Cygnus olor isolate bCygOlo1 chromosome 30, bCygOlo1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Cygnus olor isolate bCygOlo1 chromosome 30, bCygOlo1.pri.v2, whole genome shotgun sequence.
sequence version: NC_054087.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_054087.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA642912
dblink: SAMN12621369
keyword: WGS
keyword: RefSeq
source: Cygnus olor (mute swan)
organism: Cygnus olor
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030310.1.\nAssembly name: bCygOlo1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/31. The original whole-genome shotgun project has the\naccession WNMI00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v. 1.0.3+\n 1.Nov.2018; scaff10x v. 4.1.0; Bionano\n solve v. 3.2.1_04122018; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2020-11-30; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bCygOlo1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.23x\nSequencing Technology :: PacBio Sequel 1 CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cygnus olor Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 834663
topology: linear
so has quality: SO_0000987
location: 1..834663
location: region:1-834663:1
RO_0002162: 8869

NC_054087
type: RefSeq
SIO_000068: refseq

PRJNA642912
type: BioProject
SIO_000068: bioproject

SAMN12621369
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834663:1
position: 834663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-834663:1:source
so part of: sequence
organism: Cygnus olor
mol type: genomic DNA
isolate: bCygOlo1
chromosome: 30
sex: male
tissue type: muscle
dev stage: adult
country: Germany: Mainau
lat lon: 50.149850 N 11.063270 E
collection date: 2015-07-01
collected by: Robert Kraus

8869
type: Taxonomy
SIO_000068: taxonomy

LOC121062492
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6916..9452)
location: region:6916-9452:-1
so has part: feature:6916-9452:-1:exon

121062492
type: Gene
SIO_000068: ncbigene

position:6916:-1
position: 6916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9452:-1
position: 9452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6916-9452:-1:exon

LOC121062492
type: Exon
subclass of: SO_0000147
RO_0002162: 8869
gene: LOC121062492
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC121062492
subclass of: SO_0000673
so part of: LOC121062492
location: complement(6916..6945)
location: region:6916-6945:-1
so has part: feature:6916-6945:-1:exon

position:6945:-1
position: 6945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6916-6945:-1:exon

LOC121062492
type: Exon
subclass of: SO_0000147
RO_0002162: 8869
gene: LOC121062492
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC121062492
subclass of: SO_0000673
so part of: LOC121062492
location: complement(7463..7530)
location: region:7463-7530:-1
so has part: feature:7463-7530:-1:exon

position:7463:-1
position: 7463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7530:-1
position: 7530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7463-7530:-1:exon

LOC121062492
type: Exon
subclass of: SO_0000147
RO_0002162: 8869
gene: LOC121062492
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC121062492
subclass of: SO_0000673
so part of: LOC121062492
location: complement(7676..7966)
location: region:7676-7966:-1
so has part: feature:7676-7966:-1:exon

position:7676:-1
position: 7676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7966:-1
position: 7966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7676-7966:-1:exon

LOC121062492
type: Exon
subclass of: SO_0000147
RO_0002162: 8869
gene: LOC121062492
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC121062492
subclass of: SO_0000673
so part of: LOC121062492
location: complement(8465..9452)
location: region:8465-9452:-1
so has part: feature:8465-9452:-1:exon

position:8465:-1
position: 8465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8465-9452:-1:exon

LOC121062488
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9304..11083)
location: region:9304-11083:-1
so has part: feature:9304-11083:-1:exon
subclass of: SO_0000010

121062488
type: Gene
SIO_000068: ncbigene

position:9304:-1
position: 9304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11083:-1
position: 11083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9304-11083:-1:exon

LOC121062488
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062488
product: ubiquitin carboxyl-terminal hydrolase 42-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040542512.1
SIO_010081: LOC121062488
subclass of: SO_0000673
so part of: LOC121062488
location: complement(join(9304..9340,9413..9567,9896..9990,10793..11083))
location: region:9304-11083:-1
so has part: feature:10793-11083:-1:exon
so has part: feature:9896-9990:-1:exon
so has part: feature:9413-9567:-1:exon
so has part: feature:9304-9340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10793-11083:-1:exon

position:10793:-1
position: 10793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9896-9990:-1:exon

position:9896:-1
position: 9896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9990:-1
position: 9990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9413-9567:-1:exon

position:9413:-1
position: 9413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9567:-1
position: 9567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9304-9340:-1:exon

position:9340:-1
position: 9340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121062488
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 42-like
translation: MACVLKQTITRPSITDTSKKQKITIRIHNKLPARQTVSQPDFLISAVEDVDLYKALPSSTITNSLQIPGAMPPVPGEVIKESLTASQLNSLSEEISVPGPPKSTENDECLEQYQCDDRGDKEKPRRSKEHKLI
SIO_010081: LOC121062488
subclass of: SO_0000673
so part of: LOC121062488
location: complement(join(9453..9567,9896..9990,10793..10984))
location: region:9453-10984:-1
so has part: feature:10793-10984:-1:exon
so has part: feature:9896-9990:-1:exon
so has part: feature:9453-9567:-1:exon

XP_040398446.1
type: Protein
SIO_000068: ncbiprotein

position:9453:-1
position: 9453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10984:-1
position: 10984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10793-10984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9896-9990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9453-9567:-1:exon

LOC121062491
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 19612..42827
location: region:19612-42827:1
so has part: feature:19612-42827:1:exon
subclass of: SO_0000011

121062491
type: Gene
SIO_000068: ncbigene

position:19612:1
position: 19612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42827:1
position: 42827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19612-42827:1:exon

LOC121062491
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121062491
product: uncharacterized LOC121062491
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005815574.1
SIO_010081: LOC121062491
subclass of: SO_0000673
so part of: LOC121062491
location: join(19612..19875,38733..38736,42817..42827)
location: region:19612-42827:1
so has part: feature:19612-19875:1:exon
so has part: feature:38733-38736:1:exon
so has part: feature:42817-42827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19612-19875:1:exon

position:19875:1
position: 19875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38733-38736:1:exon

position:38733:1
position: 38733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38736:1
position: 38736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42817-42827:1:exon

position:42817:1
position: 42817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121062490
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21293..24668
location: region:21293-24668:1
so has part: feature:21293-24668:1:exon
subclass of: SO_0000010

121062490
type: Gene
SIO_000068: ncbigene

position:21293:1
position: 21293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24668:1
position: 24668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21293-24668:1:exon

LOC121062490
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062490
product: ubiquitin carboxyl-terminal hydrolase 42-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040542514.1
SIO_010081: LOC121062490
subclass of: SO_0000673
so part of: LOC121062490
location: join(21293..22173,22956..23154,24261..24371,24532..24668)
location: region:21293-24668:1
so has part: feature:21293-22173:1:exon
so has part: feature:22956-23154:1:exon
so has part: feature:24261-24371:1:exon
so has part: feature:24532-24668:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21293-22173:1:exon

position:22173:1
position: 22173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22956-23154:1:exon

position:22956:1
position: 22956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23154:1
position: 23154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24261-24371:1:exon

position:24261:1
position: 24261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24371:1
position: 24371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24532-24668:1:exon

position:24532:1
position: 24532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121062490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 42-like
translation: MMELLRHKGFFFHLRRYVWIGKKHEVLELACTILATRFLNAALQCLTYTPPLANYMLSLEHSRSCREQDFCMMCTMETHINQALRCTVDAIEPTCVISNLSRIGQHFRLGSQEDAHEFLRYTVDAMQEACLNGSTK
SIO_010081: LOC121062490
subclass of: SO_0000673
so part of: LOC121062490
location: join(22962..23154,24261..24371,24532..24638)
location: region:22962-24638:1
so has part: feature:22962-23154:1:exon
so has part: feature:24261-24371:1:exon
so has part: feature:24532-24638:1:exon

XP_040398448.1
type: Protein
SIO_000068: ncbiprotein

position:22962:1
position: 22962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24638:1
position: 24638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22962-23154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24261-24371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24532-24638:1:exon

AKAP8
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: AKAP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 57289..75513
location: region:57289-75513:1
so has part: feature:57289-75513:1:exon
subclass of: SO_0000010

121062478
type: Gene
SIO_000068: ncbigene

position:57289:1
position: 57289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75513:1
position: 75513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57289-75513:1:exon

AKAP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AKAP8
product: A-kinase anchoring protein 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040542499.1
SIO_010081: AKAP8
subclass of: SO_0000673
so part of: AKAP8
location: join(57289..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65464..65513,66155..66188,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,74557..75513)
location: region:57289-75513:1
so has part: feature:57289-57418:1:exon
so has part: feature:60280-60318:1:exon
so has part: feature:60803-60835:1:exon
so has part: feature:61696-61791:1:exon
so has part: feature:62397-62682:1:exon
so has part: feature:63939-64545:1:exon
so has part: feature:64920-65061:1:exon
so has part: feature:65464-65513:1:exon
so has part: feature:66155-66188:1:exon
so has part: feature:67248-67344:1:exon
so has part: feature:68007-68148:1:exon
so has part: feature:68752-68845:1:exon
so has part: feature:69919-70049:1:exon
so has part: feature:71175-71270:1:exon
so has part: feature:74557-75513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57289-57418:1:exon

position:57418:1
position: 57418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60280-60318:1:exon

position:60280:1
position: 60280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60318:1
position: 60318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60803-60835:1:exon

position:60803:1
position: 60803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60835:1
position: 60835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:61696-61791:1:exon

position:61696:1
position: 61696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61791:1
position: 61791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62397-62682:1:exon

position:62397:1
position: 62397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62682:1
position: 62682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:63939-64545:1:exon

position:63939:1
position: 63939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64545:1
position: 64545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:64920-65061:1:exon

position:64920:1
position: 64920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65061:1
position: 65061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:65464-65513:1:exon

position:65464:1
position: 65464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65513:1
position: 65513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:66155-66188:1:exon

position:66155:1
position: 66155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66188:1
position: 66188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67248-67344:1:exon

position:67248:1
position: 67248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67344:1
position: 67344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:68007-68148:1:exon

position:68007:1
position: 68007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68148:1
position: 68148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:68752-68845:1:exon

position:68752:1
position: 68752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68845:1
position: 68845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:69919-70049:1:exon

position:69919:1
position: 69919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70049:1
position: 70049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:71175-71270:1:exon

position:71175:1
position: 71175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71270:1
position: 71270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:74557-75513:1:exon

position:74557:1
position: 74557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AKAP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AKAP8
product: A-kinase anchoring protein 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040542500.1
SIO_010081: AKAP8
subclass of: SO_0000673
so part of: AKAP8
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AKAP8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: AKAP8
product: A-kinase anchoring protein 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005815569.1
SIO_010081: AKAP8
so part of: AKAP8
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location: region:57289-74693:1
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position:72955:1
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position:73884:1
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urn:…
SIO_000300: 17
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AKAP8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: AKAP8
product: A-kinase anchoring protein 8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005815570.1
SIO_010081: AKAP8
so part of: AKAP8
location: join(57289..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65464..65513,66155..66188,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,72761..72955,74557..74690)
location: region:57289-74690:1
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position:74690:1
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reference: sequence
type: ForwardStrandPosition
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AKAP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AKAP8
product: A-kinase anchoring protein 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040542501.1
SIO_010081: AKAP8
subclass of: SO_0000673
so part of: AKAP8
location: join(57290..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65464..65511,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,74557..75513)
location: region:57290-75513:1
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position:57290:1
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reference: sequence
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urn:…
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AKAP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AKAP8
product: A-kinase anchoring protein 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040542502.1
SIO_010081: AKAP8
subclass of: SO_0000673
so part of: AKAP8
location: join(57290..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65467..65511,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,74557..75513)
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AKAP8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: AKAP8
product: A-kinase anchoring protein 8, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005815571.1
SIO_010081: AKAP8
so part of: AKAP8
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AKAP8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: AKAP8
product: A-kinase anchoring protein 8, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005815572.1
SIO_010081: AKAP8
so part of: AKAP8
location: join(57290..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65467..65511,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,72761..72955,73642..73884,74557..74693)
location: region:57290-74693:1
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urn:…
SIO_000300: 1
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urn:…
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AKAP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AKAP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8 isoform X1
translation: MEQGYGGYGTWSTGASNTQGTYATNAPSWQGMAAKENYEGSSWQTWQSHYESPRTDIAKGAPGYEGYDYYNTQTTAANTAATYNYAAAATSSTWETPKTSEMSMNADVGSAMPVASYGSETVANENSDSIIAKINQRLDMLSKEGSGGTGEGMEDQESSFRFESFESYDSRSSMNDRDMYRSGYDYGEVGADRGDSFGSQFDGRRDQSRNRANNYGLIRGRGQNRVQNRGRLNTFNRSDHFMPSSSSERLSARWNELNYMGGRGMGGAGPNRLPSLFSQALVPDYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYDYGMMGMSGMGTGRYGNVPYGMGRQRNRDRMGAVPWHTNTLTPKRRGFRNRSGGRSDSEGGRKRKQSQSGDEPDSKQAKTDSEGDDTENADEGEGEEKSGDEADKGENGSCGDFAEEASGDGCEDDDEEVKKKREKQRRRDRMRDRAMDRIQFACSVCKFRSFEEEEIQKHLQSKFHKETLRYIGTKLPDKTVEFLQEYIVNRNKKIEKRRQELTEKEGTKQKPDPFKGIGQEHFFKKIEAAHCMACDMLIPAQNHLLQRHLRSADHNRNRRMAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGEDPFTDEITDQDVDEGEALEGGDGGGEGANENTAAEAAQAQEGGAGNTGEATDAAPAAEEMEGPSEELSKSEEFLKHAGEQDQHPKQLLMPPFLQDDDQLEAEEAAEDTSEAAAPSDAVAPSEAAAEADSEEPPSVPETSQEPAAENKTEGWAAKEEEKGEESVSEAAPAACSEQEEEEEGGEEEAPPAATEPQQE
SIO_010081: AKAP8
subclass of: SO_0000673
so part of: AKAP8
location: join(57400..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65464..65513,66155..66188,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,74557..75150)
location: region:57400-75150:1
so has part: feature:57400-57418:1:exon
so has part: feature:60280-60318:1:exon
so has part: feature:60803-60835:1:exon
so has part: feature:61696-61791:1:exon
so has part: feature:62397-62682:1:exon
so has part: feature:63939-64545:1:exon
so has part: feature:64920-65061:1:exon
so has part: feature:65464-65513:1:exon
so has part: feature:66155-66188:1:exon
so has part: feature:67248-67344:1:exon
so has part: feature:68007-68148:1:exon
so has part: feature:68752-68845:1:exon
so has part: feature:69919-70049:1:exon
so has part: feature:71175-71270:1:exon
so has part: feature:74557-75150:1:exon

XP_040398433.1
type: Protein
SIO_000068: ncbiprotein

position:57400:1
position: 57400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75150:1
position: 75150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57400-57418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60280-60318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60803-60835:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61696-61791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62397-62682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63939-64545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64920-65061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65464-65513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66155-66188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67248-67344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68007-68148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68752-68845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69919-70049:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:71175-71270:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74557-75150:1:exon

AKAP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AKAP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8 isoform X3
translation: MEQGYGGYGTWSTGASNTQGTYATNAPSWQGMAAKENYEGSSWQTWQSHYESPRTDIAKGAPGYEGYDYYNTQTTAANTAATYNYAAAATSSTWETPKTSEMSMNADVGSAMPVASYGSETVANENSDSIIAKINQRLDMLSKEGSGGTGEGMEDQESSFRFESFESYDSRSSMNDRDMYRSGYDYGEVGADRGDSFGSQFDGRRDQSRNRANNYGLIRGRGQNRVQNRGRLNTFNRSDHFMPSSSSERLSARWNELNYMGGRGMGGAGPNRLPSLFSQALVPDYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYDYGMMGMSGMGTGRYGNVPYGMGRQRNRDRMGAVPWHTNTLTPKRRGFRNRSGGRSDSEGGRKRKQSQSGDEPDSKQAKTDSEGDDTENADEGEGEEKSGDEADKASGDGCEDDDEEVKKKREKQRRRDRMRDRAMDRIQFACSVCKFRSFEEEEIQKHLQSKFHKETLRYIGTKLPDKTVEFLQEYIVNRNKKIEKRRQELTEKEGTKQKPDPFKGIGQEHFFKKIEAAHCMACDMLIPAQNHLLQRHLRSADHNRNRRMAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGEDPFTDEITDQDVDEGEALEGGDGGGEGANENTAAEAAQAQEGGAGNTGEATDAAPAAEEMEGPSEELSKSEEFLKHAGEQDQHPKQLLMPPFLQDDDQLEAEEAAEDTSEAAAPSDAVAPSEAAAEADSEEPPSVPETSQEPAAENKTEGWAAKEEEKGEESVSEAAPAACSEQEEEEEGGEEEAPPAATEPQQE
SIO_010081: AKAP8
subclass of: SO_0000673
so part of: AKAP8
location: join(57400..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65464..65511,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,74557..75150)
location: region:57400-75150:1
so has part: feature:57400-57418:1:exon
so has part: feature:60280-60318:1:exon
so has part: feature:60803-60835:1:exon
so has part: feature:61696-61791:1:exon
so has part: feature:62397-62682:1:exon
so has part: feature:63939-64545:1:exon
so has part: feature:64920-65061:1:exon
so has part: feature:65464-65511:1:exon
so has part: feature:67248-67344:1:exon
so has part: feature:68007-68148:1:exon
so has part: feature:68752-68845:1:exon
so has part: feature:69919-70049:1:exon
so has part: feature:71175-71270:1:exon
so has part: feature:74557-75150:1:exon

XP_040398435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57400-57418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60280-60318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60803-60835:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61696-61791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62397-62682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63939-64545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64920-65061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65464-65511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67248-67344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68007-68148:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68752-68845:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69919-70049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71175-71270:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74557-75150:1:exon

AKAP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AKAP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8 isoform X2
translation: MEQGYGGYGTWSTGASNTQGTYATNAPSWQGMAAKENYEGSSWQTWQSHYESPRTDIAKGAPGYEGYDYYNTQTTAANTAATYNYAAAATSSTWETPKTSEMSMNADVGSAMPVASYGSETVANENSDSIIAKINQRLDMLSKEGSGGTGEGMEDQESSFRFESFESYDSRSSMNDRDMYRSGYDYGEVGADRGDSFGSQFDGRRDQSRNRANNYGLIRGRGQNRVQNRGRLNTFNRSDHFMPSSSSERLSARWNELNYMGGRGMGGAGPNRLPSLFSQALVPDYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYDYGMMGMSGMGTGRYGNVPYGMGRQRNRDRMGAVPWHTNTLTPKRRGFRNRSGGRSDSEGGRKRKQSQSGDEPDSKQAKTDSEGDDTENDEGEGEEKSGDEADKGENGSCGDFAEEASGDGCEDDDEEVKKKREKQRRRDRMRDRAMDRIQFACSVCKFRSFEEEEIQKHLQSKFHKETLRYIGTKLPDKTVEFLQEYIVNRNKKIEKRRQELTEKEGTKQKPDPFKGIGQEHFFKKIEAAHCMACDMLIPAQNHLLQRHLRSADHNRNRRMAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGEDPFTDEITDQDVDEGEALEGGDGGGEGANENTAAEAAQAQEGGAGNTGEATDAAPAAEEMEGPSEELSKSEEFLKHAGEQDQHPKQLLMPPFLQDDDQLEAEEAAEDTSEAAAPSDAVAPSEAAAEADSEEPPSVPETSQEPAAENKTEGWAAKEEEKGEESVSEAAPAACSEQEEEEEGGEEEAPPAATEPQQE
SIO_010081: AKAP8
subclass of: SO_0000673
so part of: AKAP8
location: join(57400..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65467..65513,66155..66188,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,74557..75150)
location: region:57400-75150:1
so has part: feature:57400-57418:1:exon
so has part: feature:60280-60318:1:exon
so has part: feature:60803-60835:1:exon
so has part: feature:61696-61791:1:exon
so has part: feature:62397-62682:1:exon
so has part: feature:63939-64545:1:exon
so has part: feature:64920-65061:1:exon
so has part: feature:65467-65513:1:exon
so has part: feature:66155-66188:1:exon
so has part: feature:67248-67344:1:exon
so has part: feature:68007-68148:1:exon
so has part: feature:68752-68845:1:exon
so has part: feature:69919-70049:1:exon
so has part: feature:71175-71270:1:exon
so has part: feature:74557-75150:1:exon

XP_040398434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57400-57418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60280-60318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60803-60835:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61696-61791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62397-62682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63939-64545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64920-65061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65467-65513:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:66155-66188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67248-67344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68007-68148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68752-68845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69919-70049:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:71175-71270:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74557-75150:1:exon

AKAP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AKAP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8 isoform X4
translation: MEQGYGGYGTWSTGASNTQGTYATNAPSWQGMAAKENYEGSSWQTWQSHYESPRTDIAKGAPGYEGYDYYNTQTTAANTAATYNYAAAATSSTWETPKTSEMSMNADVGSAMPVASYGSETVANENSDSIIAKINQRLDMLSKEGSGGTGEGMEDQESSFRFESFESYDSRSSMNDRDMYRSGYDYGEVGADRGDSFGSQFDGRRDQSRNRANNYGLIRGRGQNRVQNRGRLNTFNRSDHFMPSSSSERLSARWNELNYMGGRGMGGAGPNRLPSLFSQALVPDYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYDYGMMGMSGMGTGRYGNVPYGMGRQRNRDRMGAVPWHTNTLTPKRRGFRNRSGGRSDSEGGRKRKQSQSGDEPDSKQAKTDSEGDDTENDEGEGEEKSGDEADKASGDGCEDDDEEVKKKREKQRRRDRMRDRAMDRIQFACSVCKFRSFEEEEIQKHLQSKFHKETLRYIGTKLPDKTVEFLQEYIVNRNKKIEKRRQELTEKEGTKQKPDPFKGIGQEHFFKKIEAAHCMACDMLIPAQNHLLQRHLRSADHNRNRRMAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGEDPFTDEITDQDVDEGEALEGGDGGGEGANENTAAEAAQAQEGGAGNTGEATDAAPAAEEMEGPSEELSKSEEFLKHAGEQDQHPKQLLMPPFLQDDDQLEAEEAAEDTSEAAAPSDAVAPSEAAAEADSEEPPSVPETSQEPAAENKTEGWAAKEEEKGEESVSEAAPAACSEQEEEEEGGEEEAPPAATEPQQE
SIO_010081: AKAP8
subclass of: SO_0000673
so part of: AKAP8
location: join(57400..57418,60280..60318,60803..60835,61696..61791,62397..62682,63939..64545,64920..65061,65467..65511,67248..67344,68007..68148,68752..68845,69919..70049,71175..71270,74557..75150)
location: region:57400-75150:1
so has part: feature:57400-57418:1:exon
so has part: feature:60280-60318:1:exon
so has part: feature:60803-60835:1:exon
so has part: feature:61696-61791:1:exon
so has part: feature:62397-62682:1:exon
so has part: feature:63939-64545:1:exon
so has part: feature:64920-65061:1:exon
so has part: feature:65467-65511:1:exon
so has part: feature:67248-67344:1:exon
so has part: feature:68007-68148:1:exon
so has part: feature:68752-68845:1:exon
so has part: feature:69919-70049:1:exon
so has part: feature:71175-71270:1:exon
so has part: feature:74557-75150:1:exon

XP_040398436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57400-57418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60280-60318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60803-60835:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61696-61791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62397-62682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63939-64545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64920-65061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:65467-65511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67248-67344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68007-68148:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68752-68845:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69919-70049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71175-71270:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74557-75150:1:exon

LOC121062480
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75609..78346)
location: region:75609-78346:-1
so has part: feature:75609-78346:-1:exon
subclass of: SO_0000010

121062480
type: Gene
SIO_000068: ncbigene

position:75609:-1
position: 75609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78346:-1
position: 78346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75609-78346:-1:exon

LOC121062480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062480
product: olfactory receptor 10K1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040542503.1
SIO_010081: LOC121062480
subclass of: SO_0000673
so part of: LOC121062480
location: complement(75609..78346)
location: region:75609-78346:-1
so has part: feature:75609-78346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75609-78346:-1:exon

LOC121062480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 10K1-like
translation: MGSENQTMATDFIFLGFSSLAELQKLLFGVFLLLYLLTLSMNTAIMTVIRVERSLHTPMYFFLCVLSFSETCYTLVIVPKMLVDLVAERKAISFLGCAIQMYFFLLLGCSHSFLLAAMGYDRCVAVCRPLAYSSIMTRRLCAQLVAASALSGLLVAQLVTPLVFCSPFQASRQLDHFFCDISPVLRVAFRHTDAGEAIIMALGVFALMVPLTLILASYLFILADVLRIPSAAGRHKAFSTCSAHLAVVVVHYACASLIYLRPGSSSSSGQDALISVTYTILTPLLNPMIYTLRNKDVKAALRKAIRKTQISPECFPGKRSR
SIO_010081: LOC121062480
subclass of: SO_0000673
so part of: LOC121062480
location: complement(76954..77919)
location: region:76954-77919:-1
so has part: feature:76954-77919:-1:exon

XP_040398437.1
type: Protein
SIO_000068: ncbiprotein

position:76954:-1
position: 76954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77919:-1
position: 77919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76954-77919:-1:exon

LOC121062459
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(79359..85081)
location: region:79359-85081:-1
so has part: feature:79359-85081:-1:exon
subclass of: SO_0000010

121062459
type: Gene
SIO_000068: ncbigene

position:79359:-1
position: 79359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85081:-1
position: 85081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79359-85081:-1:exon

