVLLSALGSNTSLTALDISGNAMGDTGAKMLAKALQINTKLRTVVWDRNNTTAFGLLEVAQALERNYTLKSMPLPMSDVVQAYRSNPERTEEAVHKLQSCLARNQMRRALPAQTFRLQQGILASSSEQMVNEICLSVQKHVDILSSCPGREVEADILCAEEAIRNANLAVSILPLLYEAGNTPHQSGKLQHKLECLTEEASQTCGREIQAIMQAAMDTAHNLCPPVMQKSGVRDQLVNAMSERIHLQEHLNLSSVLDQMVTDVFSKLNEIKLSVTAAVADCIVDAVLGDLSAAQCKLAESLPTHGPDLLEPAEDDAAALARSRNLSDLAEKGFAVEEYKMALRRKNKHFRSIRPTPTVRSPSELELPASGKARPAATKDAEPAAGALPGTPPAEALMDLPTAGERLEHCTKARPRPNRRHKQPPSKPNVQPVVHENSEDRSITRVDEGLEDFFTKRLISEELPPMVLESGPGSAPLVSSSSRTLKKKIGNFFAFKKPKSSRGSRCEKEPEGSTAAPRSRRSMLSDILRAPSKAGEPGKALSKSEEGALSTEPEHSQTPEAARRIRPKYSREGKSQSLILLPGEDEEALGVRQDKRRHLEKSDGELPNSFEQRVHVMLHRMGVTKGLAAEGKKQQCKDSEIKKAGSDGDIVDSSADSPPSLKARTHSVSTDVALRSAVEPSPAWKALGRQLNAELTGPSWEQPRRCSAGPEQSGQPACREAWSSSLPRPGRSAPPRRISHGGEPAAGTPLPISPRSGTEDNRLTPRLAAPSGRRAVSVHEEQLREPQCLAELGTVTIPLRLRRSPVLKRRPEVASEPSPTSEAGGTTPQDRPRGGLEEPQPGATGYGERPGGLTQTVANAQDSAVDQRSPVPGRGEPALGQ
SIO_010081: CARMIL2
subclass of: SO_0000673
so part of: CARMIL2
location: join(779270..779284,779406..779465,780396..780517,780758..780855,781405..781475,781677..781750,782236..782311,782383..782471,782868..782962,783117..783203,783327..783436,783566..783643,783750..783826,783907..784011,784163..784232,784339..784420,785495..785591,785687..785744,785919..786091,786561..786629,787244..787337,787418..787513,787675..787803,788341..788454,788669..788844,789134..789221,789606..789725,790249..790315,791265..791470,793210..793313,793667..794060,794243..794362,794588..794624,794757..794825,794963..795229,795329..795430,795593..795685,795766..795938)
location: region:779270-795938:1
so has part: feature:779270-779284:1:exon
so has part: feature:779406-779465:1:exon
so has part: feature:780396-780517:1:exon
so has part: feature:780758-780855:1:exon
so has part: feature:781405-781475:1:exon
so has part: feature:781677-781750:1:exon
so has part: feature:782236-782311:1:exon
so has part: feature:782383-782471:1:exon
so has part: feature:782868-782962:1:exon
so has part: feature:783117-783203:1:exon
so has part: feature:783327-783436:1:exon
so has part: feature:783566-783643:1:exon
so has part: feature:783750-783826:1:exon
so has part: feature:783907-784011:1:exon
so has part: feature:784163-784232:1:exon
so has part: feature:784339-784420:1:exon
so has part: feature:785495-785591:1:exon
so has part: feature:785687-785744:1:exon
so has part: feature:785919-786091:1:exon
so has part: feature:786561-786629:1:exon
so has part: feature:787244-787337:1:exon
so has part: feature:787418-787513:1:exon
so has part: feature:787675-787803:1:exon
so has part: feature:788341-788454:1:exon
so has part: feature:788669-788844:1:exon
so has part: feature:789134-789221:1:exon
so has part: feature:789606-789725:1:exon
so has part: feature:790249-790315:1:exon
so has part: feature:791265-791470:1:exon
so has part: feature:793210-793313:1:exon
so has part: feature:793667-794060:1:exon
so has part: feature:794243-794362:1:exon
so has part: feature:794588-794624:1:exon
so has part: feature:794757-794825:1:exon
so has part: feature:794963-795229:1:exon
so has part: feature:795329-795430:1:exon
so has part: feature:795593-795685:1:exon
so has part: feature:795766-795938:1:exon