LOC121062459
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062459
product: guanylate-binding protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040542461.1
SIO_010081: LOC121062459
subclass of: SO_0000673
so part of: LOC121062459
location: complement(join(79359..79831,79958..80060,80186..80398,82472..82746,83024..83266,83379..83581,83863..83972,84380..84507,84609..84819,84934..85081))
location: region:79359-85081:-1
so has part: feature:84934-85081:-1:exon
so has part: feature:84609-84819:-1:exon
so has part: feature:84380-84507:-1:exon
so has part: feature:83863-83972:-1:exon
so has part: feature:83379-83581:-1:exon
so has part: feature:83024-83266:-1:exon
so has part: feature:82472-82746:-1:exon
so has part: feature:80186-80398:-1:exon
so has part: feature:79958-80060:-1:exon
so has part: feature:79359-79831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84934-85081:-1:exon

position:84934:-1
position: 84934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84609-84819:-1:exon

position:84609:-1
position: 84609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84819:-1
position: 84819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84380-84507:-1:exon

position:84380:-1
position: 84380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84507:-1
position: 84507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83863-83972:-1:exon

position:83863:-1
position: 83863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83972:-1
position: 83972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:83379-83581:-1:exon

position:83379:-1
position: 83379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83581:-1
position: 83581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83024-83266:-1:exon

position:83024:-1
position: 83024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83266:-1
position: 83266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:82472-82746:-1:exon

position:82472:-1
position: 82472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82746:-1
position: 82746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:80186-80398:-1:exon

position:80186:-1
position: 80186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80398:-1
position: 80398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:79958-80060:-1:exon

position:79958:-1
position: 79958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80060:-1
position: 80060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:79359-79831:-1:exon

position:79831:-1
position: 79831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121062459
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like
translation: MASQIQMPEPVCLIKNEKGKGLVVQPEALWLLSGITQPMVVVAIAGPYRSGKSYLLNRLAGQRRGFALGSSVRAHTKGIWMWCVPHPCKPGHTLVLLDTEGLGDTEKGDTKNDTWIFVLAVLLSSTLIYNSKGTIDQQAMDNLHYVLKLTEYVQVKTAPKEAEDEQPGLDRRALFFPNFVWAVRDFTLQLEVDGKEISEDEYLENALKLQDGSSQEAQNYNRLRECIHQLFPERKCFVFDQPARKRDLPRLEELPDEVLDPEFQQQVERFCSYIGQNCLPKTIPGGHKITGSRLGTLVVSYVEAIQSGAVPCLENAVLALAEIENSEAVKEAVALYRGQMEQGLPTETTQELLELHARCEKEAMKLFMARAFAESRERFQAELMVQLEALKDHFWVQNEWASHKKCTAALQELFQDLDRRINDGVYFMSGGYQLFQRDQQALVEQYRALPGKGVKADAVLQDFLQKTESMARTILKVDRELTEKEEQIKNLKAEYERAEQEREAERKREAEREAENLKKLLKKVLRDGKPRQRKQWKEKESMNNHQSKVPWQRGRAQSCGWQAGMAMGAHLAPSRCFLAPLIMMAFFRSRAETKKESCVVCFLFPSTILLNSASPCCKGQGVAVTSMVAAIAPASAFMLSCSWKGN
SIO_010081: LOC121062459
subclass of: SO_0000673
so part of: LOC121062459
location: complement(join(79359..79831,79958..80060,80186..80398,82472..82746,83024..83266,83379..83581,83863..83972,84380..84507,84609..84801))
location: region:79359-84801:-1
so has part: feature:84609-84801:-1:exon
so has part: feature:84380-84507:-1:exon
so has part: feature:83863-83972:-1:exon
so has part: feature:83379-83581:-1:exon
so has part: feature:83024-83266:-1:exon
so has part: feature:82472-82746:-1:exon
so has part: feature:80186-80398:-1:exon
so has part: feature:79958-80060:-1:exon
so has part: feature:79359-79831:-1:exon

XP_040398395.1
type: Protein
SIO_000068: ncbiprotein

position:84801:-1
position: 84801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84609-84801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84380-84507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83863-83972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83379-83581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83024-83266:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82472-82746:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:80186-80398:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79958-80060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79359-79831:-1:exon

GIPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GIPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92526..97413)
location: region:92526-97413:-1
so has part: feature:92526-97413:-1:exon
subclass of: SO_0000010

121062489
type: Gene
SIO_000068: ncbigene

position:92526:-1
position: 92526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97413:-1
position: 97413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92526-97413:-1:exon

GIPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GIPC1
product: GIPC PDZ domain containing family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542513.1
SIO_010081: GIPC1
subclass of: SO_0000673
so part of: GIPC1
location: complement(join(92526..92694,92963..93044,93132..93241,94217..94397,97191..97413))
location: region:92526-97413:-1
so has part: feature:97191-97413:-1:exon
so has part: feature:94217-94397:-1:exon
so has part: feature:93132-93241:-1:exon
so has part: feature:92963-93044:-1:exon
so has part: feature:92526-92694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97191-97413:-1:exon

position:97191:-1
position: 97191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94217-94397:-1:exon

position:94217:-1
position: 94217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94397:-1
position: 94397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93132-93241:-1:exon

position:93132:-1
position: 93132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93241:-1
position: 93241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92963-93044:-1:exon

position:92963:-1
position: 92963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93044:-1
position: 93044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92526-92694:-1:exon

position:92694:-1
position: 92694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GIPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GIPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ domain-containing protein GIPC1
translation: MFCTLNTHKVDMEKLLGGQIGLEDFIFAHTKGQRKEVEVLKSEEALGLTITDNGAGYAFIKRIKEGSVIDRIPVIGVGDMIEAIDGRSLVGARHFEVAKLLKELPKGRPFALRLTEPRKAFDMISQRAAGGRGGGTQLGTGRGTLRLRARGPATVEEQPSAFEERAIAKVDDLLESYMGIRDTELAATMVELGRDARDPDALAQALDSQLGDFAFPDEFVFDVWGAIGDAKVGRC
SIO_010081: GIPC1
subclass of: SO_0000673
so part of: GIPC1
location: complement(join(92543..92694,92963..93044,93132..93241,94217..94397,97191..97373))
location: region:92543-97373:-1
so has part: feature:97191-97373:-1:exon
so has part: feature:94217-94397:-1:exon
so has part: feature:93132-93241:-1:exon
so has part: feature:92963-93044:-1:exon
so has part: feature:92543-92694:-1:exon

XP_040398447.1
type: Protein
SIO_000068: ncbiprotein

position:92543:-1
position: 92543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97373:-1
position: 97373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97191-97373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94217-94397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93132-93241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92963-93044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92543-92694:-1:exon

LOC121062460
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<240484..255778)
location: region:240484-255778:-1
so has part: feature:240484-255778:-1:exon
subclass of: SO_0000010

121062460
type: Gene
SIO_000068: ncbigene

position:240484:-1
position: 240484
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:255778:-1
position: 255778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240484-255778:-1:exon

LOC121062460
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062460
product: neurogenic locus notch homolog protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542462.1
SIO_010081: LOC121062460
subclass of: SO_0000673
so part of: LOC121062460
location: complement(join(<240484..240686,241528..241647,241848..241961,242315..242460,243038..243230,243874..243984,244355..244588,244984..245097,245584..245697,246981..247166,247862..248017,249033..249266,249963..250085,250634..250738,251567..251709,253439..253520,255607..255778))
location: region:240484-255778:-1
so has part: feature:255607-255778:-1:exon
so has part: feature:253439-253520:-1:exon
so has part: feature:251567-251709:-1:exon
so has part: feature:250634-250738:-1:exon
so has part: feature:249963-250085:-1:exon
so has part: feature:249033-249266:-1:exon
so has part: feature:247862-248017:-1:exon
so has part: feature:246981-247166:-1:exon
so has part: feature:245584-245697:-1:exon
so has part: feature:244984-245097:-1:exon
so has part: feature:244355-244588:-1:exon
so has part: feature:243874-243984:-1:exon
so has part: feature:243038-243230:-1:exon
so has part: feature:242315-242460:-1:exon
so has part: feature:241848-241961:-1:exon
so has part: feature:241528-241647:-1:exon
so has part: feature:240484-240686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255607-255778:-1:exon

position:255607:-1
position: 255607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253439-253520:-1:exon

position:253439:-1
position: 253439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253520:-1
position: 253520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251567-251709:-1:exon

position:251567:-1
position: 251567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251709:-1
position: 251709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:250634-250738:-1:exon

position:250634:-1
position: 250634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250738:-1
position: 250738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249963-250085:-1:exon

position:249963:-1
position: 249963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250085:-1
position: 250085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:249033-249266:-1:exon

position:249033:-1
position: 249033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249266:-1
position: 249266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:247862-248017:-1:exon

position:247862:-1
position: 247862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248017:-1
position: 248017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:246981-247166:-1:exon

position:246981:-1
position: 246981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247166:-1
position: 247166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:245584-245697:-1:exon

position:245584:-1
position: 245584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245697:-1
position: 245697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:244984-245097:-1:exon

position:244984:-1
position: 244984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245097:-1
position: 245097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:244355-244588:-1:exon

position:244355:-1
position: 244355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244588:-1
position: 244588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:243874-243984:-1:exon

position:243874:-1
position: 243874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243984:-1
position: 243984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:243038-243230:-1:exon

position:243038:-1
position: 243038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243230:-1
position: 243230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:242315-242460:-1:exon

position:242315:-1
position: 242315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242460:-1
position: 242460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:241848-241961:-1:exon

position:241848:-1
position: 241848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241961:-1
position: 241961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:241528-241647:-1:exon

position:241528:-1
position: 241528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241647:-1
position: 241647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:240484-240686:-1:exon

position:240686:-1
position: 240686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121062460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogenic locus notch homolog protein 3-like
translation: MGRAPGGLPGLVLLLLHLGAAAVLPCPEGTNPCENGGQCVLHPNGRTACLCRPGALGERCQLRDPCVPSPCAHGGLCQSTLHDGTLSHLCLCPPGFRGPSCSLPDPCTPSPCLNGGTCRPLGEGGFECSCLPGFTGQGCDTNVDDCPGHKCQNGGTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCFNSPGAHVCVCVNGWTGESCADNIDDCATAVCFHGATCHDRVASFYCACPMGKTGLLCHLDDACVSNPCHEDAVCDTNPVNGRAICTCPPGFTGGACDQDVDECSIGANPCEHFGRCVNTQGSFECRCGRGYAGPRCESDVNECLSGPCRNQATCLDRIGRFTCICMAGFSGPLCELEVDECQSSPCANGGRCTDLVNGFACSCPPGFSGPTCQTDMDECASTPCQNGAKCIDRPNGYECRCTEGFEGALCERDADDCTPDPCHHGTCVDGIASFSCACAPGFTGYRCELQLDECHSQPCRHGGKCIDRIASYQCNCPPGTAGVNCEVNPDDCASDPCVHGVCQDGIGRYDCVCQPGFTGPRCNVEINECASNPCHDGGTCVDGANGFTCLCPPGTRDAQCRPGTLPCHSSPCTHGTCRDHGDGFSCECEPGWGGPTCAQRGDACASRPCRHGGTCTPLGGGYRCACRQGYQGAQCQVEVDACASGPCRNGGTCVGSAGTHRCLCAPPFTGRACEVVLAPCAPDPCDNGGTCAPTADYGGFTCRCPPGWQGERCQEDVDECGASPCQHGGTCANRPGTFGCLCPPGYGGGVCEHDLDDCDPGERDPPPRGQGLGGGGG
SIO_010081: LOC121062460
subclass of: SO_0000673
so part of: LOC121062460
location: complement(join(<240484..240686,241528..241647,241848..241961,242315..242460,243038..243230,243874..243984,244355..244588,244984..245097,245584..245697,246981..247166,247862..248017,249033..249266,249963..250085,250634..250738,251567..251709,253439..253520,255607..255673))
location: region:240484-255673:-1
so has part: feature:255607-255673:-1:exon
so has part: feature:253439-253520:-1:exon
so has part: feature:251567-251709:-1:exon
so has part: feature:250634-250738:-1:exon
so has part: feature:249963-250085:-1:exon
so has part: feature:249033-249266:-1:exon
so has part: feature:247862-248017:-1:exon
so has part: feature:246981-247166:-1:exon
so has part: feature:245584-245697:-1:exon
so has part: feature:244984-245097:-1:exon
so has part: feature:244355-244588:-1:exon
so has part: feature:243874-243984:-1:exon
so has part: feature:243038-243230:-1:exon
so has part: feature:242315-242460:-1:exon
so has part: feature:241848-241961:-1:exon
so has part: feature:241528-241647:-1:exon
so has part: feature:240484-240686:-1:exon

XP_040398396.1
type: Protein
SIO_000068: ncbiprotein

position:255673:-1
position: 255673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255607-255673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253439-253520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251567-251709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250634-250738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249963-250085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249033-249266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247862-248017:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246981-247166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245584-245697:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244984-245097:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244355-244588:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243874-243984:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243038-243230:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:242315-242460:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:241848-241961:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:241528-241647:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:240484-240686:-1:exon

LOC121062487
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(256642..261518)
location: region:256642-261518:-1
so has part: feature:256642-261518:-1:exon
subclass of: SO_0000010

121062487
type: Gene
SIO_000068: ncbigene

position:256642:-1
position: 256642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261518:-1
position: 261518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256642-261518:-1:exon

LOC121062487
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062487
product: epoxide hydrolase 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040542511.1
SIO_010081: LOC121062487
subclass of: SO_0000673
so part of: LOC121062487
location: complement(join(256642..257451,258069..258217,258383..258486,259062..259381,259461..259546,260078..260371,261354..261518))
location: region:256642-261518:-1
so has part: feature:261354-261518:-1:exon
so has part: feature:260078-260371:-1:exon
so has part: feature:259461-259546:-1:exon
so has part: feature:259062-259381:-1:exon
so has part: feature:258383-258486:-1:exon
so has part: feature:258069-258217:-1:exon
so has part: feature:256642-257451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261354-261518:-1:exon

position:261354:-1
position: 261354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260078-260371:-1:exon

position:260078:-1
position: 260078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260371:-1
position: 260371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:259461-259546:-1:exon

position:259461:-1
position: 259461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259546:-1
position: 259546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:259062-259381:-1:exon

position:259062:-1
position: 259062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259381:-1
position: 259381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:258383-258486:-1:exon

position:258383:-1
position: 258383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258486:-1
position: 258486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258069-258217:-1:exon

position:258069:-1
position: 258069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258217:-1
position: 258217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:256642-257451:-1:exon

position:257451:-1
position: 257451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121062487
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epoxide hydrolase 3-like
translation: MLLSLCTALLAPTRALLALQRLVARLAVAAAVAAAGVAYGLWGLGVLLRRGPRGALRWRVRAEPPPGLADGTYGEHGHLRLKSSGLQLHYVARGPPTAPLMLLLHGFPQNWFCWRHQLLEFSTRYRVVALDLRGCGASEKPPGKESYRPEVLLEDIREVIEVLGTPEGHTGATAGHPKCILVGHDWGGVLAWELAAGHPDVVEKLVIVDASHRAVMARFSAWHPSQLLRSSYMFLFQLPLLPELLLSMADFELLKTFLTGPWTGIQNPARRLTEPELDAYLYGLSQPGGLTPPINYYRNIFGDAPVPRERPPCPVLLLWGARDAFLDARLAPCLRRRMAPAARLHLVPDAGHWLPEDQPDTVNRLLWDFLRGTE
SIO_010081: LOC121062487
subclass of: SO_0000673
so part of: LOC121062487
location: complement(join(257232..257451,258069..258217,258383..258486,259062..259381,259461..259546,260078..260323))
location: region:257232-260323:-1
so has part: feature:260078-260323:-1:exon
so has part: feature:259461-259546:-1:exon
so has part: feature:259062-259381:-1:exon
so has part: feature:258383-258486:-1:exon
so has part: feature:258069-258217:-1:exon
so has part: feature:257232-257451:-1:exon

XP_040398445.1
type: Protein
SIO_000068: ncbiprotein

position:257232:-1
position: 257232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260323:-1
position: 260323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260078-260323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259461-259546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:259062-259381:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:258383-258486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258069-258217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257232-257451:-1:exon

BRD4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(263829..326920)
location: region:263829-326920:-1
so has part: feature:263829-326920:-1:exon
subclass of: SO_0000010

121062494
type: Gene
SIO_000068: ncbigene

position:263829:-1
position: 263829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326920:-1
position: 326920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263829-326920:-1:exon

BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542517.1
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(263829..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303354,312005..312098,326872..326920))
location: region:263829-326920:-1
so has part: feature:326872-326920:-1:exon
so has part: feature:312005-312098:-1:exon
so has part: feature:303238-303354:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:263829-265344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326872-326920:-1:exon

position:326872:-1
position: 326872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:312005-312098:-1:exon

position:312005:-1
position: 312005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312098:-1
position: 312098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303238-303354:-1:exon

position:303238:-1
position: 303238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303354:-1
position: 303354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301278-301596:-1:exon

position:301278:-1
position: 301278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301596:-1
position: 301596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299840-299977:-1:exon

position:299840:-1
position: 299840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299977:-1
position: 299977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297481-297616:-1:exon

position:297481:-1
position: 297481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297616:-1
position: 297616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:292631-292914:-1:exon

position:292631:-1
position: 292631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292914:-1
position: 292914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291718-292077:-1:exon

position:291718:-1
position: 291718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292077:-1
position: 292077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:289439-289567:-1:exon

position:289439:-1
position: 289439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289567:-1
position: 289567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:283630-283839:-1:exon

position:283630:-1
position: 283630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283839:-1
position: 283839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:282713-282912:-1:exon

position:282713:-1
position: 282713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282912:-1
position: 282912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:281386-281687:-1:exon

position:281386:-1
position: 281386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281687:-1
position: 281687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:279982-280092:-1:exon

position:279982:-1
position: 279982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280092:-1
position: 280092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:272450-272502:-1:exon

position:272450:-1
position: 272450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272502:-1
position: 272502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:271847-272231:-1:exon

position:271847:-1
position: 271847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272231:-1
position: 272231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:269720-270265:-1:exon

position:269720:-1
position: 269720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270265:-1
position: 270265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:267781-267890:-1:exon

position:267781:-1
position: 267781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267890:-1
position: 267890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:267433-267595:-1:exon

position:267433:-1
position: 267433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267595:-1
position: 267595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:267191-267321:-1:exon

position:267191:-1
position: 267191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267321:-1
position: 267321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:266599-266810:-1:exon

position:266599:-1
position: 266599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266810:-1
position: 266810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:266090-266366:-1:exon

position:266090:-1
position: 266090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266366:-1
position: 266366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:263829-265344:-1:exon

position:265344:-1
position: 265344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542525.1
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(263829..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281684,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303354,312005..312098,326872..326915))
location: region:263829-326915:-1
so has part: feature:326872-326915:-1:exon
so has part: feature:312005-312098:-1:exon
so has part: feature:303238-303354:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281684:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:263829-265344:-1:exon

position:326915:-1
position: 326915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326872-326915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:312005-312098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303238-303354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:281386-281684:-1:exon

position:281684:-1
position: 281684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:263829-265344:-1:exon

BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542524.1
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(263829..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303354,312005..312098,326046..326387))
location: region:263829-326387:-1
so has part: feature:326046-326387:-1:exon
so has part: feature:312005-312098:-1:exon
so has part: feature:303238-303354:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:263829-265344:-1:exon

position:326387:-1
position: 326387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326046-326387:-1:exon

position:326046:-1
position: 326046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:312005-312098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303238-303354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:263829-265344:-1:exon

BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542522.1
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(263829..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281684,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303354,312005..312098,326046..326159))
location: region:263829-326159:-1
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BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040542526.1
SIO_010081: BRD4
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BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
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SIO_010081: BRD4
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BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040542520.1
SIO_010081: BRD4
subclass of: SO_0000673
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BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040542519.1
SIO_010081: BRD4
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BRD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BRD4
product: bromodomain containing 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040542521.1
SIO_010081: BRD4
subclass of: SO_0000673
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location: region:263829-313903:-1
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so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:263829-265344:-1:exon

position:313903:-1
position: 313903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313886-313903:-1:exon

position:313886:-1
position: 313886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:312005-312098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303238-303354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:263829-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X2
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPSRPPAVSPAISQQPLLPQPPLPQPPQVLLEDEEPPPPHHSLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAVQQLQHQPQQRPMHMQPMSFPSHIPQPQPPPQQHPPPQPPPPPPPQPPQPAKPQQVIQHHPSPRHHKPDPYSTGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281684,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281684:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398456.1
type: Protein
SIO_000068: ncbiprotein

position:265276:-1
position: 265276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303257:-1
position: 303257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265276-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X2
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPSRPPAVSPAISQQPLLPQPPLPQPPQVLLEDEEPPPPHHSLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAVQQLQHQPQQRPMHMQPMSFPSHIPQPQPPPQQHPPPQPPPPPPPQPPQPAKPQQVIQHHPSPRHHKPDPYSTGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281684,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281684:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265276-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X3
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265276-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X1
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPSRPPAVSPAISQQPLLPQPPLPQPPQVLLEDEEPPPPHHSLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAVQQLQHQPQQRPMHMQPMSFPSHIPQPQPPPQQHPPPQPPPPPPPQPPQPAKPQQVIQHHPSPRHHKPDPYSTGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265276-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X1
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPSRPPAVSPAISQQPLLPQPPLPQPPQVLLEDEEPPPPHHSLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAVQQLQHQPQQRPMHMQPMSFPSHIPQPQPPPQQHPPPQPPPPPPPQPPQPAKPQQVIQHHPSPRHHKPDPYSTGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265276-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X1
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPSRPPAVSPAISQQPLLPQPPLPQPPQVLLEDEEPPPPHHSLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAVQQLQHQPQQRPMHMQPMSFPSHIPQPQPPPQQHPPPQPPPPPPPQPPQPAKPQQVIQHHPSPRHHKPDPYSTGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265276-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X1
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPSRPPAVSPAISQQPLLPQPPLPQPPQVLLEDEEPPPPHHSLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAVQQLQHQPQQRPMHMQPMSFPSHIPQPQPPPQQHPPPQPPPPPPPQPPQPAKPQQVIQHHPSPRHHKPDPYSTGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265276-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X1
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPSRPPAVSPAISQQPLLPQPPLPQPPQVLLEDEEPPPPHHSLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAVQQLQHQPQQRPMHMQPMSFPSHIPQPQPPPQQHPPPQPPPPPPPQPPQPAKPQQVIQHHPSPRHHKPDPYSTGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265276-265344:-1:exon

BRD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BRD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X1
translation: MAMYPTRVSGEECNGINSMSAESGPGTRLRNLPVMGDGLEATQMSTTQAQAQPQQGSTVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVQNATQAASPAQTQAPQQNLQSAQTTHSFPSVTPDLIVQMPVMTMVPPQPPAPPPPAPQAPAPPAPAPQPIQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHESSSLPAEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDSKKSKAKEPPPKKAKKSNSNSSTSSSKKEPVTVKNSKPPPAYESEEEEKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKLKKKGHSGREQKKHHHHHHPPVQQQQQQPPQQPPPPPQQQPPPPPPPQPLPPQQLQPQQPPPPPPVPPQAPPPMKSSPPPFVPAQVPVMEHPLPGNMFDTMPHFTQPIMHLPQPEMPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPSRPPAVSPAISQQPLLPQPPLPQPPQVLLEDEEPPPPHHSLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAVQQLQHQPQQRPMHMQPMSFPSHIPQPQPPPQQHPPPQPPPPPPPQPPQPAKPQQVIQHHPSPRHHKPDPYSTGHLREAPSPLMMHSPQMPPFQGLVHQSPPQQNIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNAPPPGVQDKDRQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERLRREQERMRSRDDEDAMEQARRVHEEVRRRQEQQQQQQQQQQQQQQQQQQQQQQQQQQQVPPATASAPQGQSSQPQSSQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: BRD4
subclass of: SO_0000673
so part of: BRD4
location: complement(join(265276..265344,266090..266366,266599..266810,267191..267321,267433..267595,267781..267890,269720..270265,271847..272231,272450..272502,279982..280092,281386..281687,282713..282912,283630..283839,289439..289567,291718..292077,292631..292914,297481..297616,299840..299977,301278..301596,303238..303257))
location: region:265276-303257:-1
so has part: feature:303238-303257:-1:exon
so has part: feature:301278-301596:-1:exon
so has part: feature:299840-299977:-1:exon
so has part: feature:297481-297616:-1:exon
so has part: feature:292631-292914:-1:exon
so has part: feature:291718-292077:-1:exon
so has part: feature:289439-289567:-1:exon
so has part: feature:283630-283839:-1:exon
so has part: feature:282713-282912:-1:exon
so has part: feature:281386-281687:-1:exon
so has part: feature:279982-280092:-1:exon
so has part: feature:272450-272502:-1:exon
so has part: feature:271847-272231:-1:exon
so has part: feature:269720-270265:-1:exon
so has part: feature:267781-267890:-1:exon
so has part: feature:267433-267595:-1:exon
so has part: feature:267191-267321:-1:exon
so has part: feature:266599-266810:-1:exon
so has part: feature:266090-266366:-1:exon
so has part: feature:265276-265344:-1:exon

XP_040398458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303238-303257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301278-301596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299840-299977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297481-297616:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292631-292914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291718-292077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289439-289567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283630-283839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282713-282912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281386-281687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279982-280092:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272450-272502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271847-272231:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269720-270265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267781-267890:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267433-267595:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267191-267321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266599-266810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:266090-266366:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265276-265344:-1:exon

LOC121062495
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 333839..345348
location: region:333839-345348:1
so has part: feature:333839-345348:1:exon
subclass of: SO_0000010

121062495
type: Gene
SIO_000068: ncbigene

position:333839:1
position: 333839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345348:1
position: 345348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333839-345348:1:exon

LOC121062495
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062495
product: uncharacterized LOC121062495
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040542527.1
SIO_010081: LOC121062495
subclass of: SO_0000673
so part of: LOC121062495
location: join(333839..335458,335981..336060,336273..336398,336705..336784,337022..337142,337455..337541,338008..338112,338535..338703,339398..339489,339932..340081,340262..340416,340808..340955,341255..341392,341841..342017,342267..342422,343432..343533,343904..344006,344186..344245,344882..345348)
location: region:333839-345348:1
so has part: feature:333839-335458:1:exon
so has part: feature:335981-336060:1:exon
so has part: feature:336273-336398:1:exon
so has part: feature:336705-336784:1:exon
so has part: feature:337022-337142:1:exon
so has part: feature:337455-337541:1:exon
so has part: feature:338008-338112:1:exon
so has part: feature:338535-338703:1:exon
so has part: feature:339398-339489:1:exon
so has part: feature:339932-340081:1:exon
so has part: feature:340262-340416:1:exon
so has part: feature:340808-340955:1:exon
so has part: feature:341255-341392:1:exon
so has part: feature:341841-342017:1:exon
so has part: feature:342267-342422:1:exon
so has part: feature:343432-343533:1:exon
so has part: feature:343904-344006:1:exon
so has part: feature:344186-344245:1:exon
so has part: feature:344882-345348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333839-335458:1:exon

position:335458:1
position: 335458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335981-336060:1:exon

position:335981:1
position: 335981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336060:1
position: 336060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:336273-336398:1:exon

position:336273:1
position: 336273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336398:1
position: 336398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:336705-336784:1:exon

position:336705:1
position: 336705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336784:1
position: 336784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:337022-337142:1:exon

position:337022:1
position: 337022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337142:1
position: 337142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337455-337541:1:exon

position:337455:1
position: 337455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337541:1
position: 337541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:338008-338112:1:exon

position:338008:1
position: 338008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338112:1
position: 338112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:338535-338703:1:exon

position:338535:1
position: 338535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338703:1
position: 338703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:339398-339489:1:exon

position:339398:1
position: 339398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339489:1
position: 339489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:339932-340081:1:exon

position:339932:1
position: 339932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340081:1
position: 340081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:340262-340416:1:exon

position:340262:1
position: 340262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340416:1
position: 340416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:340808-340955:1:exon

position:340808:1
position: 340808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340955:1
position: 340955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:341255-341392:1:exon

position:341255:1
position: 341255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341392:1
position: 341392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:341841-342017:1:exon

position:341841:1
position: 341841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342017:1
position: 342017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:342267-342422:1:exon

position:342267:1
position: 342267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342422:1
position: 342422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:343432-343533:1:exon

position:343432:1
position: 343432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343533:1
position: 343533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:343904-344006:1:exon

position:343904:1
position: 343904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344006:1
position: 344006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:344186-344245:1:exon

position:344186:1
position: 344186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344245:1
position: 344245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:344882-345348:1:exon

position:344882:1
position: 344882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121062495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121062495
translation: MKERRSPRRPRPAWVEARAPQGKRSPDEQHEERTMELMMNEAGRLAVYKREEESVYFILLFVSSTQQDEDLKMQFLRSISNLCRTAKDRGLWRGLSVFCNKYELAEHIKVLLEEEPLEHLRTEVRQQAMLALGNLSYVKSVLDGKKNSIMYVCFNSVFLLPSQEDMKGPNLMRYFKTLDAMDHMLKLFIKNSPITGFWELQNILQILLPFANSHSEAICERAVGRITKLTSWLAASFSPQIHSISGGHKDRYTECNMPVLGQLVGRLLLCHTCKNWQLRWEALDALHYLFRFIQKNRSTAPEDTQEPQEEAEAVFWLPSPTTTDIAMNFGQYLRPSQRTDVILMVIEALRDSSIYDKQEASSVLDMAIQDSASWLTDVPKIMRCIYGSVECISTASARQSLDILILWLTNQWPKKVVRSLLKISPSSDSAALAMWEAMFSQNQTMEKVLREILDVLQDQQLRRLSGFVTDDNCIRHLALLAHADVGQDDLDAMYHLQRLLKRPSLVMHSLALRVLLPVSERPVMARQIPVLLPGIMEGLQAAKADTKMKALLLIGNVMGHVKRKQASSIALQVAGEILPLFNDECSQVQELSICLYNKVMQVVLWCHKRQMKKIVRRGLLPLFFHLSDQTQSVAKASVEALVTAAAFLKREELKRLAQTEQTWRIAECLLVQDKRMVEEYLQQSLPYLQHTQVTLREAAVRFIGLAAQHCKDQSERKIHEICSVLQPLQNDEELSVVSLTTQTIFILRCPRMQPTSRWCLWALCCWPS
SIO_010081: LOC121062495
subclass of: SO_0000673
so part of: LOC121062495
location: join(335338..335458,335981..336060,336273..336398,336705..336784,337022..337142,337455..337541,338008..338112,338535..338703,339398..339489,339932..340081,340262..340416,340808..340955,341255..341392,341841..342017,342267..342422,343432..343533,343904..344006,344186..344245,344882..345018)
location: region:335338-345018:1
so has part: feature:335338-335458:1:exon
so has part: feature:335981-336060:1:exon
so has part: feature:336273-336398:1:exon
so has part: feature:336705-336784:1:exon
so has part: feature:337022-337142:1:exon
so has part: feature:337455-337541:1:exon
so has part: feature:338008-338112:1:exon
so has part: feature:338535-338703:1:exon
so has part: feature:339398-339489:1:exon
so has part: feature:339932-340081:1:exon
so has part: feature:340262-340416:1:exon
so has part: feature:340808-340955:1:exon
so has part: feature:341255-341392:1:exon
so has part: feature:341841-342017:1:exon
so has part: feature:342267-342422:1:exon
so has part: feature:343432-343533:1:exon
so has part: feature:343904-344006:1:exon
so has part: feature:344186-344245:1:exon
so has part: feature:344882-345018:1:exon

XP_040398461.1
type: Protein
SIO_000068: ncbiprotein

position:335338:1
position: 335338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345018:1
position: 345018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335338-335458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335981-336060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336273-336398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336705-336784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337022-337142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337455-337541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338008-338112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338535-338703:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339398-339489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339932-340081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340262-340416:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:340808-340955:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341255-341392:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341841-342017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342267-342422:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:343432-343533:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:343904-344006:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:344186-344245:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:344882-345018:1:exon

SLC44A2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(349109..362029)
location: region:349109-362029:-1
so has part: feature:349109-362029:-1:exon
subclass of: SO_0000010

121062496
type: Gene
SIO_000068: ncbigene

position:349109:-1
position: 349109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362029:-1
position: 362029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349109-362029:-1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 199 long SRA reads, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040542531.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: complement(join(349109..350887,352986..353070,353383..353471,353619..353689,353811..353884,354303..354406,354667..354761,354830..355092,355410..355494,355760..355852,355981..356080,356338..356469,356660..356772,357092..357175,357344..357467,357760..357820,357900..358022,358154..358238,358328..358412,358523..358596,358674..358722,361848..362029))
location: region:349109-362029:-1
so has part: feature:361848-362029:-1:exon
so has part: feature:358674-358722:-1:exon
so has part: feature:358523-358596:-1:exon
so has part: feature:358328-358412:-1:exon
so has part: feature:358154-358238:-1:exon
so has part: feature:357900-358022:-1:exon
so has part: feature:357760-357820:-1:exon
so has part: feature:357344-357467:-1:exon
so has part: feature:357092-357175:-1:exon
so has part: feature:356660-356772:-1:exon
so has part: feature:356338-356469:-1:exon
so has part: feature:355981-356080:-1:exon
so has part: feature:355760-355852:-1:exon
so has part: feature:355410-355494:-1:exon
so has part: feature:354830-355092:-1:exon
so has part: feature:354667-354761:-1:exon
so has part: feature:354303-354406:-1:exon
so has part: feature:353811-353884:-1:exon
so has part: feature:353619-353689:-1:exon
so has part: feature:353383-353471:-1:exon
so has part: feature:352986-353070:-1:exon
so has part: feature:349109-350887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361848-362029:-1:exon

position:361848:-1
position: 361848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358674-358722:-1:exon

position:358674:-1
position: 358674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358722:-1
position: 358722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358523-358596:-1:exon

position:358523:-1
position: 358523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358596:-1
position: 358596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:358328-358412:-1:exon

position:358328:-1
position: 358328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358412:-1
position: 358412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:358154-358238:-1:exon

position:358154:-1
position: 358154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358238:-1
position: 358238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:357900-358022:-1:exon

position:357900:-1
position: 357900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358022:-1
position: 358022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357760-357820:-1:exon

position:357760:-1
position: 357760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357820:-1
position: 357820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:357344-357467:-1:exon

position:357344:-1
position: 357344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357467:-1
position: 357467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:357092-357175:-1:exon

position:357092:-1
position: 357092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357175:-1
position: 357175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:356660-356772:-1:exon

position:356660:-1
position: 356660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356772:-1
position: 356772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:356338-356469:-1:exon

position:356338:-1
position: 356338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356469:-1
position: 356469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:355981-356080:-1:exon

position:355981:-1
position: 355981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356080:-1
position: 356080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:355760-355852:-1:exon

position:355760:-1
position: 355760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355852:-1
position: 355852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:355410-355494:-1:exon

position:355410:-1
position: 355410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355494:-1
position: 355494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:354830-355092:-1:exon

position:354830:-1
position: 354830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355092:-1
position: 355092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:354667-354761:-1:exon

position:354667:-1
position: 354667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354761:-1
position: 354761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:354303-354406:-1:exon

position:354303:-1
position: 354303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354406:-1
position: 354406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:353811-353884:-1:exon

position:353811:-1
position: 353811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353884:-1
position: 353884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:353619-353689:-1:exon

position:353619:-1
position: 353619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353689:-1
position: 353689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:353383-353471:-1:exon

position:353383:-1
position: 353383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353471:-1
position: 353471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:352986-353070:-1:exon

position:352986:-1
position: 352986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353070:-1
position: 353070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:349109-350887:-1:exon

position:350887:-1
position: 350887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040542529.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: complement(join(349109..352590,352986..353070,353383..353471,353619..353689,353811..353884,354303..354406,354667..354761,354830..355092,355410..355494,355760..355852,355981..356080,356338..356469,356660..356772,357092..357175,357344..357467,357760..357820,357900..358022,358154..358238,358328..358412,358523..358596,358674..358722,361848..362014))
location: region:349109-362014:-1
so has part: feature:361848-362014:-1:exon
so has part: feature:358674-358722:-1:exon
so has part: feature:358523-358596:-1:exon
so has part: feature:358328-358412:-1:exon
so has part: feature:358154-358238:-1:exon
so has part: feature:357900-358022:-1:exon
so has part: feature:357760-357820:-1:exon
so has part: feature:357344-357467:-1:exon
so has part: feature:357092-357175:-1:exon
so has part: feature:356660-356772:-1:exon
so has part: feature:356338-356469:-1:exon
so has part: feature:355981-356080:-1:exon
so has part: feature:355760-355852:-1:exon
so has part: feature:355410-355494:-1:exon
so has part: feature:354830-355092:-1:exon
so has part: feature:354667-354761:-1:exon
so has part: feature:354303-354406:-1:exon
so has part: feature:353811-353884:-1:exon
so has part: feature:353619-353689:-1:exon
so has part: feature:353383-353471:-1:exon
so has part: feature:352986-353070:-1:exon
so has part: feature:349109-352590:-1:exon

position:362014:-1
position: 362014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361848-362014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358674-358722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358523-358596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358328-358412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358154-358238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357900-358022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357760-357820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357344-357467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357092-357175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356660-356772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356338-356469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355981-356080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355760-355852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355410-355494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354830-355092:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354667-354761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354303-354406:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353811-353884:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353619-353689:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353383-353471:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:352986-353070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:349109-352590:-1:exon

position:352590:-1
position: 352590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040542528.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: complement(join(349109..352590,352986..353070,353383..353471,353619..353689,353811..353884,354303..354406,354667..354761,354830..355092,355410..355494,355760..355852,355981..356080,356338..356469,356660..356772,357092..357175,357344..357467,357760..357820,357900..358022,358154..358238,358328..358412,358523..358596,358674..358722,360463..361129))
location: region:349109-361129:-1
so has part: feature:360463-361129:-1:exon
so has part: feature:358674-358722:-1:exon
so has part: feature:358523-358596:-1:exon
so has part: feature:358328-358412:-1:exon
so has part: feature:358154-358238:-1:exon
so has part: feature:357900-358022:-1:exon
so has part: feature:357760-357820:-1:exon
so has part: feature:357344-357467:-1:exon
so has part: feature:357092-357175:-1:exon
so has part: feature:356660-356772:-1:exon
so has part: feature:356338-356469:-1:exon
so has part: feature:355981-356080:-1:exon
so has part: feature:355760-355852:-1:exon
so has part: feature:355410-355494:-1:exon
so has part: feature:354830-355092:-1:exon
so has part: feature:354667-354761:-1:exon
so has part: feature:354303-354406:-1:exon
so has part: feature:353811-353884:-1:exon
so has part: feature:353619-353689:-1:exon
so has part: feature:353383-353471:-1:exon
so has part: feature:352986-353070:-1:exon
so has part: feature:349109-352590:-1:exon

position:361129:-1
position: 361129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360463-361129:-1:exon

position:360463:-1
position: 360463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358674-358722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358523-358596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358328-358412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358154-358238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357900-358022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357760-357820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357344-357467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357092-357175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356660-356772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356338-356469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355981-356080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355760-355852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355410-355494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354830-355092:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354667-354761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354303-354406:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353811-353884:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353619-353689:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353383-353471:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:352986-353070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:349109-352590:-1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040542530.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: complement(join(349109..350887,352986..353070,353383..353471,353619..353689,353811..353884,354303..354406,354667..354761,354830..355092,355410..355494,355760..355852,355981..356080,356338..356469,356660..356772,357092..357175,357344..357467,357760..357820,357900..358022,358154..358238,358328..358412,358523..358596,358674..358722,360463..361126))
location: region:349109-361126:-1
so has part: feature:360463-361126:-1:exon
so has part: feature:358674-358722:-1:exon
so has part: feature:358523-358596:-1:exon
so has part: feature:358328-358412:-1:exon
so has part: feature:358154-358238:-1:exon
so has part: feature:357900-358022:-1:exon
so has part: feature:357760-357820:-1:exon
so has part: feature:357344-357467:-1:exon
so has part: feature:357092-357175:-1:exon
so has part: feature:356660-356772:-1:exon
so has part: feature:356338-356469:-1:exon
so has part: feature:355981-356080:-1:exon
so has part: feature:355760-355852:-1:exon
so has part: feature:355410-355494:-1:exon
so has part: feature:354830-355092:-1:exon
so has part: feature:354667-354761:-1:exon
so has part: feature:354303-354406:-1:exon
so has part: feature:353811-353884:-1:exon
so has part: feature:353619-353689:-1:exon
so has part: feature:353383-353471:-1:exon
so has part: feature:352986-353070:-1:exon
so has part: feature:349109-350887:-1:exon

position:361126:-1
position: 361126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360463-361126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358674-358722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358523-358596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358328-358412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358154-358238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357900-358022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357760-357820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357344-357467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357092-357175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356660-356772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356338-356469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355981-356080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355760-355852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355410-355494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354830-355092:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354667-354761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354303-354406:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353811-353884:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353619-353689:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353383-353471:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:352986-353070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:349109-350887:-1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X4
translation: MGERKDPDGAYGTPQKYDPKFKGPIYDRGCTDVACCILLVLAIVGYVVVGIVAWTHGDPRKVIYPTDSRGQFCGHQGTANEDKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYLGAYSSHVPADLQYYRQFCVPEFGDLSKAPIEVLKDKECPAMLIPSTPLARRCLPAIQAKKGVIMVGNETTYDDGRGSRRNVTELLEGARKANVVLEMRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGIMVWVMIVLVILVLGYGIFHCYMEYANLKGEAGSDVSLTDLGFQTDLRVYLHLRQTWLAFMIILCVVEVVIILLLIFLRKRILIAIALIKEASRAVGHIMMSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACQFSGQTCSPEKFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIILQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLILAIVQVIRVILEYLDHRLKAADNKFAKFLLSCLKCCFWCLEKIIKFLNRNAYIMIAVYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTQRIKLVQDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAEKPYFMSPDLKKLLKKTNKGQPEA
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: complement(join(350781..350887,352986..353070,353383..353471,353619..353689,353811..353884,354303..354406,354667..354761,354830..355092,355410..355494,355760..355852,355981..356080,356338..356469,356660..356772,357092..357175,357344..357467,357760..357820,357900..358022,358154..358238,358328..358412,358523..358596,358674..358722,361848..361881))
location: region:350781-361881:-1
so has part: feature:361848-361881:-1:exon
so has part: feature:358674-358722:-1:exon
so has part: feature:358523-358596:-1:exon
so has part: feature:358328-358412:-1:exon
so has part: feature:358154-358238:-1:exon
so has part: feature:357900-358022:-1:exon
so has part: feature:357760-357820:-1:exon
so has part: feature:357344-357467:-1:exon
so has part: feature:357092-357175:-1:exon
so has part: feature:356660-356772:-1:exon
so has part: feature:356338-356469:-1:exon
so has part: feature:355981-356080:-1:exon
so has part: feature:355760-355852:-1:exon
so has part: feature:355410-355494:-1:exon
so has part: feature:354830-355092:-1:exon
so has part: feature:354667-354761:-1:exon
so has part: feature:354303-354406:-1:exon
so has part: feature:353811-353884:-1:exon
so has part: feature:353619-353689:-1:exon
so has part: feature:353383-353471:-1:exon
so has part: feature:352986-353070:-1:exon
so has part: feature:350781-350887:-1:exon

XP_040398465.1
type: Protein
SIO_000068: ncbiprotein

position:350781:-1
position: 350781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361881:-1
position: 361881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361848-361881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358674-358722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358523-358596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358328-358412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358154-358238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357900-358022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357760-357820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357344-357467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357092-357175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356660-356772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356338-356469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355981-356080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355760-355852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355410-355494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354830-355092:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354667-354761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354303-354406:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353811-353884:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353619-353689:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353383-353471:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:352986-353070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:350781-350887:-1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X3
translation: MGDQEEENYYGKHGTPQKYDPKFKGPIYDRGCTDVACCILLVLAIVGYVVVGIVAWTHGDPRKVIYPTDSRGQFCGHQGTANEDKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYLGAYSSHVPADLQYYRQFCVPEFGDLSKAPIEVLKDKECPAMLIPSTPLARRCLPAIQAKKGVIMVGNETTYDDGRGSRRNVTELLEGARKANVVLEMRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGIMVWVMIVLVILVLGYGIFHCYMEYANLKGEAGSDVSLTDLGFQTDLRVYLHLRQTWLAFMIILCVVEVVIILLLIFLRKRILIAIALIKEASRAVGHIMMSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACQFSGQTCSPEKFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIILQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLILAIVQVIRVILEYLDHRLKAADNKFAKFLLSCLKCCFWCLEKIIKFLNRNAYIMIAVYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTQRIKLVQDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAEKPYFMSPDLKKLLKKTNKGQPEA
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: complement(join(350781..350887,352986..353070,353383..353471,353619..353689,353811..353884,354303..354406,354667..354761,354830..355092,355410..355494,355760..355852,355981..356080,356338..356469,356660..356772,357092..357175,357344..357467,357760..357820,357900..358022,358154..358238,358328..358412,358523..358596,358674..358722,360463..360502))
location: region:350781-360502:-1
so has part: feature:360463-360502:-1:exon
so has part: feature:358674-358722:-1:exon
so has part: feature:358523-358596:-1:exon
so has part: feature:358328-358412:-1:exon
so has part: feature:358154-358238:-1:exon
so has part: feature:357900-358022:-1:exon
so has part: feature:357760-357820:-1:exon
so has part: feature:357344-357467:-1:exon
so has part: feature:357092-357175:-1:exon
so has part: feature:356660-356772:-1:exon
so has part: feature:356338-356469:-1:exon
so has part: feature:355981-356080:-1:exon
so has part: feature:355760-355852:-1:exon
so has part: feature:355410-355494:-1:exon
so has part: feature:354830-355092:-1:exon
so has part: feature:354667-354761:-1:exon
so has part: feature:354303-354406:-1:exon
so has part: feature:353811-353884:-1:exon
so has part: feature:353619-353689:-1:exon
so has part: feature:353383-353471:-1:exon
so has part: feature:352986-353070:-1:exon
so has part: feature:350781-350887:-1:exon

XP_040398464.1
type: Protein
SIO_000068: ncbiprotein

position:360502:-1
position: 360502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360463-360502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358674-358722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358523-358596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358328-358412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358154-358238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357900-358022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357760-357820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357344-357467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357092-357175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356660-356772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356338-356469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355981-356080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355760-355852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355410-355494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354830-355092:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354667-354761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354303-354406:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353811-353884:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353619-353689:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353383-353471:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:352986-353070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:350781-350887:-1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X2
translation: MGERKDPDGAYGTPQKYDPKFKGPIYDRGCTDVACCILLVLAIVGYVVVGIVAWTHGDPRKVIYPTDSRGQFCGHQGTANEDKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYLGAYSSHVPADLQYYRQFCVPEFGDLSKAPIEVLKDKECPAMLIPSTPLARRCLPAIQAKKGVIMVGNETTYDDGRGSRRNVTELLEGARKANVVLEMRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGIMVWVMIVLVILVLGYGIFHCYMEYANLKGEAGSDVSLTDLGFQTDLRVYLHLRQTWLAFMIILCVVEVVIILLLIFLRKRILIAIALIKEASRAVGHIMMSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACQFSGQTCSPEKFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIILQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLILAIVQVIRVILEYLDHRLKAADNKFAKFLLSCLKCCFWCLEKIIKFLNRNAYIMIAVYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTQRIKLVQDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSPERPYYMSPELSAILLKGTLEPSKSTDSQG
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: complement(join(352469..352590,352986..353070,353383..353471,353619..353689,353811..353884,354303..354406,354667..354761,354830..355092,355410..355494,355760..355852,355981..356080,356338..356469,356660..356772,357092..357175,357344..357467,357760..357820,357900..358022,358154..358238,358328..358412,358523..358596,358674..358722,361848..361881))
location: region:352469-361881:-1
so has part: feature:361848-361881:-1:exon
so has part: feature:358674-358722:-1:exon
so has part: feature:358523-358596:-1:exon
so has part: feature:358328-358412:-1:exon
so has part: feature:358154-358238:-1:exon
so has part: feature:357900-358022:-1:exon
so has part: feature:357760-357820:-1:exon
so has part: feature:357344-357467:-1:exon
so has part: feature:357092-357175:-1:exon
so has part: feature:356660-356772:-1:exon
so has part: feature:356338-356469:-1:exon
so has part: feature:355981-356080:-1:exon
so has part: feature:355760-355852:-1:exon
so has part: feature:355410-355494:-1:exon
so has part: feature:354830-355092:-1:exon
so has part: feature:354667-354761:-1:exon
so has part: feature:354303-354406:-1:exon
so has part: feature:353811-353884:-1:exon
so has part: feature:353619-353689:-1:exon
so has part: feature:353383-353471:-1:exon
so has part: feature:352986-353070:-1:exon
so has part: feature:352469-352590:-1:exon

XP_040398463.1
type: Protein
SIO_000068: ncbiprotein

position:352469:-1
position: 352469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361848-361881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358674-358722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358523-358596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358328-358412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358154-358238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357900-358022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357760-357820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357344-357467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357092-357175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356660-356772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356338-356469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355981-356080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355760-355852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355410-355494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354830-355092:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354667-354761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354303-354406:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353811-353884:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353619-353689:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353383-353471:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:352986-353070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:352469-352590:-1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X1
translation: MGDQEEENYYGKHGTPQKYDPKFKGPIYDRGCTDVACCILLVLAIVGYVVVGIVAWTHGDPRKVIYPTDSRGQFCGHQGTANEDKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYLGAYSSHVPADLQYYRQFCVPEFGDLSKAPIEVLKDKECPAMLIPSTPLARRCLPAIQAKKGVIMVGNETTYDDGRGSRRNVTELLEGARKANVVLEMRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGIMVWVMIVLVILVLGYGIFHCYMEYANLKGEAGSDVSLTDLGFQTDLRVYLHLRQTWLAFMIILCVVEVVIILLLIFLRKRILIAIALIKEASRAVGHIMMSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACQFSGQTCSPEKFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIILQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLILAIVQVIRVILEYLDHRLKAADNKFAKFLLSCLKCCFWCLEKIIKFLNRNAYIMIAVYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTQRIKLVQDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSPERPYYMSPELSAILLKGTLEPSKSTDSQG
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: complement(join(352469..352590,352986..353070,353383..353471,353619..353689,353811..353884,354303..354406,354667..354761,354830..355092,355410..355494,355760..355852,355981..356080,356338..356469,356660..356772,357092..357175,357344..357467,357760..357820,357900..358022,358154..358238,358328..358412,358523..358596,358674..358722,360463..360502))
location: region:352469-360502:-1
so has part: feature:360463-360502:-1:exon
so has part: feature:358674-358722:-1:exon
so has part: feature:358523-358596:-1:exon
so has part: feature:358328-358412:-1:exon
so has part: feature:358154-358238:-1:exon
so has part: feature:357900-358022:-1:exon
so has part: feature:357760-357820:-1:exon
so has part: feature:357344-357467:-1:exon
so has part: feature:357092-357175:-1:exon
so has part: feature:356660-356772:-1:exon
so has part: feature:356338-356469:-1:exon
so has part: feature:355981-356080:-1:exon
so has part: feature:355760-355852:-1:exon
so has part: feature:355410-355494:-1:exon
so has part: feature:354830-355092:-1:exon
so has part: feature:354667-354761:-1:exon
so has part: feature:354303-354406:-1:exon
so has part: feature:353811-353884:-1:exon
so has part: feature:353619-353689:-1:exon
so has part: feature:353383-353471:-1:exon
so has part: feature:352986-353070:-1:exon
so has part: feature:352469-352590:-1:exon

XP_040398462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360463-360502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358674-358722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358523-358596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358328-358412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358154-358238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357900-358022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357760-357820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357344-357467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357092-357175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356660-356772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356338-356469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355981-356080:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355760-355852:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355410-355494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354830-355092:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354667-354761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354303-354406:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353811-353884:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:353619-353689:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:353383-353471:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:352986-353070:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:352469-352590:-1:exon

ICAM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ICAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(499549..503054)
location: region:499549-503054:-1
so has part: feature:499549-503054:-1:exon
subclass of: SO_0000010

121062486
type: Gene
SIO_000068: ncbigene

position:499549:-1
position: 499549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503054:-1
position: 503054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499549-503054:-1:exon

ICAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ICAM1
product: intercellular adhesion molecule 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040542509.1
SIO_010081: ICAM1
subclass of: SO_0000673
so part of: ICAM1
location: complement(join(499549..499849,499934..500176,500264..500539,500614..500883,500960..501631,502581..502942,502978..503054))
location: region:499549-503054:-1
so has part: feature:502978-503054:-1:exon
so has part: feature:502581-502942:-1:exon
so has part: feature:500960-501631:-1:exon
so has part: feature:500614-500883:-1:exon
so has part: feature:500264-500539:-1:exon
so has part: feature:499934-500176:-1:exon
so has part: feature:499549-499849:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502978-503054:-1:exon

position:502978:-1
position: 502978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:502581-502942:-1:exon

position:502581:-1
position: 502581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502942:-1
position: 502942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500960-501631:-1:exon

position:500960:-1
position: 500960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501631:-1
position: 501631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500614-500883:-1:exon

position:500614:-1
position: 500614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500883:-1
position: 500883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:500264-500539:-1:exon

position:500264:-1
position: 500264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500539:-1
position: 500539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:499934-500176:-1:exon

position:499934:-1
position: 499934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500176:-1
position: 500176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:499549-499849:-1:exon

position:499849:-1
position: 499849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ICAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ICAM1
product: intercellular adhesion molecule 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040542510.1
SIO_010081: ICAM1
subclass of: SO_0000673
so part of: ICAM1
location: complement(join(499549..499849,499934..500176,500264..500539,500614..500883,500960..501277,501356..501631,502581..502942,502978..503050))
location: region:499549-503050:-1
so has part: feature:502978-503050:-1:exon
so has part: feature:502581-502942:-1:exon
so has part: feature:501356-501631:-1:exon
so has part: feature:500960-501277:-1:exon
so has part: feature:500614-500883:-1:exon
so has part: feature:500264-500539:-1:exon
so has part: feature:499934-500176:-1:exon
so has part: feature:499549-499849:-1:exon

position:503050:-1
position: 503050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502978-503050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502581-502942:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501356-501631:-1:exon

position:501356:-1
position: 501356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500960-501277:-1:exon

position:501277:-1
position: 501277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:500614-500883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500264-500539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499934-500176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499549-499849:-1:exon

ICAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ICAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intercellular adhesion molecule 1 isoform X2
translation: MRPAALPLLLCAVTMLAGRLHASFEVFIEPPVLVVEHGGAVRLKCRTTCQDPSATGDVETSFFKHRLEASGQGETVVELRNITEWSSNILCFYSCNKQRKTVSATLIAYRPLEQAVLEPVPQLAVGESHKLVCRVPRVAPVQNLTVILRRGATTLHTATFEHRAENKPQDVEVTHVVTARREDQGQSITCQALLDLWPSNVHFNTTSSPQVLDVYDFPEDPQLEMGEIYLETDEKINVSCSVRHVFPAAHFELSLAGHPLPLHVTEDGLRAVAEVSHAQQGQFGLVCSVRVGPKERQQQASVHVYSFPQPQLNVSTSVPMEGTEVTGRCVLPPGHSPELQLQVTAGPRVLTAWGPSPLAFAWTASEEDDNTKLVCEARMRAGNKPTKRSTPVGLSVTALPRMDDRSCPPSQNWTEGEEVTLRCQARGNPRPHVACDKDGTSVTPGLRHVATRAHTGTFRCRASNALGTAERSITVWVQYHDVDVVLIVVLVLVVLGALVIAGVVYGIYYRKKKMREYQLQKQQRRMEMEKLRSEETVGINGSAPGSQP
SIO_010081: ICAM1
subclass of: SO_0000673
so part of: ICAM1
location: complement(join(499638..499849,499934..500176,500264..500539,500614..500883,500960..501277,501356..501631,502581..502632))
location: region:499638-502632:-1
so has part: feature:502581-502632:-1:exon
so has part: feature:501356-501631:-1:exon
so has part: feature:500960-501277:-1:exon
so has part: feature:500614-500883:-1:exon
so has part: feature:500264-500539:-1:exon
so has part: feature:499934-500176:-1:exon
so has part: feature:499638-499849:-1:exon

XP_040398444.1
type: Protein
SIO_000068: ncbiprotein

position:499638:-1
position: 499638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502632:-1
position: 502632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502581-502632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501356-501631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500960-501277:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500614-500883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500264-500539:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499934-500176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499638-499849:-1:exon

ICAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ICAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intercellular adhesion molecule 1 isoform X1
translation: MRPAALPLLLCAVTMLAGRLHASFEVFIEPPVLVVEHGGAVRLKCRTTCQDPSATGDVETSFFKHRLEASGQGETVVELRNITEWSSNILCFYSCNKQRKTVSATLIAYRKRLWGGATSPGGTERPLHATSCPPPGPLEQAVLEPVPQLAVGESHKLVCRVPRVAPVQNLTVILRRGATTLHTATFEHRAENKPQDVEVTHVVTARREDQGQSITCQALLDLWPSNVHFNTTSSPQVLDVYDFPEDPQLEMGEIYLETDEKINVSCSVRHVFPAAHFELSLAGHPLPLHVTEDGLRAVAEVSHAQQGQFGLVCSVRVGPKERQQQASVHVYSFPQPQLNVSTSVPMEGTEVTGRCVLPPGHSPELQLQVTAGPRVLTAWGPSPLAFAWTASEEDDNTKLVCEARMRAGNKPTKRSTPVGLSVTALPRMDDRSCPPSQNWTEGEEVTLRCQARGNPRPHVACDKDGTSVTPGLRHVATRAHTGTFRCRASNALGTAERSITVWVQYHDVDVVLIVVLVLVVLGALVIAGVVYGIYYRKKKMREYQLQKQQRRMEMEKLRSEETVGINGSAPGSQP
SIO_010081: ICAM1
subclass of: SO_0000673
so part of: ICAM1
location: complement(join(499638..499849,499934..500176,500264..500539,500614..500883,500960..501631,502581..502632))
location: region:499638-502632:-1
so has part: feature:502581-502632:-1:exon
so has part: feature:500960-501631:-1:exon
so has part: feature:500614-500883:-1:exon
so has part: feature:500264-500539:-1:exon
so has part: feature:499934-500176:-1:exon
so has part: feature:499638-499849:-1:exon

XP_040398443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502581-502632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:500960-501631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500614-500883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500264-500539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499934-500176:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499638-499849:-1:exon

MRPL4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MRPL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(507591..514758)
location: region:507591-514758:-1
so has part: feature:507591-514758:-1:exon
subclass of: SO_0000010

121062461
type: Gene
SIO_000068: ncbigene

position:507591:-1
position: 507591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514758:-1
position: 514758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507591-514758:-1:exon

MRPL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MRPL4
product: mitochondrial ribosomal protein L4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040542463.1
SIO_010081: MRPL4
subclass of: SO_0000673
so part of: MRPL4
location: complement(join(507591..507799,507895..507965,508076..508185,508307..508413,508518..508635,509742..509793,511956..512254,514732..514758))
location: region:507591-514758:-1
so has part: feature:514732-514758:-1:exon
so has part: feature:511956-512254:-1:exon
so has part: feature:509742-509793:-1:exon
so has part: feature:508518-508635:-1:exon
so has part: feature:508307-508413:-1:exon
so has part: feature:508076-508185:-1:exon
so has part: feature:507895-507965:-1:exon
so has part: feature:507591-507799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514732-514758:-1:exon

position:514732:-1
position: 514732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511956-512254:-1:exon

position:511956:-1
position: 511956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512254:-1
position: 512254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:509742-509793:-1:exon

position:509742:-1
position: 509742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509793:-1
position: 509793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:508518-508635:-1:exon

position:508518:-1
position: 508518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508635:-1
position: 508635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508307-508413:-1:exon

position:508307:-1
position: 508307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508413:-1
position: 508413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:508076-508185:-1:exon

position:508076:-1
position: 508076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508185:-1
position: 508185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:507895-507965:-1:exon

position:507895:-1
position: 507895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507965:-1
position: 507965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:507591-507799:-1:exon

position:507799:-1
position: 507799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MRPL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L4, mitochondrial
translation: MGSGTSLGTLGTRPEPTRTAGTSGSPSPLPSAELPAPPPSPPAPSPSPSPSSPSPSPSPSPSPVLRACGVPVAPRRVGAQAWLGSLRHPAAERLGLAQLHPDVFAVAPRLDILHAVAMWQKNFKRISYAKVKTRAEVRGGGRKPWRQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYLLPMKVRVLGLKTALTVKLMQDQLHVVDNLEVPTADPRYLQDLARYRHWGSSVLIVDVDEMPENIEKAVAGLKTITLIPVVGLNVHSMLKHQTLVLTVAAVDFLEKKLLWHDTRYSPLYPFSMPYSDIP
SIO_010081: MRPL4
subclass of: SO_0000673
so part of: MRPL4
location: complement(join(507654..507799,507895..507965,508076..508185,508307..508413,508518..508635,509742..509793,511956..512254,514732..514758))
location: region:507654-514758:-1
so has part: feature:514732-514758:-1:exon
so has part: feature:511956-512254:-1:exon
so has part: feature:509742-509793:-1:exon
so has part: feature:508518-508635:-1:exon
so has part: feature:508307-508413:-1:exon
so has part: feature:508076-508185:-1:exon
so has part: feature:507895-507965:-1:exon
so has part: feature:507654-507799:-1:exon

XP_040398397.1
type: Protein
SIO_000068: ncbiprotein

position:507654:-1
position: 507654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514732-514758:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511956-512254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509742-509793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508518-508635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508307-508413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508076-508185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507895-507965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:507654-507799:-1:exon

S1PR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: S1PR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 519319..527506
location: region:519319-527506:1
so has part: feature:519319-527506:1:exon
subclass of: SO_0000010

121062474
type: Gene
SIO_000068: ncbigene

position:519319:1
position: 519319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527506:1
position: 527506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519319-527506:1:exon

S1PR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: S1PR2
product: sphingosine-1-phosphate receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542493.1
SIO_010081: S1PR2
subclass of: SO_0000673
so part of: S1PR2
location: join(519319..519383,525406..527506)
location: region:519319-527506:1
so has part: feature:519319-519383:1:exon
so has part: feature:525406-527506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519319-519383:1:exon

position:519383:1
position: 519383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525406-527506:1:exon

position:525406:1
position: 525406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

S1PR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: S1PR2
product: sphingosine-1-phosphate receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040542492.1
SIO_010081: S1PR2
subclass of: SO_0000673
so part of: S1PR2
location: join(524125..524254,525406..527506)
location: region:524125-527506:1
so has part: feature:524125-524254:1:exon
so has part: feature:525406-527506:1:exon

position:524125:1
position: 524125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524125-524254:1:exon

position:524254:1
position: 524254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525406-527506:1:exon

S1PR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: S1PR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine 1-phosphate receptor 2
translation: MGSIYKEYFNTEKIREHYNFTKEESESSPSASRWAVSILIVVLCCFIVLENLLVLISVCRNKKFHSAMYIFIGNLAFSDLLAGLAFMANILLSGATTFHLTPVQWFVREGTAFATLAASVFSLLAIAIERHVAITKVKVYSSDKNCRMVLLIGACWVIAAAIGSLPIMGWNCMSDLHDCSTVLPLYSKRYILFVITIFTLILLTIVGLYSRIYCIVRSSHAEIASAQTLALLKTVTIVLGAFIICWLPAFIILLMDASCPVRACRILYKANYFFAFATLNSAANPIIYTLRSKDMRREFLRVLCCCGAGRGSEPPGRCMLPLRSSSSLERCTQKHELPTSPITRECTTSV
SIO_010081: S1PR2
subclass of: SO_0000673
so part of: S1PR2
location: 525463..526515
location: region:525463-526515:1
so has part: feature:525463-526515:1:exon

XP_040398426.1
type: Protein
SIO_000068: ncbiprotein

position:525463:1
position: 525463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526515:1
position: 526515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525463-526515:1:exon

S1PR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: S1PR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine 1-phosphate receptor 2
translation: MGSIYKEYFNTEKIREHYNFTKEESESSPSASRWAVSILIVVLCCFIVLENLLVLISVCRNKKFHSAMYIFIGNLAFSDLLAGLAFMANILLSGATTFHLTPVQWFVREGTAFATLAASVFSLLAIAIERHVAITKVKVYSSDKNCRMVLLIGACWVIAAAIGSLPIMGWNCMSDLHDCSTVLPLYSKRYILFVITIFTLILLTIVGLYSRIYCIVRSSHAEIASAQTLALLKTVTIVLGAFIICWLPAFIILLMDASCPVRACRILYKANYFFAFATLNSAANPIIYTLRSKDMRREFLRVLCCCGAGRGSEPPGRCMLPLRSSSSLERCTQKHELPTSPITRECTTSV
SIO_010081: S1PR2
subclass of: SO_0000673
so part of: S1PR2
location: 525463..526515
location: region:525463-526515:1
so has part: feature:525463-526515:1:exon

XP_040398427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525463-526515:1:exon

DNMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 529026..544916
location: region:529026-544916:1
so has part: feature:529026-544916:1:exon
subclass of: SO_0000010

121062472
type: Gene
SIO_000068: ncbigene

position:529026:1
position: 529026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544916:1
position: 544916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529026-544916:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542484.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(529026..529146,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538351..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544916)
location: region:529026-544916:1
so has part: feature:529026-529146:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538351-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529026-529146:1:exon

position:529146:1
position: 529146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

position:532355:1
position: 532355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532397:1
position: 532397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

position:532870:1
position: 532870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532977:1
position: 532977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

position:533076:1
position: 533076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533340:1
position: 533340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

position:533593:1
position: 533593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533665:1
position: 533665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

position:533849:1
position: 533849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533939:1
position: 533939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

position:534062:1
position: 534062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534102:1
position: 534102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

position:534362:1
position: 534362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534413:1
position: 534413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

position:534710:1
position: 534710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534793:1
position: 534793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

position:534879:1
position: 534879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534988:1
position: 534988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

position:535085:1
position: 535085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535203:1
position: 535203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

position:535324:1
position: 535324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535416:1
position: 535416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

position:536005:1
position: 536005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536156:1
position: 536156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

position:536250:1
position: 536250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536437:1
position: 536437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

position:536739:1
position: 536739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536928:1
position: 536928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

position:537348:1
position: 537348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537445:1
position: 537445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

position:537577:1
position: 537577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537724:1
position: 537724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

position:537810:1
position: 537810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537925:1
position: 537925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

position:538050:1
position: 538050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538251:1
position: 538251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:538351-538484:1:exon

position:538351:1
position: 538351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538484:1
position: 538484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

position:538583:1
position: 538583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538756:1
position: 538756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

position:539269:1
position: 539269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539490:1
position: 539490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

position:540102:1
position: 540102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540294:1
position: 540294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

position:540428:1
position: 540428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540518:1
position: 540518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

position:541112:1
position: 541112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541246:1
position: 541246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

position:541398:1
position: 541398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541680:1
position: 541680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

position:541767:1
position: 541767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541908:1
position: 541908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

position:542142:1
position: 542142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542308:1
position: 542308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

position:542389:1
position: 542389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542566:1
position: 542566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

position:542891:1
position: 542891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543086:1
position: 543086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

position:543728:1
position: 543728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543891:1
position: 543891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

position:543974:1
position: 543974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544090:1
position: 544090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

position:544166:1
position: 544166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544256:1
position: 544256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544916:1:exon

position:544435:1
position: 544435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542480.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(529045..529146,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544916)
location: region:529045-544916:1
so has part: feature:529045-529146:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544916:1:exon

position:529045:1
position: 529045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529045-529146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

position:538348:1
position: 538348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542483.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(529045..529146,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544916)
location: region:529045-544916:1
so has part: feature:529045-529146:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529045-529146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542481.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(529045..529146,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538351..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544916)
location: region:529045-544916:1
so has part: feature:529045-529146:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538351-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529045-529146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538351-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X1
translation: MPARAAPLPPAPLPAELRRRLQDLERDEESLSEKESVQEKLSLIQGFLQADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEQGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVKRGRLCAAPWHRRARASVTLLLSQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(529088..529146,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544481)
location: region:529088-544481:1
so has part: feature:529088-529146:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398414.1
type: Protein
SIO_000068: ncbiprotein

position:529088:1
position: 529088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544481:1
position: 544481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529088-529146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X4
translation: MPARAAPLPPAPLPAELRRRLQDLERDEESLSEKESVQEKLSLIQGFLQADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEQGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(529088..529146,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544481)
location: region:529088-544481:1
so has part: feature:529088-529146:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529088-529146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X2
translation: MPARAAPLPPAPLPAELRRRLQDLERDEESLSEKESVQEKLSLIQGFLQADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVKRGRLCAAPWHRRARASVTLLLSQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(529088..529146,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538351..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544481)
location: region:529088-544481:1
so has part: feature:529088-529146:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538351-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529088-529146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538351-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X5
translation: MPARAAPLPPAPLPAELRRRLQDLERDEESLSEKESVQEKLSLIQGFLQADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(529088..529146,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538351..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544481)
location: region:529088-544481:1
so has part: feature:529088-529146:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538351-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529088-529146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538351-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542489.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531664..531942,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538351..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544916)
location: region:531664-544916:1
so has part: feature:531664-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538351-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544916:1:exon

position:531664:1
position: 531664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531664-531942:1:exon

position:531942:1
position: 531942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538351-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542487.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531666..531942,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544916)
location: region:531666-544916:1
so has part: feature:531666-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544916:1:exon

position:531666:1
position: 531666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531666-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542482.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531793..531942,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544916)
location: region:531793-544916:1
so has part: feature:531793-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544916:1:exon

position:531793:1
position: 531793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531793-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542485.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531805..531942,532355..532397,532915..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544916)
location: region:531805-544916:1
so has part: feature:531805-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532915-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544916:1:exon

position:531805:1
position: 531805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531805-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532915-532977:1:exon

position:532915:1
position: 532915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542490.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531805..531942,532355..532397,532915..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544916)
location: region:531805-544916:1
so has part: feature:531805-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532915-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531805-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532915-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542486.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531805..531942,532355..532397,532915..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538351..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544916)
location: region:531805-544916:1
so has part: feature:531805-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532915-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538351-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531805-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532915-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538351-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X3
translation: MAGPSCRLQDLERDEESLSEKESVQEKLSLIQGFLQADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEQGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVKRGRLCAAPWHRRARASVTLLLSQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531923..531942,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544481)
location: region:531923-544481:1
so has part: feature:531923-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398416.1
type: Protein
SIO_000068: ncbiprotein

position:531923:1
position: 531923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531923-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X8
translation: MAGPSCRLQDLERDEESLSEKESVQEKLSLIQGFLQADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEQGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531923..531942,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544481)
location: region:531923-544481:1
so has part: feature:531923-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531923-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X9
translation: MAGPSCRLQDLERDEESLSEKESVQEKLSLIQGFLQADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531923..531942,532355..532397,532870..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538351..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544481)
location: region:531923-544481:1
so has part: feature:531923-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532870-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538351-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531923-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532870-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538351-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X6
translation: MAGPSCRLQDLERDEESLSEKADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEQGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVKRGRLCAAPWHRRARASVTLLLSQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531923..531942,532355..532397,532915..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544481)
location: region:531923-544481:1
so has part: feature:531923-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532915-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531923-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532915-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X10
translation: MAGPSCRLQDLERDEESLSEKADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEQGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531923..531942,532355..532397,532915..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544090,544166..544256,544435..544481)
location: region:531923-544481:1
so has part: feature:531923-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532915-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544090:1:exon
so has part: feature:544166-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531923-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532915-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544090:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544166-544256:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X7
translation: MAGPSCRLQDLERDEESLSEKADVQDQLSELEAKLRCEELSEERYLAKVKALLHRELSAENGDAAPLLRASNGCSKNGAYGSDEDSERAGPDGEEDSAMEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVKRGRLCAAPWHRRARASVTLLLSQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(531923..531942,532355..532397,532915..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538351..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544481)
location: region:531923-544481:1
so has part: feature:531923-531942:1:exon
so has part: feature:532355-532397:1:exon
so has part: feature:532915-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538351-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531923-531942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532915-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538351-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544481:1:exon

DNMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNMT1
product: DNA methyltransferase 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040542491.1
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(532355..532397,532661..532781,532915..532977,533076..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544916)
location: region:532355-544916:1
so has part: feature:532355-532397:1:exon
so has part: feature:532661-532781:1:exon
so has part: feature:532915-532977:1:exon
so has part: feature:533076-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532355-532397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532661-532781:1:exon

position:532661:1
position: 532661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532781:1
position: 532781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532915-532977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533076-533340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544435-544916:1:exon

DNMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 1 isoform X11
translation: MEMEEAAASSSSSTPMPRARKARRSRSNGESKRSPASSRVTRSSGRQPSILSMFSKGSNKRKSEEVNGEVKQEVSAEKEDEEELEEKEQDEKRIKIETKEGSEIKDEITQVKTTTPAKTTPPKCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVTLGKRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEKEDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPVKSDGKKDYYQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSYIHGKVNVIYKAPSENWSMEQGGLDMEIKMVEDDGRTYFYQMWYDQEYARFESPPKTEPTEDNKYKFCMSCTRLDEVRHKEIPKVAEPLEEGDGKMFYALATKNGVQYRVGDGVYLLPEAFSFSMKPASPAKRPKKEAVDEELHPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFCNIRSNGKPNEADIKLRIFKFYRPENTHKSMKASYHADINLLYWSDEETTVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSSGNKGKGKGKGKGKGKGKSSVTCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVKRGRLCAAPWHRRARASVTLLLSQVGNAVPPPLAKAIGLEIKSCVLAKLREDTAAPSAPEKMETVEPAD
SIO_010081: DNMT1
subclass of: SO_0000673
so part of: DNMT1
location: join(533244..533340,533593..533665,533849..533939,534062..534102,534362..534413,534710..534793,534879..534988,535085..535203,535324..535416,536005..536156,536250..536437,536739..536928,537348..537445,537577..537724,537810..537925,538050..538251,538348..538484,538583..538756,539269..539490,540102..540294,540428..540518,541112..541246,541398..541680,541767..541908,542142..542308,542389..542566,542891..543086,543728..543891,543974..544256,544435..544481)
location: region:533244-544481:1
so has part: feature:533244-533340:1:exon
so has part: feature:533593-533665:1:exon
so has part: feature:533849-533939:1:exon
so has part: feature:534062-534102:1:exon
so has part: feature:534362-534413:1:exon
so has part: feature:534710-534793:1:exon
so has part: feature:534879-534988:1:exon
so has part: feature:535085-535203:1:exon
so has part: feature:535324-535416:1:exon
so has part: feature:536005-536156:1:exon
so has part: feature:536250-536437:1:exon
so has part: feature:536739-536928:1:exon
so has part: feature:537348-537445:1:exon
so has part: feature:537577-537724:1:exon
so has part: feature:537810-537925:1:exon
so has part: feature:538050-538251:1:exon
so has part: feature:538348-538484:1:exon
so has part: feature:538583-538756:1:exon
so has part: feature:539269-539490:1:exon
so has part: feature:540102-540294:1:exon
so has part: feature:540428-540518:1:exon
so has part: feature:541112-541246:1:exon
so has part: feature:541398-541680:1:exon
so has part: feature:541767-541908:1:exon
so has part: feature:542142-542308:1:exon
so has part: feature:542389-542566:1:exon
so has part: feature:542891-543086:1:exon
so has part: feature:543728-543891:1:exon
so has part: feature:543974-544256:1:exon
so has part: feature:544435-544481:1:exon

XP_040398425.1
type: Protein
SIO_000068: ncbiprotein

position:533244:1
position: 533244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533244-533340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533593-533665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533849-533939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534062-534102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534362-534413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:534710-534793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534879-534988:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535085-535203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535324-535416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536005-536156:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:536250-536437:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:536739-536928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:537348-537445:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:537577-537724:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:537810-537925:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:538050-538251:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:538348-538484:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:538583-538756:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:539269-539490:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:540102-540294:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:540428-540518:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:541112-541246:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541398-541680:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:541767-541908:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:542142-542308:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:542389-542566:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:542891-543086:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:543728-543891:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:543974-544256:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:544435-544481:1:exon

EIF3G
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: EIF3G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 545021..548263
location: region:545021-548263:1
so has part: feature:545021-548263:1:exon
subclass of: SO_0000010

121062475
type: Gene
SIO_000068: ncbigene

position:545021:1
position: 545021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548263:1
position: 548263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545021-548263:1:exon

EIF3G
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: EIF3G
product: eukaryotic translation initiation factor 3 subunit G
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040542494.1
SIO_010081: EIF3G
subclass of: SO_0000673
so part of: EIF3G
location: join(545021..545133,545370..545419,545866..545958,546049..546137,546293..546352,546541..546645,546729..546918,547017..547124,547238..547374,547963..548069,548190..548263)
location: region:545021-548263:1
so has part: feature:545021-545133:1:exon
so has part: feature:545370-545419:1:exon
so has part: feature:545866-545958:1:exon
so has part: feature:546049-546137:1:exon
so has part: feature:546293-546352:1:exon
so has part: feature:546541-546645:1:exon
so has part: feature:546729-546918:1:exon
so has part: feature:547017-547124:1:exon
so has part: feature:547238-547374:1:exon
so has part: feature:547963-548069:1:exon
so has part: feature:548190-548263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545021-545133:1:exon

position:545133:1
position: 545133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:545370-545419:1:exon

position:545370:1
position: 545370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545419:1
position: 545419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:545866-545958:1:exon

position:545866:1
position: 545866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545958:1
position: 545958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:546049-546137:1:exon

position:546049:1
position: 546049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546137:1
position: 546137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:546293-546352:1:exon

position:546293:1
position: 546293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546352:1
position: 546352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:546541-546645:1:exon

position:546541:1
position: 546541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546645:1
position: 546645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:546729-546918:1:exon

position:546729:1
position: 546729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546918:1
position: 546918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:547017-547124:1:exon

position:547017:1
position: 547017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547124:1
position: 547124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:547238-547374:1:exon

position:547238:1
position: 547238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547374:1
position: 547374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:547963-548069:1:exon

position:547963:1
position: 547963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548069:1
position: 548069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:548190-548263:1:exon

position:548190:1
position: 548190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF3G
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: EIF3G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit G
translation: MPTGDYDSKPSWADQVEEEGGEDDKCITSELLKDIPLTGVLGGSLSAEAELLKGGPLPSPKELINGNIKTITEYREEEDGRKVKIIRTFRIETRKASKAVARRKNWKKFGNSEFDAPGPNVATTTVSDDVFMTFITSKEDLNCQEEEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGEPEPVQAQQSKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKATGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN
SIO_010081: EIF3G
subclass of: SO_0000673
so part of: EIF3G
location: join(545114..545133,545370..545419,545866..545958,546049..546137,546293..546352,546541..546645,546729..546918,547017..547124,547238..547374,547963..548069,548190..548205)
location: region:545114-548205:1
so has part: feature:545114-545133:1:exon
so has part: feature:545370-545419:1:exon
so has part: feature:545866-545958:1:exon
so has part: feature:546049-546137:1:exon
so has part: feature:546293-546352:1:exon
so has part: feature:546541-546645:1:exon
so has part: feature:546729-546918:1:exon
so has part: feature:547017-547124:1:exon
so has part: feature:547238-547374:1:exon
so has part: feature:547963-548069:1:exon
so has part: feature:548190-548205:1:exon

XP_040398428.1
type: Protein
SIO_000068: ncbiprotein

position:545114:1
position: 545114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548205:1
position: 548205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545114-545133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545370-545419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545866-545958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546049-546137:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546293-546352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546541-546645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546729-546918:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547017-547124:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547238-547374:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547963-548069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548190-548205:1:exon

LOC121062462
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(548332..553788)
location: region:548332-553788:-1
so has part: feature:548332-553788:-1:exon
subclass of: SO_0000010

121062462
type: Gene
SIO_000068: ncbigene

position:548332:-1
position: 548332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553788:-1
position: 553788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548332-553788:-1:exon