XP_035192467.1
type: Protein
SIO_000068: ncbiprotein

position:779270:1
position: 779270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779270-779284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779406-779465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780396-780517:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780758-780855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781405-781475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:781677-781750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:782236-782311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:782383-782471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:782868-782962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783117-783203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:783327-783436:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:783566-783643:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:783750-783826:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:783907-784011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:784163-784232:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:784339-784420:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:785495-785591:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:785687-785744:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:785919-786091:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:786561-786629:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:787244-787337:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:787418-787513:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:787675-787803:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:788341-788454:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:788669-788844:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:789134-789221:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:789606-789725:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:790249-790315:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:791265-791470:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:793210-793313:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:793667-794060:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:794243-794362:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:794588-794624:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:794757-794825:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:794963-795229:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:795329-795430:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:795593-795685:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:795766-795938:1:exon

LOC118172579
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(796777..806393)
location: region:796777-806393:-1
so has part: feature:796777-806393:-1:exon
subclass of: SO_0000010

118172579
type: Gene
SIO_000068: ncbigene

position:796777:-1
position: 796777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806393:-1
position: 806393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796777-806393:-1:exon

LOC118172579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172579
product: uncharacterized LOC118172579, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_035336593.1
SIO_010081: LOC118172579
subclass of: SO_0000673
so part of: LOC118172579
location: complement(join(796777..797319,797566..797642,798071..798849,799149..799247,799676..799755,800109..800200,800439..800593,801299..801333,801947..801991,802268..802347,802492..802582,803158..803282,805958..806087,806226..806393))
location: region:796777-806393:-1
so has part: feature:806226-806393:-1:exon
so has part: feature:805958-806087:-1:exon
so has part: feature:803158-803282:-1:exon
so has part: feature:802492-802582:-1:exon
so has part: feature:802268-802347:-1:exon
so has part: feature:801947-801991:-1:exon
so has part: feature:801299-801333:-1:exon
so has part: feature:800439-800593:-1:exon
so has part: feature:800109-800200:-1:exon
so has part: feature:799676-799755:-1:exon
so has part: feature:799149-799247:-1:exon
so has part: feature:798071-798849:-1:exon
so has part: feature:797566-797642:-1:exon
so has part: feature:796777-797319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806226-806393:-1:exon

position:806226:-1
position: 806226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:805958-806087:-1:exon

position:805958:-1
position: 805958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806087:-1
position: 806087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803158-803282:-1:exon

position:803158:-1
position: 803158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803282:-1
position: 803282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:802492-802582:-1:exon

position:802492:-1
position: 802492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802582:-1
position: 802582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:802268-802347:-1:exon

position:802268:-1
position: 802268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802347:-1
position: 802347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:801947-801991:-1:exon

position:801947:-1
position: 801947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801991:-1
position: 801991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:801299-801333:-1:exon

position:801299:-1
position: 801299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801333:-1
position: 801333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:800439-800593:-1:exon

position:800439:-1
position: 800439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800593:-1
position: 800593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:800109-800200:-1:exon

position:800109:-1
position: 800109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800200:-1
position: 800200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:799676-799755:-1:exon

position:799676:-1
position: 799676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799755:-1
position: 799755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:799149-799247:-1:exon

position:799149:-1
position: 799149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799247:-1
position: 799247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:798071-798849:-1:exon

position:798071:-1
position: 798071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798849:-1
position: 798849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:797566-797642:-1:exon

position:797566:-1
position: 797566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797642:-1
position: 797642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:796777-797319:-1:exon