LOC121062462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062462
product: uncharacterized LOC121062462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040542464.1
SIO_010081: LOC121062462
subclass of: SO_0000673
so part of: LOC121062462
location: complement(join(548332..549684,550081..550395,550617..550774,550849..550978,551066..551144,551255..551378,551462..551569,551700..551776,551852..552022,552102..552152,552411..552512,552626..552796,553684..553788))
location: region:548332-553788:-1
so has part: feature:553684-553788:-1:exon
so has part: feature:552626-552796:-1:exon
so has part: feature:552411-552512:-1:exon
so has part: feature:552102-552152:-1:exon
so has part: feature:551852-552022:-1:exon
so has part: feature:551700-551776:-1:exon
so has part: feature:551462-551569:-1:exon
so has part: feature:551255-551378:-1:exon
so has part: feature:551066-551144:-1:exon
so has part: feature:550849-550978:-1:exon
so has part: feature:550617-550774:-1:exon
so has part: feature:550081-550395:-1:exon
so has part: feature:548332-549684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553684-553788:-1:exon

position:553684:-1
position: 553684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552626-552796:-1:exon

position:552626:-1
position: 552626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552796:-1
position: 552796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552411-552512:-1:exon

position:552411:-1
position: 552411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552512:-1
position: 552512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552102-552152:-1:exon

position:552102:-1
position: 552102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552152:-1
position: 552152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551852-552022:-1:exon

position:551852:-1
position: 551852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552022:-1
position: 552022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551700-551776:-1:exon

position:551700:-1
position: 551700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551776:-1
position: 551776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:551462-551569:-1:exon

position:551462:-1
position: 551462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551569:-1
position: 551569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:551255-551378:-1:exon

position:551255:-1
position: 551255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551378:-1
position: 551378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:551066-551144:-1:exon

position:551066:-1
position: 551066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551144:-1
position: 551144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:550849-550978:-1:exon

position:550849:-1
position: 550849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550978:-1
position: 550978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:550617-550774:-1:exon

position:550617:-1
position: 550617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550774:-1
position: 550774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:550081-550395:-1:exon

position:550081:-1
position: 550081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550395:-1
position: 550395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:548332-549684:-1:exon

position:549684:-1
position: 549684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121062462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121062462
translation: MGRPSKTKNQKKERAAALQQAQQDFGTVPHSFVFHRGRVGKNVRQLILDVRRVMEPYTARALKVRKKNSMKDFVAVAGPLGVTHFLVFSKSSSSINFKLFRLPGGPTLTFKVTQYSLIKDVVSSLKRHRMHEQQFTQHPLLVLSNFGLQQIHVKLMASMFQNMFPSINVHKVNLNSIKRCLLVSYDAETQLLDFRHYSVKVVPVGVSKGLKKLLQEKFPNMSRLEDISELLVKDINLSESEAEQDGTHNILELPQAYAGRGNMKAQQSAVRLTEIGPRMTLQLVKVEEGLAQGDVLFHSFIHKTEAEVQEILARKEAKLRLKTERRRQQEAAVERKRQQREAHREKSLAGIRRKRQRDGDSDAEDPGAPEQQDPAGQSDESDAEYYRQEVGEEPDEDLFPNRTKKPRGPSGSAVPRKRRRRSQQEQPGAPKPRPAAPGKPRKKGPVRTDSKPQGAAGRKAGRGSERPAREGRGHGPKRRGKLLTRGKTIFRRPGHVKKGKRSRGAGAGPRRGERAEFRGCGGTRRSPSTQSSGCSAGQGDASCPRKTPPPQGARPASPALPPTAPHRGSDPKTVAPLALLREGDAGSPRGMANATSGSPCSNFSRSQEVLWPVLAAQFPPALLGNAFAVFRLARERPWPVPVVYSFHLALSGALYSLSLPALAAYYRPPKRWSYGAALCKLERFLFNCNLYGGTFFVACIALNRYLGIVYPLRLRGRLSSRHAQALSAAVWALAAGLSAPTLYFSELQEDDGAAECLGSASRERLPRFLAYSLLLAALGCALPFLLTAFCYGAVARVVFRNPRLGPLEKRRVGVLAGASVALYAFSYLPYHAFRNLNLWRRCRLRPPLEDCGVSRAVHAAAQLGKILVNFNVCLHPLLYAALADSVRCSCCCSCSCCREERGERLELRPRSAAGARNGGGEAPEPQDRNSLPGEGGDAGD
SIO_010081: LOC121062462
subclass of: SO_0000673
so part of: LOC121062462
location: complement(join(548366..549684,550081..550395,550617..550774,550849..550978,551066..551144,551255..551378,551462..551569,551700..551776,551852..552022,552102..552152,552411..552512,552626..552796,553684..553701))
location: region:548366-553701:-1
so has part: feature:553684-553701:-1:exon
so has part: feature:552626-552796:-1:exon
so has part: feature:552411-552512:-1:exon
so has part: feature:552102-552152:-1:exon
so has part: feature:551852-552022:-1:exon
so has part: feature:551700-551776:-1:exon
so has part: feature:551462-551569:-1:exon
so has part: feature:551255-551378:-1:exon
so has part: feature:551066-551144:-1:exon
so has part: feature:550849-550978:-1:exon
so has part: feature:550617-550774:-1:exon
so has part: feature:550081-550395:-1:exon
so has part: feature:548366-549684:-1:exon

XP_040398398.1
type: Protein
SIO_000068: ncbiprotein

position:548366:-1
position: 548366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553701:-1
position: 553701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553684-553701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552626-552796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552411-552512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552102-552152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551852-552022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551700-551776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551462-551569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551255-551378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:551066-551144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:550849-550978:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:550617-550774:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:550081-550395:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:548366-549684:-1:exon

RDH8
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RDH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(554860..559918)
location: region:554860-559918:-1
so has part: feature:554860-559918:-1:exon
subclass of: SO_0000010

121062476
type: Gene
SIO_000068: ncbigene

position:554860:-1
position: 554860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559918:-1
position: 559918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554860-559918:-1:exon

RDH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RDH8
product: retinol dehydrogenase 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040542496.1
SIO_010081: RDH8
subclass of: SO_0000673
so part of: RDH8
location: complement(join(554860..555312,555415..555598,555677..555770,555845..556024,556121..556282,559523..559918))
location: region:554860-559918:-1
so has part: feature:559523-559918:-1:exon
so has part: feature:556121-556282:-1:exon
so has part: feature:555845-556024:-1:exon
so has part: feature:555677-555770:-1:exon
so has part: feature:555415-555598:-1:exon
so has part: feature:554860-555312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559523-559918:-1:exon

position:559523:-1
position: 559523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556121-556282:-1:exon

position:556121:-1
position: 556121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556282:-1
position: 556282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555845-556024:-1:exon

position:555845:-1
position: 555845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556024:-1
position: 556024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555677-555770:-1:exon

position:555677:-1
position: 555677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555770:-1
position: 555770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:555415-555598:-1:exon

position:555415:-1
position: 555415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555598:-1
position: 555598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554860-555312:-1:exon

position:555312:-1
position: 555312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RDH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RDH8
product: retinol dehydrogenase 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040542495.1
SIO_010081: RDH8
subclass of: SO_0000673
so part of: RDH8
location: complement(join(554860..555312,555415..555598,555677..555770,555845..556024,556121..556282,556760..556893,559523..559918))
location: region:554860-559918:-1
so has part: feature:559523-559918:-1:exon
so has part: feature:556760-556893:-1:exon
so has part: feature:556121-556282:-1:exon
so has part: feature:555845-556024:-1:exon
so has part: feature:555677-555770:-1:exon
so has part: feature:555415-555598:-1:exon
so has part: feature:554860-555312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559523-559918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556760-556893:-1:exon

position:556760:-1
position: 556760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556893:-1
position: 556893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:556121-556282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555845-556024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555677-555770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555415-555598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554860-555312:-1:exon

RDH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RDH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 8 isoform X1
translation: MAGPAPRTVLVTGCSSGIGLAVAVRLAQDPQRRFQVIATMRDLRKKEKLEEAAGPALGKTLSIQRLDVCSDTSVAECLSSIPGGRVDVLVNNAGVGHVGPVESISVEEMKRVFETNFFGAVRMVKAVLPDMKRRRSGHIVVVSSVMGLQGIVFNDVYAASKFAVEGFCESLAVQLLQFNVFVSMVEPGPVNTDFELKLMEEVSRSEFPGADEATVRYFKDVYLPASHEIFTTLGQSPAAVAEAIASVIGAQRPAFRTQTNGLYTPLVALKYADPSGDLSVRTYHRLLFHYGTLFHLSMAALRCLTCGCFRRRIAPL
SIO_010081: RDH8
subclass of: SO_0000673
so part of: RDH8
location: complement(join(555088..555312,555415..555598,555677..555770,555845..556024,556121..556282,556760..556865))
location: region:555088-556865:-1
so has part: feature:556760-556865:-1:exon
so has part: feature:556121-556282:-1:exon
so has part: feature:555845-556024:-1:exon
so has part: feature:555677-555770:-1:exon
so has part: feature:555415-555598:-1:exon
so has part: feature:555088-555312:-1:exon

XP_040398429.1
type: Protein
SIO_000068: ncbiprotein

position:555088:-1
position: 555088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556865:-1
position: 556865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556760-556865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556121-556282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555845-556024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555677-555770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555415-555598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555088-555312:-1:exon

RDH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RDH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 8 isoform X2
translation: MRDLRKKEKLEEAAGPALGKTLSIQRLDVCSDTSVAECLSSIPGGRVDVLVNNAGVGHVGPVESISVEEMKRVFETNFFGAVRMVKAVLPDMKRRRSGHIVVVSSVMGLQGIVFNDVYAASKFAVEGFCESLAVQLLQFNVFVSMVEPGPVNTDFELKLMEEVSRSEFPGADEATVRYFKDVYLPASHEIFTTLGQSPAAVAEAIASVIGAQRPAFRTQTNGLYTPLVALKYADPSGDLSVRTYHRLLFHYGTLFHLSMAALRCLTCGCFRRRIAPL
SIO_010081: RDH8
subclass of: SO_0000673
so part of: RDH8
location: complement(join(555088..555312,555415..555598,555677..555770,555845..556024,556121..556271))
location: region:555088-556271:-1
so has part: feature:556121-556271:-1:exon
so has part: feature:555845-556024:-1:exon
so has part: feature:555677-555770:-1:exon
so has part: feature:555415-555598:-1:exon
so has part: feature:555088-555312:-1:exon

XP_040398430.1
type: Protein
SIO_000068: ncbiprotein

position:556271:-1
position: 556271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556121-556271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555845-556024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555677-555770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555415-555598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555088-555312:-1:exon

COL5A3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: COL5A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 558250..576870
location: region:558250-576870:1
so has part: feature:558250-576870:1:exon
subclass of: SO_0000010

121062477
type: Gene
SIO_000068: ncbigene

position:558250:1
position: 558250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576870:1
position: 576870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558250-576870:1:exon

COL5A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: COL5A3
product: collagen type V alpha 3 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040542498.1
SIO_010081: COL5A3
subclass of: SO_0000673
so part of: COL5A3
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type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:574413-574466:1:exon

position:574413:1
position: 574413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574466:1
position: 574466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:574711-574746:1:exon

position:574711:1
position: 574711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574746:1
position: 574746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:574876-574929:1:exon

position:574876:1
position: 574876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574929:1
position: 574929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:575046-575289:1:exon

position:575046:1
position: 575046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575289:1
position: 575289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:575393-575505:1:exon

position:575393:1
position: 575393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575505:1
position: 575505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:575648-575716:1:exon

position:575648:1
position: 575648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575716:1
position: 575716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:575815-576051:1:exon

position:575815:1
position: 575815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576051:1
position: 576051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:576178-576870:1:exon

position:576178:1
position: 576178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL5A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: COL5A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-3(V) chain
translation: MEPPPRPAALLALLALLPAATAAVPVDVLQTLGMKDGRDGVAVTAGICTQRPGTEDPDFAFRVDNRTQLSAPTRQLFPDSSFPVDFSILATVRARRGSQAFLLSIYDERGVQQLGVEVGRSPVFLYEDQDGHPAPERYPVFRKVNLADGRWHRVALAVEGTNVSLLVDCHLLATLPLERGPRPVVSTEGVTLFGARLLDEEVFEGDIQQLLIVPDPAAAHSYCQLYMPACDQPLLYPLLAPFPEESGPEPSAAPRRKGKKGKGKGKRKGKGKKRRNKELQEQHEASEPSAVANQASAPTPPPPSVEDSSPPPVTSSLATTVSVALNRTDPFEDAGEGLVLESGEDGAAGAASAELPGYEDYYDGDPASPERFGPAEREETVIRAPQEPSLKGDKGEPAVVEPDRRFEGPPGPPGPAGETGPLGPPGLPGLPGDPGEQGPAGRPGLPGADGIRGPAGTTIMLPFQFGGDSLKGPTVSFQEAQAQAILQQAKLAMKGPPGPMGLTGRPGPLGLPGHPGLKGDAGDMGPRGPRGLQGPPGPPGKLGRRGRAGADGARGLPGDTGPKGDRGFDGLPGLPGEKGHRGDVGKPGPAGTPGEKGARGSDGLPGPRGQPGEPGMRGLIGSRGSPGPPGPPGASGIDGAPGPKGNVGIQGEPGPPGQQGNPGPQGLPGPQGPVGLPGDKGPPGKPGIQGVAGADGPPGHPGREGPAGEKGLQGPVGAPGPVGYPGPRGVKGAFGVRGLKGSKGEKGEDGFPGFKGDMGPKGDRGDQGSLGPRGEDGPEGLKGQTGPVGEPGAAGPAGEKGKLGVPGLPGYPGRQGPKGSAGFPGPVGLAGEKGKRGKAGQAGQTGQRGPPGLPGERGLPGPTGTPGPKGDPGHDGAPGVVGEKGPQGPQGPHGFPGTKGPPGPAGKDGLPGHPGQRGEPGFHGKTGPPGPTGVVGPQGKLGETGPVGERGHPGPPGPPGEQGLPGAAGREGAKGDPGPAGVAGKSGPPGVHGFPGTRGAPGETGPPGLKGGEGPPGPPGPTGSPGERGPTGAAGGIGLPGRGGSKGPPGPLGEKGSPGERGPMGPAGHDGIQGPLGLPGPPGPPGPAGEDGDKGEMGLPGQKGSKGDKGEAGPPGPPGIQGPIGHPGPAGADGEPGRRGQQGMFGQKGDEGSRGHPGLSGPPRTAGKETPAPPGEKGENGDVGPMGPPGAPGPRGPQGPSGAEGPQGMPGGVGQPGAVGEKGEPGEAGDPGAPGEPGPPGVKGDVGEKGDAGPSGAAGPPGKKGPPGEDGAKGNLGPVGFPGDPGPPGDPGPPGLDGAVGEKGDGGDPGLPGPPGASGEPGPPGPPGRRGPVGPVGREGRQGEKGAKGQPGTEGPPGKTGPVGAQGPPGRPGSEGLRGIPGPAGEQGLLGAPGQAGPPGPLGPVGLPGLKGDPGHKGDKGHAGLIGLIGPPGEMGEKGDQGLPGVQGPPGPKGDPGLAGPTGPTGPPGPPGLSGPLGQKGSKGSPGALGPRGDTGPPGPPGPPGRPAELLEPLPSSRSGRHRRAAQGARGEQGTPPDYEGLEEVYASLSSLRTEVEQLRRPLGTPESPARVCKELQLCHPHLQDGEYWIDPNQGCSRDAFRVFCNFTAGGETCLFPDKKFEAVRLAAWNREKPGTWYSTFRRGKKFSYVDADGNPVPVPQLTFLRLLSASARQNFTLTCQHAAAWYDAHAASFARALRFRGANDEELGHDHPAAPVRALRDGCQERHGQERTVLEVSSSRVERLPLMDVAVADFGDANQKFGFELGPVCFVG
SIO_010081: COL5A3
subclass of: SO_0000673
so part of: COL5A3
location: join(558331..558397,559885..560052,560149..560362,560455..560617,561075..561197,561305..561451,562251..562364,562445..562606,562761..562808,562924..562965,563042..563104,563291..563365,563444..563527,563605..563661,563796..563849,563928..563981,564127..564180,564264..564317,564391..564444,564529..564573,564770..564823,564941..564985,565142..565195,565278..565322,565405..565458,565570..565614,565702..565755,565872..565916,566139..566192,566391..566498,566603..566656,566729..566782,566945..566989,568298..568351,568435..568479,568650..568703,568786..568839,568923..568976,569098..569205,569337..569426,569517..569570,569740..569847,569957..570064,570466..570519,570662..570715,570874..570996,571092..571136,571266..571319,571407..571460,571579..571632,571786..571893,572035..572088,572271..572324,572461..572514,572620..572673,572812..572919,573908..573961,574040..574093,574193..574300,574413..574466,574711..574746,574876..574929,575046..575289,575393..575505,575648..575716,575815..576051,576178..576324)
location: region:558331-576324:1
so has part: feature:558331-558397:1:exon
so has part: feature:559885-560052:1:exon
so has part: feature:560149-560362:1:exon
so has part: feature:560455-560617:1:exon
so has part: feature:561075-561197:1:exon
so has part: feature:561305-561451:1:exon
so has part: feature:562251-562364:1:exon
so has part: feature:562445-562606:1:exon
so has part: feature:562761-562808:1:exon
so has part: feature:562924-562965:1:exon
so has part: feature:563042-563104:1:exon
so has part: feature:563291-563365:1:exon
so has part: feature:563444-563527:1:exon
so has part: feature:563605-563661:1:exon
so has part: feature:563796-563849:1:exon
so has part: feature:563928-563981:1:exon
so has part: feature:564127-564180:1:exon
so has part: feature:564264-564317:1:exon
so has part: feature:564391-564444:1:exon
so has part: feature:564529-564573:1:exon
so has part: feature:564770-564823:1:exon
so has part: feature:564941-564985:1:exon
so has part: feature:565142-565195:1:exon
so has part: feature:565278-565322:1:exon
so has part: feature:565405-565458:1:exon
so has part: feature:565570-565614:1:exon
so has part: feature:565702-565755:1:exon
so has part: feature:565872-565916:1:exon
so has part: feature:566139-566192:1:exon
so has part: feature:566391-566498:1:exon
so has part: feature:566603-566656:1:exon
so has part: feature:566729-566782:1:exon
so has part: feature:566945-566989:1:exon
so has part: feature:568298-568351:1:exon
so has part: feature:568435-568479:1:exon
so has part: feature:568650-568703:1:exon
so has part: feature:568786-568839:1:exon
so has part: feature:568923-568976:1:exon
so has part: feature:569098-569205:1:exon
so has part: feature:569337-569426:1:exon
so has part: feature:569517-569570:1:exon
so has part: feature:569740-569847:1:exon
so has part: feature:569957-570064:1:exon
so has part: feature:570466-570519:1:exon
so has part: feature:570662-570715:1:exon
so has part: feature:570874-570996:1:exon
so has part: feature:571092-571136:1:exon
so has part: feature:571266-571319:1:exon
so has part: feature:571407-571460:1:exon
so has part: feature:571579-571632:1:exon
so has part: feature:571786-571893:1:exon
so has part: feature:572035-572088:1:exon
so has part: feature:572271-572324:1:exon
so has part: feature:572461-572514:1:exon
so has part: feature:572620-572673:1:exon
so has part: feature:572812-572919:1:exon
so has part: feature:573908-573961:1:exon
so has part: feature:574040-574093:1:exon
so has part: feature:574193-574300:1:exon
so has part: feature:574413-574466:1:exon
so has part: feature:574711-574746:1:exon
so has part: feature:574876-574929:1:exon
so has part: feature:575046-575289:1:exon
so has part: feature:575393-575505:1:exon
so has part: feature:575648-575716:1:exon
so has part: feature:575815-576051:1:exon

XP_040398432.1
type: Protein
SIO_000068: ncbiprotein

position:558331:1
position: 558331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576324:1
position: 576324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558331-558397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559885-560052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560149-560362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560455-560617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561075-561197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561305-561451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562251-562364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562445-562606:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:562761-562808:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:562924-562965:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:563042-563104:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:563291-563365:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:563444-563527:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:563605-563661:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:563796-563849:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:563928-563981:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:564127-564180:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:564264-564317:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:564391-564444:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:564529-564573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:564770-564823:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:564941-564985:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:565142-565195:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:565278-565322:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:565405-565458:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:565570-565614:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:565702-565755:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:565872-565916:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:566139-566192:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:566391-566498:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:566603-566656:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:566729-566782:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:566945-566989:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:568298-568351:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:568435-568479:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:568650-568703:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:568786-568839:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:568923-568976:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:569098-569205:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:569337-569426:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:569517-569570:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:569740-569847:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:569957-570064:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:570466-570519:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:570662-570715:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:570874-570996:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:571092-571136:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:571266-571319:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:571407-571460:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:571579-571632:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:571786-571893:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:572035-572088:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:572271-572324:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:572461-572514:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:572620-572673:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:572812-572919:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:573908-573961:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:574040-574093:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:574193-574300:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:574413-574466:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:574711-574746:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:574876-574929:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:575046-575289:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:575393-575505:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:575648-575716:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:575815-576051:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:576178-576324:1:exon

OLFM2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: OLFM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 577318..590278
location: region:577318-590278:1
so has part: feature:577318-590278:1:exon
subclass of: SO_0000010

121062498
type: Gene
SIO_000068: ncbigene

position:577318:1
position: 577318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590278:1
position: 590278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577318-590278:1:exon

OLFM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: OLFM2
product: olfactomedin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040542536.1
SIO_010081: OLFM2
subclass of: SO_0000673
so part of: OLFM2
location: join(577318..577554,585697..585846,586674..586829,588020..588242,588545..588651,589345..590278)
location: region:577318-590278:1
so has part: feature:577318-577554:1:exon
so has part: feature:585697-585846:1:exon
so has part: feature:586674-586829:1:exon
so has part: feature:588020-588242:1:exon
so has part: feature:588545-588651:1:exon
so has part: feature:589345-590278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577318-577554:1:exon

position:577554:1
position: 577554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585697-585846:1:exon

position:585697:1
position: 585697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585846:1
position: 585846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:586674-586829:1:exon

position:586674:1
position: 586674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586829:1
position: 586829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:588020-588242:1:exon

position:588020:1
position: 588020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588242:1
position: 588242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:588545-588651:1:exon

position:588545:1
position: 588545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588651:1
position: 588651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:589345-590278:1:exon

position:589345:1
position: 589345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OLFM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: OLFM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noelin-2 isoform X3
translation: MRLFAGLLLLLSAGSPAMQTLFQSPDEGWQVYTSAQAPDGKCLCTAVIPVQGSCSRDLRSHQLRQLTEKVQNISQSMEVLDLRTYRDLQYVRNTEALMKGLDSRLRVAAESQKSLNAKSFQQELKDKMTELLPLLPVLDQYKADTRLIVHLKEEVRNLSGSLLAIQEEMGAYDYEELQQRVLMLEARLHACMQKLGCGKLTGVSNPITIRASGSRFGSWMTDTMTPSADSRVWYMDGYYKGRRVLEFRTLNDFVTGQNFVQHLLPHPWAGTGHVVFNGSLYYNKYQSNVAVKYHFRSRSVLVQRSLAGAGYNNTFPYSWGGFSDIDFMVDESGLWAVYTTNQNAGNIVVSRVDPQTLEVLRSWDTGYPKRSAGESFIICGTLYVTNSHLAGAKIYFAYYTNTSSYEYTDIPFHNQYSHISMLDYNPRERVLYTWNNGHQVIYNVTLFHVIKTSGEL
SIO_010081: OLFM2
subclass of: SO_0000673
so part of: OLFM2
location: join(577498..577554,585697..585846,586674..586829,588020..588242,588545..588651,589345..590022)
location: region:577498-590022:1
so has part: feature:577498-577554:1:exon
so has part: feature:585697-585846:1:exon
so has part: feature:586674-586829:1:exon
so has part: feature:588020-588242:1:exon
so has part: feature:588545-588651:1:exon
so has part: feature:589345-590022:1:exon

XP_040398470.1
type: Protein
SIO_000068: ncbiprotein

position:577498:1
position: 577498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590022:1
position: 590022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577498-577554:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585697-585846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586674-586829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588020-588242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588545-588651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589345-590022:1:exon

OLFM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: OLFM2
product: olfactomedin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542534.1
SIO_010081: OLFM2
subclass of: SO_0000673
so part of: OLFM2
location: join(582028..582225,585697..585846,586674..586829,588020..588242,588545..588651,589345..590278)
location: region:582028-590278:1
so has part: feature:582028-582225:1:exon
so has part: feature:585697-585846:1:exon
so has part: feature:586674-586829:1:exon
so has part: feature:588020-588242:1:exon
so has part: feature:588545-588651:1:exon
so has part: feature:589345-590278:1:exon

position:582028:1
position: 582028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582028-582225:1:exon

position:582225:1
position: 582225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585697-585846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586674-586829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588020-588242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588545-588651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589345-590278:1:exon

OLFM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: OLFM2
product: olfactomedin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542535.1
SIO_010081: OLFM2
subclass of: SO_0000673
so part of: OLFM2
location: join(582031..582225,585697..585846,586674..586829,588023..588242,588545..588651,589345..590278)
location: region:582031-590278:1
so has part: feature:582031-582225:1:exon
so has part: feature:585697-585846:1:exon
so has part: feature:586674-586829:1:exon
so has part: feature:588023-588242:1:exon
so has part: feature:588545-588651:1:exon
so has part: feature:589345-590278:1:exon

position:582031:1
position: 582031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582031-582225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585697-585846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586674-586829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588023-588242:1:exon

position:588023:1
position: 588023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:588545-588651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589345-590278:1:exon

OLFM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: OLFM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noelin-2 isoform X1
translation: MTVPLLKIGAVLSTMAMVTNWMSQTLPSLVGLNGTAVSRAGTSEKITLFQSPDEGWQVYTSAQAPDGKCLCTAVIPVQGSCSRDLRSHQLRQLTEKVQNISQSMEVLDLRTYRDLQYVRNTEALMKGLDSRLRVAAESQKSLNAKSFQQELKDKMTELLPLLPVLDQYKADTRLIVHLKEEVRNLSGSLLAIQEEMGAYDYEELQQRVLMLEARLHACMQKLGCGKLTGVSNPITIRASGSRFGSWMTDTMTPSADSRVWYMDGYYKGRRVLEFRTLNDFVTGQNFVQHLLPHPWAGTGHVVFNGSLYYNKYQSNVAVKYHFRSRSVLVQRSLAGAGYNNTFPYSWGGFSDIDFMVDESGLWAVYTTNQNAGNIVVSRVDPQTLEVLRSWDTGYPKRSAGESFIICGTLYVTNSHLAGAKIYFAYYTNTSSYEYTDIPFHNQYSHISMLDYNPRERVLYTWNNGHQVIYNVTLFHVIKTSGEL
SIO_010081: OLFM2
subclass of: SO_0000673
so part of: OLFM2
location: join(582088..582225,585697..585846,586674..586829,588020..588242,588545..588651,589345..590022)
location: region:582088-590022:1
so has part: feature:582088-582225:1:exon
so has part: feature:585697-585846:1:exon
so has part: feature:586674-586829:1:exon
so has part: feature:588020-588242:1:exon
so has part: feature:588545-588651:1:exon
so has part: feature:589345-590022:1:exon

XP_040398468.1
type: Protein
SIO_000068: ncbiprotein

position:582088:1
position: 582088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582088-582225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585697-585846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586674-586829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588020-588242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588545-588651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589345-590022:1:exon

OLFM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: OLFM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noelin-2 isoform X2
translation: MTVPLLKIGAVLSTMAMVTNWMSQTLPSLVGLNGTAVSRAGTSEKITLFQSPDEGWQVYTSAQAPDGKCLCTAVIPVQGSCSRDLRSHQLRQLTEKVQNISQSMEVLDLRTYRDLQYVRNTEALMKGLDSRLRVAAESQKSLNAKSFQELKDKMTELLPLLPVLDQYKADTRLIVHLKEEVRNLSGSLLAIQEEMGAYDYEELQQRVLMLEARLHACMQKLGCGKLTGVSNPITIRASGSRFGSWMTDTMTPSADSRVWYMDGYYKGRRVLEFRTLNDFVTGQNFVQHLLPHPWAGTGHVVFNGSLYYNKYQSNVAVKYHFRSRSVLVQRSLAGAGYNNTFPYSWGGFSDIDFMVDESGLWAVYTTNQNAGNIVVSRVDPQTLEVLRSWDTGYPKRSAGESFIICGTLYVTNSHLAGAKIYFAYYTNTSSYEYTDIPFHNQYSHISMLDYNPRERVLYTWNNGHQVIYNVTLFHVIKTSGEL
SIO_010081: OLFM2
subclass of: SO_0000673
so part of: OLFM2
location: join(582088..582225,585697..585846,586674..586829,588023..588242,588545..588651,589345..590022)
location: region:582088-590022:1
so has part: feature:582088-582225:1:exon
so has part: feature:585697-585846:1:exon
so has part: feature:586674-586829:1:exon
so has part: feature:588023-588242:1:exon
so has part: feature:588545-588651:1:exon
so has part: feature:589345-590022:1:exon

XP_040398469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582088-582225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585697-585846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586674-586829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588023-588242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:588545-588651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589345-590022:1:exon

PIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(587322..623805)
location: region:587322-623805:-1
so has part: feature:587322-623805:-1:exon
subclass of: SO_0000010

121062503
type: Gene
SIO_000068: ncbigene

position:587322:-1
position: 587322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623805:-1
position: 623805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587322-623805:-1:exon

PIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PIN1
product: peptidylprolyl cis/trans isomerase, NIMA-interacting 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040542545.1
SIO_010081: PIN1
subclass of: SO_0000673
so part of: PIN1
location: complement(join(587322..587669,615812..615922,621907..622107,623654..623805))
location: region:587322-623805:-1
so has part: feature:623654-623805:-1:exon
so has part: feature:621907-622107:-1:exon
so has part: feature:615812-615922:-1:exon
so has part: feature:587322-587669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623654-623805:-1:exon

position:623654:-1
position: 623654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621907-622107:-1:exon

position:621907:-1
position: 621907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622107:-1
position: 622107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:615812-615922:-1:exon

position:615812:-1
position: 615812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615922:-1
position: 615922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:587322-587669:-1:exon

position:587669:-1
position: 587669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 isoform X1
translation: MGRARGGRKGPMRAGRRRRGKMAEEEKLPAGWEKRMSRSSGRVYYFNHITNASQWERPSGSGKNGQGEPSKVRCSHLLVKHNQSRRPSSWRQEKITRTKDEALELINGYIQKIKSGEEDFESLASQFSDCSSAKAGGDLGAFGRGQDHIPVRGPTPPAAIKPVSFAAAPVFNQCLVPATGRAPSLLQPDSVPRSSPSRGRNTP
SIO_010081: PIN1
subclass of: SO_0000673
so part of: PIN1
location: complement(join(587491..587669,615812..615922,621907..622107,623654..623774))
location: region:587491-623774:-1
so has part: feature:623654-623774:-1:exon
so has part: feature:621907-622107:-1:exon
so has part: feature:615812-615922:-1:exon
so has part: feature:587491-587669:-1:exon

XP_040398479.1
type: Protein
SIO_000068: ncbiprotein

position:587491:-1
position: 587491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623774:-1
position: 623774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623654-623774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621907-622107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615812-615922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587491-587669:-1:exon

LOC121062505
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 596972..598623
location: region:596972-598623:1
so has part: feature:596972-598623:1:exon
subclass of: SO_0000010

121062505
type: Gene
SIO_000068: ncbigene

position:596972:1
position: 596972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598623:1
position: 598623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596972-598623:1:exon

LOC121062505
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062505
product: microtubule-associated proteins 1A/1B light chain 3C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040542549.1
SIO_010081: LOC121062505
subclass of: SO_0000673
so part of: LOC121062505
location: join(596972..597074,597176..597231,597519..597625,598081..598623)
location: region:596972-598623:1
so has part: feature:596972-597074:1:exon
so has part: feature:597176-597231:1:exon
so has part: feature:597519-597625:1:exon
so has part: feature:598081-598623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:596972-597074:1:exon

position:597074:1
position: 597074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:597176-597231:1:exon

position:597176:1
position: 597176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597231:1
position: 597231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:597519-597625:1:exon

position:597519:1
position: 597519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597625:1
position: 597625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:598081-598623:1:exon

position:598081:1
position: 598081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121062505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated proteins 1A/1B light chain 3C-like
translation: MQQAESSTRPFKQRKSLATRMHEVTEIRIKYPNKIPVVVERYQKEKNLPPLSRTKFLVSQDLPLAQFAVTLRTRLCLASSQTLYLLVNNRGLPNMTVTMQELYRDNKDEDGFLYLTYASQEMFGGLLPRQTPSSPDLAFSLAVV
SIO_010081: LOC121062505
subclass of: SO_0000673
so part of: LOC121062505
location: join(597023..597074,597176..597231,597519..597625,598081..598300)
location: region:597023-598300:1
so has part: feature:597023-597074:1:exon
so has part: feature:597176-597231:1:exon
so has part: feature:597519-597625:1:exon
so has part: feature:598081-598300:1:exon

XP_040398483.1
type: Protein
SIO_000068: ncbiprotein

position:597023:1
position: 597023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598300:1
position: 598300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597023-597074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597176-597231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597519-597625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598081-598300:1:exon

PIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PIN1
product: peptidylprolyl cis/trans isomerase, NIMA-interacting 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040542546.1
SIO_010081: PIN1
subclass of: SO_0000673
so part of: PIN1
location: complement(join(611352..612635,615812..615922,621907..622107,623654..623805))
location: region:611352-623805:-1
so has part: feature:623654-623805:-1:exon
so has part: feature:621907-622107:-1:exon
so has part: feature:615812-615922:-1:exon
so has part: feature:611352-612635:-1:exon

position:611352:-1
position: 611352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623654-623805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621907-622107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615812-615922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611352-612635:-1:exon

position:612635:-1
position: 612635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 isoform X2
translation: MGRARGGRKGPMRAGRRRRGKMAEEEKLPAGWEKRMSRSSGRVYYFNHITNASQWERPSGSGKNGQGEPSKVRCSHLLVKHNQSRRPSSWRQEKITRTKDEALELINGYIQKIKSGEEDFESLASQFSDCSSAKAGGDLGAFGRGQMQKPFEDASFALRAGEMSGPVFTESGIHIILRTE
SIO_010081: PIN1
subclass of: SO_0000673
so part of: PIN1
location: complement(join(612526..612635,615812..615922,621907..622107,623654..623774))
location: region:612526-623774:-1
so has part: feature:623654-623774:-1:exon
so has part: feature:621907-622107:-1:exon
so has part: feature:615812-615922:-1:exon
so has part: feature:612526-612635:-1:exon

XP_040398480.1
type: Protein
SIO_000068: ncbiprotein

position:612526:-1
position: 612526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623654-623774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621907-622107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615812-615922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612526-612635:-1:exon

UBL5
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: UBL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(624061..626191)
location: region:624061-626191:-1
so has part: feature:624061-626191:-1:exon
subclass of: SO_0000010

121062507
type: Gene
SIO_000068: ncbigene

position:624061:-1
position: 624061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626191:-1
position: 626191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624061-626191:-1:exon

UBL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: UBL5
product: ubiquitin like 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542553.1
SIO_010081: UBL5
subclass of: SO_0000673
so part of: UBL5
location: complement(join(624061..624291,625014..625051,625164..625247,625697..625758,626127..626191))
location: region:624061-626191:-1
so has part: feature:626127-626191:-1:exon
so has part: feature:625697-625758:-1:exon
so has part: feature:625164-625247:-1:exon
so has part: feature:625014-625051:-1:exon
so has part: feature:624061-624291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626127-626191:-1:exon

position:626127:-1
position: 626127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625697-625758:-1:exon

position:625697:-1
position: 625697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625758:-1
position: 625758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:625164-625247:-1:exon

position:625164:-1
position: 625164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625247:-1
position: 625247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:625014-625051:-1:exon

position:625014:-1
position: 625014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625051:-1
position: 625051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:624061-624291:-1:exon

position:624291:-1
position: 624291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: UBL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like protein 5
translation: MIEVVCNDRLGKKVRVKCNTEDSIRDLKKLIAAQTGTRWDKIVLKKWYTIFKDHVTLGDYEIHDGMNLELYYQ
SIO_010081: UBL5
subclass of: SO_0000673
so part of: UBL5
location: complement(join(624248..624291,625014..625051,625164..625247,625697..625752))
location: region:624248-625752:-1
so has part: feature:625697-625752:-1:exon
so has part: feature:625164-625247:-1:exon
so has part: feature:625014-625051:-1:exon
so has part: feature:624248-624291:-1:exon

XP_040398487.1
type: Protein
SIO_000068: ncbiprotein

position:624248:-1
position: 624248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625752:-1
position: 625752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625697-625752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625164-625247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625014-625051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:624248-624291:-1:exon

FBXL12
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: FBXL12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 625697..628368
location: region:625697-628368:1
so has part: feature:625697-628368:1:exon
subclass of: SO_0000010

121062504
type: Gene
SIO_000068: ncbigene

position:625697:1
position: 625697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628368:1
position: 628368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625697-628368:1:exon

FBXL12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FBXL12
product: F-box and leucine rich repeat protein 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542548.1
SIO_010081: FBXL12
subclass of: SO_0000673
so part of: FBXL12
location: join(625697..625759,626159..626341,626545..626617,626708..628368)
location: region:625697-628368:1
so has part: feature:625697-625759:1:exon
so has part: feature:626159-626341:1:exon
so has part: feature:626545-626617:1:exon
so has part: feature:626708-628368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625697-625759:1:exon

position:625759:1
position: 625759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626159-626341:1:exon

position:626159:1
position: 626159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626341:1
position: 626341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626545-626617:1:exon

position:626545:1
position: 626545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626617:1
position: 626617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:626708-628368:1:exon

position:626708:1
position: 626708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXL12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FBXL12
product: F-box and leucine rich repeat protein 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040542547.1
SIO_010081: FBXL12
subclass of: SO_0000673
so part of: FBXL12
location: join(625703..625758,626121..626341,626545..626617,626708..628368)
location: region:625703-628368:1
so has part: feature:625703-625758:1:exon
so has part: feature:626121-626341:1:exon
so has part: feature:626545-626617:1:exon
so has part: feature:626708-628368:1:exon

position:625703:1
position: 625703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625703-625758:1:exon

position:625758:1
position: 625758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626121-626341:1:exon

position:626121:1
position: 626121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626545-626617:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626708-628368:1:exon

FBXL12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FBXL12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 12
translation: MAARKMAAKMAPKMAAEVPDSVLLRVLALLPLRDRLRAARVCRRWRQLVQDRVLWADVDLSPHKLSSKILWQLVRHRLGDSLRTLRVRGALLAGGRERLLTPALLAALAKRCPRLTRLCLAEADLRPLPYESFPDSITVLELSCCEIPAAWFCGSEAQALPRLQHLVVHKVPAFSNQHLLNISSRNRLKTLTLSGTYRVTDAGIQSAAPHLEELQRLVLRHCVVTDSALHFIGRHMKHLRFLEISSAYSLTNMGLACLAALKCLEMLHLDHCDKFSPDAIAALCRALPQLRNLKLDGADFGDEAMGKIQASLPNCSFSHTL
SIO_010081: FBXL12
subclass of: SO_0000673
so part of: FBXL12
location: join(626223..626341,626545..626617,626708..627481)
location: region:626223-627481:1
so has part: feature:626223-626341:1:exon
so has part: feature:626545-626617:1:exon
so has part: feature:626708-627481:1:exon

XP_040398481.1
type: Protein
SIO_000068: ncbiprotein

position:626223:1
position: 626223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627481:1
position: 627481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626223-626341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626545-626617:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626708-627481:1:exon

FBXL12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FBXL12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 12
translation: MAARKMAAKMAPKMAAEVPDSVLLRVLALLPLRDRLRAARVCRRWRQLVQDRVLWADVDLSPHKLSSKILWQLVRHRLGDSLRTLRVRGALLAGGRERLLTPALLAALAKRCPRLTRLCLAEADLRPLPYESFPDSITVLELSCCEIPAAWFCGSEAQALPRLQHLVVHKVPAFSNQHLLNISSRNRLKTLTLSGTYRVTDAGIQSAAPHLEELQRLVLRHCVVTDSALHFIGRHMKHLRFLEISSAYSLTNMGLACLAALKCLEMLHLDHCDKFSPDAIAALCRALPQLRNLKLDGADFGDEAMGKIQASLPNCSFSHTL
SIO_010081: FBXL12
subclass of: SO_0000673
so part of: FBXL12
location: join(626223..626341,626545..626617,626708..627481)
location: region:626223-627481:1
so has part: feature:626223-626341:1:exon
so has part: feature:626545-626617:1:exon
so has part: feature:626708-627481:1:exon

XP_040398482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:626223-626341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626545-626617:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626708-627481:1:exon

LOC121062463
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 630293..633063
location: region:630293-633063:1
so has part: feature:630293-633063:1:exon
subclass of: SO_0000010

121062463
type: Gene
SIO_000068: ncbigene

position:630293:1
position: 630293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633063:1
position: 633063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630293-633063:1:exon

LOC121062463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062463
product: hepatic lectin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040542465.1
SIO_010081: LOC121062463
subclass of: SO_0000673
so part of: LOC121062463
location: join(630293..630335,631147..631293,631555..631629,631928..632079,632400..632512,632720..633063)
location: region:630293-633063:1
so has part: feature:630293-630335:1:exon
so has part: feature:631147-631293:1:exon
so has part: feature:631555-631629:1:exon
so has part: feature:631928-632079:1:exon
so has part: feature:632400-632512:1:exon
so has part: feature:632720-633063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630293-630335:1:exon

position:630335:1
position: 630335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631147-631293:1:exon

position:631147:1
position: 631147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631293:1
position: 631293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631555-631629:1:exon

position:631555:1
position: 631555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631629:1
position: 631629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:631928-632079:1:exon

position:631928:1
position: 631928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632079:1
position: 632079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:632400-632512:1:exon

position:632400:1
position: 632400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632512:1
position: 632512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:632720-633063:1:exon

position:632720:1
position: 632720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121062463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatic lectin-like
translation: MDEEHLHDDLHIFKGEPFFTSLVFYFKDRSFFQQKLRSFLTIYLLLALSFLLMITLFAVSLSRVSAVSSKLNEVHTEKKLNFSNRDSLLFPCGPEAREWEYFDGKCYYFSIDRMSWYKAKTQCEEMHSRLAIINSFAKQNFVMFRTRNERFWIGLTDGNSEGEWEWIDGTDYKSTFTFWKEGEPNNSGNNEDCAHVWTSGQWNDVYCTFECYYLCEKPVPN
SIO_010081: LOC121062463
subclass of: SO_0000673
so part of: LOC121062463
location: join(630293..630335,631147..631293,631555..631629,631928..632079,632400..632512,632720..632855)
location: region:630293-632855:1
so has part: feature:630293-630335:1:exon
so has part: feature:631147-631293:1:exon
so has part: feature:631555-631629:1:exon
so has part: feature:631928-632079:1:exon
so has part: feature:632400-632512:1:exon
so has part: feature:632720-632855:1:exon

XP_040398399.1
type: Protein
SIO_000068: ncbiprotein

position:632855:1
position: 632855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630293-630335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631147-631293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631555-631629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631928-632079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632400-632512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632720-632855:1:exon

LOC121062500
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 633968..656973
location: region:633968-656973:1
so has part: feature:633968-656973:1:exon
subclass of: SO_0000010

121062500
type: Gene
SIO_000068: ncbigene

position:633968:1
position: 633968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656973:1
position: 656973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633968-656973:1:exon

LOC121062500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062500
product: LIM homeobox transcription factor 1-alpha-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040542538.1
SIO_010081: LOC121062500
subclass of: SO_0000673
so part of: LOC121062500
location: join(633968..634109,634609..634674,637793..637979,652382..652614,653122..653279,653373..653450,654114..654246,654664..654822,655190..656973)
location: region:633968-656973:1
so has part: feature:633968-634109:1:exon
so has part: feature:634609-634674:1:exon
so has part: feature:637793-637979:1:exon
so has part: feature:652382-652614:1:exon
so has part: feature:653122-653279:1:exon
so has part: feature:653373-653450:1:exon
so has part: feature:654114-654246:1:exon
so has part: feature:654664-654822:1:exon
so has part: feature:655190-656973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633968-634109:1:exon

position:634109:1
position: 634109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634609-634674:1:exon

position:634609:1
position: 634609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634674:1
position: 634674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637793-637979:1:exon

position:637793:1
position: 637793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637979:1
position: 637979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:652382-652614:1:exon

position:652382:1
position: 652382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652614:1
position: 652614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:653122-653279:1:exon

position:653122:1
position: 653122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653279:1
position: 653279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:653373-653450:1:exon

position:653373:1
position: 653373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653450:1
position: 653450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:654114-654246:1:exon

position:654114:1
position: 654114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654246:1
position: 654246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:654664-654822:1:exon

position:654664:1
position: 654664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654822:1
position: 654822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:655190-656973:1:exon

position:655190:1
position: 655190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121062500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062500
product: LIM homeobox transcription factor 1-alpha-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040542539.1
SIO_010081: LOC121062500
subclass of: SO_0000673
so part of: LOC121062500
location: join(634589..634674,637793..637979,652382..652614,653122..653279,653373..653450,654114..654246,654664..654822,655190..656973)
location: region:634589-656973:1
so has part: feature:634589-634674:1:exon
so has part: feature:637793-637979:1:exon
so has part: feature:652382-652614:1:exon
so has part: feature:653122-653279:1:exon
so has part: feature:653373-653450:1:exon
so has part: feature:654114-654246:1:exon
so has part: feature:654664-654822:1:exon
so has part: feature:655190-656973:1:exon

position:634589:1
position: 634589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634589-634674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637793-637979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652382-652614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653122-653279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653373-653450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654114-654246:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654664-654822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655190-656973:1:exon

LOC121062500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM homeobox transcription factor 1-alpha-like
translation: MKTEEAPSCLQQATPVLGFGSDPKMREVCAGCDTPISDRFLLRVNERSWHEGCVKCAVCLQPLSGTCYCRNRQLYCKHDYEKLFQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSDYEKEKEMLSAISPAPTESVKSEDEDGSHSHGKGGEESKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQDQLGNPRLGSGRGTGRNSRQSNDDSEDGASVHGLDGLMVPYPRIPQQQLLPLDQNGYSTDLYRQGLTPPQLPGDHLHPYDSEGVFHDMDSDSISHLGDCLLSTAEANLLQARVGNPIDRLYSMQSSYFTS
SIO_010081: LOC121062500
subclass of: SO_0000673
so part of: LOC121062500
location: join(634617..634674,637793..637979,652382..652614,653122..653279,653373..653450,654114..654246,654664..654822,655190..655344)
location: region:634617-655344:1
so has part: feature:634617-634674:1:exon
so has part: feature:637793-637979:1:exon
so has part: feature:652382-652614:1:exon
so has part: feature:653122-653279:1:exon
so has part: feature:653373-653450:1:exon
so has part: feature:654114-654246:1:exon
so has part: feature:654664-654822:1:exon
so has part: feature:655190-655344:1:exon

XP_040398472.1
type: Protein
SIO_000068: ncbiprotein

position:634617:1
position: 634617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655344:1
position: 655344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634617-634674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637793-637979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652382-652614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653122-653279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653373-653450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654114-654246:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654664-654822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655190-655344:1:exon

LOC121062500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM homeobox transcription factor 1-alpha-like
translation: MKTEEAPSCLQQATPVLGFGSDPKMREVCAGCDTPISDRFLLRVNERSWHEGCVKCAVCLQPLSGTCYCRNRQLYCKHDYEKLFQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSDYEKEKEMLSAISPAPTESVKSEDEDGSHSHGKGGEESKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQDQLGNPRLGSGRGTGRNSRQSNDDSEDGASVHGLDGLMVPYPRIPQQQLLPLDQNGYSTDLYRQGLTPPQLPGDHLHPYDSEGVFHDMDSDSISHLGDCLLSTAEANLLQARVGNPIDRLYSMQSSYFTS
SIO_010081: LOC121062500
subclass of: SO_0000673
so part of: LOC121062500
location: join(634617..634674,637793..637979,652382..652614,653122..653279,653373..653450,654114..654246,654664..654822,655190..655344)
location: region:634617-655344:1
so has part: feature:634617-634674:1:exon
so has part: feature:637793-637979:1:exon
so has part: feature:652382-652614:1:exon
so has part: feature:653122-653279:1:exon
so has part: feature:653373-653450:1:exon
so has part: feature:654114-654246:1:exon
so has part: feature:654664-654822:1:exon
so has part: feature:655190-655344:1:exon

XP_040398473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634617-634674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637793-637979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652382-652614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653122-653279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653373-653450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654114-654246:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654664-654822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655190-655344:1:exon

CHCHD5
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CHCHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(662549..664533)
location: region:662549-664533:-1
so has part: feature:662549-664533:-1:exon
subclass of: SO_0000010

121062506
type: Gene
SIO_000068: ncbigene

position:662549:-1
position: 662549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664533:-1
position: 664533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662549-664533:-1:exon

CHCHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHCHD5
product: coiled-coil-helix-coiled-coil-helix domain containing 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040542552.1
SIO_010081: CHCHD5
subclass of: SO_0000673
so part of: CHCHD5
location: complement(join(662549..663003,663890..663975,664186..664326,664394..664533))
location: region:662549-664533:-1
so has part: feature:664394-664533:-1:exon
so has part: feature:664186-664326:-1:exon
so has part: feature:663890-663975:-1:exon
so has part: feature:662549-663003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664394-664533:-1:exon

position:664394:-1
position: 664394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664186-664326:-1:exon

position:664186:-1
position: 664186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664326:-1
position: 664326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:663890-663975:-1:exon

position:663890:-1
position: 663890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663975:-1
position: 663975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:662549-663003:-1:exon

position:663003:-1
position: 663003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHCHD5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: CHCHD5
product: coiled-coil-helix-coiled-coil-helix domain containing 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005815576.1
SIO_010081: CHCHD5
so part of: CHCHD5
location: complement(join(662549..662626,662744..663003,663824..663975,664186..664326,664394..664531))
location: region:662549-664531:-1
so has part: feature:664394-664531:-1:exon
so has part: feature:664186-664326:-1:exon
so has part: feature:663824-663975:-1:exon
so has part: feature:662744-663003:-1:exon
so has part: feature:662549-662626:-1:exon

position:664531:-1
position: 664531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664394-664531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664186-664326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663824-663975:-1:exon

position:663824:-1
position: 663824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:662744-663003:-1:exon

position:662744:-1
position: 662744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:662549-662626:-1:exon

position:662626:-1
position: 662626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHCHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHCHD5
product: coiled-coil-helix-coiled-coil-helix domain containing 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040542551.1
SIO_010081: CHCHD5
subclass of: SO_0000673
so part of: CHCHD5
location: complement(join(662549..663003,663824..663975,664186..664326,664394..664531))
location: region:662549-664531:-1
so has part: feature:664394-664531:-1:exon
so has part: feature:664186-664326:-1:exon
so has part: feature:663824-663975:-1:exon
so has part: feature:662549-663003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664394-664531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664186-664326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663824-663975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662549-663003:-1:exon

CHCHD5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: CHCHD5
product: coiled-coil-helix-coiled-coil-helix domain containing 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005815577.1
SIO_010081: CHCHD5
so part of: CHCHD5
location: complement(join(662549..662626,662744..663003,663087..663642,663824..663975,664186..664326,664394..664529))
location: region:662549-664529:-1
so has part: feature:664394-664529:-1:exon
so has part: feature:664186-664326:-1:exon
so has part: feature:663824-663975:-1:exon
so has part: feature:663087-663642:-1:exon
so has part: feature:662744-663003:-1:exon
so has part: feature:662549-662626:-1:exon

position:664529:-1
position: 664529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664394-664529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664186-664326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663824-663975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663087-663642:-1:exon

position:663087:-1
position: 663087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663642:-1
position: 663642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:662744-663003:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662549-662626:-1:exon

CHCHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHCHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil-helix-coiled-coil-helix domain-containing protein 5 isoform X2
translation: MEAALEVTARYCRSELEQYGRCVAASPASWQRDCHSLRLGISRCASAHPIVRRIRSDCAEPFAAFERCLQENEAAVGDPWN
SIO_010081: CHCHD5
subclass of: SO_0000673
so part of: CHCHD5
location: complement(join(662987..663003,663890..663975,664186..664326,664394..664395))
location: region:662987-664395:-1
so has part: feature:664394-664395:-1:exon
so has part: feature:664186-664326:-1:exon
so has part: feature:663890-663975:-1:exon
so has part: feature:662987-663003:-1:exon

XP_040398486.1
type: Protein
SIO_000068: ncbiprotein

position:662987:-1
position: 662987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664395:-1
position: 664395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664394-664395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664186-664326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663890-663975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662987-663003:-1:exon

CHCHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHCHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil-helix-coiled-coil-helix domain-containing protein 5 isoform X1
translation: MEAALEVTARYCRSELEQYGRCVAASPASWQRDCHSLRLGISRCASAHPIVRRIRSDCAEPFAAFERCLQENEAAVGKCSEHVAAFLRCAEQVKVAA
SIO_010081: CHCHD5
subclass of: SO_0000673
so part of: CHCHD5
location: complement(join(663825..663975,664186..664326,664394..664395))
location: region:663825-664395:-1
so has part: feature:664394-664395:-1:exon
so has part: feature:664186-664326:-1:exon
so has part: feature:663825-663975:-1:exon

XP_040398485.1
type: Protein
SIO_000068: ncbiprotein

position:663825:-1
position: 663825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664394-664395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664186-664326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663825-663975:-1:exon

ATP13A1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ATP13A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 664603..679401
location: region:664603-679401:1
so has part: feature:664603-679401:1:exon
subclass of: SO_0000010

121062497
type: Gene
SIO_000068: ncbigene

position:664603:1
position: 664603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679401:1
position: 679401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664603-679401:1:exon