position:797319:-1
position: 797319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118172579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118172579 isoform X1
translation: MAAAACPGGAEATPGARFVYENKSLSTPKVYVLQPWIASLLVNYEKGDASGNLLAGQVLRVLSDSSAPDQAGALQDAELQVSDGSYYIRVVITAEALRAEENTHIHLKLSSLICRIIVLQKYTVCFREEARLEDCEFYLTAHQFIVLPMERQKMDSSNGNHEPSVLQKIKELWLRSISLGSAPSSEPSISQLIDVIGQNQLEALKESAEECLDLQVSKETEKDKLPVTQWEAELKKEPREDIFMVPANILVIPPEEGVVDGDASKAGDVCEASPEKSNYDKTVPGDQTVISQPNSAESTALSGSSETSLDNPWNMLPTMSLTLTSSEEQSFQHSSPCRPEAQQDVAADSNTPDLLESCSHDSPQDLLQADPVQTSSPSLLSSYGSISPVKASTTRATSTAEAAYTSPCAARGPLVSGDSQANLPSLSPAFPVLPSSHLVSHTEGVPHREQADSSGTAFPPDMLKHHPAHSRTQGEAPKESRKAAGARRKQLVGSGPALPDGVGHGRRSLSGLQQKQPRRGASWGTGKEVRRKLESVSTEGAKKIRREEHKSQRREESPEEEEEEEEEQATSVSGPSSRPEQRRVLQPYVKERPLQYKYKAPSPELCEQIRSVRISEAMLKWACWILTDRDVDA
SIO_010081: LOC118172579
subclass of: SO_0000673
so part of: LOC118172579
location: complement(join(797256..797319,797566..797642,798071..798849,799149..799247,799676..799755,800109..800200,800439..800593,801299..801333,801947..801991,802268..802347,802492..802582,803158..803282,805958..806087,806226..806275))
location: region:797256-806275:-1
so has part: feature:806226-806275:-1:exon
so has part: feature:805958-806087:-1:exon
so has part: feature:803158-803282:-1:exon
so has part: feature:802492-802582:-1:exon
so has part: feature:802268-802347:-1:exon
so has part: feature:801947-801991:-1:exon
so has part: feature:801299-801333:-1:exon
so has part: feature:800439-800593:-1:exon
so has part: feature:800109-800200:-1:exon
so has part: feature:799676-799755:-1:exon
so has part: feature:799149-799247:-1:exon
so has part: feature:798071-798849:-1:exon
so has part: feature:797566-797642:-1:exon
so has part: feature:797256-797319:-1:exon

XP_035192484.1
type: Protein
SIO_000068: ncbiprotein

position:797256:-1
position: 797256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806275:-1
position: 806275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806226-806275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805958-806087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803158-803282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:802492-802582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802268-802347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801947-801991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801299-801333:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800439-800593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800109-800200:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799676-799755:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799149-799247:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798071-798849:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:797566-797642:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:797256-797319:-1:exon

LOC118172579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172579
product: uncharacterized LOC118172579, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035336594.1
SIO_010081: LOC118172579
subclass of: SO_0000673
so part of: LOC118172579
location: complement(join(797736..797869,797913..797965,798053..798849,799149..799247,799676..799755,800109..800200,800439..800593,801299..801333,801947..801991,802268..802347,802492..802582,803158..803282,805958..806087,806226..806393))
location: region:797736-806393:-1
so has part: feature:806226-806393:-1:exon
so has part: feature:805958-806087:-1:exon
so has part: feature:803158-803282:-1:exon
so has part: feature:802492-802582:-1:exon
so has part: feature:802268-802347:-1:exon
so has part: feature:801947-801991:-1:exon
so has part: feature:801299-801333:-1:exon
so has part: feature:800439-800593:-1:exon
so has part: feature:800109-800200:-1:exon
so has part: feature:799676-799755:-1:exon
so has part: feature:799149-799247:-1:exon
so has part: feature:798053-798849:-1:exon
so has part: feature:797913-797965:-1:exon
so has part: feature:797736-797869:-1:exon

position:797736:-1
position: 797736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806226-806393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805958-806087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803158-803282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:802492-802582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802268-802347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801947-801991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801299-801333:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800439-800593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800109-800200:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799676-799755:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799149-799247:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798053-798849:-1:exon

position:798053:-1
position: 798053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:797913-797965:-1:exon

position:797913:-1
position: 797913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797965:-1
position: 797965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:797736-797869:-1:exon

position:797869:-1
position: 797869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118172579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118172579 isoform X2
translation: MAAAACPGGAEATPGARFVYENKSLSTPKVYVLQPWIASLLVNYEKGDASGNLLAGQVLRVLSDSSAPDQAGALQDAELQVSDGSYYIRVVITAEALRAEENTHIHLKLSSLICRIIVLQKYTVCFREEARLEDCEFYLTAHQFIVLPMERQKMDSSNGNHEPSVLQKIKELWLRSISLGSAPSSEPSISQLIDVIGQNQLEALKESAEECLDLQVSKETEKDKLPVTQWEAELKKEPREDIFMVPANILVIPPEEGVVDGDASKAGDVCEASPEKSNYDKTVPGDQTVISQPNSAESTALSGSSETSLDNPWNMLPTMSLTLTSSEEQSFQHSSPCRPEAQQDVAADSNTPDLLESCSHDSPQDLLQADPVQTSSPSLLSSYGSISPVKASTTRATSTAEAAYTSPCAARGPLVSGDSQANLPSLSPAFPVLPSSHLVSHTEGVPHREQADSSGTAFPPDMLKHHPAHSRTQGEAPKESRKAAGARRKQLVGSGPALPDGVGHGRRSLSGLQQKQPRRGASWGTGKEVRRKLESVSTEGAKKIRREEHKSQRREESPEEEEEEEEEQATSVSGPSSRPEQRRVLQPVKMKQLGAWLCGRWAAESRHQHRPAELRGAGRTPDTWGTG
SIO_010081: LOC118172579
subclass of: SO_0000673
so part of: LOC118172579
location: complement(join(797818..797869,797913..797965,798053..798849,799149..799247,799676..799755,800109..800200,800439..800593,801299..801333,801947..801991,802268..802347,802492..802582,803158..803282,805958..806087,806226..806275))
location: region:797818-806275:-1
so has part: feature:806226-806275:-1:exon
so has part: feature:805958-806087:-1:exon
so has part: feature:803158-803282:-1:exon
so has part: feature:802492-802582:-1:exon
so has part: feature:802268-802347:-1:exon
so has part: feature:801947-801991:-1:exon
so has part: feature:801299-801333:-1:exon
so has part: feature:800439-800593:-1:exon
so has part: feature:800109-800200:-1:exon
so has part: feature:799676-799755:-1:exon
so has part: feature:799149-799247:-1:exon
so has part: feature:798053-798849:-1:exon
so has part: feature:797913-797965:-1:exon
so has part: feature:797818-797869:-1:exon

XP_035192485.1
type: Protein
SIO_000068: ncbiprotein

position:797818:-1
position: 797818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806226-806275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805958-806087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803158-803282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:802492-802582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802268-802347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801947-801991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801299-801333:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800439-800593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800109-800200:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799676-799755:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799149-799247:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798053-798849:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:797913-797965:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:797818-797869:-1:exon

LOC118172589
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 808132..811231
location: region:808132-811231:1
so has part: feature:808132-811231:1:exon
subclass of: SO_0000010

118172589
type: Gene
SIO_000068: ncbigene

position:808132:1
position: 808132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811231:1
position: 811231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808132-811231:1:exon

LOC118172589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172589
product: C-factor-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_035336614.1
SIO_010081: LOC118172589
subclass of: SO_0000673
so part of: LOC118172589
location: join(808132..808816,809201..809252,809414..809601,809902..810060,810352..810548,810756..811231)
location: region:808132-811231:1
so has part: feature:808132-808816:1:exon
so has part: feature:809201-809252:1:exon
so has part: feature:809414-809601:1:exon
so has part: feature:809902-810060:1:exon
so has part: feature:810352-810548:1:exon
so has part: feature:810756-811231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808132-808816:1:exon

position:808816:1
position: 808816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:809201-809252:1:exon

position:809201:1
position: 809201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809252:1
position: 809252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:809414-809601:1:exon

position:809414:1
position: 809414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809601:1
position: 809601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:809902-810060:1:exon

position:809902:1
position: 809902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810060:1
position: 810060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:810352-810548:1:exon

position:810352:1
position: 810352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810548:1
position: 810548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:810756-811231:1:exon

position:810756:1
position: 810756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118172589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172589
product: C-factor-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_035336613.1
SIO_010081: LOC118172589
subclass of: SO_0000673
so part of: LOC118172589
location: join(808136..808816,809201..809252,809414..809601,809902..810060,810352..810465,810774..810991)
location: region:808136-810991:1
so has part: feature:808136-808816:1:exon
so has part: feature:809201-809252:1:exon
so has part: feature:809414-809601:1:exon
so has part: feature:809902-810060:1:exon
so has part: feature:810352-810465:1:exon
so has part: feature:810774-810991:1:exon

position:808136:1
position: 808136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810991:1
position: 810991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808136-808816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809201-809252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809414-809601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809902-810060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810352-810465:1:exon

position:810465:1
position: 810465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:810774-810991:1:exon

position:810774:1
position: 810774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118172589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172589
product: C-factor-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_035336612.1
SIO_010081: LOC118172589
subclass of: SO_0000673
so part of: LOC118172589
location: join(808137..808816,809201..809252,809414..809601,809902..810060,810352..810471,810780..810991)
location: region:808137-810991:1
so has part: feature:808137-808816:1:exon
so has part: feature:809201-809252:1:exon
so has part: feature:809414-809601:1:exon
so has part: feature:809902-810060:1:exon
so has part: feature:810352-810471:1:exon
so has part: feature:810780-810991:1:exon

position:808137:1
position: 808137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808137-808816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809201-809252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809414-809601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809902-810060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810352-810471:1:exon

position:810471:1
position: 810471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:810780-810991:1:exon

position:810780:1
position: 810780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118172589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-factor-like isoform X1
translation: MGGLRVRSVLVTGANRGIGLGFVRHLLGLPNPPEWVFAACRDPKGQRAQELQNLAFKHSNLVIVPLEVTKPASIKAAAASVEEHLKGSGLNLLINNAGISHYKSFDTKTEEDMSQVYATNTIGPLLMSQAFLPLLKKAAQGSPGSGLSCSKAAIINMSSYAGSIQDVYLWEYGQALSYRCSKAALNMLTKCQSLGYQEHGILCAALHPGWVQTDMGSAAGHTPPMTVDESVGGMLKVISSLSEKDTGTFLDWEGKVVPW
SIO_010081: LOC118172589
subclass of: SO_0000673
so part of: LOC118172589
location: join(808670..808816,809201..809252,809414..809601,809902..810060,810352..810471,810780..810893)
location: region:808670-810893:1
so has part: feature:808670-808816:1:exon
so has part: feature:809201-809252:1:exon
so has part: feature:809414-809601:1:exon
so has part: feature:809902-810060:1:exon
so has part: feature:810352-810471:1:exon
so has part: feature:810780-810893:1:exon

XP_035192503.1
type: Protein
SIO_000068: ncbiprotein

position:808670:1
position: 808670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810893:1
position: 810893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808670-808816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809201-809252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809414-809601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809902-810060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810352-810471:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810780-810893:1:exon

LOC118172589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-factor-like isoform X2
translation: MGGLRVRSVLVTGANRGIGLGFVRHLLGLPNPPEWVFAACRDPKGQRAQELQNLAFKHSNLVIVPLEVTKPASIKAAAASVEEHLKGSGLNLLINNAGISHYKSFDTKTEEDMSQVYATNTIGPLLMSQAFLPLLKKAAQGSPGSGLSCSKAAIINMSSYAGSIQDVYLWEYGQALSYRCSKAALNMLTKCQSLGYQEHGILCAALHPGWVQTDMGSAAGLQPPMTVDESVGGMLKVISSLSEKDTGTFLDWEGKVVPW
SIO_010081: LOC118172589
subclass of: SO_0000673
so part of: LOC118172589
location: join(808670..808816,809201..809252,809414..809601,809902..810060,810352..810465,810774..810893)
location: region:808670-810893:1
so has part: feature:808670-808816:1:exon
so has part: feature:809201-809252:1:exon
so has part: feature:809414-809601:1:exon
so has part: feature:809902-810060:1:exon
so has part: feature:810352-810465:1:exon
so has part: feature:810774-810893:1:exon

XP_035192504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:808670-808816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809201-809252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809414-809601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809902-810060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810352-810465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810774-810893:1:exon

LOC118172589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized oxidoreductase C663.06c-like isoform X3
translation: MGGLRVRSVLVTGANRGIGLGFVRHLLGLPNPPEWVFAACRDPKGQRAQELQNLAFKHSNLVIVPLEVTKPASIKAAAASVEEHLKGSGLNLLINNAGISHYKSFDTKTEEDMSQVYATNTIGPLLMSQAFLPLLKKAAQGSPGSGLSCSKAAIINMSSYAGSIQDVYLWEYGQALSYRCSKAALNMLTKCQSLGYQEHGILCAALHPGWVQTDMGSAAGHTVGALPRQVHPSPCAGFPWEAVVTPSYMFFLCPCSPP
SIO_010081: LOC118172589
subclass of: SO_0000673
so part of: LOC118172589
location: join(808670..808816,809201..809252,809414..809601,809902..810060,810352..810548,810756..810789)
location: region:808670-810789:1
so has part: feature:808670-808816:1:exon
so has part: feature:809201-809252:1:exon
so has part: feature:809414-809601:1:exon
so has part: feature:809902-810060:1:exon
so has part: feature:810352-810548:1:exon
so has part: feature:810756-810789:1:exon

XP_035192505.1
type: Protein
SIO_000068: ncbiprotein

position:810789:1
position: 810789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808670-808816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809201-809252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809414-809601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809902-810060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810352-810548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810756-810789:1:exon

AARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: AARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 817878..832176
location: region:817878-832176:1
so has part: feature:817878-832176:1:exon
subclass of: SO_0000010

118172576
type: Gene
SIO_000068: ncbigene

position:817878:1
position: 817878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832176:1
position: 832176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817878-832176:1:exon

AARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: AARS1
product: alanyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_035336585.1
SIO_010081: AARS1
subclass of: SO_0000673
so part of: AARS1
location: join(817878..817955,818558..818767,819508..819696,820437..820582,821297..821488,822108..822252,822990..823135,823619..823727,823818..823968,824275..824399,824595..824739,825429..825607,826139..826252,826581..826787,827749..827933,828276..828384,829123..829236,829600..829719,830155..830241,831435..831548,831899..832176)
location: region:817878-832176:1
so has part: feature:817878-817955:1:exon
so has part: feature:818558-818767:1:exon
so has part: feature:819508-819696:1:exon
so has part: feature:820437-820582:1:exon
so has part: feature:821297-821488:1:exon
so has part: feature:822108-822252:1:exon
so has part: feature:822990-823135:1:exon
so has part: feature:823619-823727:1:exon
so has part: feature:823818-823968:1:exon
so has part: feature:824275-824399:1:exon
so has part: feature:824595-824739:1:exon
so has part: feature:825429-825607:1:exon
so has part: feature:826139-826252:1:exon
so has part: feature:826581-826787:1:exon
so has part: feature:827749-827933:1:exon
so has part: feature:828276-828384:1:exon
so has part: feature:829123-829236:1:exon
so has part: feature:829600-829719:1:exon
so has part: feature:830155-830241:1:exon
so has part: feature:831435-831548:1:exon
so has part: feature:831899-832176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817878-817955:1:exon

position:817955:1
position: 817955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818558-818767:1:exon

position:818558:1
position: 818558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818767:1
position: 818767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:819508-819696:1:exon

position:819508:1
position: 819508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819696:1
position: 819696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:820437-820582:1:exon

position:820437:1
position: 820437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820582:1
position: 820582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:821297-821488:1:exon

position:821297:1
position: 821297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821488:1
position: 821488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:822108-822252:1:exon

position:822108:1
position: 822108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822252:1
position: 822252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:822990-823135:1:exon

position:822990:1
position: 822990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823135:1
position: 823135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:823619-823727:1:exon

position:823619:1
position: 823619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823727:1
position: 823727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:823818-823968:1:exon

position:823818:1
position: 823818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823968:1
position: 823968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:824275-824399:1:exon

position:824275:1
position: 824275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824399:1
position: 824399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:824595-824739:1:exon

position:824595:1
position: 824595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824739:1
position: 824739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:825429-825607:1:exon

position:825429:1
position: 825429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825607:1
position: 825607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:826139-826252:1:exon

position:826139:1
position: 826139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826252:1
position: 826252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:826581-826787:1:exon

position:826581:1
position: 826581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826787:1
position: 826787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:827749-827933:1:exon

position:827749:1
position: 827749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827933:1
position: 827933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:828276-828384:1:exon

position:828276:1
position: 828276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828384:1
position: 828384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:829123-829236:1:exon

position:829123:1
position: 829123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829236:1
position: 829236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:829600-829719:1:exon

position:829600:1
position: 829600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829719:1
position: 829719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:830155-830241:1:exon

position:830155:1
position: 830155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830241:1
position: 830241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:831435-831548:1:exon

position:831435:1
position: 831435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831548:1
position: 831548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:831899-832176:1:exon

position:831899:1
position: 831899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: AARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alanine--tRNA ligase, cytoplasmic
translation: MESTLTASQIRQRFIDFFKENQHTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLTKEFGIPAERLYVTYFGGNEAAGLQPDLECKQIWLNLGLPEGRILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGDRDASHLVNQDDPNVLEIWNLVFIQFNREADGTLKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYTGQVGAEDADGIDMAYRVLADHARTITLALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEDQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMEGFEEERKNAQLKSQGKGAGGEDLLMLDIYAIEELRAQGLEVTDDSPKYGYTSDPSGTYDFGSLVATVKAIRREKKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDQGYMVKDDDSREDKTEFTVKNVQVRGGYVLHIGTLYGSLKVGDQVLLSIDETRRRPVMSNHTATHILNFALRSVLGEADQRGSLVAPDRLRFDFTAKGALSTQEIKKVEGIANQMIEEAKTVYAKDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLADPSGPAGSITSIEFCGGTHLQNSGHAGHFVIVSEEAIAKGIRRIVAVTGAEARKALRKVDSLKKLLSDLDAKVKVQTAPNKDVQKEITDLSETLATAVIPQWQKDELREAVKALKKVMDDLDRASKADIQKRVLEKTKQVIESHPNQPLVIMEMENGASAKALNESLKLFKTHSPQTATMLFAVDNEAGRITCLCQVPQESVKRGLKASQWVQEVSGLMDGKGGGKDVSAQATGKNVGCLPEALRLATDFARLHLGELKN
SIO_010081: AARS1
subclass of: SO_0000673
so part of: AARS1
location: join(818624..818767,819508..819696,820437..820582,821297..821488,822108..822252,822990..823135,823619..823727,823818..823968,824275..824399,824595..824739,825429..825607,826139..826252,826581..826787,827749..827933,828276..828384,829123..829236,829600..829719,830155..830241,831435..831548,831899..832084)
location: region:818624-832084:1
so has part: feature:818624-818767:1:exon
so has part: feature:819508-819696:1:exon
so has part: feature:820437-820582:1:exon
so has part: feature:821297-821488:1:exon
so has part: feature:822108-822252:1:exon
so has part: feature:822990-823135:1:exon
so has part: feature:823619-823727:1:exon
so has part: feature:823818-823968:1:exon
so has part: feature:824275-824399:1:exon
so has part: feature:824595-824739:1:exon
so has part: feature:825429-825607:1:exon
so has part: feature:826139-826252:1:exon
so has part: feature:826581-826787:1:exon
so has part: feature:827749-827933:1:exon
so has part: feature:828276-828384:1:exon
so has part: feature:829123-829236:1:exon
so has part: feature:829600-829719:1:exon
so has part: feature:830155-830241:1:exon
so has part: feature:831435-831548:1:exon
so has part: feature:831899-832084:1:exon

XP_035192476.1
type: Protein
SIO_000068: ncbiprotein

position:818624:1
position: 818624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832084:1
position: 832084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818624-818767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819508-819696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820437-820582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:821297-821488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822108-822252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822990-823135:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:823619-823727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:823818-823968:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824275-824399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824595-824739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:825429-825607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:826139-826252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:826581-826787:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:827749-827933:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:828276-828384:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:829123-829236:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:829600-829719:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:830155-830241:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:831435-831548:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:831899-832084:1:exon

EXOSC6
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: EXOSC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 832212..833709
location: region:832212-833709:1
so has part: feature:832212-833709:1:exon
subclass of: SO_0000010

118172587
type: Gene
SIO_000068: ncbigene

position:832212:1
position: 832212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833709:1
position: 833709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832212-833709:1:exon

EXOSC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: EXOSC6
product: exosome component 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_035336606.1
SIO_010081: EXOSC6
subclass of: SO_0000673
so part of: EXOSC6
location: 832212..833709
location: region:832212-833709:1
so has part: feature:832212-833709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:832212-833709:1:exon

EXOSC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: EXOSC6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: exosome complex component MTR3
translation: MPLDHRRLRGPDESQPPALWAAGAEEDEDGAGEGEAAGPRDPCALRPLFARAGLLSQAEGSAYVELSGGTKVLCAAWGPREAAERGGGGGGGGGGGGGGXGRLVCEFRRAPFSGRGARPRPGGAAEREAEREAAAALREALEPAVRLARYPRARLAVSALLLQDGGSALAAAVSAASLALADAGVEMYDLAVGCALCRDPGEPAGPWLLQPGEAEERRAAARLTLALLPALNQVSAVLGGGRGGDPESWGQALRLGLDGCHRLYPVLRQSLLRAARRRDAAHSA
SIO_010081: EXOSC6
subclass of: SO_0000673
so part of: EXOSC6
location: 832271..833124
location: region:832271-833124:1
so has part: feature:832271-833124:1:exon

XP_035192497.1
type: Protein
SIO_000068: ncbiprotein

position:832271:1
position: 832271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833124:1
position: 833124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832271-833124:1:exon

LOC118172584
type: Gene
subclass of: SO_0000704
RO_0002162: 8884
gene: LOC118172584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(834381..839826)
location: region:834381-839826:-1
so has part: feature:834381-839826:-1:exon
subclass of: SO_0000010

118172584
type: Gene
SIO_000068: ncbigene

position:834381:-1
position: 834381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839826:-1
position: 839826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834381-839826:-1:exon

LOC118172584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8884
gene: LOC118172584
product: RNA-binding Raly-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_035336601.1
SIO_010081: LOC118172584
subclass of: SO_0000673
so part of: LOC118172584
location: complement(join(834381..834806,834938..835095,835279..835392,835569..835717,835876..835926,837140..837218,839011..839228))
location: region:834381-839228:-1
so has part: feature:839011-839228:-1:exon
so has part: feature:837140-837218:-1:exon
so has part: feature:835876-835926:-1:exon
so has part: feature:835569-835717:-1:exon
so has part: feature:835279-835392:-1:exon
so has part: feature:834938-835095:-1:exon
so has part: feature:834381-834806:-1:exon

position:839228:-1
position: 839228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839011-839228:-1:exon

position:839011:-1
position: 839011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837140-837218:-1:exon

position:837140:-1
position: 837140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837218:-1
position: 837218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:835876-835926:-1:exon

position:835876:-1
position: 835876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835926:-1
position: 835926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835569-835717:-1:exon

position:835569:-1
position: 835569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835717:-1
position: 835717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:835279-835392:-1:exon

position:835279:-1
position: 835279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835392:-1
position: 835392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:834938-835095:-1:exon

position:834938:-1
position: 834938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835095:-1
position: 835095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:834381-834806:-1:exon

position:834806:-1
position: 834806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118172584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8884
gene: LOC118172584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding Raly-like protein isoform X1
translation: MSAAGGRDACWRYLDMAREAKPSRARLGQKRQHSSSLYHGNCDLDYDLYRDDFPYRVYEYQKIPPLINRIPVKARRTHAGAGGKSSPSPQPGARSSSSSTGTRTKLRAEELHSIKGELSQIKAQVDSLLESLDRMDQRRERLSGCKESEKKRAEVGAASPSPGGEGSRGKEGTGGDGRSDLRTIDSAEESTDTEETMRMHISDPEGSH
SIO_010081: LOC118172584
subclass of: SO_0000673
so part of: LOC118172584
location: complement(join(834768..834806,834938..835095,835279..835392,835569..835717,835876..835926,837140..837218,839011..839047))
location: region:834768-839047:-1
so has part: feature:839011-839047:-1:exon
so has part: feature:837140-837218:-1:exon
so has part: feature:835876-835926:-1:exon
so has part: feature:835569-835717:-1:exon
so has part: feature:835279-835392:-1:exon
so has part: feature:834938-835095:-1:exon
so has part: feature:834768-834806:-1:exon

XP_035192492.1
type: Protein
SIO_000068: ncbiprotein

position:834768:-1
position: 834768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839047:-1
position: 839047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839011-839047:-1:exon