ATP13A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ATP13A1
product: ATPase 13A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040542532.1
SIO_010081: ATP13A1
subclass of: SO_0000673
so part of: ATP13A1
location: join(664603..664952,665493..665582,665886..666076,666433..666505,666801..666956,667364..667433,668061..668167,668793..668922,669190..669245,669879..670005,670278..670415,670913..671033,671650..671807,672573..672748,673038..673148,673675..673800,674131..674239,674826..675025,675390..675486,675885..676066,676386..676500,676787..676983,677421..677563,678153..678264,678509..678652,679002..679401)
location: region:664603-679401:1
so has part: feature:664603-664952:1:exon
so has part: feature:665493-665582:1:exon
so has part: feature:665886-666076:1:exon
so has part: feature:666433-666505:1:exon
so has part: feature:666801-666956:1:exon
so has part: feature:667364-667433:1:exon
so has part: feature:668061-668167:1:exon
so has part: feature:668793-668922:1:exon
so has part: feature:669190-669245:1:exon
so has part: feature:669879-670005:1:exon
so has part: feature:670278-670415:1:exon
so has part: feature:670913-671033:1:exon
so has part: feature:671650-671807:1:exon
so has part: feature:672573-672748:1:exon
so has part: feature:673038-673148:1:exon
so has part: feature:673675-673800:1:exon
so has part: feature:674131-674239:1:exon
so has part: feature:674826-675025:1:exon
so has part: feature:675390-675486:1:exon
so has part: feature:675885-676066:1:exon
so has part: feature:676386-676500:1:exon
so has part: feature:676787-676983:1:exon
so has part: feature:677421-677563:1:exon
so has part: feature:678153-678264:1:exon
so has part: feature:678509-678652:1:exon
so has part: feature:679002-679401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664603-664952:1:exon

position:664952:1
position: 664952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665493-665582:1:exon

position:665493:1
position: 665493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665582:1
position: 665582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665886-666076:1:exon

position:665886:1
position: 665886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666076:1
position: 666076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:666433-666505:1:exon

position:666433:1
position: 666433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666505:1
position: 666505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666801-666956:1:exon

position:666801:1
position: 666801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666956:1
position: 666956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:667364-667433:1:exon

position:667364:1
position: 667364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667433:1
position: 667433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:668061-668167:1:exon

position:668061:1
position: 668061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668167:1
position: 668167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:668793-668922:1:exon

position:668793:1
position: 668793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668922:1
position: 668922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:669190-669245:1:exon

position:669190:1
position: 669190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669245:1
position: 669245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:669879-670005:1:exon

position:669879:1
position: 669879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670005:1
position: 670005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:670278-670415:1:exon

position:670278:1
position: 670278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670415:1
position: 670415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:670913-671033:1:exon

position:670913:1
position: 670913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671033:1
position: 671033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:671650-671807:1:exon

position:671650:1
position: 671650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671807:1
position: 671807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:672573-672748:1:exon

position:672573:1
position: 672573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672748:1
position: 672748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:673038-673148:1:exon

position:673038:1
position: 673038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673148:1
position: 673148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:673675-673800:1:exon

position:673675:1
position: 673675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673800:1
position: 673800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:674131-674239:1:exon

position:674131:1
position: 674131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674239:1
position: 674239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:674826-675025:1:exon

position:674826:1
position: 674826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675025:1
position: 675025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:675390-675486:1:exon

position:675390:1
position: 675390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675486:1
position: 675486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:675885-676066:1:exon

position:675885:1
position: 675885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676066:1
position: 676066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:676386-676500:1:exon

position:676386:1
position: 676386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676500:1
position: 676500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:676787-676983:1:exon

position:676787:1
position: 676787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676983:1
position: 676983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:677421-677563:1:exon

position:677421:1
position: 677421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677563:1
position: 677563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:678153-678264:1:exon

position:678153:1
position: 678153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678264:1
position: 678264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:678509-678652:1:exon

position:678509:1
position: 678509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678652:1
position: 678652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:679002-679401:1:exon

position:679002:1
position: 679002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP13A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ATP13A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum transmembrane helix translocase
translation: MAAAGPAAGPADELVSSVTLYRRRPRLLHGTVLPFVAGLYPAWLWLWGPRVWAAWGEEAAEQREGPAAPEAALLALAAIGVVHLLTALSGLWSVHAHCALTCVREPSPKKATLAKVVPTPNNGSVELVPLHRDQDEDGQEALSFEFQKIKYSYEINGKKQFLPVAFPVEHPLCYYQNARGYQEDKEIRAAEKKYGTNKAEMVVPEFLELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPYMIQVYRNRKWRPISSDEIIPGDIVSIGRSPHENLVPCDVLLLRGRCIVDEAMLTGESVPQMKEPVEDLSPEHILDMQTDARLHIIFGGTKVVQHIPPQKASTGLKPVDNGCVAYALRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFAIAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYVYCTEPFRIPFAGKVEVCCFDKTGTLTSDHLVVRGVAGLRDGKEVTPVSDIPVETHRAIATCHSLVQLDDGTLVGDPLEKAMLMAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSVLASYEKIGSTDLCYIAAVKGAPETLHKMLSQCPSNYHAVHTEISHEGARVLALGYKELGHLTHQQVREMKREALECDLRFAGFIVVSCPLKADSKSVIREIQNASHHVVMITGDSPLTACHVARELHFLQREHTLVLQPPVSKDSSWQWQSIDGAVVLPILPSSLRELTQQYDLCVTGEGLSHLQSVNRQQLLKLIPHVQVFARVVPKQKEFVITTLKSLGYVTLMCGDGTNDVGALKHADVGVALLANAPERLPERKKRPRDGPSDGRPALLSMGSGTVKPTSRGAKHRVMSQREEQLAIQRERISQVLKDLEEERVPVVKLGDASIAAPFTSKLSSIQCICHVIKQGRCTLVTTLQMFKILALNALILAYSQSVLYLEGVKFSDFQATLQGLLLAGCFLFISRSKPLKTLSKERPLPNIFNLYTVLTVLLQFLVHFLSLIYLYRGAQVRSDSKREEFVDLYKEFEPSLVNSTVYIMSMAMQMATFAINYKGHPFMESLQENKPLLWSIILSGLAIVGLLTGSSPEFNEQFGLVEIPTEFKIVITEVLLADFFLALLVDRILQFLLGSAKLKVPS
SIO_010081: ATP13A1
subclass of: SO_0000673
so part of: ATP13A1
location: join(664641..664952,665493..665582,665886..666076,666433..666505,666801..666956,667364..667433,668061..668167,668793..668922,669190..669245,669879..670005,670278..670415,670913..671033,671650..671807,672573..672748,673038..673148,673675..673800,674131..674239,674826..675025,675390..675486,675885..676066,676386..676500,676787..676983,677421..677563,678153..678264,678509..678652,679002..679112)
location: region:664641-679112:1
so has part: feature:664641-664952:1:exon
so has part: feature:665493-665582:1:exon
so has part: feature:665886-666076:1:exon
so has part: feature:666433-666505:1:exon
so has part: feature:666801-666956:1:exon
so has part: feature:667364-667433:1:exon
so has part: feature:668061-668167:1:exon
so has part: feature:668793-668922:1:exon
so has part: feature:669190-669245:1:exon
so has part: feature:669879-670005:1:exon
so has part: feature:670278-670415:1:exon
so has part: feature:670913-671033:1:exon
so has part: feature:671650-671807:1:exon
so has part: feature:672573-672748:1:exon
so has part: feature:673038-673148:1:exon
so has part: feature:673675-673800:1:exon
so has part: feature:674131-674239:1:exon
so has part: feature:674826-675025:1:exon
so has part: feature:675390-675486:1:exon
so has part: feature:675885-676066:1:exon
so has part: feature:676386-676500:1:exon
so has part: feature:676787-676983:1:exon
so has part: feature:677421-677563:1:exon
so has part: feature:678153-678264:1:exon
so has part: feature:678509-678652:1:exon
so has part: feature:679002-679112:1:exon

XP_040398466.1
type: Protein
SIO_000068: ncbiprotein

position:664641:1
position: 664641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679112:1
position: 679112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664641-664952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665493-665582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665886-666076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666433-666505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666801-666956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667364-667433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668061-668167:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668793-668922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:669190-669245:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669879-670005:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670278-670415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670913-671033:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671650-671807:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:672573-672748:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:673038-673148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:673675-673800:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:674131-674239:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:674826-675025:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:675390-675486:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:675885-676066:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:676386-676500:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:676787-676983:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:677421-677563:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:678153-678264:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:678509-678652:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:679002-679112:1:exon

MVB12A
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MVB12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(679666..682141)
location: region:679666-682141:-1
so has part: feature:679666-682141:-1:exon
subclass of: SO_0000010

121062502
type: Gene
SIO_000068: ncbigene

position:679666:-1
position: 679666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682141:-1
position: 682141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679666-682141:-1:exon

MVB12A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MVB12A
product: multivesicular body subunit 12A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542544.1
SIO_010081: MVB12A
subclass of: SO_0000673
so part of: MVB12A
location: complement(join(679666..679905,680011..680061,680149..680213,680570..680667,681059..681185,681268..681364,681820..681912,681993..682141))
location: region:679666-682141:-1
so has part: feature:681993-682141:-1:exon
so has part: feature:681820-681912:-1:exon
so has part: feature:681268-681364:-1:exon
so has part: feature:681059-681185:-1:exon
so has part: feature:680570-680667:-1:exon
so has part: feature:680149-680213:-1:exon
so has part: feature:680011-680061:-1:exon
so has part: feature:679666-679905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:681993-682141:-1:exon

position:681993:-1
position: 681993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:681820-681912:-1:exon

position:681820:-1
position: 681820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681912:-1
position: 681912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681268-681364:-1:exon

position:681268:-1
position: 681268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681364:-1
position: 681364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:681059-681185:-1:exon

position:681059:-1
position: 681059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681185:-1
position: 681185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:680570-680667:-1:exon

position:680570:-1
position: 680570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680667:-1
position: 680667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:680149-680213:-1:exon

position:680149:-1
position: 680149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680213:-1
position: 680213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:680011-680061:-1:exon

position:680011:-1
position: 680011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680061:-1
position: 680061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:679666-679905:-1:exon

position:679905:-1
position: 679905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MVB12A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MVB12A
product: multivesicular body subunit 12A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040542543.1
SIO_010081: MVB12A
subclass of: SO_0000673
so part of: MVB12A
location: complement(join(679666..679905,680011..680061,680149..680213,680570..680667,680824..680961,681059..681185,681268..681364,681820..681912,681993..682140))
location: region:679666-682140:-1
so has part: feature:681993-682140:-1:exon
so has part: feature:681820-681912:-1:exon
so has part: feature:681268-681364:-1:exon
so has part: feature:681059-681185:-1:exon
so has part: feature:680824-680961:-1:exon
so has part: feature:680570-680667:-1:exon
so has part: feature:680149-680213:-1:exon
so has part: feature:680011-680061:-1:exon
so has part: feature:679666-679905:-1:exon

position:682140:-1
position: 682140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681993-682140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681820-681912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:681268-681364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681059-681185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680824-680961:-1:exon

position:680824:-1
position: 680824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680961:-1
position: 680961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:680570-680667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680149-680213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680011-680061:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679666-679905:-1:exon

MVB12A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MVB12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12A isoform X2
translation: MAAAAAEEPPAPLSGVGWAATPEAAPAGWSVLTTSVEGAAANLGKGFGHKGGGYLCVSTGGQAATGPVVTDVQVLSERNPQPTGYSRVPEFPEPRAGVSRKKRVYVRLQPLSAADTAVFDIKLSSKSKAIPHYMKIGAPERPLARSGTKRASFTLPNSVDDGSGIYNLSAMDGVPFTLHPKFESSLSFGSNALLAELNVKSLADIEKEYNYAFVVERTAAARLPPSIC
SIO_010081: MVB12A
subclass of: SO_0000673
so part of: MVB12A
location: complement(join(679843..679905,680011..680061,680149..680213,680570..680667,681059..681185,681268..681364,681820..681912,681993..682085))
location: region:679843-682085:-1
so has part: feature:681993-682085:-1:exon
so has part: feature:681820-681912:-1:exon
so has part: feature:681268-681364:-1:exon
so has part: feature:681059-681185:-1:exon
so has part: feature:680570-680667:-1:exon
so has part: feature:680149-680213:-1:exon
so has part: feature:680011-680061:-1:exon
so has part: feature:679843-679905:-1:exon

XP_040398478.1
type: Protein
SIO_000068: ncbiprotein

position:679843:-1
position: 679843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682085:-1
position: 682085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681993-682085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681820-681912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:681268-681364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681059-681185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680570-680667:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:680149-680213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680011-680061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679843-679905:-1:exon

MVB12A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MVB12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12A isoform X1
translation: MAAAAAEEPPAPLSGVGWAATPEAAPAGWSVLTTSVEGAAANLGKGFGHKGGGYLCVSTGGQAATGPVVTDVQVLSERNPQPTGYSRVPEFPEPRAGVSRKKRVYVRLQPLSAADTAVFDIKLSSKSKAIPHYMKIGELGGFAVWCKKGPVPKSSLAPVPSPRTVSLGLKQLSLQPAADSEQKAPERPLARSGTKRASFTLPNSVDDGSGIYNLSAMDGVPFTLHPKFESSLSFGSNALLAELNVKSLADIEKEYNYAFVVERTAAARLPPSIC
SIO_010081: MVB12A
subclass of: SO_0000673
so part of: MVB12A
location: complement(join(679843..679905,680011..680061,680149..680213,680570..680667,680824..680961,681059..681185,681268..681364,681820..681912,681993..682085))
location: region:679843-682085:-1
so has part: feature:681993-682085:-1:exon
so has part: feature:681820-681912:-1:exon
so has part: feature:681268-681364:-1:exon
so has part: feature:681059-681185:-1:exon
so has part: feature:680824-680961:-1:exon
so has part: feature:680570-680667:-1:exon
so has part: feature:680149-680213:-1:exon
so has part: feature:680011-680061:-1:exon
so has part: feature:679843-679905:-1:exon

XP_040398477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:681993-682085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681820-681912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:681268-681364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681059-681185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680824-680961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:680570-680667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680149-680213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680011-680061:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679843-679905:-1:exon

DSN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DSN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(682239..699608)
location: region:682239-699608:-1
so has part: feature:682239-699608:-1:exon
subclass of: SO_0000010

121062501
type: Gene
SIO_000068: ncbigene

position:682239:-1
position: 682239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699608:-1
position: 699608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682239-699608:-1:exon

DSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DSN1
product: DSN1 component of MIS12 kinetochore complex, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040542541.1
SIO_010081: DSN1
subclass of: SO_0000673
so part of: DSN1
location: complement(join(682239..682393,682492..682579,682648..682795,682915..682986,683167..683226,683558..683645,684032..684104,684387..684460,684875..685132,685323..685368,685461..685497,699604..699608))
location: region:682239-699608:-1
so has part: feature:699604-699608:-1:exon
so has part: feature:685461-685497:-1:exon
so has part: feature:685323-685368:-1:exon
so has part: feature:684875-685132:-1:exon
so has part: feature:684387-684460:-1:exon
so has part: feature:684032-684104:-1:exon
so has part: feature:683558-683645:-1:exon
so has part: feature:683167-683226:-1:exon
so has part: feature:682915-682986:-1:exon
so has part: feature:682648-682795:-1:exon
so has part: feature:682492-682579:-1:exon
so has part: feature:682239-682393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699604-699608:-1:exon

position:699604:-1
position: 699604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685461-685497:-1:exon

position:685461:-1
position: 685461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685497:-1
position: 685497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685323-685368:-1:exon

position:685323:-1
position: 685323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685368:-1
position: 685368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:684875-685132:-1:exon

position:684875:-1
position: 684875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685132:-1
position: 685132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:684387-684460:-1:exon

position:684387:-1
position: 684387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684460:-1
position: 684460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:684032-684104:-1:exon

position:684032:-1
position: 684032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684104:-1
position: 684104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:683558-683645:-1:exon

position:683558:-1
position: 683558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683645:-1
position: 683645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:683167-683226:-1:exon

position:683167:-1
position: 683167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683226:-1
position: 683226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:682915-682986:-1:exon

position:682915:-1
position: 682915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682986:-1
position: 682986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:682648-682795:-1:exon

position:682648:-1
position: 682648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682795:-1
position: 682795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:682492-682579:-1:exon

position:682492:-1
position: 682492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682579:-1
position: 682579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:682239-682393:-1:exon

position:682393:-1
position: 682393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DSN1
product: DSN1 component of MIS12 kinetochore complex, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040542540.1
SIO_010081: DSN1
subclass of: SO_0000673
so part of: DSN1
location: complement(join(682239..682393,682492..682579,682648..682795,682915..682986,683167..683226,683558..683645,684032..684104,684387..684460,684875..685132,685323..685368,685461..685508,685589..685727))
location: region:682239-685727:-1
so has part: feature:685589-685727:-1:exon
so has part: feature:685461-685508:-1:exon
so has part: feature:685323-685368:-1:exon
so has part: feature:684875-685132:-1:exon
so has part: feature:684387-684460:-1:exon
so has part: feature:684032-684104:-1:exon
so has part: feature:683558-683645:-1:exon
so has part: feature:683167-683226:-1:exon
so has part: feature:682915-682986:-1:exon
so has part: feature:682648-682795:-1:exon
so has part: feature:682492-682579:-1:exon
so has part: feature:682239-682393:-1:exon

position:685727:-1
position: 685727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685589-685727:-1:exon

position:685589:-1
position: 685589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685461-685508:-1:exon

position:685508:-1
position: 685508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685323-685368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684875-685132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:684387-684460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:684032-684104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683558-683645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:683167-683226:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682915-682986:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:682648-682795:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:682492-682579:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682239-682393:-1:exon

DSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DSN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinetochore-associated protein DSN1 homolog isoform X1
translation: MRPPQGAAISRRAPRPTAGSGGRHIGADGGVHRVPRSCRSEEMPQRAAGQETSPGGSPCAADGAVPEPDPGEKKGDAEQPVKAPDVTAVSKENVSSLVNAGAGTRKRSRGSPSPRKSPLLVSPQAKRRSWRRSSLKGTKRRKSLPPFHQDVTELCESISLDLPETDRLSVLLLSSFQFSAQKLEHVLKQTEGFSPEAFKANVNSVSEDLKRYIEKLKLDGTLKTCVEKTEMGSLDSISDESVAQAKEHIARFSAECQAWDELLQRYQKGAEEIARQLEECKANQGLAEPPNYLETSQAEVLSSKPNYQEILDAQGEVLKCVELVLDELRQAVELLRAFGEDGRQYLRGLSQHLAARTFRRLEDSPVRKLLADPRRPAPPEG
SIO_010081: DSN1
subclass of: SO_0000673
so part of: DSN1
location: complement(join(682308..682393,682492..682579,682648..682795,682915..682986,683167..683226,683558..683645,684032..684104,684387..684460,684875..685132,685323..685368,685461..685508,685589..685693))
location: region:682308-685693:-1
so has part: feature:685589-685693:-1:exon
so has part: feature:685461-685508:-1:exon
so has part: feature:685323-685368:-1:exon
so has part: feature:684875-685132:-1:exon
so has part: feature:684387-684460:-1:exon
so has part: feature:684032-684104:-1:exon
so has part: feature:683558-683645:-1:exon
so has part: feature:683167-683226:-1:exon
so has part: feature:682915-682986:-1:exon
so has part: feature:682648-682795:-1:exon
so has part: feature:682492-682579:-1:exon
so has part: feature:682308-682393:-1:exon

XP_040398474.1
type: Protein
SIO_000068: ncbiprotein

position:682308:-1
position: 682308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685693:-1
position: 685693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685589-685693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685461-685508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685323-685368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684875-685132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:684387-684460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:684032-684104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683558-683645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:683167-683226:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682915-682986:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:682648-682795:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:682492-682579:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682308-682393:-1:exon

DSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DSN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinetochore-associated protein DSN1 homolog isoform X2
translation: MPQRAAGQETSPGGSPCAADGAVPEPDPGEKKGDAEQPVKAPDVTAVSKENVSSLVNAGAGTRKRSRGSPSPRKSPLLVSPQAKRRSWRRSSLKGTKRRKSLPPFHQDVTELCESISLDLPETDRLSVLLLSSFQFSAQKLEHVLKQTEGFSPEAFKANVNSVSEDLKRYIEKLKLDGTLKTCVEKTEMGSLDSISDESVAQAKEHIARFSAECQAWDELLQRYQKGAEEIARQLEECKANQGLAEPPNYLETSQAEVLSSKPNYQEILDAQGEVLKCVELVLDELRQAVELLRAFGEDGRQYLRGLSQHLAARTFRRLEDSPVRKLLADPRRPAPPEG
SIO_010081: DSN1
subclass of: SO_0000673
so part of: DSN1
location: complement(join(682308..682393,682492..682579,682648..682795,682915..682986,683167..683226,683558..683645,684032..684104,684387..684460,684875..685132,685323..685368,685461..685487))
location: region:682308-685487:-1
so has part: feature:685461-685487:-1:exon
so has part: feature:685323-685368:-1:exon
so has part: feature:684875-685132:-1:exon
so has part: feature:684387-684460:-1:exon
so has part: feature:684032-684104:-1:exon
so has part: feature:683558-683645:-1:exon
so has part: feature:683167-683226:-1:exon
so has part: feature:682915-682986:-1:exon
so has part: feature:682648-682795:-1:exon
so has part: feature:682492-682579:-1:exon
so has part: feature:682308-682393:-1:exon

XP_040398475.1
type: Protein
SIO_000068: ncbiprotein

position:685487:-1
position: 685487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685461-685487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685323-685368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684875-685132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684387-684460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:684032-684104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:683558-683645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:683167-683226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682915-682986:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682648-682795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:682492-682579:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:682308-682393:-1:exon

PBX4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PBX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(685798..700582)
location: region:685798-700582:-1
so has part: feature:685798-700582:-1:exon
subclass of: SO_0000010

121062499
type: Gene
SIO_000068: ncbigene

position:685798:-1
position: 685798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700582:-1
position: 700582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685798-700582:-1:exon

PBX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PBX4
product: PBX homeobox 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040542537.1
SIO_010081: PBX4
subclass of: SO_0000673
so part of: PBX4
location: complement(join(685798..686617,686993..687079,687705..687811,688008..688164,688417..688552,688867..689057,689416..689657,696769..696842,700338..700582))
location: region:685798-700582:-1
so has part: feature:700338-700582:-1:exon
so has part: feature:696769-696842:-1:exon
so has part: feature:689416-689657:-1:exon
so has part: feature:688867-689057:-1:exon
so has part: feature:688417-688552:-1:exon
so has part: feature:688008-688164:-1:exon
so has part: feature:687705-687811:-1:exon
so has part: feature:686993-687079:-1:exon
so has part: feature:685798-686617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700338-700582:-1:exon

position:700338:-1
position: 700338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696769-696842:-1:exon

position:696769:-1
position: 696769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696842:-1
position: 696842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:689416-689657:-1:exon

position:689416:-1
position: 689416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689657:-1
position: 689657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:688867-689057:-1:exon

position:688867:-1
position: 688867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689057:-1
position: 689057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:688417-688552:-1:exon

position:688417:-1
position: 688417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688552:-1
position: 688552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:688008-688164:-1:exon

position:688008:-1
position: 688008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688164:-1
position: 688164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:687705-687811:-1:exon

position:687705:-1
position: 687705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687811:-1
position: 687811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:686993-687079:-1:exon

position:686993:-1
position: 686993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687079:-1
position: 687079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:685798-686617:-1:exon

position:686617:-1
position: 686617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PBX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PBX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 4
translation: MEDPARLLVAAAAAAHGAGVALPGGIPPAGGAAAAAAAGDPAAAPPPGPPPAPHDTGDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEIKEKTVLSIRGIQEEDPPDAQLMRLDNMLLAEGVSGPEKRGRGGPMAVAATSGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACSEFTTHVMNLLREQSRTRPISPKEIERMVNIIHGKFSTIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIRYKKNMGKFQEEANIYAAKTAVDATNVVAQGNQANSPSTPNSASSGSFKMTNSGDSFINLQSLTSYQSSPVGGNVQSQMDSLHHVIHQTGRYDTIVGNPLYTTQRIDANGSWQDATTPSSITSPAGDPGSVNSDASN
SIO_010081: PBX4
subclass of: SO_0000673
so part of: PBX4
location: complement(join(686525..686617,686993..687079,687705..687811,688008..688164,688417..688552,688867..689057,689416..689657,696769..696842,700338..700567))
location: region:686525-700567:-1
so has part: feature:700338-700567:-1:exon
so has part: feature:696769-696842:-1:exon
so has part: feature:689416-689657:-1:exon
so has part: feature:688867-689057:-1:exon
so has part: feature:688417-688552:-1:exon
so has part: feature:688008-688164:-1:exon
so has part: feature:687705-687811:-1:exon
so has part: feature:686993-687079:-1:exon
so has part: feature:686525-686617:-1:exon

XP_040398471.1
type: Protein
SIO_000068: ncbiprotein

position:686525:-1
position: 686525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700567:-1
position: 700567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700338-700567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696769-696842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689416-689657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:688867-689057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688417-688552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:688008-688164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:687705-687811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:686993-687079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:686525-686617:-1:exon

LPAR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LPAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(712841..731336)
location: region:712841-731336:-1
so has part: feature:712841-731336:-1:exon
subclass of: SO_0000010

121062467
type: Gene
SIO_000068: ncbigene

position:712841:-1
position: 712841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731336:-1
position: 731336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:712841-731336:-1:exon

LPAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LPAR2
product: lysophosphatidic acid receptor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040542478.1
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(712841..714501,718784..719526,723746..724493))
location: region:712841-724493:-1
so has part: feature:723746-724493:-1:exon
so has part: feature:718784-719526:-1:exon
so has part: feature:712841-714501:-1:exon

position:724493:-1
position: 724493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723746-724493:-1:exon

position:723746:-1
position: 723746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718784-719526:-1:exon

position:718784:-1
position: 718784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719526:-1
position: 719526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:712841-714501:-1:exon

position:714501:-1
position: 714501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LPAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LPAR2
product: lysophosphatidic acid receptor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040542477.1
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714118..714652,718784..719526,731274..731336))
location: region:714118-731336:-1
so has part: feature:731274-731336:-1:exon
so has part: feature:718784-719526:-1:exon
so has part: feature:714118-714652:-1:exon

position:714118:-1
position: 714118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731274-731336:-1:exon

position:731274:-1
position: 731274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718784-719526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714118-714652:-1:exon

position:714652:-1
position: 714652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LPAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LPAR2
product: lysophosphatidic acid receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040542475.1
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714118..714652,718784..719526,730790..730939))
location: region:714118-730939:-1
so has part: feature:730790-730939:-1:exon
so has part: feature:718784-719526:-1:exon
so has part: feature:714118-714652:-1:exon

position:730939:-1
position: 730939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730790-730939:-1:exon

position:730790:-1
position: 730790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718784-719526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714118-714652:-1:exon

LPAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LPAR2
product: lysophosphatidic acid receptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040542476.1
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714118..714652,718784..719526,720865..720971,723746..724481))
location: region:714118-724481:-1
so has part: feature:723746-724481:-1:exon
so has part: feature:720865-720971:-1:exon
so has part: feature:718784-719526:-1:exon
so has part: feature:714118-714652:-1:exon

position:724481:-1
position: 724481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723746-724481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720865-720971:-1:exon

position:720865:-1
position: 720865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720971:-1
position: 720971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718784-719526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:714118-714652:-1:exon

LPAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LPAR2
product: lysophosphatidic acid receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040542474.1
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714118..714652,718784..719526,723746..724480))
location: region:714118-724480:-1
so has part: feature:723746-724480:-1:exon
so has part: feature:718784-719526:-1:exon
so has part: feature:714118-714652:-1:exon

position:724480:-1
position: 724480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723746-724480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718784-719526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714118-714652:-1:exon

LPAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LPAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidic acid receptor 2 isoform X1
translation: MLNVRFGCGGCASRTAAMKHCFYNETVGFFYNNSRKELTTYWRTKDVLVVALGLTVSVIVLLTNLLVITAIIINRRFHYPIYYLLGNLAAADLFAGIAYMFLMFHTGPRTAELSLKTWFIRQSLLDTSLTASVVNLLAIAVERHQTVFTMQLHSKMSNQRVMILIFCIWVTALLLGLIPSYGWHCLCALEKCSSMAPLYSRSYLTFWAISNLVIFLIMVVVYTHIFIYVKRKMTRMSKHTSFHPRYKETMISLVKTVTIILSAFVICWTPGQVVLLLDGLGCKSCNVLAVEKYVLLLAEINSLINAIVYSYRDNEMRSTFRRILCFICYRNSKYTPTVVKLNTTDRRTLSQNGHFTVDSSI
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714351..714652,718784..719526,723746..723786))
location: region:714351-723786:-1
so has part: feature:723746-723786:-1:exon
so has part: feature:718784-719526:-1:exon
so has part: feature:714351-714652:-1:exon

XP_040398408.1
type: Protein
SIO_000068: ncbiprotein

position:714351:-1
position: 714351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723786:-1
position: 723786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723746-723786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718784-719526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714351-714652:-1:exon

LPAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LPAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidic acid receptor 2 isoform X2
translation: MKHCFYNETVGFFYNNSRKELTTYWRTKDVLVVALGLTVSVIVLLTNLLVITAIIINRRFHYPIYYLLGNLAAADLFAGIAYMFLMFHTGPRTAELSLKTWFIRQSLLDTSLTASVVNLLAIAVERHQTVFTMQLHSKMSNQRVMILIFCIWVTALLLGLIPSYGWHCLCALEKCSSMAPLYSRSYLTFWAISNLVIFLIMVVVYTHIFIYVKRKMTRMSKHTSFHPRYKETMISLVKTVTIILSAFVICWTPGQVVLLLDGLGCKSCNVLAVEKYVLLLAEINSLINAIVYSYRDNEMRSTFRRILCFICYRNSKYTPTVVKLNTTDRRTLSQNGHFTVDSSI
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714351..714652,718784..719516))
location: region:714351-719516:-1
so has part: feature:718784-719516:-1:exon
so has part: feature:714351-714652:-1:exon

XP_040398409.1
type: Protein
SIO_000068: ncbiprotein

position:719516:-1
position: 719516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718784-719516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714351-714652:-1:exon

LPAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LPAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidic acid receptor 2 isoform X2
translation: MKHCFYNETVGFFYNNSRKELTTYWRTKDVLVVALGLTVSVIVLLTNLLVITAIIINRRFHYPIYYLLGNLAAADLFAGIAYMFLMFHTGPRTAELSLKTWFIRQSLLDTSLTASVVNLLAIAVERHQTVFTMQLHSKMSNQRVMILIFCIWVTALLLGLIPSYGWHCLCALEKCSSMAPLYSRSYLTFWAISNLVIFLIMVVVYTHIFIYVKRKMTRMSKHTSFHPRYKETMISLVKTVTIILSAFVICWTPGQVVLLLDGLGCKSCNVLAVEKYVLLLAEINSLINAIVYSYRDNEMRSTFRRILCFICYRNSKYTPTVVKLNTTDRRTLSQNGHFTVDSSI
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714351..714652,718784..719516))
location: region:714351-719516:-1
so has part: feature:718784-719516:-1:exon
so has part: feature:714351-714652:-1:exon

XP_040398410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:718784-719516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714351-714652:-1:exon

LPAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LPAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidic acid receptor 2 isoform X2
translation: MKHCFYNETVGFFYNNSRKELTTYWRTKDVLVVALGLTVSVIVLLTNLLVITAIIINRRFHYPIYYLLGNLAAADLFAGIAYMFLMFHTGPRTAELSLKTWFIRQSLLDTSLTASVVNLLAIAVERHQTVFTMQLHSKMSNQRVMILIFCIWVTALLLGLIPSYGWHCLCALEKCSSMAPLYSRSYLTFWAISNLVIFLIMVVVYTHIFIYVKRKMTRMSKHTSFHPRYKETMISLVKTVTIILSAFVICWTPGQVVLLLDGLGCKSCNVLAVEKYVLLLAEINSLINAIVYSYRDNEMRSTFRRILCFICYRNSKYTPTVVKLNTTDRRTLSQNGHFTVDSSI
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714351..714652,718784..719516))
location: region:714351-719516:-1
so has part: feature:718784-719516:-1:exon
so has part: feature:714351-714652:-1:exon

XP_040398411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:718784-719516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714351-714652:-1:exon

LPAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LPAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidic acid receptor 2 isoform X3
translation: MLNVRFGCGGCASRTAAMKHCFYNETVGFFYNNSRKELTTYWRTKDVLVVALGLTVSVIVLLTNLLVITAIIINRRFHYPIYYLLGNLAAADLFAGIAYMFLMFHTGPRTAELSLKTWFIRQSLLDTSLTASVVNLLAIAVERHQTVFTMQLHSKMSNQRVMILIFCIWVTALLLGLIPSYGWHCLCALEKCSSMAPLYSRSYLTFWAISNLVIFLIMVVVYTHIFIYVKRKMTRMSKHTSFHPRYKETMISLVKTVTIILRTTRCVAHSGGSSASSVIGIPNTHPRW
SIO_010081: LPAR2
subclass of: SO_0000673
so part of: LPAR2
location: complement(join(714419..714501,718784..719526,723746..723786))
location: region:714419-723786:-1
so has part: feature:723746-723786:-1:exon
so has part: feature:718784-719526:-1:exon
so has part: feature:714419-714501:-1:exon

XP_040398412.1
type: Protein
SIO_000068: ncbiprotein

position:714419:-1
position: 714419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723746-723786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718784-719526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714419-714501:-1:exon

LOC121062470
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 731273..736352
location: region:731273-736352:1
so has part: feature:731273-736352:1:exon
subclass of: SO_0000011

121062470
type: Gene
SIO_000068: ncbigene

position:731273:1
position: 731273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736352:1
position: 736352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731273-736352:1:exon

LOC121062470
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121062470
product: uncharacterized LOC121062470
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005815567.1
SIO_010081: LOC121062470
subclass of: SO_0000673
so part of: LOC121062470
location: join(731273..731397,732139..732328,734019..736352)
location: region:731273-736352:1
so has part: feature:731273-731397:1:exon
so has part: feature:732139-732328:1:exon
so has part: feature:734019-736352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731273-731397:1:exon

position:731397:1
position: 731397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:732139-732328:1:exon

position:732139:1
position: 732139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732328:1
position: 732328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734019-736352:1:exon

position:734019:1
position: 734019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121062466
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(731799..756735)
location: region:731799-756735:-1
so has part: feature:731799-756735:-1:exon
subclass of: SO_0000010

121062466
type: Gene
SIO_000068: ncbigene

position:731799:-1
position: 731799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756735:-1
position: 756735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731799-756735:-1:exon

LOC121062466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062466
product: GEM interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040542470.1
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(731799..732328,734019..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744575,744651..744744,754442..754552))
location: region:731799-754552:-1
so has part: feature:754442-754552:-1:exon
so has part: feature:744651-744744:-1:exon
so has part: feature:744500-744575:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:734019-734474:-1:exon
so has part: feature:731799-732328:-1:exon

position:754552:-1
position: 754552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754442-754552:-1:exon

position:754442:-1
position: 754442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744651-744744:-1:exon

position:744651:-1
position: 744651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744744:-1
position: 744744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:744500-744575:-1:exon

position:744500:-1
position: 744500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744575:-1
position: 744575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:743615-743678:-1:exon

position:743615:-1
position: 743615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743678:-1
position: 743678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:742818-742943:-1:exon

position:742818:-1
position: 742818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742943:-1
position: 742943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:742489-742553:-1:exon

position:742489:-1
position: 742489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742553:-1
position: 742553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:741941-742051:-1:exon

position:741941:-1
position: 741941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742051:-1
position: 742051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:741620-741700:-1:exon

position:741620:-1
position: 741620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741700:-1
position: 741700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:741089-741277:-1:exon

position:741089:-1
position: 741089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741277:-1
position: 741277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:740833-740970:-1:exon

position:740833:-1
position: 740833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740970:-1
position: 740970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:740250-740440:-1:exon

position:740250:-1
position: 740250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740440:-1
position: 740440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:739831-739943:-1:exon

position:739831:-1
position: 739831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739943:-1
position: 739943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:738972-739058:-1:exon

position:738972:-1
position: 738972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739058:-1
position: 739058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:738629-738727:-1:exon

position:738629:-1
position: 738629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738727:-1
position: 738727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:738404-738543:-1:exon

position:738404:-1
position: 738404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738543:-1
position: 738543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:737943-738131:-1:exon

position:737943:-1
position: 737943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738131:-1
position: 738131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:737705-737842:-1:exon

position:737705:-1
position: 737705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737842:-1
position: 737842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:737403-737599:-1:exon

position:737403:-1
position: 737403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737599:-1
position: 737599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:736553-736847:-1:exon

position:736553:-1
position: 736553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736847:-1
position: 736847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:734975-735095:-1:exon

position:734975:-1
position: 734975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735095:-1
position: 735095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:734019-734474:-1:exon

position:734019:-1
position: 734019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734474:-1
position: 734474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:731799-732328:-1:exon

position:732328:-1
position: 732328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121062466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062466
product: GEM interacting protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040542471.1
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(731801..732328,734019..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744575,744651..744744,751000..751243))
location: region:731801-751243:-1
so has part: feature:751000-751243:-1:exon
so has part: feature:744651-744744:-1:exon
so has part: feature:744500-744575:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:734019-734474:-1:exon
so has part: feature:731801-732328:-1:exon

position:731801:-1
position: 731801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751243:-1
position: 751243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751000-751243:-1:exon

position:751000:-1
position: 751000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744651-744744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744500-744575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:734019-734474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:731801-732328:-1:exon

LOC121062466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-interacting protein isoform X2
translation: MESFHTRLSTCTWVYKAHATTEAEFNCLDSQERVPENKKRYSEIFRSLDDLEISIGNATVDLFIGDADSTDDTDLPAEREIVPLSESFCKSKSSSEKQAQADMTVEEADEMLIKCEGGIDAALEYAKMWCKYVKELLNWIEKRLSYETEFAKGIVKIAESGRNAIIQQFNMPLRALYAMVLEHDIKVGNSASETVGLLQQKEFYQPLSAKKNEIEKWRKEFKDQWTKEQKRMNESLSSLRKSRLQYVQRCEELEKAKYLSAKAEDEYQSAAVVNPGSASKQLEKRRRSCEEAQAKVQETEALYKMCINDANFRRQELEKVRARIVSHIRKLIYQGDEVLTWVTLRMFKQRQAQSEHIPVGYQHLAEVCKPYKVGEKYLEFIQALQKKDIHMEVFEFEPLASGGQRSPPSSRKKMSLQYTGCSKDASTPEDTSRRQFSPNGEQSTNRSLCSDTESLGGSCESRSLDSPNSSPGNSNRKLLKAPSTGTMSSSDDFEERDSLQTFENENGSSQQQFRNILLSSAAQTHRLRKLRGPSKCRDCDTFMVNGFECEECYLACHKKCLESLLITCGHRKLPNRVPLFGIDFTQVPRDFPEEVPFIVVKCTSEIEARALGVQGIYRISGSKARVEKLCQAFENGRSLVELSEHSPHDITGVLKHFLKELSGPVLLYQLYNSLIALAKELQKPGEERTDCAGFPLDPIQSMKDLLSKLPGSNYNTLRHLIAHLYRVAEKYEENKMSPNNLGIVFGPTLIRPGSGSDVSMSCLVDSGYQAQIVEFLIQNYERVFGMDDLPPSLSLSCENPSQEASAEKDEGHQSPSTVQKITLENFSSQHGLSVDCVSDNSSSREAVSELTLEGAPSPLSTDALEMNTSTGSELEDLEDSVQEKTDSDSDTVLGTQPRCHFSRQPVKYIRVQAKTKPVIPKPSSLPLRTTTLSSMAMDAGAEGSPANSSSTAKDVLGERTRSRNSSPDTSTLRGRSGSKQQLKHFEITEETARIISKLKADDTSASPEGSLESLGSACNSSLLAAFCRAGNLLGLRAAKASFPAGAVQLPGLTHTGRAWTQRQKPFPPA
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(732168..732328,734019..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744575,744651..744744,754442..754520))
location: region:732168-754520:-1
so has part: feature:754442-754520:-1:exon
so has part: feature:744651-744744:-1:exon
so has part: feature:744500-744575:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:734019-734474:-1:exon
so has part: feature:732168-732328:-1:exon

XP_040398404.1
type: Protein
SIO_000068: ncbiprotein

position:732168:-1
position: 732168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754520:-1
position: 754520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754442-754520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744651-744744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744500-744575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:734019-734474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:732168-732328:-1:exon

LOC121062466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-interacting protein isoform X3
translation: MGDPEPSGLDSQERVPENKKRYSEIFRSLDDLEISIGNATVDLFIGDADSTDDTDLPAEREIVPLSESFCKSKSSSEKQAQADMTVEEADEMLIKCEGGIDAALEYAKMWCKYVKELLNWIEKRLSYETEFAKGIVKIAESGRNAIIQQFNMPLRALYAMVLEHDIKVGNSASETVGLLQQKEFYQPLSAKKNEIEKWRKEFKDQWTKEQKRMNESLSSLRKSRLQYVQRCEELEKAKYLSAKAEDEYQSAAVVNPGSASKQLEKRRRSCEEAQAKVQETEALYKMCINDANFRRQELEKVRARIVSHIRKLIYQGDEVLTWVTLRMFKQRQAQSEHIPVGYQHLAEVCKPYKVGEKYLEFIQALQKKDIHMEVFEFEPLASGGQRSPPSSRKKMSLQYTGCSKDASTPEDTSRRQFSPNGEQSTNRSLCSDTESLGGSCESRSLDSPNSSPGNSNRKLLKAPSTGTMSSSDDFEERDSLQTFENENGSSQQQFRNILLSSAAQTHRLRKLRGPSKCRDCDTFMVNGFECEECYLACHKKCLESLLITCGHRKLPNRVPLFGIDFTQVPRDFPEEVPFIVVKCTSEIEARALGVQGIYRISGSKARVEKLCQAFENGRSLVELSEHSPHDITGVLKHFLKELSGPVLLYQLYNSLIALAKELQKPGEERTDCAGFPLDPIQSMKDLLSKLPGSNYNTLRHLIAHLYRVAEKYEENKMSPNNLGIVFGPTLIRPGSGSDVSMSCLVDSGYQAQIVEFLIQNYERVFGMDDLPPSLSLSCENPSQEASAEKDEGHQSPSTVQKITLENFSSQHGLSVDCVSDNSSSREAVSELTLEGAPSPLSTDALEMNTSTGSELEDLEDSVQEKTDSDSDTVLGTQPRCHFSRQPVKYIRVQAKTKPVIPKPSSLPLRTTTLSSMAMDAGAEGSPANSSSTAKDVLGERTRSRNSSPDTSTLRGRSGSKQQLKHFEITEETARIISKLKADDTSASPEGSLESLGSACNSSLLAAFCRAGNLLGLRAAKASFPAGAVQLPGLTHTGRAWTQRQKPFPPA
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(732168..732328,734019..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744575,744651..744744,751000..751021))
location: region:732168-751021:-1
so has part: feature:751000-751021:-1:exon
so has part: feature:744651-744744:-1:exon
so has part: feature:744500-744575:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:734019-734474:-1:exon
so has part: feature:732168-732328:-1:exon

XP_040398405.1
type: Protein
SIO_000068: ncbiprotein

position:751021:-1
position: 751021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751000-751021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744651-744744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744500-744575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:734019-734474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:732168-732328:-1:exon

LOC121062466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062466
product: GEM interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040542469.1
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(732336..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744575,744651..744744,754583..754720,755492..756735))
location: region:732336-756735:-1
so has part: feature:755492-756735:-1:exon
so has part: feature:754583-754720:-1:exon
so has part: feature:744651-744744:-1:exon
so has part: feature:744500-744575:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:732336-734474:-1:exon

position:732336:-1
position: 732336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755492-756735:-1:exon

position:755492:-1
position: 755492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754583-754720:-1:exon

position:754583:-1
position: 754583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754720:-1
position: 754720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:744651-744744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744500-744575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:732336-734474:-1:exon

LOC121062466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062466
product: GEM interacting protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040542473.1
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(732336..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744575,744651..744744,751000..751243))
location: region:732336-751243:-1
so has part: feature:751000-751243:-1:exon
so has part: feature:744651-744744:-1:exon
so has part: feature:744500-744575:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:732336-734474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751000-751243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744651-744744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744500-744575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:732336-734474:-1:exon

LOC121062466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121062466
product: GEM interacting protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040542472.1
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(732336..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744744,751000..751242))
location: region:732336-751242:-1
so has part: feature:751000-751242:-1:exon
so has part: feature:744500-744744:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:732336-734474:-1:exon

position:751242:-1
position: 751242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751000-751242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744500-744744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:732336-734474:-1:exon

LOC121062466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-interacting protein isoform X1
translation: MNGTGAWDDAGSARTVGRLPHSRLLPPGHDSEFLAAVWASVQSPVPGDQGSRRDPMAGEVSRVAKHLRDIDGRFQNLRELFRKGEVFSGPVEARLADLLQAISSFLNTYPALTGDAIQPAVATLITKIHGLDSQERVPENKKRYSEIFRSLDDLEISIGNATVDLFIGDADSTDDTDLPAEREIVPLSESFCKSKSSSEKQAQADMTVEEADEMLIKCEGGIDAALEYAKMWCKYVKELLNWIEKRLSYETEFAKGIVKIAESGRNAIIQQFNMPLRALYAMVLEHDIKVGNSASETVGLLQQKEFYQPLSAKKNEIEKWRKEFKDQWTKEQKRMNESLSSLRKSRLQYVQRCEELEKAKYLSAKAEDEYQSAAVVNPGSASKQLEKRRRSCEEAQAKVQETEALYKMCINDANFRRQELEKVRARIVSHIRKLIYQGDEVLTWVTLRMFKQRQAQSEHIPVGYQHLAEVCKPYKVGEKYLEFIQALQKKDIHMEVFEFEPLASGGQRSPPSSRKKMSLQYTGCSKDASTPEDTSRRQFSPNGEQSTNRSLCSDTESLGGSCESRSLDSPNSSPGNSNRKLLKAPSTGTMSSSDDFEERDSLQTFENENGSSQQQFRNILLSSAAQTHRLRKLRGPSKCRDCDTFMVNGFECEECYLACHKKCLESLLITCGHRKLPNRVPLFGIDFTQVPRDFPEEVPFIVVKCTSEIEARALGVQGIYRISGSKARVEKLCQAFENGRSLVELSEHSPHDITGVLKHFLKELSGPVLLYQLYNSLIALAKELQKPGEERTDCAGFPLDPIQSMKDLLSKLPGSNYNTLRHLIAHLYRVAEKYEENKMSPNNLGIVFGPTLIRPGSGSDVSMSCLVDSGYQAQIVEFLIQNYERVFGMDDLPPSLSLSCENPSQEASAEKDEGHQSPSTVQKITLENFSSQHGLSVDCVSDNSSSREAVSELTLEGAPSPLSTDALEMNTSTGSELEDLEDSVQEKTDSDSDTVLGTQPRCHFSRQPVKYIRVQAKTKPVIPKPSSLPLRTTTLSSMAMDAGAEGSPANSSSTAKDVLGERTRSRNSSPDTSTLRGRSGSKQQLKHFEITEETARIISKLKADDTSASPEGSLESLGSAEKEVKLSPETLPEQSP
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(733966..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744575,744651..744744,754583..754720,755492..755741))
location: region:733966-755741:-1
so has part: feature:755492-755741:-1:exon
so has part: feature:754583-754720:-1:exon
so has part: feature:744651-744744:-1:exon
so has part: feature:744500-744575:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:733966-734474:-1:exon

XP_040398403.1
type: Protein
SIO_000068: ncbiprotein

position:733966:-1
position: 733966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755741:-1
position: 755741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755492-755741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754583-754720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744651-744744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744500-744575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:733966-734474:-1:exon

LOC121062466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-interacting protein isoform X5
translation: MGDPEPSGLDSQERVPENKKRYSEIFRSLDDLEISIGNATVDLFIGDADSTDDTDLPAEREIVPLSESFCKSKSSSEKQAQADMTVEEADEMLIKCEGGIDAALEYAKMWCKYVKELLNWIEKRLSYETEFAKGIVKIAESGRNAIIQQFNMPLRALYAMVLEHDIKVGNSASETVGLLQQKEFYQPLSAKKNEIEKWRKEFKDQWTKEQKRMNESLSSLRKSRLQYVQRCEELEKAKYLSAKAEDEYQSAAVVNPGSASKQLEKRRRSCEEAQAKVQETEALYKMCINDANFRRQELEKVRARIVSHIRKLIYQGDEVLTWVTLRMFKQRQAQSEHIPVGYQHLAEVCKPYKVGEKYLEFIQALQKKDIHMEVFEFEPLASGGQRSPPSSRKKMSLQYTGCSKDASTPEDTSRRQFSPNGEQSTNRSLCSDTESLGGSCESRSLDSPNSSPGNSNRKLLKAPSTGTMSSSDDFEERDSLQTFENENGSSQQQFRNILLSSAAQTHRLRKLRGPSKCRDCDTFMVNGFECEECYLACHKKCLESLLITCGHRKLPNRVPLFGIDFTQVPRDFPEEVPFIVVKCTSEIEARALGVQGIYRISGSKARVEKLCQAFENGRSLVELSEHSPHDITGVLKHFLKELSGPVLLYQLYNSLIALAKELQKPGEERTDCAGFPLDPIQSMKDLLSKLPGSNYNTLRHLIAHLYRVAEKYEENKMSPNNLGIVFGPTLIRPGSGSDVSMSCLVDSGYQAQIVEFLIQNYERVFGMDDLPPSLSLSCENPSQEASAEKDEGHQSPSTVQKITLENFSSQHGLSVDCVSDNSSSREAVSELTLEGAPSPLSTDALEMNTSTGSELEDLEDSVQEKTDSDSDTVLGTQPRCHFSRQPVKYIRVQAKTKPVIPKPSSLPLRTTTLSSMAMDAGAEGSPANSSSTAKDVLGERTRSRNSSPDTSTLRGRSGSKQQLKHFEITEETARIISKLKADDTSASPEGSLESLGSAEKEVKLSPETLPEQSP
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(733966..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744575,744651..744744,751000..751021))
location: region:733966-751021:-1
so has part: feature:751000-751021:-1:exon
so has part: feature:744651-744744:-1:exon
so has part: feature:744500-744575:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:733966-734474:-1:exon

XP_040398407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751000-751021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744651-744744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744500-744575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:733966-734474:-1:exon

LOC121062466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121062466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GEM-interacting protein isoform X4
translation: MGDPEPSGLDSQERVPENKKRYSEIFRSLDDLEISIGNAYVEIRGRTTSLGLCSPNLSFLSFYRTVDLFIGDADSTDDTDLPAEREIVPLSESFCKSKSSSEKQAQADMTVEEADEMLIKCEGGIDAALEYAKMWCKYVKELLNWIEKRLSYETEFAKGIVKIAESGRNAIIQQFNMPLRALYAMVLEHDIKVGNSASETVGLLQQKEFYQPLSAKKNEIEKWRKEFKDQWTKEQKRMNESLSSLRKSRLQYVQRCEELEKAKYLSAKAEDEYQSAAVVNPGSASKQLEKRRRSCEEAQAKVQETEALYKMCINDANFRRQELEKVRARIVSHIRKLIYQGDEVLTWVTLRMFKQRQAQSEHIPVGYQHLAEVCKPYKVGEKYLEFIQALQKKDIHMEVFEFEPLASGGQRSPPSSRKKMSLQYTGCSKDASTPEDTSRRQFSPNGEQSTNRSLCSDTESLGGSCESRSLDSPNSSPGNSNRKLLKAPSTGTMSSSDDFEERDSLQTFENENGSSQQQFRNILLSSAAQTHRLRKLRGPSKCRDCDTFMVNGFECEECYLACHKKCLESLLITCGHRKLPNRVPLFGIDFTQVPRDFPEEVPFIVVKCTSEIEARALGVQGIYRISGSKARVEKLCQAFENGRSLVELSEHSPHDITGVLKHFLKELSGPVLLYQLYNSLIALAKELQKPGEERTDCAGFPLDPIQSMKDLLSKLPGSNYNTLRHLIAHLYRVAEKYEENKMSPNNLGIVFGPTLIRPGSGSDVSMSCLVDSGYQAQIVEFLIQNYERVFGMDDLPPSLSLSCENPSQEASAEKDEGHQSPSTVQKITLENFSSQHGLSVDCVSDNSSSREAVSELTLEGAPSPLSTDALEMNTSTGSELEDLEDSVQEKTDSDSDTVLGTQPRCHFSRQPVKYIRVQAKTKPVIPKPSSLPLRTTTLSSMAMDAGAEGSPANSSSTAKDVLGERTRSRNSSPDTSTLRGRSGSKQQLKHFEITEETARIISKLKADDTSASPEGSLESLGSAEKEVKLSPETLPEQSP
SIO_010081: LOC121062466
subclass of: SO_0000673
so part of: LOC121062466
location: complement(join(733966..734474,734975..735095,736553..736847,737403..737599,737705..737842,737943..738131,738404..738543,738629..738727,738972..739058,739831..739943,740250..740440,740833..740970,741089..741277,741620..741700,741941..742051,742489..742553,742818..742943,743615..743678,744500..744744,751000..751021))
location: region:733966-751021:-1
so has part: feature:751000-751021:-1:exon
so has part: feature:744500-744744:-1:exon
so has part: feature:743615-743678:-1:exon
so has part: feature:742818-742943:-1:exon
so has part: feature:742489-742553:-1:exon
so has part: feature:741941-742051:-1:exon
so has part: feature:741620-741700:-1:exon
so has part: feature:741089-741277:-1:exon
so has part: feature:740833-740970:-1:exon
so has part: feature:740250-740440:-1:exon
so has part: feature:739831-739943:-1:exon
so has part: feature:738972-739058:-1:exon
so has part: feature:738629-738727:-1:exon
so has part: feature:738404-738543:-1:exon
so has part: feature:737943-738131:-1:exon
so has part: feature:737705-737842:-1:exon
so has part: feature:737403-737599:-1:exon
so has part: feature:736553-736847:-1:exon
so has part: feature:734975-735095:-1:exon
so has part: feature:733966-734474:-1:exon

XP_040398406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751000-751021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744500-744744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743615-743678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742818-742943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742489-742553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741941-742051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741620-741700:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741089-741277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:740833-740970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:740250-740440:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739831-739943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738972-739058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738629-738727:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:738404-738543:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:737943-738131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737705-737842:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:737403-737599:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:736553-736847:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:734975-735095:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:733966-734474:-1:exon

LOC121062471
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121062471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 753973..757363
location: region:753973-757363:1
so has part: feature:753973-757363:1:exon
subclass of: SO_0000011

121062471
type: Gene
SIO_000068: ncbigene

position:753973:1
position: 753973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757363:1
position: 757363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753973-757363:1:exon

LOC121062471
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121062471
product: uncharacterized LOC121062471
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005815568.1
SIO_010081: LOC121062471
subclass of: SO_0000673
so part of: LOC121062471
location: join(753973..754071,756672..757363)
location: region:753973-757363:1
so has part: feature:753973-754071:1:exon
so has part: feature:756672-757363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753973-754071:1:exon

position:754071:1
position: 754071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition