Cygnus olor isolate bCygOlo1 chromosome 25, bCygOlo1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Cygnus olor isolate bCygOlo1 chromosome 25, bCygOlo1.pri.v2, whole genome shotgun sequence.
sequence version: NC_049193.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_049193.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA642912
dblink: SAMN12621369
keyword: WGS
keyword: RefSeq
source: Cygnus olor (mute swan)
organism: Cygnus olor
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020089.2.\nAssembly name: bCygOlo1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/31. The original whole-genome shotgun project has the\naccession WNMI00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v. 1.0.3+\n 1.Nov.2018; scaff10x v. 4.1.0; Bionano\n solve v. 3.2.1_04122018; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2020-11-30; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bCygOlo1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.23x\nSequencing Technology :: PacBio Sequel 1 CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cygnus olor Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6703957
topology: linear
so has quality: SO_0000987
location: 1..6703957
location: region:1-6703957:1
RO_0002162: 8869

NC_049193
type: RefSeq
SIO_000068: refseq

PRJNA642912
type: BioProject
SIO_000068: bioproject

SAMN12621369
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6703957:1
position: 6703957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6703957:1:source
so part of: sequence
organism: Cygnus olor
mol type: genomic DNA
isolate: bCygOlo1
chromosome: 25
sex: male
tissue type: muscle
dev stage: adult
country: Germany: Mainau
lat lon: 50.149850 N 11.063270 E
collection date: 2015-07-01
collected by: Robert Kraus

8869
type: Taxonomy
SIO_000068: taxonomy

LOC121059925
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059925
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(22001..22193)
location: region:22001-22193:-1
so has part: feature:22001-22193:-1:exon
subclass of: SO_0000623

121059925
type: Gene
SIO_000068: ncbigene

position:22001:-1
position: 22001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22193:-1
position: 22193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22001-22193:-1:exon

LOC121059925
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: snRNA
gene: LOC121059925
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005814686.1
SIO_010081: LOC121059925
subclass of: SO_0000673
so part of: LOC121059925
location: complement(22001..22193)
location: region:22001-22193:-1
so has part: feature:22001-22193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22001-22193:-1:exon

LOC121059873
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23676..25647)
location: region:23676-25647:-1
so has part: feature:23676-25647:-1:exon
subclass of: SO_0000011

121059873
type: Gene
SIO_000068: ncbigene

position:23676:-1
position: 23676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25647:-1
position: 25647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23676-25647:-1:exon

LOC121059873
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059873
product: uncharacterized LOC121059873, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005814675.1
SIO_010081: LOC121059873
subclass of: SO_0000673
so part of: LOC121059873
location: complement(join(23676..24048,24561..24783,24867..24981,25085..25268,25515..25647))
location: region:23676-25647:-1
so has part: feature:25515-25647:-1:exon
so has part: feature:25085-25268:-1:exon
so has part: feature:24867-24981:-1:exon
so has part: feature:24561-24783:-1:exon
so has part: feature:23676-24048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25515-25647:-1:exon

position:25515:-1
position: 25515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25085-25268:-1:exon

position:25085:-1
position: 25085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25268:-1
position: 25268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24867-24981:-1:exon

position:24867:-1
position: 24867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24981:-1
position: 24981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24561-24783:-1:exon

position:24561:-1
position: 24561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24783:-1
position: 24783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23676-24048:-1:exon

position:24048:-1
position: 24048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059873
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059873
product: uncharacterized LOC121059873, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005814676.1
SIO_010081: LOC121059873
subclass of: SO_0000673
so part of: LOC121059873
location: complement(join(23676..24048,24561..24783,25465..25647))
location: region:23676-25647:-1
so has part: feature:25465-25647:-1:exon
so has part: feature:24561-24783:-1:exon
so has part: feature:23676-24048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25465-25647:-1:exon

position:25465:-1
position: 25465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24561-24783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23676-24048:-1:exon

LOC121059873
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059873
product: uncharacterized LOC121059873, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814673.1
SIO_010081: LOC121059873
subclass of: SO_0000673
so part of: LOC121059873
location: complement(join(23676..24048,24561..24783,25444..25647))
location: region:23676-25647:-1
so has part: feature:25444-25647:-1:exon
so has part: feature:24561-24783:-1:exon
so has part: feature:23676-24048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25444-25647:-1:exon

position:25444:-1
position: 25444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24561-24783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23676-24048:-1:exon

LOC121059873
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059873
product: uncharacterized LOC121059873, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814674.1
SIO_010081: LOC121059873
subclass of: SO_0000673
so part of: LOC121059873
location: complement(join(23676..24048,24561..24783,25398..25647))
location: region:23676-25647:-1
so has part: feature:25398-25647:-1:exon
so has part: feature:24561-24783:-1:exon
so has part: feature:23676-24048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25398-25647:-1:exon

position:25398:-1
position: 25398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24561-24783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23676-24048:-1:exon

LOC121059873
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059873
product: uncharacterized LOC121059873, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814677.1
SIO_010081: LOC121059873
subclass of: SO_0000673
so part of: LOC121059873
location: complement(join(23676..24048,24561..24783,24867..24981,25085..25268,25562..25578))
location: region:23676-25578:-1
so has part: feature:25562-25578:-1:exon
so has part: feature:25085-25268:-1:exon
so has part: feature:24867-24981:-1:exon
so has part: feature:24561-24783:-1:exon
so has part: feature:23676-24048:-1:exon

position:25578:-1
position: 25578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25562-25578:-1:exon

position:25562:-1
position: 25562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25085-25268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24867-24981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24561-24783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23676-24048:-1:exon

PHB
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 27258..32795
location: region:27258-32795:1
so has part: feature:27258-32795:1:exon
subclass of: SO_0000010

121059878
type: Gene
SIO_000068: ncbigene

position:27258:1
position: 27258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32795:1
position: 32795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27258-32795:1:exon

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHB
product: prohibitin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537062.1
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(27258..27398,27963..28088,28486..28647,29164..29306,30082..30198,31335..31430,32424..32795)
location: region:27258-32795:1
so has part: feature:27258-27398:1:exon
so has part: feature:27963-28088:1:exon
so has part: feature:28486-28647:1:exon
so has part: feature:29164-29306:1:exon
so has part: feature:30082-30198:1:exon
so has part: feature:31335-31430:1:exon
so has part: feature:32424-32795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27258-27398:1:exon

position:27398:1
position: 27398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27963-28088:1:exon

position:27963:1
position: 27963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28088:1
position: 28088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28486-28647:1:exon

position:28486:1
position: 28486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28647:1
position: 28647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29164-29306:1:exon

position:29164:1
position: 29164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29306:1
position: 29306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30082-30198:1:exon

position:30082:1
position: 30082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30198:1
position: 30198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31335-31430:1:exon

position:31335:1
position: 31335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31430:1
position: 31430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:32424-32795:1:exon

position:32424:1
position: 32424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHB
product: prohibitin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040537063.1
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(27417..27581,27963..28088,28486..28647,29164..29306,30082..30198,31335..31430,32424..32795)
location: region:27417-32795:1
so has part: feature:27417-27581:1:exon
so has part: feature:27963-28088:1:exon
so has part: feature:28486-28647:1:exon
so has part: feature:29164-29306:1:exon
so has part: feature:30082-30198:1:exon
so has part: feature:31335-31430:1:exon
so has part: feature:32424-32795:1:exon

position:27417:1
position: 27417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27417-27581:1:exon

position:27581:1
position: 27581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27963-28088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28486-28647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29164-29306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30082-30198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31335-31430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32424-32795:1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin
translation: MAAKVFESLGKFGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(28001..28088,28486..28647,29164..29306,30082..30198,31335..31430,32424..32636)
location: region:28001-32636:1
so has part: feature:28001-28088:1:exon
so has part: feature:28486-28647:1:exon
so has part: feature:29164-29306:1:exon
so has part: feature:30082-30198:1:exon
so has part: feature:31335-31430:1:exon
so has part: feature:32424-32636:1:exon

XP_040392996.1
type: Protein
SIO_000068: ncbiprotein

position:28001:1
position: 28001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32636:1
position: 32636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28001-28088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28486-28647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29164-29306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30082-30198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31335-31430:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32424-32636:1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin
translation: MAAKVFESLGKFGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(28001..28088,28486..28647,29164..29306,30082..30198,31335..31430,32424..32636)
location: region:28001-32636:1
so has part: feature:28001-28088:1:exon
so has part: feature:28486-28647:1:exon
so has part: feature:29164-29306:1:exon
so has part: feature:30082-30198:1:exon
so has part: feature:31335-31430:1:exon
so has part: feature:32424-32636:1:exon

XP_040392997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28001-28088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28486-28647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29164-29306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30082-30198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31335-31430:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32424-32636:1:exon

ZNF652
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 40818..71309
location: region:40818-71309:1
so has part: feature:40818-71309:1:exon
subclass of: SO_0000010

121059874
type: Gene
SIO_000068: ncbigene

position:40818:1
position: 40818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71309:1
position: 71309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40818-71309:1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZNF652
product: zinc finger protein 652, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040537048.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(40818..40836,58013..59172,62573..62720,63029..63144,65903..66047,66451..71309)
location: region:40818-71309:1
so has part: feature:40818-40836:1:exon
so has part: feature:58013-59172:1:exon
so has part: feature:62573-62720:1:exon
so has part: feature:63029-63144:1:exon
so has part: feature:65903-66047:1:exon
so has part: feature:66451-71309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40818-40836:1:exon

position:40836:1
position: 40836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58013-59172:1:exon

position:58013:1
position: 58013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59172:1
position: 59172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62573-62720:1:exon

position:62573:1
position: 62573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62720:1
position: 62720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63029-63144:1:exon

position:63029:1
position: 63029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63144:1
position: 63144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:65903-66047:1:exon

position:65903:1
position: 65903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66047:1
position: 66047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:66451-71309:1:exon

position:66451:1
position: 66451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZNF652
product: zinc finger protein 652, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537047.1
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(41028..41348,58013..59172,62573..62720,63029..63144,65903..66047,66451..71309)
location: region:41028-71309:1
so has part: feature:41028-41348:1:exon
so has part: feature:58013-59172:1:exon
so has part: feature:62573-62720:1:exon
so has part: feature:63029-63144:1:exon
so has part: feature:65903-66047:1:exon
so has part: feature:66451-71309:1:exon

position:41028:1
position: 41028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41028-41348:1:exon

position:41348:1
position: 41348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58013-59172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62573-62720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63029-63144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65903-66047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66451-71309:1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTTNSCQQLVENCAVHVAGMAQEDSHRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEESNDDEENERQKKKEKRVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSVEPPKRKKKAAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSSAVQIALSTASPATTVPAVVNTPTTPTPPMNLNPVNTLPPRPIPHPYSHLHLHPHPHHPHHLPVPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(58264..59172,62573..62720,63029..63144,65903..66047,66451..66965)
location: region:58264-66965:1
so has part: feature:58264-59172:1:exon
so has part: feature:62573-62720:1:exon
so has part: feature:63029-63144:1:exon
so has part: feature:65903-66047:1:exon
so has part: feature:66451-66965:1:exon

XP_040392981.1
type: Protein
SIO_000068: ncbiprotein

position:58264:1
position: 58264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66965:1
position: 66965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58264-59172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62573-62720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63029-63144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65903-66047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66451-66965:1:exon

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQTTNSCQQLVENCAVHVAGMAQEDSHRGQVPPTFYHGASQELDLSTKVYKRESGSPYSVLVDSKMSKPHLHEREEQPYFRENRSVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKTSSEEEEGDSGEEATEESNDDEENERQKKKEKRVEKVSVAQRRTRRAASAAAATTSPSPRTTRGRRKSVEPPKRKKKAAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPVNVSSAVQIALSTASPATTVPAVVNTPTTPTPPMNLNPVNTLPPRPIPHPYSHLHLHPHPHHPHHLPVPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKNSSAQHH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(58264..59172,62573..62720,63029..63144,65903..66047,66451..66965)
location: region:58264-66965:1
so has part: feature:58264-59172:1:exon
so has part: feature:62573-62720:1:exon
so has part: feature:63029-63144:1:exon
so has part: feature:65903-66047:1:exon
so has part: feature:66451-66965:1:exon

XP_040392982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58264-59172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62573-62720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63029-63144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65903-66047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66451-66965:1:exon

PHOSPHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 81040..89988
location: region:81040-89988:1
so has part: feature:81040-89988:1:exon
subclass of: SO_0000010

121059876
type: Gene
SIO_000068: ncbigene

position:81040:1
position: 81040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89988:1
position: 89988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81040-89988:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537059.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81040..81175,86473..86589,86804..86893,87450..88827)
location: region:81040-88827:1
so has part: feature:81040-81175:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88827:1:exon

position:88827:1
position: 88827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81040-81175:1:exon

position:81175:1
position: 81175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86473-86589:1:exon

position:86473:1
position: 86473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86589:1
position: 86589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:86804-86893:1:exon

position:86804:1
position: 86804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86893:1
position: 86893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87450-88827:1:exon

position:87450:1
position: 87450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537058.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81377..81514,83477..83579,86303..86589,86804..86893,87450..88827)
location: region:81377-88827:1
so has part: feature:81377-81514:1:exon
so has part: feature:83477-83579:1:exon
so has part: feature:86303-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88827:1:exon

position:81377:1
position: 81377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81377-81514:1:exon

position:81514:1
position: 81514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83477-83579:1:exon

position:83477:1
position: 83477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83579:1
position: 83579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:86303-86589:1:exon

position:86303:1
position: 86303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87450-88827:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040537054.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81377..81514,83477..83579,86473..86589,86804..86893,87450..88827)
location: region:81377-88827:1
so has part: feature:81377-81514:1:exon
so has part: feature:83477-83579:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81377-81514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83477-83579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86473-86589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87450-88827:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040537052.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81382..81514,86473..86589,86804..86893,87450..89988)
location: region:81382-89988:1
so has part: feature:81382-81514:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-89988:1:exon

position:81382:1
position: 81382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81382-81514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86473-86589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87450-89988:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040537061.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81382..81514,86473..86589,87450..89988)
location: region:81382-89988:1
so has part: feature:81382-81514:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:87450-89988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81382-81514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86473-86589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-89988:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040537055.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81424..81514,82628..83579,86473..86589,86804..86893,87450..88827)
location: region:81424-88827:1
so has part: feature:81424-81514:1:exon
so has part: feature:82628-83579:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88827:1:exon

position:81424:1
position: 81424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81424-81514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82628-83579:1:exon

position:82628:1
position: 82628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:86473-86589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87450-88827:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040537057.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81701..81825,83477..83579,86473..86589,86804..86893,87450..88827)
location: region:81701-88827:1
so has part: feature:81701-81825:1:exon
so has part: feature:83477-83579:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88827:1:exon

position:81701:1
position: 81701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81701-81825:1:exon

position:81825:1
position: 81825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83477-83579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86473-86589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87450-88827:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040537051.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81989..83579,86473..86589,86804..86893,87450..88827)
location: region:81989-88827:1
so has part: feature:81989-83579:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88827:1:exon

position:81989:1
position: 81989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81989-83579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86473-86589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87450-88827:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537060.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81989..83579,86473..86589,87450..88827)
location: region:81989-88827:1
so has part: feature:81989-83579:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:87450-88827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81989-83579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86473-86589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88827:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040537056.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81989..82840,83477..83579,86303..86589,86804..86893,87450..88827)
location: region:81989-88827:1
so has part: feature:81989-82840:1:exon
so has part: feature:83477-83579:1:exon
so has part: feature:86303-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81989-82840:1:exon

position:82840:1
position: 82840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83477-83579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86303-86589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87450-88827:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040537053.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(81989..82840,83477..83579,86473..86589,86804..86893,87450..88827)
location: region:81989-88827:1
so has part: feature:81989-82840:1:exon
so has part: feature:83477-83579:1:exon
so has part: feature:86473-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81989-82840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83477-83579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86473-86589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87450-88827:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392985.1
type: Protein
SIO_000068: ncbiprotein

position:86545:1
position: 86545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88208:1
position: 88208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MKRCCEGVGLPCLFKRQAGPSSELPWAFWESMVPAEPNPEANHVQGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,86804..86893,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:86804-86893:1:exon
so has part: feature:87450-88208:1:exon

XP_040392993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86804-86893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X2
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:87450-88208:1:exon

XP_040392994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87450-88208:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X2
translation: MKRCCEGVGLPCLFKGVGMASSQPPKYLLIFDFDETIINENSDDSIIRAAPGQALPEHIRQTFCEGFYNEYMQRVLTYMGDQGVKMGDFKTVYENIPLSPGMPDLFQFLSKNHEVFEIILISDANMFGIECNLRAAGFYSLFRKIFSNPSSFDKRGYFTLGPYHSHKCLDCPANMCKRKILTEYLAERAQEEVEFERVFYVGDGANDFCPSVTLTSADIAFPRKGYPMHRMTQEMENKQPGAFQATVVPWESATEVTRYLQEVLKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(86545..86589,87450..88208)
location: region:86545-88208:1
so has part: feature:86545-86589:1:exon
so has part: feature:87450-88208:1:exon

XP_040392995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86545-86589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87450-88208:1:exon

ABI3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(90017..95720)
location: region:90017-95720:-1
so has part: feature:90017-95720:-1:exon
subclass of: SO_0000010

121059848
type: Gene
SIO_000068: ncbigene

position:90017:-1
position: 90017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95720:-1
position: 95720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90017-95720:-1:exon

ABI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ABI3
product: ABI family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040537017.1
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(90017..90960,91187..91353,91438..91620,92035..92130,92391..92473,93182..93358,94259..94426,95370..95720))
location: region:90017-95720:-1
so has part: feature:95370-95720:-1:exon
so has part: feature:94259-94426:-1:exon
so has part: feature:93182-93358:-1:exon
so has part: feature:92391-92473:-1:exon
so has part: feature:92035-92130:-1:exon
so has part: feature:91438-91620:-1:exon
so has part: feature:91187-91353:-1:exon
so has part: feature:90017-90960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95370-95720:-1:exon

position:95370:-1
position: 95370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94259-94426:-1:exon

position:94259:-1
position: 94259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94426:-1
position: 94426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93182-93358:-1:exon

position:93182:-1
position: 93182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93358:-1
position: 93358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92391-92473:-1:exon

position:92391:-1
position: 92391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92473:-1
position: 92473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92035-92130:-1:exon

position:92035:-1
position: 92035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92130:-1
position: 92130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91438-91620:-1:exon

position:91438:-1
position: 91438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91620:-1
position: 91620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91187-91353:-1:exon

position:91187:-1
position: 91187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91353:-1
position: 91353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:90017-90960:-1:exon

position:90960:-1
position: 90960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ABI gene family member 3
translation: MPEVGAGISRDPQALRQRRCELQNPVPRRLGRKWALEPGTMSELQQLQQCDIPAARQVLRDNHCNLHRVADYCESNYVQASDKQKALEETMAFSTQSLASVAYQVSSLATTFLQLLDLQVAELQKVEANISCVAQRIDMHKEKVSRREIGSLTISKRFPAHQKIISPPGPPCLEPYYRKPLNFSILDDIGHGIKDHSTQLSRTGTLARKGVKSATQSAGTLGRSTRVPEPIQPPVVPPGKLSTASSTSSLTSVSSTGALGDTGEGIPAAPPLPSLPGPPPLVAATVLPPLPLPTDLPPPTAGGLGLALTGHHPPSPFSPIAFLGGGFAVSDNLKPPLLPPPALPDFEDFTPPLPPDVEEPPWVPASYLEKVVTLYPYAQQKDNELSFQPGALIYVTRRYSDGWCEGIMGEEVGFFPGNYVEPF
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(90800..90960,91187..91353,91438..91620,92035..92130,92391..92473,93182..93358,94259..94426,95370..95606))
location: region:90800-95606:-1
so has part: feature:95370-95606:-1:exon
so has part: feature:94259-94426:-1:exon
so has part: feature:93182-93358:-1:exon
so has part: feature:92391-92473:-1:exon
so has part: feature:92035-92130:-1:exon
so has part: feature:91438-91620:-1:exon
so has part: feature:91187-91353:-1:exon
so has part: feature:90800-90960:-1:exon

XP_040392951.1
type: Protein
SIO_000068: ncbiprotein

position:90800:-1
position: 90800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95606:-1
position: 95606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95370-95606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94259-94426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93182-93358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92391-92473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92035-92130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91438-91620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91187-91353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90800-90960:-1:exon

GNGT2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96351..99655
location: region:96351-99655:1
so has part: feature:96351-99655:1:exon
subclass of: SO_0000010

121059879
type: Gene
SIO_000068: ncbigene

position:96351:1
position: 96351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99655:1
position: 99655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96351-99655:1:exon

GNGT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GNGT2
product: G protein subunit gamma transducin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040537064.1
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(96351..97338,97954..98043,98431..99655)
location: region:96351-99655:1
so has part: feature:96351-97338:1:exon
so has part: feature:97954-98043:1:exon
so has part: feature:98431-99655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96351-97338:1:exon

position:97338:1
position: 97338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97954-98043:1:exon

position:97954:1
position: 97954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98043:1
position: 98043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98431-99655:1:exon

position:98431:1
position: 98431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNGT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2
translation: MAQDMTEKELLKMELDQLKKEVKNERQMVSKTGKEIKEYIESMAGEDPLLKGVPEDKNPFKEKGGCTIS
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(97960..98043,98431..98556)
location: region:97960-98556:1
so has part: feature:97960-98043:1:exon
so has part: feature:98431-98556:1:exon

XP_040392998.1
type: Protein
SIO_000068: ncbiprotein

position:97960:1
position: 97960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98556:1
position: 98556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97960-98043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98431-98556:1:exon

TRNAQ-UUG
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TRNAQ-UUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(100947..101018)
location: region:100947-101018:-1
so has part: feature:100947-101018:-1:exon
subclass of: SO_0000663

121059944
type: Gene
SIO_000068: ncbigene

position:100947:-1
position: 100947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101018:-1
position: 101018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100947-101018:-1:exon

TRNAQ-UUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 8869
gene: TRNAQ-UUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(100983..100985),aa:Gln,seq:ttg)
SIO_010081: TRNAQ-UUG
subclass of: SO_0000673
so part of: TRNAQ-UUG
location: complement(100947..101018)
location: region:100947-101018:-1
so has part: feature:100947-101018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100947-101018:-1:exon

IGF2BP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110516..141964)
location: region:110516-141964:-1
so has part: feature:110516-141964:-1:exon
subclass of: SO_0000010

121059875
type: Gene
SIO_000068: ncbigene

position:110516:-1
position: 110516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141964:-1
position: 141964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110516-141964:-1:exon

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537049.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(110516..110739,111333..111446,111632..111763,112113..112187,112386..112502,112813..112935,113066..113201,113713..113835,114075..114209,114938..115219,116975..117038,118266..118317,118838..118886,139182..139242,140281..140883,141881..141964))
location: region:110516-141964:-1
so has part: feature:141881-141964:-1:exon
so has part: feature:140281-140883:-1:exon
so has part: feature:139182-139242:-1:exon
so has part: feature:118838-118886:-1:exon
so has part: feature:118266-118317:-1:exon
so has part: feature:116975-117038:-1:exon
so has part: feature:114938-115219:-1:exon
so has part: feature:114075-114209:-1:exon
so has part: feature:113713-113835:-1:exon
so has part: feature:113066-113201:-1:exon
so has part: feature:112813-112935:-1:exon
so has part: feature:112386-112502:-1:exon
so has part: feature:112113-112187:-1:exon
so has part: feature:111632-111763:-1:exon
so has part: feature:111333-111446:-1:exon
so has part: feature:110516-110739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141881-141964:-1:exon

position:141881:-1
position: 141881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140281-140883:-1:exon

position:140281:-1
position: 140281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140883:-1
position: 140883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139182-139242:-1:exon

position:139182:-1
position: 139182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139242:-1
position: 139242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118838-118886:-1:exon

position:118838:-1
position: 118838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118886:-1
position: 118886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:118266-118317:-1:exon

position:118266:-1
position: 118266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118317:-1
position: 118317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:116975-117038:-1:exon

position:116975:-1
position: 116975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117038:-1
position: 117038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:114938-115219:-1:exon

position:114938:-1
position: 114938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115219:-1
position: 115219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:114075-114209:-1:exon

position:114075:-1
position: 114075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114209:-1
position: 114209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:113713-113835:-1:exon

position:113713:-1
position: 113713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113835:-1
position: 113835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:113066-113201:-1:exon

position:113066:-1
position: 113066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113201:-1
position: 113201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:112813-112935:-1:exon

position:112813:-1
position: 112813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112935:-1
position: 112935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:112386-112502:-1:exon

position:112386:-1
position: 112386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112502:-1
position: 112502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:112113-112187:-1:exon

position:112113:-1
position: 112113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112187:-1
position: 112187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:111632-111763:-1:exon

position:111632:-1
position: 111632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111763:-1
position: 111763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:111333-111446:-1:exon

position:111333:-1
position: 111333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111446:-1
position: 111446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:110516-110739:-1:exon

position:110739:-1
position: 110739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1
translation: MNKLYIGNLNENVTPADLEKVFNDHKISFSGQFLVKSGYAFVDCPDEQWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSETAVVNVTYANREQTRQAIMKLNGHQLENHALKVSYIPDEQSMQGPENGRRGGFGARGAPRQGSPVTAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGATPYSSFVPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASSAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSGQLQARRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(110647..110739,111333..111446,111632..111763,112113..112187,112386..112502,112813..112935,113066..113201,113713..113835,114075..114209,114938..115219,116975..117038,118266..118317,118838..118886,139182..139242,140281..140455))
location: region:110647-140455:-1
so has part: feature:140281-140455:-1:exon
so has part: feature:139182-139242:-1:exon
so has part: feature:118838-118886:-1:exon
so has part: feature:118266-118317:-1:exon
so has part: feature:116975-117038:-1:exon
so has part: feature:114938-115219:-1:exon
so has part: feature:114075-114209:-1:exon
so has part: feature:113713-113835:-1:exon
so has part: feature:113066-113201:-1:exon
so has part: feature:112813-112935:-1:exon
so has part: feature:112386-112502:-1:exon
so has part: feature:112113-112187:-1:exon
so has part: feature:111632-111763:-1:exon
so has part: feature:111333-111446:-1:exon
so has part: feature:110647-110739:-1:exon

XP_040392983.1
type: Protein
SIO_000068: ncbiprotein

position:110647:-1
position: 110647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140455:-1
position: 140455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140281-140455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139182-139242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118838-118886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118266-118317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:116975-117038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114938-115219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114075-114209:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113713-113835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113066-113201:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112813-112935:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112386-112502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:112113-112187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111632-111763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111333-111446:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110647-110739:-1:exon

LOC121059484
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 150411..159185
location: region:150411-159185:1
so has part: feature:150411-159185:1:exon
subclass of: SO_0000010

121059484
type: Gene
SIO_000068: ncbigene

position:150411:1
position: 150411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159185:1
position: 159185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150411-159185:1:exon

LOC121059484
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059484
product: gastric inhibitory polypeptide, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040536365.1
SIO_010081: LOC121059484
subclass of: SO_0000673
so part of: LOC121059484
location: join(150411..151114,153185..153312,154374..154520,154868..154999,157844..157936,158962..159185)
location: region:150411-159185:1
so has part: feature:150411-151114:1:exon
so has part: feature:153185-153312:1:exon
so has part: feature:154374-154520:1:exon
so has part: feature:154868-154999:1:exon
so has part: feature:157844-157936:1:exon
so has part: feature:158962-159185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150411-151114:1:exon

position:151114:1
position: 151114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153185-153312:1:exon

position:153185:1
position: 153185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153312:1
position: 153312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154374-154520:1:exon

position:154374:1
position: 154374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154520:1
position: 154520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:154868-154999:1:exon

position:154868:1
position: 154868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154999:1
position: 154999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157844-157936:1:exon

position:157844:1
position: 157844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157936:1
position: 157936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:158962-159185:1:exon

position:158962:1
position: 158962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121059484
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059484
product: gastric inhibitory polypeptide, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040536364.1
SIO_010081: LOC121059484
subclass of: SO_0000673
so part of: LOC121059484
location: join(150411..150615,150929..151114,153185..153312,154374..154520,154868..154999,157844..157936,158962..159185)
location: region:150411-159185:1
so has part: feature:150411-150615:1:exon
so has part: feature:150929-151114:1:exon
so has part: feature:153185-153312:1:exon
so has part: feature:154374-154520:1:exon
so has part: feature:154868-154999:1:exon
so has part: feature:157844-157936:1:exon
so has part: feature:158962-159185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150411-150615:1:exon

position:150615:1
position: 150615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150929-151114:1:exon

position:150929:1
position: 150929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153185-153312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154374-154520:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154868-154999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157844-157936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158962-159185:1:exon

LOC121059484
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059484
product: gastric inhibitory polypeptide, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040536366.1
SIO_010081: LOC121059484
subclass of: SO_0000673
so part of: LOC121059484
location: join(150416..150615,150929..151114,153185..153312,154374..154520,154868..154999,157081..159185)
location: region:150416-159185:1
so has part: feature:150416-150615:1:exon
so has part: feature:150929-151114:1:exon
so has part: feature:153185-153312:1:exon
so has part: feature:154374-154520:1:exon
so has part: feature:154868-154999:1:exon
so has part: feature:157081-159185:1:exon

position:150416:1
position: 150416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150416-150615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150929-151114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153185-153312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154374-154520:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154868-154999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157081-159185:1:exon

position:157081:1
position: 157081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121059484
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide isoform X1
translation: MMSLKVLSLLFASLSFVLMEENVSGISIRTPSARPVQKRYSEATLASDYSRTMDNMLKKNFVEWLLARREKKSDNVIETYKREAEPQVSAVNGQSLDLRNHEAKDFFAWLLKNKKNQSFTSLEGSEDLKDVLNQEFLTWLMSIDLCRPTTV
SIO_010081: LOC121059484
subclass of: SO_0000673
so part of: LOC121059484
location: join(153239..153312,154374..154520,154868..154999,157844..157936,158962..158971)
location: region:153239-158971:1
so has part: feature:153239-153312:1:exon
so has part: feature:154374-154520:1:exon
so has part: feature:154868-154999:1:exon
so has part: feature:157844-157936:1:exon
so has part: feature:158962-158971:1:exon

XP_040392298.1
type: Protein
SIO_000068: ncbiprotein

position:153239:1
position: 153239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158971:1
position: 158971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153239-153312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154374-154520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154868-154999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157844-157936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158962-158971:1:exon

LOC121059484
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide isoform X1
translation: MMSLKVLSLLFASLSFVLMEENVSGISIRTPSARPVQKRYSEATLASDYSRTMDNMLKKNFVEWLLARREKKSDNVIETYKREAEPQVSAVNGQSLDLRNHEAKDFFAWLLKNKKNQSFTSLEGSEDLKDVLNQEFLTWLMSIDLCRPTTV
SIO_010081: LOC121059484
subclass of: SO_0000673
so part of: LOC121059484
location: join(153239..153312,154374..154520,154868..154999,157844..157936,158962..158971)
location: region:153239-158971:1
so has part: feature:153239-153312:1:exon
so has part: feature:154374-154520:1:exon
so has part: feature:154868-154999:1:exon
so has part: feature:157844-157936:1:exon
so has part: feature:158962-158971:1:exon

XP_040392299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153239-153312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154374-154520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154868-154999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157844-157936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158962-158971:1:exon

LOC121059484
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide isoform X2
translation: MMSLKVLSLLFASLSFVLMEENVSGISIRTPSARPVQKRYSEATLASDYSRTMDNMLKKNFVEWLLARREKKSDNVIETYKREAEPQVSAVNGQSLDLRNHEAKDFFAWLLKNKKNQRTEKQLLRA
SIO_010081: LOC121059484
subclass of: SO_0000673
so part of: LOC121059484
location: join(153239..153312,154374..154520,154868..154999,157081..157108)
location: region:153239-157108:1
so has part: feature:153239-153312:1:exon
so has part: feature:154374-154520:1:exon
so has part: feature:154868-154999:1:exon
so has part: feature:157081-157108:1:exon

XP_040392300.1
type: Protein
SIO_000068: ncbiprotein

position:157108:1
position: 157108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153239-153312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154374-154520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154868-154999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157081-157108:1:exon

SNF8
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 159650..164424
location: region:159650-164424:1
so has part: feature:159650-164424:1:exon
subclass of: SO_0000010

121059483
type: Gene
SIO_000068: ncbigene

position:159650:1
position: 159650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164424:1
position: 164424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159650-164424:1:exon

SNF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SNF8
product: SNF8 subunit of ESCRT-II, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040536362.1
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(159650..159769,159994..160081,160980..161084,162650..162722,163321..163462,163685..163759,164184..164424)
location: region:159650-164424:1
so has part: feature:159650-159769:1:exon
so has part: feature:159994-160081:1:exon
so has part: feature:160980-161084:1:exon
so has part: feature:162650-162722:1:exon
so has part: feature:163321-163462:1:exon
so has part: feature:163685-163759:1:exon
so has part: feature:164184-164424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159650-159769:1:exon

position:159769:1
position: 159769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159994-160081:1:exon

position:159994:1
position: 159994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160081:1
position: 160081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160980-161084:1:exon

position:160980:1
position: 160980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161084:1
position: 161084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:162650-162722:1:exon

position:162650:1
position: 162650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162722:1
position: 162722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:163321-163462:1:exon

position:163321:1
position: 163321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163462:1
position: 163462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:163685-163759:1:exon

position:163685:1
position: 163685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163759:1
position: 163759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164184-164424:1:exon

position:164184:1
position: 164184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SNF8
product: SNF8 subunit of ESCRT-II, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536361.1
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(159650..159769,159994..160044,160509..160647,160980..161084,162650..162722,163321..163462,163685..163759,164184..164424)
location: region:159650-164424:1
so has part: feature:159650-159769:1:exon
so has part: feature:159994-160044:1:exon
so has part: feature:160509-160647:1:exon
so has part: feature:160980-161084:1:exon
so has part: feature:162650-162722:1:exon
so has part: feature:163321-163462:1:exon
so has part: feature:163685-163759:1:exon
so has part: feature:164184-164424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159650-159769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159994-160044:1:exon

position:160044:1
position: 160044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160509-160647:1:exon

position:160509:1
position: 160509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160647:1
position: 160647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160980-161084:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162650-162722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163321-163462:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:163685-163759:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164184-164424:1:exon

SNF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting protein SNF8 isoform X2
translation: MHRRGVGAGAVAKKKLAEAKYKERGTVLAEDQLAQVGDPPCRGVTCGAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQEVSQDDLLRAIKKLKVLGNGFGIIPVGGTYLVQSVPAELNMDHTVVLQLAEKKGYVTVNEIRSSLKWEMERAKQILEHLLKEGMAWLDTQAAGEPQYWLPALFTELYSQEITPEEAKEAIP
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(159716..159769,159994..160081,160980..161084,162650..162722,163321..163462,163685..163759,164184..164321)
location: region:159716-164321:1
so has part: feature:159716-159769:1:exon
so has part: feature:159994-160081:1:exon
so has part: feature:160980-161084:1:exon
so has part: feature:162650-162722:1:exon
so has part: feature:163321-163462:1:exon
so has part: feature:163685-163759:1:exon
so has part: feature:164184-164321:1:exon

XP_040392296.1
type: Protein
SIO_000068: ncbiprotein

position:159716:1
position: 159716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164321:1
position: 164321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159716-159769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159994-160081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160980-161084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162650-162722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163321-163462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163685-163759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164184-164321:1:exon

SNF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting protein SNF8 isoform X1
translation: MHRRGVGAGAVAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKSPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQEVSQDDLLRAIKKLKVLGNGFGIIPVGGTYLVQSVPAELNMDHTVVLQLAEKKGYVTVNEIRSSLKWEMERAKQILEHLLKEGMAWLDTQAAGEPQYWLPALFTELYSQEITPEEAKEAIP
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(159716..159769,159994..160044,160509..160647,160980..161084,162650..162722,163321..163462,163685..163759,164184..164321)
location: region:159716-164321:1
so has part: feature:159716-159769:1:exon
so has part: feature:159994-160044:1:exon
so has part: feature:160509-160647:1:exon
so has part: feature:160980-161084:1:exon
so has part: feature:162650-162722:1:exon
so has part: feature:163321-163462:1:exon
so has part: feature:163685-163759:1:exon
so has part: feature:164184-164321:1:exon

XP_040392295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159716-159769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159994-160044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160509-160647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160980-161084:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162650-162722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163321-163462:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:163685-163759:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164184-164321:1:exon

SNF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SNF8
product: SNF8 subunit of ESCRT-II, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536363.1
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(159996..160081,160509..160647,160980..161084,162650..162722,163321..163462,163685..163759,164184..164424)
location: region:159996-164424:1
so has part: feature:159996-160081:1:exon
so has part: feature:160509-160647:1:exon
so has part: feature:160980-161084:1:exon
so has part: feature:162650-162722:1:exon
so has part: feature:163321-163462:1:exon
so has part: feature:163685-163759:1:exon
so has part: feature:164184-164424:1:exon

position:159996:1
position: 159996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159996-160081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160509-160647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160980-161084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:162650-162722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163321-163462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163685-163759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164184-164424:1:exon

SNF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting protein SNF8 isoform X3
translation: MSKQLDMFKTNLEEFASKHKQEIRKSPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQEVSQDDLLRAIKKLKVLGNGFGIIPVGGTYLVQSVPAELNMDHTVVLQLAEKKGYVTVNEIRSSLKWEMERAKQILEHLLKEGMAWLDTQAAGEPQYWLPALFTELYSQEITPEEAKEAIP
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: join(160509..160647,160980..161084,162650..162722,163321..163462,163685..163759,164184..164321)
location: region:160509-164321:1
so has part: feature:160509-160647:1:exon
so has part: feature:160980-161084:1:exon
so has part: feature:162650-162722:1:exon
so has part: feature:163321-163462:1:exon
so has part: feature:163685-163759:1:exon
so has part: feature:164184-164321:1:exon

XP_040392297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160509-160647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160980-161084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162650-162722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163321-163462:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163685-163759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164184-164321:1:exon

UBE2Z
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(164710..177954)
location: region:164710-177954:-1
so has part: feature:164710-177954:-1:exon
subclass of: SO_0000010

121059482
type: Gene
SIO_000068: ncbigene

position:164710:-1
position: 164710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177954:-1
position: 177954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164710-177954:-1:exon

UBE2Z
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: UBE2Z
product: ubiquitin conjugating enzyme E2 Z
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536360.1
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: complement(join(164710..167232,170283..170373,170902..171014,171621..171732,173606..173793,175609..175681,177411..177954))
location: region:164710-177954:-1
so has part: feature:177411-177954:-1:exon
so has part: feature:175609-175681:-1:exon
so has part: feature:173606-173793:-1:exon
so has part: feature:171621-171732:-1:exon
so has part: feature:170902-171014:-1:exon
so has part: feature:170283-170373:-1:exon
so has part: feature:164710-167232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177411-177954:-1:exon

position:177411:-1
position: 177411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175609-175681:-1:exon

position:175609:-1
position: 175609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175681:-1
position: 175681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173606-173793:-1:exon

position:173606:-1
position: 173606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173793:-1
position: 173793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171621-171732:-1:exon

position:171621:-1
position: 171621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171732:-1
position: 171732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170902-171014:-1:exon

position:170902:-1
position: 170902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171014:-1
position: 171014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170283-170373:-1:exon

position:170283:-1
position: 170283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170373:-1
position: 170373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164710-167232:-1:exon

position:167232:-1
position: 167232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE2Z
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Z
translation: MAESPAAEEAAPAPAAVLAAGGGSGTSAGPGPGGGAGSPGVFIPAELWAAAGFGAAPASAGVAPGSGGAPIAAAAAAAGAALLTHSAFWDPTVSGDWDSERPSPACLLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNYNECIRHETIRVAVCDMLEGKCPCPEPLRGVMEKSFMEYYDFYEGVCKERLYLQGQTMQDPFGEKRGHFDYQSLLVRLQGIRQKVQEKHQQENTEIDSESSSSETETDTQSCSKA
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: complement(join(167062..167232,170283..170373,170902..171014,171621..171732,173606..173793,175609..175681,177411..177745))
location: region:167062-177745:-1
so has part: feature:177411-177745:-1:exon
so has part: feature:175609-175681:-1:exon
so has part: feature:173606-173793:-1:exon
so has part: feature:171621-171732:-1:exon
so has part: feature:170902-171014:-1:exon
so has part: feature:170283-170373:-1:exon
so has part: feature:167062-167232:-1:exon

XP_040392294.1
type: Protein
SIO_000068: ncbiprotein

position:167062:-1
position: 167062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177745:-1
position: 177745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177411-177745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175609-175681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173606-173793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171621-171732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170902-171014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170283-170373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167062-167232:-1:exon

ATP5MC1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(180017..182291)
location: region:180017-182291:-1
so has part: feature:180017-182291:-1:exon
subclass of: SO_0000010

121059486
type: Gene
SIO_000068: ncbigene

position:180017:-1
position: 180017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182291:-1
position: 182291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180017-182291:-1:exon

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536368.1
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(180017..180233,180552..180727,181004..181081,181669..181717,182182..182291))
location: region:180017-182291:-1
so has part: feature:182182-182291:-1:exon
so has part: feature:181669-181717:-1:exon
so has part: feature:181004-181081:-1:exon
so has part: feature:180552-180727:-1:exon
so has part: feature:180017-180233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182182-182291:-1:exon

position:182182:-1
position: 182182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181669-181717:-1:exon

position:181669:-1
position: 181669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181717:-1
position: 181717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181004-181081:-1:exon

position:181004:-1
position: 181004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181081:-1
position: 181081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180552-180727:-1:exon

position:180552:-1
position: 180552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180727:-1
position: 180727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180017-180233:-1:exon

position:180233:-1
position: 180233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536367.1
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(180017..180233,180552..180727,181004..181081,181669..181717,182124..182224))
location: region:180017-182224:-1
so has part: feature:182124-182224:-1:exon
so has part: feature:181669-181717:-1:exon
so has part: feature:181004-181081:-1:exon
so has part: feature:180552-180727:-1:exon
so has part: feature:180017-180233:-1:exon

position:182224:-1
position: 182224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182124-182224:-1:exon

position:182124:-1
position: 182124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181669-181717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181004-181081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180552-180727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180017-180233:-1:exon

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040536369.1
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(180017..180233,180552..180727,181004..181081,181669..181717,181921..182103))
location: region:180017-182103:-1
so has part: feature:181921-182103:-1:exon
so has part: feature:181669-181717:-1:exon
so has part: feature:181004-181081:-1:exon
so has part: feature:180552-180727:-1:exon
so has part: feature:180017-180233:-1:exon

position:182103:-1
position: 182103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181921-182103:-1:exon

position:181921:-1
position: 181921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181669-181717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181004-181081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180552-180727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180017-180233:-1:exon

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial
translation: MQTPVALLSSPALFRCCSRALARPVPVSVFSRPETQTVQPAGVSYPQLSRREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(180119..180233,180552..180727,181004..181081,181669..181707))
location: region:180119-181707:-1
so has part: feature:181669-181707:-1:exon
so has part: feature:181004-181081:-1:exon
so has part: feature:180552-180727:-1:exon
so has part: feature:180119-180233:-1:exon

XP_040392301.1
type: Protein
SIO_000068: ncbiprotein

position:180119:-1
position: 180119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181707:-1
position: 181707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181669-181707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181004-181081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180552-180727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180119-180233:-1:exon

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial
translation: MQTPVALLSSPALFRCCSRALARPVPVSVFSRPETQTVQPAGVSYPQLSRREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(180119..180233,180552..180727,181004..181081,181669..181707))
location: region:180119-181707:-1
so has part: feature:181669-181707:-1:exon
so has part: feature:181004-181081:-1:exon
so has part: feature:180552-180727:-1:exon
so has part: feature:180119-180233:-1:exon

XP_040392302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181669-181707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181004-181081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180552-180727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180119-180233:-1:exon

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial
translation: MQTPVALLSSPALFRCCSRALARPVPVSVFSRPETQTVQPAGVSYPQLSRREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: complement(join(180119..180233,180552..180727,181004..181081,181669..181707))
location: region:180119-181707:-1
so has part: feature:181669-181707:-1:exon
so has part: feature:181004-181081:-1:exon
so has part: feature:180552-180727:-1:exon
so has part: feature:180119-180233:-1:exon

XP_040392303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181669-181707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181004-181081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180552-180727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180119-180233:-1:exon

CALCOCO2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182377..195108
location: region:182377-195108:1
so has part: feature:182377-195108:1:exon
subclass of: SO_0000010

121059480
type: Gene
SIO_000068: ncbigene

position:182377:1
position: 182377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195108:1
position: 195108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182377-195108:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536357.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(182377..182488,183824..183940,185843..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..195108)
location: region:182377-195108:1
so has part: feature:182377-182488:1:exon
so has part: feature:183824-183940:1:exon
so has part: feature:185843-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-195108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182377-182488:1:exon

position:182488:1
position: 182488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183824-183940:1:exon

position:183824:1
position: 183824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183940:1
position: 183940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185843-186031:1:exon

position:185843:1
position: 185843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186031:1
position: 186031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186556-186658:1:exon

position:186556:1
position: 186556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186658:1
position: 186658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187025-187158:1:exon

position:187025:1
position: 187025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187158:1
position: 187158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:187888-188013:1:exon

position:187888:1
position: 187888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188013:1
position: 188013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:188515-188642:1:exon

position:188515:1
position: 188515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188642:1
position: 188642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:188754-188844:1:exon

position:188754:1
position: 188754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188844:1
position: 188844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:189640-189762:1:exon

position:189640:1
position: 189640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189762:1
position: 189762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:190513-190599:1:exon

position:190513:1
position: 190513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190599:1
position: 190599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:191638-191733:1:exon

position:191638:1
position: 191638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191733:1
position: 191733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:192413-192554:1:exon

position:192413:1
position: 192413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192554:1
position: 192554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:192955-192992:1:exon

position:192955:1
position: 192955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192992:1
position: 192992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:193536-195108:1:exon

position:193536:1
position: 193536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040536359.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(182389..182488,185843..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..195108)
location: region:182389-195108:1
so has part: feature:182389-182488:1:exon
so has part: feature:185843-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-195108:1:exon

position:182389:1
position: 182389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182389-182488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185843-186031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193536-195108:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536358.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(182848..183041,183824..183940,185843..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..195108)
location: region:182848-195108:1
so has part: feature:182848-183041:1:exon
so has part: feature:183824-183940:1:exon
so has part: feature:185843-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-195108:1:exon

position:182848:1
position: 182848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182848-183041:1:exon

position:183041:1
position: 183041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183824-183940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185843-186031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193536-195108:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 175 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536351.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(182849..183041,185843..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..195108)
location: region:182849-195108:1
so has part: feature:182849-183041:1:exon
so has part: feature:185843-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-195108:1:exon

position:182849:1
position: 182849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182849-183041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185843-186031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193536-195108:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536352.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(183058..184615,185843..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..195108)
location: region:183058-195108:1
so has part: feature:183058-184615:1:exon
so has part: feature:185843-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-195108:1:exon

position:183058:1
position: 183058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183058-184615:1:exon

position:184615:1
position: 184615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185843-186031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193536-195108:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040536353.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(183058..184067,185843..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..195108)
location: region:183058-195108:1
so has part: feature:183058-184067:1:exon
so has part: feature:185843-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-195108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183058-184067:1:exon

position:184067:1
position: 184067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185843-186031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193536-195108:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040536354.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(183058..183940,185843..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..195108)
location: region:183058-195108:1
so has part: feature:183058-183940:1:exon
so has part: feature:185843-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-195108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183058-183940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185843-186031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193536-195108:1:exon

CALCOCO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CALCOCO2
product: calcium binding and coiled-coil domain 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536355.1
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(183058..183584,185843..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..195108)
location: region:183058-195108:1
so has part: feature:183058-183584:1:exon
so has part: feature:185843-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-195108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183058-183584:1:exon

position:183584:1
position: 183584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185843-186031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193536-195108:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPGDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQNGVVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQELQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNMTSEKVCLETRLKTALDHMDQLQSQELNYEKEMENLVRMDHDKTEQLESLKEENSQLCMTITQQKEQKKELEHHLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRHLFQILQAKKNESDEEKQKLREENDTLLRHLSQARDVSSFSAVSQAQAPVPAPEAGCLVFGNPYYAAEANLESRAARTDSIRKYPMCDDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(185849..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..193712)
location: region:185849-193712:1
so has part: feature:185849-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-193712:1:exon

XP_040392285.1
type: Protein
SIO_000068: ncbiprotein

position:185849:1
position: 185849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193712:1
position: 193712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185849-186031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193536-193712:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPGDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQNGVVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQELQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNMTSEKVCLETRLKTALDHMDQLQSQELNYEKEMENLVRMDHDKTEQLESLKEENSQLCMTITQQKEQKKELEHHLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRHLFQILQAKKNESDEEKQKLREENDTLLRHLSQARDVSSFSAVSQAQAPVPAPEAGCLVFGNPYYAAEANLESRAARTDSIRKYPMCDDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(185849..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..193712)
location: region:185849-193712:1
so has part: feature:185849-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-193712:1:exon

XP_040392286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185849-186031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193536-193712:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPGDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQNGVVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQELQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNMTSEKVCLETRLKTALDHMDQLQSQELNYEKEMENLVRMDHDKTEQLESLKEENSQLCMTITQQKEQKKELEHHLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRHLFQILQAKKNESDEEKQKLREENDTLLRHLSQARDVSSFSAVSQAQAPVPAPEAGCLVFGNPYYAAEANLESRAARTDSIRKYPMCDDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(185849..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..193712)
location: region:185849-193712:1
so has part: feature:185849-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-193712:1:exon

XP_040392287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185849-186031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193536-193712:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPGDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQNGVVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQELQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNMTSEKVCLETRLKTALDHMDQLQSQELNYEKEMENLVRMDHDKTEQLESLKEENSQLCMTITQQKEQKKELEHHLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRHLFQILQAKKNESDEEKQKLREENDTLLRHLSQARDVSSFSAVSQAQAPVPAPEAGCLVFGNPYYAAEANLESRAARTDSIRKYPMCDDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(185849..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..193712)
location: region:185849-193712:1
so has part: feature:185849-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-193712:1:exon

XP_040392288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185849-186031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193536-193712:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPGDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQNGVVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQELQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNMTSEKVCLETRLKTALDHMDQLQSQELNYEKEMENLVRMDHDKTEQLESLKEENSQLCMTITQQKEQKKELEHHLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRHLFQILQAKKNESDEEKQKLREENDTLLRHLSQARDVSSFSAVSQAQAPVPAPEAGCLVFGNPYYAAEANLESRAARTDSIRKYPMCDDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(185849..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..193712)
location: region:185849-193712:1
so has part: feature:185849-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-193712:1:exon

XP_040392289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185849-186031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193536-193712:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPGDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQNGVVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQELQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNMTSEKVCLETRLKTALDHMDQLQSQELNYEKEMENLVRMDHDKTEQLESLKEENSQLCMTITQQKEQKKELEHHLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRHLFQILQAKKNESDEEKQKLREENDTLLRHLSQARDVSSFSAVSQAQAPVPAPEAGCLVFGNPYYAAEANLESRAARTDSIRKYPMCDDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(185849..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..193712)
location: region:185849-193712:1
so has part: feature:185849-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-193712:1:exon

XP_040392291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185849-186031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193536-193712:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPGDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQNGVVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQELQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNMTSEKVCLETRLKTALDHMDQLQSQELNYEKEMENLVRMDHDKTEQLESLKEENSQLCMTITQQKEQKKELEHHLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRHLFQILQAKKNESDEEKQKLREENDTLLRHLSQARDVSSFSAVSQAQAPVPAPEAGCLVFGNPYYAAEANLESRAARTDSIRKYPMCDDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(185849..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..193712)
location: region:185849-193712:1
so has part: feature:185849-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-193712:1:exon

XP_040392292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185849-186031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193536-193712:1:exon

CALCOCO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CALCOCO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding and coiled-coil domain-containing protein 2
translation: MMDETSDEPPTSAVLLDNCHFSQVIFNNVEKFYVPGGDVICYYTLTHNIVPRGKDWVGIFRVGWKTTREYYTFMWAPLPGDVHGDTAVQQQIQFKAYYLPKDDEYYQFCYIDQNGVVRGASVPFQFRAETEDDILVVTTQGEVEEIELQNKNLLKENEELQATCASLQKQNTELQEELKKTQELQNGLESLRSSTEKLELELNSLKKENKHLKELDECREAELHQFKEQIQNMTSEKVCLETRLKTALDHMDQLQSQELNYEKEMENLVRMDHDKTEQLESLKEENSQLCMTITQQKEQKKELEHHLENLKGTEANLSLRLQNEQQQNRDLMKELEEQRHLFQILQAKKNESDEEKQKLREENDTLLRHLSQARDVSSFSAVSQAQAPVPAPEAGCLVFGNPYYAAEANLESRAARTDSIRKYPMCDDIFPEDIEASDYEAHVQSHLLECPLCNETFEKSNQQVFDDHIFCHGLE
SIO_010081: CALCOCO2
subclass of: SO_0000673
so part of: CALCOCO2
location: join(185849..186031,186556..186658,187025..187158,187888..188013,188515..188642,188754..188844,189640..189762,190513..190599,191638..191733,192413..192554,192955..192992,193536..193712)
location: region:185849-193712:1
so has part: feature:185849-186031:1:exon
so has part: feature:186556-186658:1:exon
so has part: feature:187025-187158:1:exon
so has part: feature:187888-188013:1:exon
so has part: feature:188515-188642:1:exon
so has part: feature:188754-188844:1:exon
so has part: feature:189640-189762:1:exon
so has part: feature:190513-190599:1:exon
so has part: feature:191638-191733:1:exon
so has part: feature:192413-192554:1:exon
so has part: feature:192955-192992:1:exon
so has part: feature:193536-193712:1:exon

XP_040392293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185849-186031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186556-186658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187025-187158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187888-188013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188515-188642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188754-188844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189640-189762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190513-190599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191638-191733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192413-192554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192955-192992:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193536-193712:1:exon

LOC121059487
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189769..202464)
location: region:189769-202464:-1
so has part: feature:189769-202464:-1:exon
subclass of: SO_0000011

121059487
type: Gene
SIO_000068: ncbigene

position:189769:-1
position: 189769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202464:-1
position: 202464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189769-202464:-1:exon

LOC121059487
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059487
product: uncharacterized LOC121059487, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814571.1
SIO_010081: LOC121059487
subclass of: SO_0000673
so part of: LOC121059487
location: complement(join(189769..190504,197318..197544,202345..202464))
location: region:189769-202464:-1
so has part: feature:202345-202464:-1:exon
so has part: feature:197318-197544:-1:exon
so has part: feature:189769-190504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202345-202464:-1:exon

position:202345:-1
position: 202345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197318-197544:-1:exon

position:197318:-1
position: 197318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197544:-1
position: 197544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189769-190504:-1:exon

position:190504:-1
position: 190504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059487
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059487
product: uncharacterized LOC121059487, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814572.1
SIO_010081: LOC121059487
subclass of: SO_0000673
so part of: LOC121059487
location: complement(join(192561..192757,197318..197544,202345..202464))
location: region:192561-202464:-1
so has part: feature:202345-202464:-1:exon
so has part: feature:197318-197544:-1:exon
so has part: feature:192561-192757:-1:exon

position:192561:-1
position: 192561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202345-202464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197318-197544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192561-192757:-1:exon

position:192757:-1
position: 192757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059839
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 202616..217481
location: region:202616-217481:1
so has part: feature:202616-217481:1:exon
subclass of: SO_0000011

121059839
type: Gene
SIO_000068: ncbigene

position:202616:1
position: 202616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217481:1
position: 217481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202616-217481:1:exon

LOC121059839
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059839
product: uncharacterized LOC121059839, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814660.1
SIO_010081: LOC121059839
subclass of: SO_0000673
so part of: LOC121059839
location: join(202616..203986,205046..205199,207269..217481)
location: region:202616-217481:1
so has part: feature:202616-203986:1:exon
so has part: feature:205046-205199:1:exon
so has part: feature:207269-217481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202616-203986:1:exon

position:203986:1
position: 203986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205046-205199:1:exon

position:205046:1
position: 205046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205199:1
position: 205199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207269-217481:1:exon

position:207269:1
position: 207269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121059839
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059839
product: uncharacterized LOC121059839, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814662.1
SIO_010081: LOC121059839
subclass of: SO_0000673
so part of: LOC121059839
location: join(204567..205199,207269..211962,212483..217481)
location: region:204567-217481:1
so has part: feature:204567-205199:1:exon
so has part: feature:207269-211962:1:exon
so has part: feature:212483-217481:1:exon

position:204567:1
position: 204567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204567-205199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207269-211962:1:exon

position:211962:1
position: 211962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212483-217481:1:exon

position:212483:1
position: 212483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121059839
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059839
product: uncharacterized LOC121059839, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005814661.1
SIO_010081: LOC121059839
subclass of: SO_0000673
so part of: LOC121059839
location: join(204567..205199,207269..207346,208684..217481)
location: region:204567-217481:1
so has part: feature:204567-205199:1:exon
so has part: feature:207269-207346:1:exon
so has part: feature:208684-217481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204567-205199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207269-207346:1:exon

position:207346:1
position: 207346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208684-217481:1:exon

position:208684:1
position: 208684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB13
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <227610..229053
location: region:227610-229053:1
so has part: feature:227610-229053:1:exon
subclass of: SO_0000010

121059442
type: Gene
SIO_000068: ncbigene

position:227610:1
position: 227610
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:229053:1
position: 229053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227610-229053:1:exon

HOXB13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB13
product: homeobox B13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_040536316.1
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: join(<227610..228012,228800..229053)
location: region:227610-229053:1
so has part: feature:227610-228012:1:exon
so has part: feature:228800-229053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227610-228012:1:exon

position:228012:1
position: 228012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228800-229053:1:exon

position:228800:1
position: 228800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B13
translation: PPGPAASAPLPYGYFGSGYYSCRVARSALKTGPAQGPFTPEKYLDPPASSEDFQSRPAEFAFYPSYGAPYQPVAGYLDVSVVPGLGGPGEARHETLLPVDGYHQPWALGGSWSGQMCCPKEQGQAGYLLKSAFADATTQLPSDGCSFRRGRKKRVPYSKGQLKELEKEYASSKFITRDKRRKISAATNLTERQITIWFQNRRVKEKKVVAKIKSSSTP
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: join(<227610..228012,228800..229053)
location: region:227610-229053:1
so has part: feature:227610-228012:1:exon
so has part: feature:228800-229053:1:exon

XP_040392250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227610-228012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228800-229053:1:exon

LOC121059850
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 253515..265650
location: region:253515-265650:1
so has part: feature:253515-265650:1:exon
subclass of: SO_0000011

121059850
type: Gene
SIO_000068: ncbigene

position:253515:1
position: 253515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265650:1
position: 265650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253515-265650:1:exon

LOC121059850
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059850
product: uncharacterized LOC121059850
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814664.1
SIO_010081: LOC121059850
subclass of: SO_0000673
so part of: LOC121059850
location: join(253515..254211,255370..255534,256214..259839,264039..264091,265631..265650)
location: region:253515-265650:1
so has part: feature:253515-254211:1:exon
so has part: feature:255370-255534:1:exon
so has part: feature:256214-259839:1:exon
so has part: feature:264039-264091:1:exon
so has part: feature:265631-265650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253515-254211:1:exon

position:254211:1
position: 254211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255370-255534:1:exon

position:255370:1
position: 255370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255534:1
position: 255534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256214-259839:1:exon

position:256214:1
position: 256214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259839:1
position: 259839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264039-264091:1:exon

position:264039:1
position: 264039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264091:1
position: 264091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265631-265650:1:exon

position:265631:1
position: 265631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB9
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 269084..276330
location: region:269084-276330:1
so has part: feature:269084-276330:1:exon
subclass of: SO_0000010

121059849
type: Gene
SIO_000068: ncbigene

position:269084:1
position: 269084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276330:1
position: 276330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269084-276330:1:exon

HOXB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB9
product: homeobox B9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040537018.1
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: join(269084..269714,273185..276330)
location: region:269084-276330:1
so has part: feature:269084-269714:1:exon
so has part: feature:273185-276330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269084-269714:1:exon

position:269714:1
position: 269714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273185-276330:1:exon

position:273185:1
position: 273185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B9
translation: MSISGTLSNYYVDSIISHESEDSPSAKFSSGQYTSSRQAGHNEHLEFPSCSFQPKPPVFSASWTPLNPHSSGTLPAVYHPYIQHQSVPSDSRYLRSWLDPVPRAENLPGQGSVKAEPLLGRPGDVHKQGTQEYNLETSAGREGIVSNQRPSFEDNKVCEGSEDKDRTDQTNPAASWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: join(269207..269714,273185..273420)
location: region:269207-273420:1
so has part: feature:269207-269714:1:exon
so has part: feature:273185-273420:1:exon

XP_040392952.1
type: Protein
SIO_000068: ncbiprotein

position:269207:1
position: 269207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273420:1
position: 273420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269207-269714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273185-273420:1:exon

HOXB8
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281643..284683
location: region:281643-284683:1
so has part: feature:281643-284683:1:exon
subclass of: SO_0000010

121059558
type: Gene
SIO_000068: ncbigene

position:281643:1
position: 281643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284683:1
position: 284683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281643-284683:1:exon

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB8
product: homeobox B8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040536433.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(281643..282619,283532..284683)
location: region:281643-284683:1
so has part: feature:281643-282619:1:exon
so has part: feature:283532-284683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281643-282619:1:exon

position:282619:1
position: 282619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283532-284683:1:exon

position:283532:1
position: 283532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB8
product: homeobox B8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040536432.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(282199..282619,283529..284683)
location: region:282199-284683:1
so has part: feature:282199-282619:1:exon
so has part: feature:283529-284683:1:exon

position:282199:1
position: 282199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282199-282619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283529-284683:1:exon

position:283529:1
position: 283529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X1
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHGASSLSSSPYQQNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(282199..282619,283529..283836)
location: region:282199-283836:1
so has part: feature:282199-282619:1:exon
so has part: feature:283529-283836:1:exon

XP_040392366.1
type: Protein
SIO_000068: ncbiprotein

position:283836:1
position: 283836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282199-282619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283529-283836:1:exon

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X2
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHGASSLSSSPYQQNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(282199..282619,283532..283836)
location: region:282199-283836:1
so has part: feature:282199-282619:1:exon
so has part: feature:283532-283836:1:exon

XP_040392367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282199-282619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283532-283836:1:exon

HOXB7
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 285872..291064
location: region:285872-291064:1
so has part: feature:285872-291064:1:exon
subclass of: SO_0000010

121059561
type: Gene
SIO_000068: ncbigene

position:285872:1
position: 285872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291064:1
position: 291064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285872-291064:1:exon

HOXB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB7
product: homeobox B7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040536436.1
SIO_010081: HOXB7
subclass of: SO_0000673
so part of: HOXB7
location: join(285872..286836,289979..291064)
location: region:285872-291064:1
so has part: feature:285872-286836:1:exon
so has part: feature:289979-291064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285872-286836:1:exon

position:286836:1
position: 286836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:289979-291064:1:exon

position:289979:1
position: 289979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B7
translation: MSSLYYANALFSKYQAASSVFPSGVFPEQTSCAFASNTQRAGYGAGSTPPFAASMPGLYSSGSAVHPQAPTMYSSGYGLEPSSFNMHCSPFEQNLSMMCPGDASKQNCNKTDQRDSDLQSDSNFRIYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTACSGSGSQEKPDVEDDEEE
SIO_010081: HOXB7
subclass of: SO_0000673
so part of: HOXB7
location: join(286437..286836,289979..290232)
location: region:286437-290232:1
so has part: feature:286437-286836:1:exon
so has part: feature:289979-290232:1:exon

XP_040392370.1
type: Protein
SIO_000068: ncbiprotein

position:286437:1
position: 286437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290232:1
position: 290232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286437-286836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:289979-290232:1:exon

LOC121059562
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(293921..295285)
location: region:293921-295285:-1
so has part: feature:293921-295285:-1:exon
subclass of: SO_0000011

121059562
type: Gene
SIO_000068: ncbigene

position:293921:-1
position: 293921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295285:-1
position: 295285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293921-295285:-1:exon

LOC121059562
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059562
product: uncharacterized LOC121059562
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814577.1
SIO_010081: LOC121059562
subclass of: SO_0000673
so part of: LOC121059562
location: complement(join(293921..294118,294991..295285))
location: region:293921-295285:-1
so has part: feature:294991-295285:-1:exon
so has part: feature:293921-294118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294991-295285:-1:exon

position:294991:-1
position: 294991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293921-294118:-1:exon

position:294118:-1
position: 294118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB6
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300106..302674
location: region:300106-302674:1
so has part: feature:300106-302674:1:exon
subclass of: SO_0000010

121059559
type: Gene
SIO_000068: ncbigene

position:300106:1
position: 300106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302674:1
position: 302674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300106-302674:1:exon

HOXB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB6
product: homeobox B6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040536434.1
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(300106..300864,302118..302674)
location: region:300106-302674:1
so has part: feature:300106-300864:1:exon
so has part: feature:302118-302674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300106-300864:1:exon

position:300864:1
position: 300864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:302118-302674:1:exon

position:302118:1
position: 302118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB6
product: homeobox B6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040536435.1
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(300203..300864,302127..302674)
location: region:300203-302674:1
so has part: feature:300203-300864:1:exon
so has part: feature:302127-302674:1:exon

position:300203:1
position: 300203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300203-300864:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302127-302674:1:exon

position:302127:1
position: 302127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B6 isoform X1
translation: MSSYFVNSTFPVSLAAGQEPFLGQIPLYPSGYADPLRHYPTTYGATGVQEKGYASSPYYQQSNGAYSRSSACDYGAGGFFREKDPACAPSNLEEVPFAPEPRKSDCAQSKTVFGESEEQKCSAPVYPWMQRMNSCNSVAGSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENKLLNSSQLSAEEEEEKTAE
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(300456..300864,302118..302386)
location: region:300456-302386:1
so has part: feature:300456-300864:1:exon
so has part: feature:302118-302386:1:exon

XP_040392368.1
type: Protein
SIO_000068: ncbiprotein

position:300456:1
position: 300456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302386:1
position: 302386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300456-300864:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302118-302386:1:exon

HOXB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B6 isoform X2
translation: MSSYFVNSTFPVSLAAGQEPFLGQIPLYPSGYADPLRHYPTTYGATGVQEKGYASSPYYQQSNGAYSRSSACDYGAGGFFREKDPACAPSNLEEVPFAPEPRKSDCAQSKTVFGESEEQKCSAPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENKLLNSSQLSAEEEEEKTAE
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(300456..300864,302127..302386)
location: region:300456-302386:1
so has part: feature:300456-300864:1:exon
so has part: feature:302127-302386:1:exon

XP_040392369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300456-300864:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302127-302386:1:exon

HOXB5
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304966..307442
location: region:304966-307442:1
so has part: feature:304966-307442:1:exon
subclass of: SO_0000010

121059556
type: Gene
SIO_000068: ncbigene

position:304966:1
position: 304966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307442:1
position: 307442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304966-307442:1:exon

HOXB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB5
product: homeobox B5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536430.1
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: join(304966..305784,306694..307442)
location: region:304966-307442:1
so has part: feature:304966-305784:1:exon
so has part: feature:306694-307442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304966-305784:1:exon

position:305784:1
position: 305784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306694-307442:1:exon

position:306694:1
position: 306694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B5
translation: MSSYFVNSFSGRYPNGPDYQLLNYGTSSSMNGSYRDSSTMHSSSYGYNYNGMDLSINRSASSSHFGAVGESSRGFPSPAQESRFRQASSCSLSSPDSLPCSNSESHGGKPAPSPSDQATSASTNTNFTELDETSASSGADEGTPISSSIPRAQAEPIATSTAATEGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: join(305238..305784,306694..306941)
location: region:305238-306941:1
so has part: feature:305238-305784:1:exon
so has part: feature:306694-306941:1:exon

XP_040392364.1
type: Protein
SIO_000068: ncbiprotein

position:305238:1
position: 305238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306941:1
position: 306941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305238-305784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306694-306941:1:exon

HOXB4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 321664..324143
location: region:321664-324143:1
so has part: feature:321664-324143:1:exon
subclass of: SO_0000010

121059557
type: Gene
SIO_000068: ncbigene

position:321664:1
position: 321664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324143:1
position: 324143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321664-324143:1:exon

HOXB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB4
product: homeobox B4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040536431.1
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: join(321664..322386,323168..324143)
location: region:321664-324143:1
so has part: feature:321664-322386:1:exon
so has part: feature:323168-324143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321664-322386:1:exon

position:322386:1
position: 322386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323168-324143:1:exon

position:323168:1
position: 323168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B4
translation: MAMSSFLINSNYVDPKFPPCEEYSHNDYLPNHSPEYYSSQRRESTFQHEAMYQPRSACNEQLYSSCQSSGHQAAVLSPRGHVHPPAGLQSHPSEPNHPCEPVTPSPPPSCSQNSLNQSPSNSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNPSTSSASLQIPQGGSQGRSSGPATSL
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: join(321966..322386,323168..323484)
location: region:321966-323484:1
so has part: feature:321966-322386:1:exon
so has part: feature:323168-323484:1:exon

XP_040392365.1
type: Protein
SIO_000068: ncbiprotein

position:321966:1
position: 321966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323484:1
position: 323484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321966-322386:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323168-323484:1:exon

HOXB3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 326309..350757
location: region:326309-350757:1
so has part: feature:326309-350757:1:exon
subclass of: SO_0000010

121059555
type: Gene
SIO_000068: ncbigene

position:326309:1
position: 326309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350757:1
position: 350757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326309-350757:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB3
product: homeobox B3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040536426.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(326309..326438,346747..347300,348359..350757)
location: region:326309-350757:1
so has part: feature:326309-326438:1:exon
so has part: feature:346747-347300:1:exon
so has part: feature:348359-350757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326309-326438:1:exon

position:326438:1
position: 326438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346747-347300:1:exon

position:346747:1
position: 346747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347300:1
position: 347300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348359-350757:1:exon

position:348359:1
position: 348359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB3
product: homeobox B3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040536428.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(328950..329912,346747..347300,348359..350757)
location: region:328950-350757:1
so has part: feature:328950-329912:1:exon
so has part: feature:346747-347300:1:exon
so has part: feature:348359-350757:1:exon

position:328950:1
position: 328950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328950-329912:1:exon

position:329912:1
position: 329912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346747-347300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348359-350757:1:exon

LOC121059563
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335338..341457)
location: region:335338-341457:-1
so has part: feature:335338-341457:-1:exon
subclass of: SO_0000011

121059563
type: Gene
SIO_000068: ncbigene

position:335338:-1
position: 335338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341457:-1
position: 341457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335338-341457:-1:exon

LOC121059563
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059563
product: uncharacterized LOC121059563
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814578.1
SIO_010081: LOC121059563
subclass of: SO_0000673
so part of: LOC121059563
location: complement(join(335338..337826,338063..338188,341326..341457))
location: region:335338-341457:-1
so has part: feature:341326-341457:-1:exon
so has part: feature:338063-338188:-1:exon
so has part: feature:335338-337826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341326-341457:-1:exon

position:341326:-1
position: 341326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338063-338188:-1:exon

position:338063:-1
position: 338063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338188:-1
position: 338188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:335338-337826:-1:exon

position:337826:-1
position: 337826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB3
product: homeobox B3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040536424.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(338568..339446,341240..341302,346747..347300,348359..350757)
location: region:338568-350757:1
so has part: feature:338568-339446:1:exon
so has part: feature:341240-341302:1:exon
so has part: feature:346747-347300:1:exon
so has part: feature:348359-350757:1:exon

position:338568:1
position: 338568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338568-339446:1:exon

position:339446:1
position: 339446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341240-341302:1:exon

position:341240:1
position: 341240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341302:1
position: 341302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346747-347300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348359-350757:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB3
product: homeobox B3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040536429.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(340916..341302,346747..347300,348362..350757)
location: region:340916-350757:1
so has part: feature:340916-341302:1:exon
so has part: feature:346747-347300:1:exon
so has part: feature:348362-350757:1:exon

position:340916:1
position: 340916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340916-341302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346747-347300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348362-350757:1:exon

position:348362:1
position: 348362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB3
product: homeobox B3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040536425.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(342839..343649,346747..347300,348359..350757)
location: region:342839-350757:1
so has part: feature:342839-343649:1:exon
so has part: feature:346747-347300:1:exon
so has part: feature:348359-350757:1:exon

position:342839:1
position: 342839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342839-343649:1:exon

position:343649:1
position: 343649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346747-347300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348359-350757:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHAKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSSNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVAYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(346865..347300,348359..349125)
location: region:346865-349125:1
so has part: feature:346865-347300:1:exon
so has part: feature:348359-349125:1:exon

XP_040392358.1
type: Protein
SIO_000068: ncbiprotein

position:346865:1
position: 346865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349125:1
position: 349125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346865-347300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348359-349125:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHAKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSSNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVAYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(346865..347300,348359..349125)
location: region:346865-349125:1
so has part: feature:346865-347300:1:exon
so has part: feature:348359-349125:1:exon

XP_040392359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346865-347300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348359-349125:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHAKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSSNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVAYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(346865..347300,348359..349125)
location: region:346865-349125:1
so has part: feature:346865-347300:1:exon
so has part: feature:348359-349125:1:exon

XP_040392360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346865-347300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348359-349125:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X1
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHAKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSSNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTAETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVAYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(346865..347300,348359..349125)
location: region:346865-349125:1
so has part: feature:346865-347300:1:exon
so has part: feature:348359-349125:1:exon

XP_040392362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346865-347300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348359-349125:1:exon

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3 isoform X2
translation: MQKTTYYDSSTLFGGYSYGSTNGFGYEGPQQPFQPGSHVESDYQRSACSLQSLGNTTPHAKSKDLNGSCMRPSLPQEHHPPPTVSPPPNPATNSTSSNSNNQSGSSKSAPSKANLSANASLTKQIFPWMKESRQNSKQKNTSPSTETCSGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGMGSSSGGPSPTSSPPQPMQSSAGFMNALHTMSSNYDAPSPPSFNKPHQNAYAMPTNYQNPIKGCPSQQKYTNTAPEYDPHVLQGNGVAYGTPSMQGSPVYVGGNYVDSMPTSGPSLYGLNHLPHPQAASMDYSGPPQMPPSQHHGPCETHPTYTDLSTHHASSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(346865..347300,348362..349125)
location: region:346865-349125:1
so has part: feature:346865-347300:1:exon
so has part: feature:348362-349125:1:exon

XP_040392363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346865-347300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348362-349125:1:exon

HOXB2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 354534..358208
location: region:354534-358208:1
so has part: feature:354534-358208:1:exon
subclass of: SO_0000010

121059837
type: Gene
SIO_000068: ncbigene

position:354534:1
position: 354534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358208:1
position: 358208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354534-358208:1:exon

HOXB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB2
product: homeobox B2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537006.1
SIO_010081: HOXB2
subclass of: SO_0000673
so part of: HOXB2
location: join(354534..354921,356050..358208)
location: region:354534-358208:1
so has part: feature:354534-354921:1:exon
so has part: feature:356050-358208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354534-354921:1:exon

position:354921:1
position: 354921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356050-358208:1:exon

position:356050:1
position: 356050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B2
translation: MNFEFEREIGFINSQPSLAECLTSLPAVLETFQTSSIKNSTLIPPPFEQTVLSLNPCSSSQGRPRSQKRASHGLLRPQPPAQPGPLAAEFPWMKEKKSSKKATQAPSSSSSSSPPSSSSLPIPAAGSPADTQGLADTSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTRHKEPPDGDAACPGPDEGSDPLDEAEDGPALRPSRGQARPELPGGPRSPAQPRAAASRPQRARPGGRDSPPPPELGIFSAEPCLQLSPGLQDSLGSPVHFSEEDLDFFASALCAAELQHLNFQ
SIO_010081: HOXB2
subclass of: SO_0000673
so part of: HOXB2
location: join(354534..354921,356050..356630)
location: region:354534-356630:1
so has part: feature:354534-354921:1:exon
so has part: feature:356050-356630:1:exon

XP_040392940.1
type: Protein
SIO_000068: ncbiprotein

position:356630:1
position: 356630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354534-354921:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356050-356630:1:exon

LOC121059838
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354848..401726)
location: region:354848-401726:-1
so has part: feature:354848-401726:-1:exon
subclass of: SO_0000011

121059838
type: Gene
SIO_000068: ncbigene

position:354848:-1
position: 354848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401726:-1
position: 401726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354848-401726:-1:exon

LOC121059838
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059838
product: uncharacterized LOC121059838
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814659.1
SIO_010081: LOC121059838
subclass of: SO_0000673
so part of: LOC121059838
location: complement(join(354848..354953,367107..367240,373466..373558,374030..374188,401142..401726))
location: region:354848-401726:-1
so has part: feature:401142-401726:-1:exon
so has part: feature:374030-374188:-1:exon
so has part: feature:373466-373558:-1:exon
so has part: feature:367107-367240:-1:exon
so has part: feature:354848-354953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401142-401726:-1:exon

position:401142:-1
position: 401142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374030-374188:-1:exon

position:374030:-1
position: 374030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374188:-1
position: 374188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373466-373558:-1:exon

position:373466:-1
position: 373466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373558:-1
position: 373558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367107-367240:-1:exon

position:367107:-1
position: 367107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367240:-1
position: 367240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:354848-354953:-1:exon

position:354953:-1
position: 354953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXB1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 364338..369170
location: region:364338-369170:1
so has part: feature:364338-369170:1:exon
subclass of: SO_0000010

121059836
type: Gene
SIO_000068: ncbigene

position:364338:1
position: 364338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369170:1
position: 369170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364338-369170:1:exon

HOXB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HOXB1
product: homeobox B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040537005.1
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: join(364338..366267,366995..369170)
location: region:364338-369170:1
so has part: feature:364338-366267:1:exon
so has part: feature:366995-369170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364338-366267:1:exon

position:366267:1
position: 366267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366995-369170:1:exon

position:366995:1
position: 366995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B1
translation: MEGSFTALTYYLKVVGQAESPQNRLTLLHQWQMDNTRMNSFLEYAICNRGTGAYHHLEQSSPSFPSCSGSPATDPFHGDGRFGAGGSAAAAAQLPQQGPGFAPAPAGRAVPFAGAAPAAGYPAATCGAGYGPPPLYLGAQEADAGYLPAAGFAASAGPHLGSLAEGYGGAAAGHYPQHLYGQEQPGFLAGLYGSLSPAPSEDKDPACPSEPCPSAGTTRTFDWMKVKRNPPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREKEGFAPAAASRSAKEASEASDQSNCTSPEASPSSVSS
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: join(365568..366267,366995..367320)
location: region:365568-367320:1
so has part: feature:365568-366267:1:exon
so has part: feature:366995-367320:1:exon

XP_040392939.1
type: Protein
SIO_000068: ncbiprotein

position:365568:1
position: 365568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367320:1
position: 367320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365568-366267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366995-367320:1:exon

SKAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 421324..557746
location: region:421324-557746:1
so has part: feature:421324-557746:1:exon
subclass of: SO_0000010

121059881
type: Gene
SIO_000068: ncbigene

position:421324:1
position: 421324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557746:1
position: 557746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421324-557746:1:exon

SKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SKAP1
product: src kinase associated phosphoprotein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040537067.1
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(421324..421453,427742..427847,438944..438969,452978..453094,541014..541094,542255..542338,544182..544306,544732,545056..545118,546150..546305,550773..550829,556201..556313,556534..557746)
location: region:421324-557746:1
so has part: feature:421324-421453:1:exon
so has part: feature:427742-427847:1:exon
so has part: feature:438944-438969:1:exon
so has part: feature:452978-453094:1:exon
so has part: feature:541014-541094:1:exon
so has part: feature:542255-542338:1:exon
so has part: feature:544182-544306:1:exon
so has part: feature:544732-544732:1:exon
so has part: feature:545056-545118:1:exon
so has part: feature:546150-546305:1:exon
so has part: feature:550773-550829:1:exon
so has part: feature:556201-556313:1:exon
so has part: feature:556534-557746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421324-421453:1:exon

position:421453:1
position: 421453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427742-427847:1:exon

position:427742:1
position: 427742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427847:1
position: 427847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:438944-438969:1:exon

position:438944:1
position: 438944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438969:1
position: 438969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452978-453094:1:exon

position:452978:1
position: 452978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453094:1
position: 453094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:541014-541094:1:exon

position:541014:1
position: 541014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541094:1
position: 541094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542255-542338:1:exon

position:542255:1
position: 542255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542338:1
position: 542338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:544182-544306:1:exon

position:544182:1
position: 544182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544306:1
position: 544306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:544732-544732:1:exon

position:544732:1
position: 544732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:545056-545118:1:exon

position:545056:1
position: 545056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545118:1
position: 545118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:546150-546305:1:exon

position:546150:1
position: 546150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546305:1
position: 546305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:550773-550829:1:exon

position:550773:1
position: 550773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550829:1
position: 550829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:556201-556313:1:exon

position:556201:1
position: 556201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556313:1
position: 556313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:556534-557746:1:exon

position:556534:1
position: 556534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SKAP1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:542317..542319,aa:OTHER)
product: LOW QUALITY PROTEIN: src kinase-associated phosphoprotein 1
translation: MLPEEVRRLLEDAECYLVDGLQNENLSPKAREQRDAILFSFQQVKARYHLEFLPRGEDQHDAGFGQDSSDENQSWSLAPSMTSDVSLPSDFLDDGLEEITPRPVQDTGNILKQGYLEKRSRDHSFFGSEWQKRWCVLNKRTFXLLCHEKSKQPKGTFSIEQYSARLAFHLRKDSRRRCCFELICPGKRTYEFHSPSPAEAEDWVDQIQFLLKDLSSLTIPYDEEDEEELYNDVDSSDSVTTASHNTTLNQDDGMEEDDVYEVFPEKEPSIAEDSKDAGSGQRNGGPQRDYANYYQGMWDCSGEHPNELSFHRGDLIYILSKPARVPAVTLFLPAAFSATPVRASCIHMQHLKCPKARFFSQ
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(421420..421453,427742..427847,438944..438969,452978..453094,541014..541094,542255..542338,544182..544306,544732,545056..545118,546150..546305,550773..550829,556201..556313,556534..556656)
location: region:421420-556656:1
so has part: feature:421420-421453:1:exon
so has part: feature:427742-427847:1:exon
so has part: feature:438944-438969:1:exon
so has part: feature:452978-453094:1:exon
so has part: feature:541014-541094:1:exon
so has part: feature:542255-542338:1:exon
so has part: feature:544182-544306:1:exon
so has part: feature:544732-544732:1:exon
so has part: feature:545056-545118:1:exon
so has part: feature:546150-546305:1:exon
so has part: feature:550773-550829:1:exon
so has part: feature:556201-556313:1:exon
so has part: feature:556534-556656:1:exon

XP_040393001.1
type: Protein
SIO_000068: ncbiprotein

position:421420:1
position: 421420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556656:1
position: 556656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421420-421453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427742-427847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:438944-438969:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452978-453094:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541014-541094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542255-542338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544182-544306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:544732-544732:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545056-545118:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546150-546305:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:550773-550829:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:556201-556313:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:556534-556656:1:exon

SNX11
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(571126..576926)
location: region:571126-576926:-1
so has part: feature:571126-576926:-1:exon
subclass of: SO_0000010

121059882
type: Gene
SIO_000068: ncbigene

position:571126:-1
position: 571126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576926:-1
position: 576926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571126-576926:-1:exon

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SNX11
product: sorting nexin 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537068.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(571126..572249,573604..573816,574002..574100,574344..574444,574786..574872,575177..575225,576823..576926))
location: region:571126-576926:-1
so has part: feature:576823-576926:-1:exon
so has part: feature:575177-575225:-1:exon
so has part: feature:574786-574872:-1:exon
so has part: feature:574344-574444:-1:exon
so has part: feature:574002-574100:-1:exon
so has part: feature:573604-573816:-1:exon
so has part: feature:571126-572249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576823-576926:-1:exon

position:576823:-1
position: 576823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575177-575225:-1:exon

position:575177:-1
position: 575177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575225:-1
position: 575225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:574786-574872:-1:exon

position:574786:-1
position: 574786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574872:-1
position: 574872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:574344-574444:-1:exon

position:574344:-1
position: 574344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574444:-1
position: 574444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:574002-574100:-1:exon

position:574002:-1
position: 574002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574100:-1
position: 574100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:573604-573816:-1:exon

position:573604:-1
position: 573604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573816:-1
position: 573816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:571126-572249:-1:exon

position:572249:-1
position: 572249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SNX11
product: sorting nexin 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040537071.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(571126..572249,573604..573816,574002..574100,574344..574444,574786..574872,575177..575225,576206..576406))
location: region:571126-576406:-1
so has part: feature:576206-576406:-1:exon
so has part: feature:575177-575225:-1:exon
so has part: feature:574786-574872:-1:exon
so has part: feature:574344-574444:-1:exon
so has part: feature:574002-574100:-1:exon
so has part: feature:573604-573816:-1:exon
so has part: feature:571126-572249:-1:exon

position:576406:-1
position: 576406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576206-576406:-1:exon

position:576206:-1
position: 576206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575177-575225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574786-574872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574344-574444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574002-574100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573604-573816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571126-572249:-1:exon

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SNX11
product: sorting nexin 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537069.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(571126..572249,573604..573816,574002..574100,574344..574444,574786..574872,575177..575225,576202..576405))
location: region:571126-576405:-1
so has part: feature:576202-576405:-1:exon
so has part: feature:575177-575225:-1:exon
so has part: feature:574786-574872:-1:exon
so has part: feature:574344-574444:-1:exon
so has part: feature:574002-574100:-1:exon
so has part: feature:573604-573816:-1:exon
so has part: feature:571126-572249:-1:exon

position:576405:-1
position: 576405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576202-576405:-1:exon

position:576202:-1
position: 576202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575177-575225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574786-574872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574344-574444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574002-574100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573604-573816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571126-572249:-1:exon

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SNX11
product: sorting nexin 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040537070.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(571126..572249,573604..573816,574002..574100,574344..574444,574786..574872,575177..575225,575774..575969))
location: region:571126-575969:-1
so has part: feature:575774-575969:-1:exon
so has part: feature:575177-575225:-1:exon
so has part: feature:574786-574872:-1:exon
so has part: feature:574344-574444:-1:exon
so has part: feature:574002-574100:-1:exon
so has part: feature:573604-573816:-1:exon
so has part: feature:571126-572249:-1:exon

position:575969:-1
position: 575969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575774-575969:-1:exon

position:575774:-1
position: 575774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575177-575225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574786-574872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574344-574444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574002-574100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573604-573816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571126-572249:-1:exon

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-11
translation: MLEGREEELTTVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSTFFVGSTDEFIEKRRQGLQQFLEKVVQNVVLLSDSRLHLFLQSQLSVPEIEACVQGQGAQTVTDAILHYAMSNCGWAQEEESRPALLPGGDLRGSCAGLGGPQGPSCLEPLPHWSDFGMDDSHLDSPAEPAEPLGGAQELQ
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(572108..572249,573604..573816,574002..574100,574344..574444,574786..574872,575177..575197))
location: region:572108-575197:-1
so has part: feature:575177-575197:-1:exon
so has part: feature:574786-574872:-1:exon
so has part: feature:574344-574444:-1:exon
so has part: feature:574002-574100:-1:exon
so has part: feature:573604-573816:-1:exon
so has part: feature:572108-572249:-1:exon

XP_040393002.1
type: Protein
SIO_000068: ncbiprotein

position:572108:-1
position: 572108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575197:-1
position: 575197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575177-575197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574786-574872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574344-574444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574002-574100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573604-573816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572108-572249:-1:exon

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-11
translation: MLEGREEELTTVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSTFFVGSTDEFIEKRRQGLQQFLEKVVQNVVLLSDSRLHLFLQSQLSVPEIEACVQGQGAQTVTDAILHYAMSNCGWAQEEESRPALLPGGDLRGSCAGLGGPQGPSCLEPLPHWSDFGMDDSHLDSPAEPAEPLGGAQELQ
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(572108..572249,573604..573816,574002..574100,574344..574444,574786..574872,575177..575197))
location: region:572108-575197:-1
so has part: feature:575177-575197:-1:exon
so has part: feature:574786-574872:-1:exon
so has part: feature:574344-574444:-1:exon
so has part: feature:574002-574100:-1:exon
so has part: feature:573604-573816:-1:exon
so has part: feature:572108-572249:-1:exon

XP_040393003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575177-575197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574786-574872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574344-574444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574002-574100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573604-573816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572108-572249:-1:exon

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-11
translation: MLEGREEELTTVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSTFFVGSTDEFIEKRRQGLQQFLEKVVQNVVLLSDSRLHLFLQSQLSVPEIEACVQGQGAQTVTDAILHYAMSNCGWAQEEESRPALLPGGDLRGSCAGLGGPQGPSCLEPLPHWSDFGMDDSHLDSPAEPAEPLGGAQELQ
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(572108..572249,573604..573816,574002..574100,574344..574444,574786..574872,575177..575197))
location: region:572108-575197:-1
so has part: feature:575177-575197:-1:exon
so has part: feature:574786-574872:-1:exon
so has part: feature:574344-574444:-1:exon
so has part: feature:574002-574100:-1:exon
so has part: feature:573604-573816:-1:exon
so has part: feature:572108-572249:-1:exon

XP_040393004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575177-575197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574786-574872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574344-574444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574002-574100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573604-573816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572108-572249:-1:exon

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-11
translation: MLEGREEELTTVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSTFFVGSTDEFIEKRRQGLQQFLEKVVQNVVLLSDSRLHLFLQSQLSVPEIEACVQGQGAQTVTDAILHYAMSNCGWAQEEESRPALLPGGDLRGSCAGLGGPQGPSCLEPLPHWSDFGMDDSHLDSPAEPAEPLGGAQELQ
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(572108..572249,573604..573816,574002..574100,574344..574444,574786..574872,575177..575197))
location: region:572108-575197:-1
so has part: feature:575177-575197:-1:exon
so has part: feature:574786-574872:-1:exon
so has part: feature:574344-574444:-1:exon
so has part: feature:574002-574100:-1:exon
so has part: feature:573604-573816:-1:exon
so has part: feature:572108-572249:-1:exon

XP_040393005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575177-575197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574786-574872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574344-574444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574002-574100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573604-573816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572108-572249:-1:exon

CBX1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 577201..586134
location: region:577201-586134:1
so has part: feature:577201-586134:1:exon
subclass of: SO_0000010

121059884
type: Gene
SIO_000068: ncbigene

position:577201:1
position: 577201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586134:1
position: 586134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577201-586134:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CBX1
product: chromobox 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040537072.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(577201..577356,582256..582431,582934..583111,583818..583912,584564..585148)
location: region:577201-585148:1
so has part: feature:577201-577356:1:exon
so has part: feature:582256-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-585148:1:exon

position:585148:1
position: 585148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577201-577356:1:exon

position:577356:1
position: 577356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582256-582431:1:exon

position:582256:1
position: 582256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582431:1
position: 582431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:582934-583111:1:exon

position:582934:1
position: 582934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583111:1
position: 583111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583818-583912:1:exon

position:583818:1
position: 583818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583912:1
position: 583912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584564-585148:1:exon

position:584564:1
position: 584564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CBX1
product: chromobox 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040537075.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(577242..577356,582259..582431,582934..583111,583818..583912,584564..585148)
location: region:577242-585148:1
so has part: feature:577242-577356:1:exon
so has part: feature:582259-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-585148:1:exon

position:577242:1
position: 577242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577242-577356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582259-582431:1:exon

position:582259:1
position: 582259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584564-585148:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CBX1
product: chromobox 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537076.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(577913..578050,582256..582431,582934..583111,583818..583912,584564..585148)
location: region:577913-585148:1
so has part: feature:577913-578050:1:exon
so has part: feature:582256-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-585148:1:exon

position:577913:1
position: 577913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577913-578050:1:exon

position:578050:1
position: 578050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582256-582431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584564-585148:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CBX1
product: chromobox 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040537073.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(578649..579331,582256..582431,582934..583111,583818..583912,584564..586134)
location: region:578649-586134:1
so has part: feature:578649-579331:1:exon
so has part: feature:582256-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-586134:1:exon

position:578649:1
position: 578649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578649-579331:1:exon

position:579331:1
position: 579331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582256-582431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584564-586134:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CBX1
product: chromobox 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537074.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(578649..579369,582256..582431,582934..583111,583818..583912,584564..585148)
location: region:578649-585148:1
so has part: feature:578649-579369:1:exon
so has part: feature:582256-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-585148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578649-579369:1:exon

position:579369:1
position: 579369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582256-582431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584564-585148:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(582292..582431,582934..583111,583818..583912,584564..584708)
location: region:582292-584708:1
so has part: feature:582292-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-584708:1:exon

XP_040393006.1
type: Protein
SIO_000068: ncbiprotein

position:582292:1
position: 582292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584708:1
position: 584708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582292-582431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584564-584708:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(582292..582431,582934..583111,583818..583912,584564..584708)
location: region:582292-584708:1
so has part: feature:582292-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-584708:1:exon

XP_040393007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582292-582431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584564-584708:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(582292..582431,582934..583111,583818..583912,584564..584708)
location: region:582292-584708:1
so has part: feature:582292-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-584708:1:exon

XP_040393008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582292-582431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584564-584708:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(582292..582431,582934..583111,583818..583912,584564..584708)
location: region:582292-584708:1
so has part: feature:582292-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-584708:1:exon

XP_040393009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582292-582431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584564-584708:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(582292..582431,582934..583111,583818..583912,584564..584708)
location: region:582292-584708:1
so has part: feature:582292-582431:1:exon
so has part: feature:582934-583111:1:exon
so has part: feature:583818-583912:1:exon
so has part: feature:584564-584708:1:exon

XP_040393010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582292-582431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582934-583111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583818-583912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584564-584708:1:exon

LOC121059885
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(585164..588377)
location: region:585164-588377:-1
so has part: feature:585164-588377:-1:exon
subclass of: SO_0000011

121059885
type: Gene
SIO_000068: ncbigene

position:585164:-1
position: 585164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588377:-1
position: 588377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585164-588377:-1:exon

LOC121059885
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059885
product: uncharacterized LOC121059885
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814681.1
SIO_010081: LOC121059885
subclass of: SO_0000673
so part of: LOC121059885
location: complement(join(585164..586365,586459..588377))
location: region:585164-588377:-1
so has part: feature:586459-588377:-1:exon
so has part: feature:585164-586365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586459-588377:-1:exon

position:586459:-1
position: 586459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585164-586365:-1:exon

position:586365:-1
position: 586365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFE2L1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(589049..598947)
location: region:589049-598947:-1
so has part: feature:589049-598947:-1:exon
subclass of: SO_0000010

121059886
type: Gene
SIO_000068: ncbigene

position:589049:-1
position: 589049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598947:-1
position: 598947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589049-598947:-1:exon

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 183 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040537078.1
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(589049..592288,592727..592888,593262..593351,593918..594133,597784..598295,598874..598947))
location: region:589049-598947:-1
so has part: feature:598874-598947:-1:exon
so has part: feature:597784-598295:-1:exon
so has part: feature:593918-594133:-1:exon
so has part: feature:593262-593351:-1:exon
so has part: feature:592727-592888:-1:exon
so has part: feature:589049-592288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598874-598947:-1:exon

position:598874:-1
position: 598874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:597784-598295:-1:exon

position:597784:-1
position: 597784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598295:-1
position: 598295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:593918-594133:-1:exon

position:593918:-1
position: 593918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594133:-1
position: 594133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593262-593351:-1:exon

position:593262:-1
position: 593262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593351:-1
position: 593351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592727-592888:-1:exon

position:592727:-1
position: 592727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592888:-1
position: 592888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:589049-592288:-1:exon

position:592288:-1
position: 592288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1
translation: MLSLKKYFTEGLIQFTILLSLIGVRVDVDTYLTSQLPPLREIILGQSSAYTQTQFHNLRNTLDGYGIHPKSVDLDYYFTARRLLNQVRALDRFQVPSTEVSAWLVHRDPEGSVSGTQPSAGIALENGGGLQDGSGPDGGVRESGAEQGFGEELEDLGAVAPPVNGDLTKEDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKDLSDGRERGDGWRSAGSEGLDRNLLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGENSEFPAADVSTLSEAVPSESRPAGIQSSLLSPLLPETESPFDLEQQWQDLMSIMEMQAMEVNNTTAETLYNGTGGDLLASNYSLAPNTPINQNVSLHQASLGSCSQDFSLFSSEIESPSMAGSSALLQLAPDNSTGLNTTFSSTNLSGIFFPPQLNSTVNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEETEGAVGYQPEYSKFCRMSYQDPSQLHYLPYLEHVGHNHTYNMAPGTLDPEEPKVPSAGKKSSKEKPSEFLDKQMSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKSKLLREKVEFLKSIRQMKQKVQNLYQEVFGRLRDENGQPYSPNQYALQYASDGSVILIPRTLADQQARRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(590936..592288,592727..592888,593262..593351,593918..594133,597784..598293))
location: region:590936-598293:-1
so has part: feature:597784-598293:-1:exon
so has part: feature:593918-594133:-1:exon
so has part: feature:593262-593351:-1:exon
so has part: feature:592727-592888:-1:exon
so has part: feature:590936-592288:-1:exon

XP_040393012.1
type: Protein
SIO_000068: ncbiprotein

position:590936:-1
position: 590936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598293:-1
position: 598293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597784-598293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:593918-594133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:593262-593351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592727-592888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590936-592288:-1:exon

COPZ2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 601398..603409
location: region:601398-603409:1
so has part: feature:601398-603409:1:exon
subclass of: SO_0000010

121059887
type: Gene
SIO_000068: ncbigene

position:601398:1
position: 601398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603409:1
position: 603409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601398-603409:1:exon

COPZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: COPZ2
product: COPI coat complex subunit zeta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040537079.1
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(601398..601464,601903..601971,602070..602151,602253..602344,602403..602458,602584..602661,602943..602994,603079..603409)
location: region:601398-603409:1
so has part: feature:601398-601464:1:exon
so has part: feature:601903-601971:1:exon
so has part: feature:602070-602151:1:exon
so has part: feature:602253-602344:1:exon
so has part: feature:602403-602458:1:exon
so has part: feature:602584-602661:1:exon
so has part: feature:602943-602994:1:exon
so has part: feature:603079-603409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601398-601464:1:exon

position:601464:1
position: 601464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601903-601971:1:exon

position:601903:1
position: 601903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601971:1
position: 601971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602070-602151:1:exon

position:602070:1
position: 602070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602151:1
position: 602151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602253-602344:1:exon

position:602253:1
position: 602253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602344:1
position: 602344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:602403-602458:1:exon

position:602403:1
position: 602403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602458:1
position: 602458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:602584-602661:1:exon

position:602584:1
position: 602584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602661:1
position: 602661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:602943-602994:1:exon

position:602943:1
position: 602943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602994:1
position: 602994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:603079-603409:1:exon

position:603079:1
position: 603079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: COPZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-2
translation: MEPTGLPEPSLYTVKALLILDSRGQRLLAKYYDSSFPTAQEQAAFESSIFSKTCGAGGEIACLEGLTVVYRSSSDLLFYVVGGPQENELMLSAVLGCLCDALGLVLRKDLEKRWLLENLDGAFLVVDEIVDRGVILESDPQRVLQRLGPRAPEPAPYGFVLFDYLVGSREQGGAGAADPHK
SIO_010081: COPZ2
subclass of: SO_0000673
so part of: COPZ2
location: join(601444..601464,601903..601971,602070..602151,602253..602344,602403..602458,602584..602661,602943..602994,603079..603174)
location: region:601444-603174:1
so has part: feature:601444-601464:1:exon
so has part: feature:601903-601971:1:exon
so has part: feature:602070-602151:1:exon
so has part: feature:602253-602344:1:exon
so has part: feature:602403-602458:1:exon
so has part: feature:602584-602661:1:exon
so has part: feature:602943-602994:1:exon
so has part: feature:603079-603174:1:exon

XP_040393013.1
type: Protein
SIO_000068: ncbiprotein

position:601444:1
position: 601444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603174:1
position: 603174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601444-601464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601903-601971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602070-602151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602253-602344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602403-602458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:602584-602661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602943-602994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603079-603174:1:exon

CDK5RAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(606026..609438)
location: region:606026-609438:-1
so has part: feature:606026-609438:-1:exon
subclass of: SO_0000010

121059888
type: Gene
SIO_000068: ncbigene

position:606026:-1
position: 606026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609438:-1
position: 609438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606026-609438:-1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537083.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606026..606207,606276..606447,606561..606769,606855..606943,607087..607162,607265..607378,607666..607810,607927..608063,608257..608435,608577..608625,608740..608840,608947..609078,609202..609259,609378..609438))
location: region:606026-609438:-1
so has part: feature:609378-609438:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608740-608840:-1:exon
so has part: feature:608577-608625:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607162:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606561-606769:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606026-606207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609438:-1:exon

position:609378:-1
position: 609378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

position:609202:-1
position: 609202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609259:-1
position: 609259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

position:608947:-1
position: 608947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609078:-1
position: 609078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:608740-608840:-1:exon

position:608740:-1
position: 608740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608840:-1
position: 608840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:608577-608625:-1:exon

position:608577:-1
position: 608577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608625:-1
position: 608625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:608257-608435:-1:exon

position:608257:-1
position: 608257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608435:-1
position: 608435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:607927-608063:-1:exon

position:607927:-1
position: 607927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608063:-1
position: 608063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607666-607810:-1:exon

position:607666:-1
position: 607666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607810:-1
position: 607810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:607265-607378:-1:exon

position:607265:-1
position: 607265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607378:-1
position: 607378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:607087-607162:-1:exon

position:607087:-1
position: 607087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607162:-1
position: 607162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:606855-606943:-1:exon

position:606855:-1
position: 606855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606943:-1
position: 606943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:606561-606769:-1:exon

position:606561:-1
position: 606561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606769:-1
position: 606769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:606276-606447:-1:exon

position:606276:-1
position: 606276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606447:-1
position: 606447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:606026-606207:-1:exon

position:606207:-1
position: 606207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537080.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606026..606207,606276..606447,606561..606943,607087..607162,607265..607378,607666..607810,607927..608063,608257..608435,608577..608625,608740..608840,608947..609078,609202..609259,609378..609438))
location: region:606026-609438:-1
so has part: feature:609378-609438:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608740-608840:-1:exon
so has part: feature:608577-608625:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607162:-1:exon
so has part: feature:606561-606943:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606026-606207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608740-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608577-608625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607087-607162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606561-606943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606026-606207:-1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537084.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606026..606207,606276..606447,606561..606769,606855..606943,607087..607159,607265..607378,607666..607810,607927..608063,608257..608435,608577..608625,608740..608840,608947..609078,609202..609259,609378..609422))
location: region:606026-609422:-1
so has part: feature:609378-609422:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608740-608840:-1:exon
so has part: feature:608577-608625:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607159:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606561-606769:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606026-606207:-1:exon

position:609422:-1
position: 609422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608740-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608577-608625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607087-607159:-1:exon

position:607159:-1
position: 607159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606561-606769:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:606026-606207:-1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537081.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606026..606207,606276..606447,606561..606769,606855..606943,607087..607162,607265..607378,607666..607810,607927..608063,608257..608435,608577..608840,608947..609078,609202..609259,609378..609417))
location: region:606026-609417:-1
so has part: feature:609378-609417:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608577-608840:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607162:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606561-606769:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606026-606207:-1:exon

position:609417:-1
position: 609417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608577-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607087-607162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606561-606769:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606026-606207:-1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537082.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606026..606207,606276..606447,606561..606769,606855..606943,607087..607159,607265..607378,607666..607810,607927..608063,608257..608435,608577..608840,608947..609078,609202..609259,609378..609399))
location: region:606026-609399:-1
so has part: feature:609378-609399:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608577-608840:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607159:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606561-606769:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606026-606207:-1:exon

position:609399:-1
position: 609399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608577-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607087-607159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606561-606769:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606026-606207:-1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537085.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606026..606207,606276..606447,606855..606943,607087..607162,607265..607378,607666..607810,607927..608063,608257..608435,608577..608625,608740..608840,608947..609078,609202..609259,609378..609398))
location: region:606026-609398:-1
so has part: feature:609378-609398:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608740-608840:-1:exon
so has part: feature:608577-608625:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607162:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606026-606207:-1:exon

position:609398:-1
position: 609398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608740-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608577-608625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607087-607162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606026-606207:-1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X6
translation: MQAPPQDYRDVPIDIQTSKLLDWLLDRRHCGRRWQAQARAVRQRMEAALRDMPEHPEIRQLLAGTALHYFHCLRIVEILRGTEASTRNLFGRYSSQRMKDWQEIVALYEKENTYLAELASLLVRSVSYEAPALRKQISRCQQAQQDFARREEECQLAAAELRERFYASCKQYGITGDNVRQELLALVKELPSLLSGIGAGASALTEAIELYEACVEFVCESSAEPVLPLLRHVGRRGNTTVYEWRTGLEPVRVERPEVQEVPEQPKEDAIDWGDFTLEPSGASDGAAAGGGAQDEIDWGITLEPSPQQDDGIDWGDGESDGAQISVVEAGTEGPEGVARGSEALTLLEHAETRNRFIDELMEVRGPRQRAAAAEAEAGGAAAGQEGGAEPEAAGGAGGAGRPGAQAGPPAGGDQGAPAADRGRHLQALRRAAGEPDGRLAVSGWGPGPPPEGSWAPAPLVPPQRYRGRGLGAAQ
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606041..606207,606276..606447,606855..606943,607087..607162,607265..607378,607666..607810,607927..608063,608257..608435,608577..608625,608740..608840,608947..609078,609202..609259,609378..609383))
location: region:606041-609383:-1
so has part: feature:609378-609383:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608740-608840:-1:exon
so has part: feature:608577-608625:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607162:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606041-606207:-1:exon

XP_040393019.1
type: Protein
SIO_000068: ncbiprotein

position:606041:-1
position: 606041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609383:-1
position: 609383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608740-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608577-608625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607087-607162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606041-606207:-1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X1
translation: MQAPPQDYRDVPIDIQTSKLLDWLLDRRHCGRRWQAQARAVRQRMEAALRDMPEHPEIRQLLAGTALHYFHCLRIVEILRGTEASTRNLFGRYSSQRMKDWQEIVALYEKENTYLAELASLLVRSVSYEAPALRKQISRCQQAQQDFARREEECQLAAAELRERFYASCKQYGITGDNVRQELLALVKELPSLLSGIGAGASALTEAIELYEACVEFVCESSAEPVLPLLRHVGRRGNTTVYEWRTGLEPVRVERPEVQEVPEQPKEDAIDWGDFTLEPSGASDGAAAGGGAQDEIDWGITLEPSPQQDDGIDWGDGESDGAQISVVEAGTEGPEGVARGSEALTLLEHAETRNRFIDELMEVSGAGAARAPSPRGVGCWPPPPSGAVPAAGAVPGAAPGGDGGGGGRRPGRQPVPAGPCRAAGPDQRPRGLPAGRHPGAAGPAGRPAHAAPLHHPRLPQVRGPRQRAAAAEAEAGGAAAGQEGGAEPEAAGGAGGAGRPGAQAGPPAGGDQGAPAADRGRHLQALRRAAGEPDGRLAVSGWGPGPPPEGSWAPAPLVPPQRYRGRGLGAAQ
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606041..606207,606276..606447,606561..606943,607087..607162,607265..607378,607666..607810,607927..608063,608257..608435,608577..608625,608740..608840,608947..609078,609202..609259,609378..609383))
location: region:606041-609383:-1
so has part: feature:609378-609383:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608740-608840:-1:exon
so has part: feature:608577-608625:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607162:-1:exon
so has part: feature:606561-606943:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606041-606207:-1:exon

XP_040393014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608740-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608577-608625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607087-607162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606561-606943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606041-606207:-1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X5
translation: MQAPPQDYRDVPIDIQTSKLLDWLLDRRHCGRRWQAQARAVRQRMEAALRDMPEHPEIRQLLAGTALHYFHCLRIVEILRGTEASTRNLFGRYSSQRMKDWQEIVALYEKENTYLAELASLLVRSVSYEAPALRKQISRCQQAQQDFARREEECQLAAAELRERFYASCKQYGITGDNVRQELLALVKELPSLLSGIGAGASALTEAIELYEACVEFVCESSAEPVLPLLRHVGRRGNTTVYEWRTGLEPVRVERPEVQEVPEQPKEDAIDWGDFTLEPSGASDGAAAGGGAQDEIDWGITLEPSPQDDGIDWGDGESDGAQISVVEAGTEGPEGVARGSEALTLLEHAETRNRFIDELMELELFLAQRLVEMEEAEADVLAASQFQLAPAALQGQTSARVGSLLAGTRALLGQLGARRTQHLFTILASPRYVDRVSELLRQKLKQAELLLAKREALSRKRQEALAEQGALEPKLDRLLEGTRELQQLIEADISKRYGGRPVNLMGVSL
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606142..606207,606276..606447,606561..606769,606855..606943,607087..607159,607265..607378,607666..607810,607927..608063,608257..608435,608577..608625,608740..608840,608947..609078,609202..609259,609378..609383))
location: region:606142-609383:-1
so has part: feature:609378-609383:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608740-608840:-1:exon
so has part: feature:608577-608625:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607159:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606561-606769:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606142-606207:-1:exon

XP_040393018.1
type: Protein
SIO_000068: ncbiprotein

position:606142:-1
position: 606142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608740-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608577-608625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607087-607159:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606561-606769:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:606142-606207:-1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X4
translation: MQAPPQDYRDVPIDIQTSKLLDWLLDRRHCGRRWQAQARAVRQRMEAALRDMPEHPEIRQLLAGTALHYFHCLRIVEILRGTEASTRNLFGRYSSQRMKDWQEIVALYEKENTYLAELASLLVRSVSYEAPALRKQISRCQQAQQDFARREEECQLAAAELRERFYASCKQYGITGDNVRQELLALVKELPSLLSGIGAGASALTEAIELYEACVEFVCESSAEPVLPLLRHVGRRGNTTVYEWRTGLEPVRVERPEVQEVPEQPKEDAIDWGDFTLEPSGASDGAAAGGGAQDEIDWGITLEPSPQQDDGIDWGDGESDGAQISVVEAGTEGPEGVARGSEALTLLEHAETRNRFIDELMELELFLAQRLVEMEEAEADVLAASQFQLAPAALQGQTSARVGSLLAGTRALLGQLGARRTQHLFTILASPRYVDRVSELLRQKLKQAELLLAKREALSRKRQEALAEQGALEPKLDRLLEGTRELQQLIEADISKRYGGRPVNLMGVSL
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606142..606207,606276..606447,606561..606769,606855..606943,607087..607162,607265..607378,607666..607810,607927..608063,608257..608435,608577..608625,608740..608840,608947..609078,609202..609259,609378..609383))
location: region:606142-609383:-1
so has part: feature:609378-609383:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608740-608840:-1:exon
so has part: feature:608577-608625:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607162:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606561-606769:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606142-606207:-1:exon

XP_040393017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608740-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608577-608625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607087-607162:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606561-606769:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:606142-606207:-1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X3
translation: MQAPPQDYRDVPIDIQTSKLLDWLLDRRHCGRRWQAQARAVRQRMEAALRDMPEHPEIRQLLAGTALHYFHCLRIVEILRGTEASTRNLFGRYSSQRMKVSGHRHRHWDGAGSGPALTAPPALPPPALPPPPLPPLQDWQEIVALYEKENTYLAELASLLVRSVSYEAPALRKQISRCQQAQQDFARREEECQLAAAELRERFYASCKQYGITGDNVRQELLALVKELPSLLSGIGAGASALTEAIELYEACVEFVCESSAEPVLPLLRHVGRRGNTTVYEWRTGLEPVRVERPEVQEVPEQPKEDAIDWGDFTLEPSGASDGAAAGGGAQDEIDWGITLEPSPQDDGIDWGDGESDGAQISVVEAGTEGPEGVARGSEALTLLEHAETRNRFIDELMELELFLAQRLVEMEEAEADVLAASQFQLAPAALQGQTSARVGSLLAGTRALLGQLGARRTQHLFTILASPRYVDRVSELLRQKLKQAELLLAKREALSRKRQEALAEQGALEPKLDRLLEGTRELQQLIEADISKRYGGRPVNLMGVSL
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606142..606207,606276..606447,606561..606769,606855..606943,607087..607159,607265..607378,607666..607810,607927..608063,608257..608435,608577..608840,608947..609078,609202..609259,609378..609383))
location: region:606142-609383:-1
so has part: feature:609378-609383:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608577-608840:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607159:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606561-606769:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606142-606207:-1:exon

XP_040393016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608577-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607087-607159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606561-606769:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606142-606207:-1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X2
translation: MQAPPQDYRDVPIDIQTSKLLDWLLDRRHCGRRWQAQARAVRQRMEAALRDMPEHPEIRQLLAGTALHYFHCLRIVEILRGTEASTRNLFGRYSSQRMKVSGHRHRHWDGAGSGPALTAPPALPPPALPPPPLPPLQDWQEIVALYEKENTYLAELASLLVRSVSYEAPALRKQISRCQQAQQDFARREEECQLAAAELRERFYASCKQYGITGDNVRQELLALVKELPSLLSGIGAGASALTEAIELYEACVEFVCESSAEPVLPLLRHVGRRGNTTVYEWRTGLEPVRVERPEVQEVPEQPKEDAIDWGDFTLEPSGASDGAAAGGGAQDEIDWGITLEPSPQQDDGIDWGDGESDGAQISVVEAGTEGPEGVARGSEALTLLEHAETRNRFIDELMELELFLAQRLVEMEEAEADVLAASQFQLAPAALQGQTSARVGSLLAGTRALLGQLGARRTQHLFTILASPRYVDRVSELLRQKLKQAELLLAKREALSRKRQEALAEQGALEPKLDRLLEGTRELQQLIEADISKRYGGRPVNLMGVSL
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: complement(join(606142..606207,606276..606447,606561..606769,606855..606943,607087..607162,607265..607378,607666..607810,607927..608063,608257..608435,608577..608840,608947..609078,609202..609259,609378..609383))
location: region:606142-609383:-1
so has part: feature:609378-609383:-1:exon
so has part: feature:609202-609259:-1:exon
so has part: feature:608947-609078:-1:exon
so has part: feature:608577-608840:-1:exon
so has part: feature:608257-608435:-1:exon
so has part: feature:607927-608063:-1:exon
so has part: feature:607666-607810:-1:exon
so has part: feature:607265-607378:-1:exon
so has part: feature:607087-607162:-1:exon
so has part: feature:606855-606943:-1:exon
so has part: feature:606561-606769:-1:exon
so has part: feature:606276-606447:-1:exon
so has part: feature:606142-606207:-1:exon

XP_040393015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609378-609383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609202-609259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608947-609078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608577-608840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608257-608435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607927-608063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607666-607810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607265-607378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607087-607162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:606855-606943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606561-606769:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:606276-606447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:606142-606207:-1:exon

PRR15L
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 610002..611816
location: region:610002-611816:1
so has part: feature:610002-611816:1:exon
subclass of: SO_0000010

121059891
type: Gene
SIO_000068: ncbigene

position:610002:1
position: 610002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611816:1
position: 611816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610002-611816:1:exon

PRR15L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PRR15L
product: proline rich 15 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040537090.1
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: join(610002..610223,610831..611816)
location: region:610002-611816:1
so has part: feature:610002-610223:1:exon
so has part: feature:610831-611816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610002-610223:1:exon

position:610223:1
position: 610223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610831-611816:1:exon

position:610831:1
position: 610831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRR15L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 15-like protein
translation: MNIQRSAARPRRLPGREGFGRGFTLTRGGAAAGAGPARCARCTGVPGPRRGGRRRRPAAMAESHSWWKLTFLRKRKSMPKVLYDSPDVHAGDGPEGSGEEGTPEFAARLEKIVDKSSKGKHVKVSNSGRFKEKKKVRATLADNPGLCTGTEREEK
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: join(610060..610223,610831..611134)
location: region:610060-611134:1
so has part: feature:610060-610223:1:exon
so has part: feature:610831-611134:1:exon

XP_040393024.1
type: Protein
SIO_000068: ncbiprotein

position:610060:1
position: 610060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611134:1
position: 611134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610060-610223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610831-611134:1:exon

PNPO
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PNPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613229..615880)
location: region:613229-615880:-1
so has part: feature:613229-615880:-1:exon
subclass of: SO_0000010

121059890
type: Gene
SIO_000068: ncbigene

position:613229:-1
position: 613229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615880:-1
position: 615880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613229-615880:-1:exon

PNPO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PNPO
product: pyridoxamine 5'-phosphate oxidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537087.1
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: complement(join(613229..613990,614075..614398,614666..614719,614841..614940,615007..615131,615626..615880))
location: region:613229-615880:-1
so has part: feature:615626-615880:-1:exon
so has part: feature:615007-615131:-1:exon
so has part: feature:614841-614940:-1:exon
so has part: feature:614666-614719:-1:exon
so has part: feature:614075-614398:-1:exon
so has part: feature:613229-613990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615626-615880:-1:exon

position:615626:-1
position: 615626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615007-615131:-1:exon

position:615007:-1
position: 615007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615131:-1
position: 615131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614841-614940:-1:exon

position:614841:-1
position: 614841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614940:-1
position: 614940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614666-614719:-1:exon

position:614666:-1
position: 614666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614719:-1
position: 614719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:614075-614398:-1:exon

position:614075:-1
position: 614075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614398:-1
position: 614398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613229-613990:-1:exon

position:613990:-1
position: 613990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNPO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PNPO
product: pyridoxamine 5'-phosphate oxidase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040537089.1
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: complement(join(613229..613990,614075..614145,614270..614398,614841..614940,615007..615131,615626..615866))
location: region:613229-615866:-1
so has part: feature:615626-615866:-1:exon
so has part: feature:615007-615131:-1:exon
so has part: feature:614841-614940:-1:exon
so has part: feature:614270-614398:-1:exon
so has part: feature:614075-614145:-1:exon
so has part: feature:613229-613990:-1:exon

position:615866:-1
position: 615866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615626-615866:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615007-615131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614841-614940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614270-614398:-1:exon

position:614270:-1
position: 614270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:614075-614145:-1:exon

position:614145:-1
position: 614145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613229-613990:-1:exon

PNPO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PNPO
product: pyridoxamine 5'-phosphate oxidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537088.1
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: complement(join(613229..613990,614075..614145,614270..614398,614666..614719,614841..614940,615007..615131,615626..615840))
location: region:613229-615840:-1
so has part: feature:615626-615840:-1:exon
so has part: feature:615007-615131:-1:exon
so has part: feature:614841-614940:-1:exon
so has part: feature:614666-614719:-1:exon
so has part: feature:614270-614398:-1:exon
so has part: feature:614075-614145:-1:exon
so has part: feature:613229-613990:-1:exon

position:615840:-1
position: 615840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615626-615840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615007-615131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614841-614940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614666-614719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:614270-614398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:614075-614145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:613229-613990:-1:exon

PNPO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PNPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxine-5'-phosphate oxidase isoform X1
translation: MDLGAMRMGYRGAEEAFEERQLAARDPVAQFGAWLAEALRCPAVGEANAMCLATCSRDGKPSARMVLLKGFGQDGFRFFTNRQSRKGRELDSNPFASLVFYWEPLNRQVRIEGSVKRLSEEESEQYFHSRPKSSQIGAVASRQSAVIPDREVSGAGPAGPQQCGERPAGPGLRQQPGSCPCRAPAPSPSFPAVLDEEERRAGGEVPGRAGAEAGGLGRLHPAARRGGVLAGPNQPPARPHRLPAPAGRRGPPRAHDTARRGRVGVRAPRPLRLRLCPAARPIGGVTCAKSAACPPVSPPCPGSGGLALPCPRNSWWASGCPGARPGPRTLQSPRVCCRQGLARPANPPLPPASTWGAIAPGAAGG
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: complement(join(613541..613990,614075..614398,614666..614719,614841..614940,615007..615131,615626..615670))
location: region:613541-615670:-1
so has part: feature:615626-615670:-1:exon
so has part: feature:615007-615131:-1:exon
so has part: feature:614841-614940:-1:exon
so has part: feature:614666-614719:-1:exon
so has part: feature:614075-614398:-1:exon
so has part: feature:613541-613990:-1:exon

XP_040393021.1
type: Protein
SIO_000068: ncbiprotein

position:613541:-1
position: 613541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615670:-1
position: 615670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615626-615670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615007-615131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614841-614940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614666-614719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:614075-614398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613541-613990:-1:exon

PNPO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PNPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxine-5'-phosphate oxidase isoform X3
translation: MDLGAMRMGYRGAEEAFEERQLAARDPVAQFGAWLAEALRCPAVGEANAMCLATCSRDGKPSARMVLLKGFGQDGFRFFTNRQSRKGRELVRIEGSVKRLSEEESEQYFHSRPKSSQIGAVASRQSAVIPDREYLMKRSAELEEKYRDAPVPKPEDWGGYILQPDVVEFWQGQTNRLHDRIVFRRLRDGADPPGPMTRRGEGEWVFERLAP
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: complement(join(613825..613990,614075..614145,614270..614398,614841..614940,615007..615131,615626..615670))
location: region:613825-615670:-1
so has part: feature:615626-615670:-1:exon
so has part: feature:615007-615131:-1:exon
so has part: feature:614841-614940:-1:exon
so has part: feature:614270-614398:-1:exon
so has part: feature:614075-614145:-1:exon
so has part: feature:613825-613990:-1:exon

XP_040393023.1
type: Protein
SIO_000068: ncbiprotein

position:613825:-1
position: 613825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615626-615670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615007-615131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614841-614940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614270-614398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:614075-614145:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613825-613990:-1:exon

PNPO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PNPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxine-5'-phosphate oxidase isoform X2
translation: MDLGAMRMGYRGAEEAFEERQLAARDPVAQFGAWLAEALRCPAVGEANAMCLATCSRDGKPSARMVLLKGFGQDGFRFFTNRQSRKGRELDSNPFASLVFYWEPLNRQVRIEGSVKRLSEEESEQYFHSRPKSSQIGAVASRQSAVIPDREYLMKRSAELEEKYRDAPVPKPEDWGGYILQPDVVEFWQGQTNRLHDRIVFRRLRDGADPPGPMTRRGEGEWVFERLAP
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: complement(join(613825..613990,614075..614145,614270..614398,614666..614719,614841..614940,615007..615131,615626..615670))
location: region:613825-615670:-1
so has part: feature:615626-615670:-1:exon
so has part: feature:615007-615131:-1:exon
so has part: feature:614841-614940:-1:exon
so has part: feature:614666-614719:-1:exon
so has part: feature:614270-614398:-1:exon
so has part: feature:614075-614145:-1:exon
so has part: feature:613825-613990:-1:exon

XP_040393022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615626-615670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615007-615131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614841-614940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614666-614719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:614270-614398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:614075-614145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:613825-613990:-1:exon

SP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(616558..624799)
location: region:616558-624799:-1
so has part: feature:616558-624799:-1:exon
subclass of: SO_0000010

121059892
type: Gene
SIO_000068: ncbigene

position:616558:-1
position: 616558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624799:-1
position: 624799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616558-624799:-1:exon

SP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SP2
product: Sp2 transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040537091.1
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: complement(join(616558..616795,617119..617312,617395..617569,619445..619739,620254..621207,621845..621920,624691..624799))
location: region:616558-624799:-1
so has part: feature:624691-624799:-1:exon
so has part: feature:621845-621920:-1:exon
so has part: feature:620254-621207:-1:exon
so has part: feature:619445-619739:-1:exon
so has part: feature:617395-617569:-1:exon
so has part: feature:617119-617312:-1:exon
so has part: feature:616558-616795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624691-624799:-1:exon

position:624691:-1
position: 624691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621845-621920:-1:exon

position:621845:-1
position: 621845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621920:-1
position: 621920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620254-621207:-1:exon

position:620254:-1
position: 620254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621207:-1
position: 621207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:619445-619739:-1:exon

position:619445:-1
position: 619445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619739:-1
position: 619739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:617395-617569:-1:exon

position:617395:-1
position: 617395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617569:-1
position: 617569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:617119-617312:-1:exon

position:617119:-1
position: 617119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617312:-1
position: 617312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:616558-616795:-1:exon

position:616795:-1
position: 616795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SP2
product: Sp2 transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537092.1
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: complement(join(616558..616795,617119..617312,617395..617569,619445..619739,620254..621207,621845..621920,624034..624055))
location: region:616558-624055:-1
so has part: feature:624034-624055:-1:exon
so has part: feature:621845-621920:-1:exon
so has part: feature:620254-621207:-1:exon
so has part: feature:619445-619739:-1:exon
so has part: feature:617395-617569:-1:exon
so has part: feature:617119-617312:-1:exon
so has part: feature:616558-616795:-1:exon

position:624055:-1
position: 624055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624034-624055:-1:exon

position:624034:-1
position: 624034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621845-621920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620254-621207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619445-619739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617395-617569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617119-617312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616558-616795:-1:exon

SP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp2
translation: MAATAAVSPSEYLQPAASSAQDSQPSPLALLAATCSKIGPPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLGSGKNNFGILSSKGNLFQLQGSQVGTSYAGGQLVFAIQNPAVINKGPRAAANIQYQAVPQIQPAGAQAIQVQPNLANQIQIIPGANQAILAPSSSSHKPVPIKPAPAQKGGASPVQGASGVVKLSGGSNVTLALPVNNLVSAAEPGTQAQIVAESPSKPGKKPRKKAVSPGQPAALAVAEQVETVLIETTAENIIQAGNNLLIVQSPGSGQPAVVQQVQVVQPKQEPQVVQIPQQALRVVQAASATLPTVPQKPSQNFQIQTTDPAPTQVYFKTPSGELQTVLLQEAPAVTVAPSGTSCSSPVSRSPGGGSKKPATRKERPLPKIAPAGGVISLSAAQLAAAAQAMQTININGVQVQGVPVTITNSGGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQALAGEAQPGEKRRRMACTCPNCKDGDKRPGDQGKKKHICHIPECGRTFRKTSLLRAHVRLHTGERPFVCNWVFCGKRFTRSDELQRHARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHLVTKNL
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: complement(join(616695..616795,617119..617312,617395..617569,619445..619739,620254..621207,621845..621907))
location: region:616695-621907:-1
so has part: feature:621845-621907:-1:exon
so has part: feature:620254-621207:-1:exon
so has part: feature:619445-619739:-1:exon
so has part: feature:617395-617569:-1:exon
so has part: feature:617119-617312:-1:exon
so has part: feature:616695-616795:-1:exon

XP_040393025.1
type: Protein
SIO_000068: ncbiprotein

position:616695:-1
position: 616695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621907:-1
position: 621907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621845-621907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620254-621207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619445-619739:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617395-617569:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617119-617312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616695-616795:-1:exon

SP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp2
translation: MAATAAVSPSEYLQPAASSAQDSQPSPLALLAATCSKIGPPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLGSGKNNFGILSSKGNLFQLQGSQVGTSYAGGQLVFAIQNPAVINKGPRAAANIQYQAVPQIQPAGAQAIQVQPNLANQIQIIPGANQAILAPSSSSHKPVPIKPAPAQKGGASPVQGASGVVKLSGGSNVTLALPVNNLVSAAEPGTQAQIVAESPSKPGKKPRKKAVSPGQPAALAVAEQVETVLIETTAENIIQAGNNLLIVQSPGSGQPAVVQQVQVVQPKQEPQVVQIPQQALRVVQAASATLPTVPQKPSQNFQIQTTDPAPTQVYFKTPSGELQTVLLQEAPAVTVAPSGTSCSSPVSRSPGGGSKKPATRKERPLPKIAPAGGVISLSAAQLAAAAQAMQTININGVQVQGVPVTITNSGGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQALAGEAQPGEKRRRMACTCPNCKDGDKRPGDQGKKKHICHIPECGRTFRKTSLLRAHVRLHTGERPFVCNWVFCGKRFTRSDELQRHARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHLVTKNL
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: complement(join(616695..616795,617119..617312,617395..617569,619445..619739,620254..621207,621845..621907))
location: region:616695-621907:-1
so has part: feature:621845-621907:-1:exon
so has part: feature:620254-621207:-1:exon
so has part: feature:619445-619739:-1:exon
so has part: feature:617395-617569:-1:exon
so has part: feature:617119-617312:-1:exon
so has part: feature:616695-616795:-1:exon

XP_040393026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621845-621907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620254-621207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619445-619739:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617395-617569:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617119-617312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616695-616795:-1:exon

SP6
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 631490..635891
location: region:631490-635891:1
so has part: feature:631490-635891:1:exon
subclass of: SO_0000010

121059893
type: Gene
SIO_000068: ncbigene

position:631490:1
position: 631490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635891:1
position: 635891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631490-635891:1:exon

SP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SP6
product: Sp6 transcription factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040537093.1
SIO_010081: SP6
subclass of: SO_0000673
so part of: SP6
location: join(631490..631690,634078..635891)
location: region:631490-635891:1
so has part: feature:631490-631690:1:exon
so has part: feature:634078-635891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631490-631690:1:exon

position:631690:1
position: 631690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634078-635891:1:exon

position:634078:1
position: 634078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SP6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor Sp6
translation: MLTAVCGSLGNQSSDAPRASPTHLDLQPLQPFQPHGSAAAGADFASPLPPPELPLAGPDAAFAAPGAYEPHGPPRLELPPDGPAAPGSYAKLLQAAPDMAHPYEPWFRPPHPGPPGEEGGVNWWDLHAGASWMELPHGQGGLQVPAPPGLQPPLGGVGGGEPQLCAPPAHLLPPAQHLLGPEGAKALEGPPEAEGGGRAKGGRRAVPRGGGQAACRCPNCQEAERGGPCPEGAKRKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNWLFCGKRFTRSDELQRHLQTHTGTKKFTCPVCGRVFMRSDHLGKHMKTHDGGKDGGEPEAKGAGEPPAGKGGKREPEGGNAAPTN
SIO_010081: SP6
subclass of: SO_0000673
so part of: SP6
location: 634114..635188
location: region:634114-635188:1
so has part: feature:634114-635188:1:exon

XP_040393027.1
type: Protein
SIO_000068: ncbiprotein

position:634114:1
position: 634114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635188:1
position: 635188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634114-635188:1:exon

SCRN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SCRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 637925..640517
location: region:637925-640517:1
so has part: feature:637925-640517:1:exon
subclass of: SO_0000010

121059894
type: Gene
SIO_000068: ncbigene

position:637925:1
position: 637925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640517:1
position: 640517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637925-640517:1:exon

SCRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SCRN2
product: secernin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537094.1
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: join(637925..638390,638468..638649,638722..638921,639055..639270,639408..639573,639695..639872,639983..640517)
location: region:637925-640517:1
so has part: feature:637925-638390:1:exon
so has part: feature:638468-638649:1:exon
so has part: feature:638722-638921:1:exon
so has part: feature:639055-639270:1:exon
so has part: feature:639408-639573:1:exon
so has part: feature:639695-639872:1:exon
so has part: feature:639983-640517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:637925-638390:1:exon

position:638390:1
position: 638390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638468-638649:1:exon

position:638468:1
position: 638468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638649:1
position: 638649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638722-638921:1:exon

position:638722:1
position: 638722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638921:1
position: 638921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:639055-639270:1:exon

position:639055:1
position: 639055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639270:1
position: 639270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:639408-639573:1:exon

position:639408:1
position: 639408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639573:1
position: 639573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:639695-639872:1:exon

position:639695:1
position: 639695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639872:1
position: 639872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:639983-640517:1:exon

position:639983:1
position: 639983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SCRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secernin-2
translation: MAGQGPAPSSCDCFVALPPHTAAPAVIFGKNADRPRREVQEIVYVPAATHRPGDRVQCTYIEIEQAERTHAVVLSRPAWLWGAEMGANEHGVCVGNEGVWTREPVGEDEALLGMDLVRLGLERGSSAREALEVITALLERHGQGGSCKEEPVPFVYHNTFLLADRGEAWVLETAGRYWAAQRIQEGSRNISNQLSIGTDITAEHAELRQRARSQGWWSGAGEFSFAEAFSLEQQPPRMEAAKARYRAGKELLRQHAGHITAETFMAILRDKASGICVDSEGFRTAGSMVSVLPRDPALPCVHFFTATPDPSRSVFKPFVFVAGLKPAPQVMSPSFSDDPAKKVPRFQSTVDRRHELYRRHQAALELMDRDQEQGQKLQQTLRDLERQGLEAVNALLGGDVAPSPEELAELFFDCVDAEMKFYK
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: join(638220..638390,638468..638649,638722..638921,639055..639270,639408..639573,639695..639872,639983..640141)
location: region:638220-640141:1
so has part: feature:638220-638390:1:exon
so has part: feature:638468-638649:1:exon
so has part: feature:638722-638921:1:exon
so has part: feature:639055-639270:1:exon
so has part: feature:639408-639573:1:exon
so has part: feature:639695-639872:1:exon
so has part: feature:639983-640141:1:exon

XP_040393028.1
type: Protein
SIO_000068: ncbiprotein

position:638220:1
position: 638220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640141:1
position: 640141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638220-638390:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638468-638649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638722-638921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639055-639270:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639408-639573:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639695-639872:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639983-640141:1:exon

LRRC46
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LRRC46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(640910..643237)
location: region:640910-643237:-1
so has part: feature:640910-643237:-1:exon
subclass of: SO_0000010

121059897
type: Gene
SIO_000068: ncbigene

position:640910:-1
position: 640910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643237:-1
position: 643237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640910-643237:-1:exon

LRRC46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LRRC46
product: leucine rich repeat containing 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040537096.1
SIO_010081: LRRC46
subclass of: SO_0000673
so part of: LRRC46
location: complement(join(640910..641212,641425..641494,642143..642312,642469..642515,643135..643237))
location: region:640910-643237:-1
so has part: feature:643135-643237:-1:exon
so has part: feature:642469-642515:-1:exon
so has part: feature:642143-642312:-1:exon
so has part: feature:641425-641494:-1:exon
so has part: feature:640910-641212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643135-643237:-1:exon

position:643135:-1
position: 643135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:642469-642515:-1:exon

position:642469:-1
position: 642469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642515:-1
position: 642515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642143-642312:-1:exon

position:642143:-1
position: 642143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642312:-1
position: 642312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641425-641494:-1:exon

position:641425:-1
position: 641425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641494:-1
position: 641494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:640910-641212:-1:exon

position:641212:-1
position: 641212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LRRC46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 46
translation: MAGRDRARPGAELGGLQGVHGLGLRPNRIEKIENLGCFPSLRPARHLAGAAAPTPAVPVLRRFLSLAGNCIRKAENLRPLQHLRFLDLSQNQIQTLDPDEPPRSLRLLDLTGNACTRQPGYREPVVGALPHLLQLDTRPLRGCTDPAPGEEEEEEGSSSSEDDEELFSEPSAPFTADKGARAEAGHTACVGDKQASPPVPRGGSRGRGLGWPRQAPL
SIO_010081: LRRC46
subclass of: SO_0000673
so part of: LRRC46
location: complement(join(640924..641212,641425..641494,642143..642312,642469..642515,643135..643212))
location: region:640924-643212:-1
so has part: feature:643135-643212:-1:exon
so has part: feature:642469-642515:-1:exon
so has part: feature:642143-642312:-1:exon
so has part: feature:641425-641494:-1:exon
so has part: feature:640924-641212:-1:exon

XP_040393030.1
type: Protein
SIO_000068: ncbiprotein

position:640924:-1
position: 640924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643212:-1
position: 643212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643135-643212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:642469-642515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642143-642312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641425-641494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:640924-641212:-1:exon

MRPL10
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MRPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 643323..645603
location: region:643323-645603:1
so has part: feature:643323-645603:1:exon
subclass of: SO_0000010

121059896
type: Gene
SIO_000068: ncbigene

position:643323:1
position: 643323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645603:1
position: 645603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643323-645603:1:exon

MRPL10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MRPL10
product: mitochondrial ribosomal protein L10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040537095.1
SIO_010081: MRPL10
subclass of: SO_0000673
so part of: MRPL10
location: join(643323..643435,643791..643960,644233..644397,644489..644633,644956..645603)
location: region:643323-645603:1
so has part: feature:643323-643435:1:exon
so has part: feature:643791-643960:1:exon
so has part: feature:644233-644397:1:exon
so has part: feature:644489-644633:1:exon
so has part: feature:644956-645603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643323-643435:1:exon

position:643435:1
position: 643435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643791-643960:1:exon

position:643791:1
position: 643791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643960:1
position: 643960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:644233-644397:1:exon

position:644233:1
position: 644233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644397:1
position: 644397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:644489-644633:1:exon

position:644489:1
position: 644489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644633:1
position: 644633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:644956-645603:1:exon

position:644956:1
position: 644956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MRPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L10, mitochondrial
translation: MAALSGGAPWRRGWLPALRLARCSSKAVTRHWKAVHLQRHKLMALTEYLAPRPAVPERCLRPAAEPEEEENGYARLLRRQVEEVFRDSRMIAVCQYNSMPGDDMVLMRHYLRKHNIEVKFFLNEIVRPVLSQSRYKNLLPLFVGRNILLVSPETKAKEMLRVLKGVPQVNLLGACIDNTILSRQGVENFAKLPPLEASQGQTVGALALLPSQTCSLLQHGAAHLTALLDQHIRQLRDGAGEGGTPAGPEPAQSPGAP
SIO_010081: MRPL10
subclass of: SO_0000673
so part of: MRPL10
location: join(643399..643435,643791..643960,644233..644397,644489..644633,644956..645212)
location: region:643399-645212:1
so has part: feature:643399-643435:1:exon
so has part: feature:643791-643960:1:exon
so has part: feature:644233-644397:1:exon
so has part: feature:644489-644633:1:exon
so has part: feature:644956-645212:1:exon

XP_040393029.1
type: Protein
SIO_000068: ncbiprotein

position:643399:1
position: 643399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645212:1
position: 645212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643399-643435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643791-643960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644233-644397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644489-644633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644956-645212:1:exon

OSBPL7
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: OSBPL7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 646067..652757
location: region:646067-652757:1
so has part: feature:646067-652757:1:exon
subclass of: SO_0000010

121059898
type: Gene
SIO_000068: ncbigene

position:646067:1
position: 646067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652757:1
position: 652757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646067-652757:1:exon

OSBPL7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: OSBPL7
product: oxysterol binding protein like 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040537097.1
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: join(646067..646137,646765..646948,647136..647258,647402..647455,647569..647682,647758..647883,647960..648080,648160..648263,648336..648428,648509..648638,648723..648847,649041..649148,649221..649352,649809..649899,649981..650258,650343..650480,650563..650626,650703..650781,650855..650999,651439..651580,651743..651869,651977..652099,652265..652757)
location: region:646067-652757:1
so has part: feature:646067-646137:1:exon
so has part: feature:646765-646948:1:exon
so has part: feature:647136-647258:1:exon
so has part: feature:647402-647455:1:exon
so has part: feature:647569-647682:1:exon
so has part: feature:647758-647883:1:exon
so has part: feature:647960-648080:1:exon
so has part: feature:648160-648263:1:exon
so has part: feature:648336-648428:1:exon
so has part: feature:648509-648638:1:exon
so has part: feature:648723-648847:1:exon
so has part: feature:649041-649148:1:exon
so has part: feature:649221-649352:1:exon
so has part: feature:649809-649899:1:exon
so has part: feature:649981-650258:1:exon
so has part: feature:650343-650480:1:exon
so has part: feature:650563-650626:1:exon
so has part: feature:650703-650781:1:exon
so has part: feature:650855-650999:1:exon
so has part: feature:651439-651580:1:exon
so has part: feature:651743-651869:1:exon
so has part: feature:651977-652099:1:exon
so has part: feature:652265-652757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646067-646137:1:exon

position:646137:1
position: 646137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646765-646948:1:exon

position:646765:1
position: 646765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646948:1
position: 646948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647136-647258:1:exon

position:647136:1
position: 647136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647258:1
position: 647258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647402-647455:1:exon

position:647402:1
position: 647402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647455:1
position: 647455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647569-647682:1:exon

position:647569:1
position: 647569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647682:1
position: 647682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:647758-647883:1:exon

position:647758:1
position: 647758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647883:1
position: 647883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:647960-648080:1:exon

position:647960:1
position: 647960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648080:1
position: 648080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:648160-648263:1:exon

position:648160:1
position: 648160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648263:1
position: 648263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:648336-648428:1:exon

position:648336:1
position: 648336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648428:1
position: 648428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:648509-648638:1:exon

position:648509:1
position: 648509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648638:1
position: 648638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:648723-648847:1:exon

position:648723:1
position: 648723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648847:1
position: 648847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:649041-649148:1:exon

position:649041:1
position: 649041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649148:1
position: 649148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:649221-649352:1:exon

position:649221:1
position: 649221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649352:1
position: 649352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:649809-649899:1:exon

position:649809:1
position: 649809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649899:1
position: 649899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:649981-650258:1:exon

position:649981:1
position: 649981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650258:1
position: 650258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:650343-650480:1:exon

position:650343:1
position: 650343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650480:1
position: 650480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:650563-650626:1:exon

position:650563:1
position: 650563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650626:1
position: 650626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:650703-650781:1:exon

position:650703:1
position: 650703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650781:1
position: 650781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:650855-650999:1:exon

position:650855:1
position: 650855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650999:1
position: 650999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:651439-651580:1:exon

position:651439:1
position: 651439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651580:1
position: 651580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:651743-651869:1:exon

position:651743:1
position: 651743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651869:1
position: 651869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:651977-652099:1:exon

position:651977:1
position: 651977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652099:1
position: 652099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:652265-652757:1:exon

position:652265:1
position: 652265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OSBPL7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: OSBPL7
product: oxysterol binding protein like 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040537099.1
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: join(646067..646137,646765..646948,647136..647258,647402..647455,647569..647682,647758..647883,647960..648080,648160..648263,648336..648428,648509..648638,648723..648847,649041..649148,649221..649352,649809..649899,649987..650258,650343..650480,650563..650626,650703..650781,650855..650999,651439..651580,651743..651869,651977..652099,652265..652757)
location: region:646067-652757:1
so has part: feature:646067-646137:1:exon
so has part: feature:646765-646948:1:exon
so has part: feature:647136-647258:1:exon
so has part: feature:647402-647455:1:exon
so has part: feature:647569-647682:1:exon
so has part: feature:647758-647883:1:exon
so has part: feature:647960-648080:1:exon
so has part: feature:648160-648263:1:exon
so has part: feature:648336-648428:1:exon
so has part: feature:648509-648638:1:exon
so has part: feature:648723-648847:1:exon
so has part: feature:649041-649148:1:exon
so has part: feature:649221-649352:1:exon
so has part: feature:649809-649899:1:exon
so has part: feature:649987-650258:1:exon
so has part: feature:650343-650480:1:exon
so has part: feature:650563-650626:1:exon
so has part: feature:650703-650781:1:exon
so has part: feature:650855-650999:1:exon
so has part: feature:651439-651580:1:exon
so has part: feature:651743-651869:1:exon
so has part: feature:651977-652099:1:exon
so has part: feature:652265-652757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646067-646137:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646765-646948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647136-647258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647402-647455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647569-647682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647758-647883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647960-648080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648160-648263:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648336-648428:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648509-648638:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:648723-648847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:649041-649148:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:649221-649352:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:649809-649899:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:649987-650258:1:exon

position:649987:1
position: 649987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:650343-650480:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:650563-650626:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:650703-650781:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:650855-650999:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:651439-651580:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:651743-651869:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:651977-652099:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:652265-652757:1:exon

OSBPL7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: OSBPL7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 7 isoform X1
translation: MGSHEKDPASPRRALSRSNSTVSSKHSSVQQGSESWEVVEEPRGRGSPCREPPRQEGFLLKKRKWPLKGWHKRYFVLENGILTYATTRQDVLKGKLHGAIDVRQSVMSVNKKAQRVDLDTEDNIYHLKIKSPELFASWVSSLCSHHQGERPDPLACPSGGPAGRTPSAAQGPWTRILPSGSAPALSALASSRDKVDAWLKDSEGLERCSAELSACQEQLRELTGMLQSLESLHRIPSAPLISSGQPSAAAERPKKGRRSTRIWCTQSFAKDDSIGRVGRLHGSVPNLSRYLEPCQGQLPFSLPPEYSQLQRSFWVLAQKVHGSLSSVVAALTAERARLEEMRQALDRRRSAPRPGSAGPTGAALPSLEPRDGLRRFHSLSVSSDTTLDSFASLHPDEPDALPAKGREQQRSQRSIASLADSHTEFFDACEVFLSASSSENEASDDESCISEATNSICEDPAEPGGPGHPQTGADSPGGPAELPPLELPGPGPQRRSRLPAPPAPPGDVSLWGLLRSSVGKDLSRVALPVQLNEPLNTLQRLCEELEYSALLDRAARARDPRQRLVFVAAFAVSAYASTFYRAGSKPFNPVLGETYECVRPDRGFRFISEQVCHHPPISACHAESDNFVFWQDMRWKNKFWGKSLEIVPMGTVNVQLPRSGDHFEWNKVTTCIHNVLSGPRWIEHYGEVLIRNTRDASYHCKLTFCKARYWGAGANEVQGAVLSRSGTVVERLAGKWHEGLFRGPAPGHCVWRANPMPHDHERNYGFTQFALELNELTPELRRVLPSTDTRLRPDQRYLEEGNVPAAETQKRQIEQLQRDRRRVMEENNITHQARFFRRLTDANGKESWVTNNTYWKLRLDPGFAHLDSAVLW
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: join(646856..646948,647136..647258,647402..647455,647569..647682,647758..647883,647960..648080,648160..648263,648336..648428,648509..648638,648723..648847,649041..649148,649221..649352,649809..649899,649981..650258,650343..650480,650563..650626,650703..650781,650855..650999,651439..651580,651743..651869,651977..652099,652265..652373)
location: region:646856-652373:1
so has part: feature:646856-646948:1:exon
so has part: feature:647136-647258:1:exon
so has part: feature:647402-647455:1:exon
so has part: feature:647569-647682:1:exon
so has part: feature:647758-647883:1:exon
so has part: feature:647960-648080:1:exon
so has part: feature:648160-648263:1:exon
so has part: feature:648336-648428:1:exon
so has part: feature:648509-648638:1:exon
so has part: feature:648723-648847:1:exon
so has part: feature:649041-649148:1:exon
so has part: feature:649221-649352:1:exon
so has part: feature:649809-649899:1:exon
so has part: feature:649981-650258:1:exon
so has part: feature:650343-650480:1:exon
so has part: feature:650563-650626:1:exon
so has part: feature:650703-650781:1:exon
so has part: feature:650855-650999:1:exon
so has part: feature:651439-651580:1:exon
so has part: feature:651743-651869:1:exon
so has part: feature:651977-652099:1:exon
so has part: feature:652265-652373:1:exon

XP_040393031.1
type: Protein
SIO_000068: ncbiprotein

position:646856:1
position: 646856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652373:1
position: 652373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646856-646948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647136-647258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647402-647455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647569-647682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647758-647883:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647960-648080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:648160-648263:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648336-648428:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648509-648638:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648723-648847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:649041-649148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:649221-649352:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:649809-649899:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:649981-650258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650343-650480:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:650563-650626:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:650703-650781:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:650855-650999:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:651439-651580:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:651743-651869:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:651977-652099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:652265-652373:1:exon

OSBPL7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: OSBPL7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 7 isoform X2
translation: MGSHEKDPASPRRALSRSNSTVSSKHSSVQQGSESWEVVEEPRGRGSPCREPPRQEGFLLKKRKWPLKGWHKRYFVLENGILTYATTRQDVLKGKLHGAIDVRQSVMSVNKKAQRVDLDTEDNIYHLKIKSPELFASWVSSLCSHHQGERPDPLACPSGGPAGRTPSAAQGPWTRILPSGSAPALSALASSRDKVDAWLKDSEGLERCSAELSACQEQLRELTGMLQSLESLHRIPSAPLISSGQPSAAAERPKKGRRSTRIWCTQSFAKDDSIGRVGRLHGSVPNLSRYLEPCQGQLPFSLPPEYSQLQRSFWVLAQKVHGSLSSVVAALTAERARLEEMRQALDRRRSAPRPGSAGPTGAALPSLEPRDGLRRFHSLSVSSDTTLDSFASLHPDEPDALPAKGREQQRSQRSIASLADSHTEFFDACEVFLSASSSENEASDDESCISEATNSICEDPAEPGGPGHPQTDSPGGPAELPPLELPGPGPQRRSRLPAPPAPPGDVSLWGLLRSSVGKDLSRVALPVQLNEPLNTLQRLCEELEYSALLDRAARARDPRQRLVFVAAFAVSAYASTFYRAGSKPFNPVLGETYECVRPDRGFRFISEQVCHHPPISACHAESDNFVFWQDMRWKNKFWGKSLEIVPMGTVNVQLPRSGDHFEWNKVTTCIHNVLSGPRWIEHYGEVLIRNTRDASYHCKLTFCKARYWGAGANEVQGAVLSRSGTVVERLAGKWHEGLFRGPAPGHCVWRANPMPHDHERNYGFTQFALELNELTPELRRVLPSTDTRLRPDQRYLEEGNVPAAETQKRQIEQLQRDRRRVMEENNITHQARFFRRLTDANGKESWVTNNTYWKLRLDPGFAHLDSAVLW
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: join(646856..646948,647136..647258,647402..647455,647569..647682,647758..647883,647960..648080,648160..648263,648336..648428,648509..648638,648723..648847,649041..649148,649221..649352,649809..649899,649987..650258,650343..650480,650563..650626,650703..650781,650855..650999,651439..651580,651743..651869,651977..652099,652265..652373)
location: region:646856-652373:1
so has part: feature:646856-646948:1:exon
so has part: feature:647136-647258:1:exon
so has part: feature:647402-647455:1:exon
so has part: feature:647569-647682:1:exon
so has part: feature:647758-647883:1:exon
so has part: feature:647960-648080:1:exon
so has part: feature:648160-648263:1:exon
so has part: feature:648336-648428:1:exon
so has part: feature:648509-648638:1:exon
so has part: feature:648723-648847:1:exon
so has part: feature:649041-649148:1:exon
so has part: feature:649221-649352:1:exon
so has part: feature:649809-649899:1:exon
so has part: feature:649987-650258:1:exon
so has part: feature:650343-650480:1:exon
so has part: feature:650563-650626:1:exon
so has part: feature:650703-650781:1:exon
so has part: feature:650855-650999:1:exon
so has part: feature:651439-651580:1:exon
so has part: feature:651743-651869:1:exon
so has part: feature:651977-652099:1:exon
so has part: feature:652265-652373:1:exon

XP_040393033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:646856-646948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647136-647258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647402-647455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647569-647682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647758-647883:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647960-648080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:648160-648263:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648336-648428:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648509-648638:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648723-648847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:649041-649148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:649221-649352:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:649809-649899:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:649987-650258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:650343-650480:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:650563-650626:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:650703-650781:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:650855-650999:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:651439-651580:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:651743-651869:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:651977-652099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:652265-652373:1:exon

TBX21
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TBX21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(653094..661341)
location: region:653094-661341:-1
so has part: feature:653094-661341:-1:exon
subclass of: SO_0000010

121059899
type: Gene
SIO_000068: ncbigene

position:653094:-1
position: 653094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661341:-1
position: 661341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653094-661341:-1:exon

TBX21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TBX21
product: T-box transcription factor 21
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537100.1
SIO_010081: TBX21
subclass of: SO_0000673
so part of: TBX21
location: complement(join(653094..654013,654116..654177,654719..654877,654973..655094,655177..655331,660836..661341))
location: region:653094-661341:-1
so has part: feature:660836-661341:-1:exon
so has part: feature:655177-655331:-1:exon
so has part: feature:654973-655094:-1:exon
so has part: feature:654719-654877:-1:exon
so has part: feature:654116-654177:-1:exon
so has part: feature:653094-654013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660836-661341:-1:exon

position:660836:-1
position: 660836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655177-655331:-1:exon

position:655177:-1
position: 655177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655331:-1
position: 655331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654973-655094:-1:exon

position:654973:-1
position: 654973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655094:-1
position: 655094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:654719-654877:-1:exon

position:654719:-1
position: 654719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654877:-1
position: 654877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654116-654177:-1:exon

position:654116:-1
position: 654116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654177:-1
position: 654177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:653094-654013:-1:exon

position:654013:-1
position: 654013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBX21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TBX21
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: T-box transcription factor TBX21
translation: MGALEPAAGAPRAALPMLSGAASFAKEPPGARDAAAAAAYYGEPGAPEPPVPPLPYGAPPVPGGFGGGGGRFLGPCPPYRAPPPAAAPAAGTGYAAAAGEGYAGAELYGGAEGAYGPGGAPPLCPRAGQLCALPGYRAAGKVQVMLNNFPLWAKFHKHQTEMIITKQGRRMFPFLSFNLSGLNPVAHYSVCVDVVLVDQHHWRYQGGKWVQCGKAEGNMPGNRLYLHPDSPNTGAHWMRQEVSFGKLKLTNNKGAANNVGQMIVLQSLHKYQPRLHVTEVKEGEGEAPCPSPHTHTFAFPETQFIAVTAYQNADITQLKIDHNPFAKGFRDNFDSMYAASEGDRLTPSPPDAPGCPQLLPGPRFQPFLQEQYPLPPGRFYNGERGPPLPLPPKDPPRWYFAPQQPPAGALEFGGYEGGYGGGKLVPYGVKPFALPPATHPPLPYYPEGPAAFGGPGAWGPGQYVPKGSPGTLGWYREPREEKCKEAEGWTPEPPVAKPGEAAEPGLYEAGCKRRRVSPYPSSAESSPPPATGTSTTRSRALTAATTASTGTEPRRWGGHRPPPPPPPHARHPKKCRAPQSHGSKNPSGAGAKPRAGHP
SIO_010081: TBX21
subclass of: SO_0000673
so part of: TBX21
location: complement(join(653220..654013,654116..654177,654719..654877,654973..655094,655177..655331,660836..661341))
location: region:653220-661341:-1
so has part: feature:660836-661341:-1:exon
so has part: feature:655177-655331:-1:exon
so has part: feature:654973-655094:-1:exon
so has part: feature:654719-654877:-1:exon
so has part: feature:654116-654177:-1:exon
so has part: feature:653220-654013:-1:exon

XP_040393034.1
type: Protein
SIO_000068: ncbiprotein

position:653220:-1
position: 653220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660836-661341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655177-655331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654973-655094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654719-654877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654116-654177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:653220-654013:-1:exon

TBKBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TBKBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(672952..682963)
location: region:672952-682963:-1
so has part: feature:672952-682963:-1:exon
subclass of: SO_0000010

121059900
type: Gene
SIO_000068: ncbigene

position:672952:-1
position: 672952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682963:-1
position: 682963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672952-682963:-1:exon

TBKBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TBKBP1
product: TBK1 binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040537102.1
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(672952..673585,673805..674544,674806..674924,679776..679825,679901..680079,680176..680329,680593..680697,680774..680896,680974..681210,682668..682963))
location: region:672952-682963:-1
so has part: feature:682668-682963:-1:exon
so has part: feature:680974-681210:-1:exon
so has part: feature:680774-680896:-1:exon
so has part: feature:680593-680697:-1:exon
so has part: feature:680176-680329:-1:exon
so has part: feature:679901-680079:-1:exon
so has part: feature:679776-679825:-1:exon
so has part: feature:674806-674924:-1:exon
so has part: feature:673805-674544:-1:exon
so has part: feature:672952-673585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:682668-682963:-1:exon

position:682668:-1
position: 682668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680974-681210:-1:exon

position:680974:-1
position: 680974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681210:-1
position: 681210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:680774-680896:-1:exon

position:680774:-1
position: 680774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680896:-1
position: 680896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:680593-680697:-1:exon

position:680593:-1
position: 680593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680697:-1
position: 680697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:680176-680329:-1:exon

position:680176:-1
position: 680176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680329:-1
position: 680329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:679901-680079:-1:exon

position:679901:-1
position: 679901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680079:-1
position: 680079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:679776-679825:-1:exon

position:679776:-1
position: 679776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679825:-1
position: 679825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:674806-674924:-1:exon

position:674806:-1
position: 674806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674924:-1
position: 674924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:673805-674544:-1:exon

position:673805:-1
position: 673805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674544:-1
position: 674544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:672952-673585:-1:exon

position:673585:-1
position: 673585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBKBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TBKBP1
product: TBK1 binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537101.1
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(672952..673585,673805..674544,674806..674924,679776..679825,679901..680079,680176..680329,680593..680697,680774..680896,680974..681839))
location: region:672952-681839:-1
so has part: feature:680974-681839:-1:exon
so has part: feature:680774-680896:-1:exon
so has part: feature:680593-680697:-1:exon
so has part: feature:680176-680329:-1:exon
so has part: feature:679901-680079:-1:exon
so has part: feature:679776-679825:-1:exon
so has part: feature:674806-674924:-1:exon
so has part: feature:673805-674544:-1:exon
so has part: feature:672952-673585:-1:exon

position:681839:-1
position: 681839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680974-681839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680774-680896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:680593-680697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:680176-680329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679901-680079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679776-679825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674806-674924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673805-674544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:672952-673585:-1:exon

TBKBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TBKBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TANK-binding kinase 1-binding protein 1 isoform X1
translation: MPAPALLPSILGCCSSPAPSLLWAGEVTRGPCPPAAIGRDLSPPACPAALQLRGRLSCCGRICPRLTAGCSRPPRQDSCGAMDSMFEDDISILTQEALGPDEDWLDSPNTDLSGEMCSASHFALITAYDDIKNRLTGLERENSTLKRRLKMYEVKYPLIGEFGEERIFSVYEAKETSLLKSEKASLQQQLNQFQHELQKSKEREEQLDEMIQAYEKLCVEKADLESELGEMRALVETHLSRIRSLEQQLRQRDGGAFPGLGAPLPGQEVPFLSLHPNPALSHVLDRPAGWPSRGLEAPGRLEAELEAARQEAQRAQHREEHLKAECERLQAELKHLQDTREQEQSERDMAWVKKMGDDQVNLALAYTELTEELCRLRNLSSLQSQILRALLQEKSLNGGQRHSPLSQCHSPAQQRRSPAPQCPSPAPGRSPAPQCQSPALQRRSPAPQCQSPAQQRRSPAPGPCQSPAQQRRSPVPTSSPSPAQQRRSPAPPPCPSPASASPHRLPGERMELGYAKPSSRHIKAGFQGRRSYSEVSNVALYQQSRSLWLQPEASTLPKHRPYGEVYLGGTGAPLSAREPFEEHVRFEKQSSDEEDWAVPSPPSPEVGAVRCASFCAGFPIPDAAAHRAAAAYARTEHAQSWPSINLLMETVDSEIRSCPLCQLAFPIGYPDDALIKHIDSHLENSKI
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(673457..673585,673805..674544,674806..674924,679776..679825,679901..680079,680176..680329,680593..680697,680774..680896,680974..681438))
location: region:673457-681438:-1
so has part: feature:680974-681438:-1:exon
so has part: feature:680774-680896:-1:exon
so has part: feature:680593-680697:-1:exon
so has part: feature:680176-680329:-1:exon
so has part: feature:679901-680079:-1:exon
so has part: feature:679776-679825:-1:exon
so has part: feature:674806-674924:-1:exon
so has part: feature:673805-674544:-1:exon
so has part: feature:673457-673585:-1:exon

XP_040393035.1
type: Protein
SIO_000068: ncbiprotein

position:673457:-1
position: 673457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681438:-1
position: 681438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680974-681438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680774-680896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:680593-680697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:680176-680329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679901-680079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679776-679825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674806-674924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673805-674544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673457-673585:-1:exon

TBKBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TBKBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TANK-binding kinase 1-binding protein 1 isoform X2
translation: MDSMFEDDISILTQEALGPDEDWLDSPNTDLSGEMCSASHFALITAYDDIKNRLTGLERENSTLKRRLKMYEVKYPLIGEFGEERIFSVYEAKETSLLKSEKASLQQQLNQFQHELQKSKEREEQLDEMIQAYEKLCVEKADLESELGEMRALVETHLSRIRSLEQQLRQRDGGAFPGLGAPLPGQEVPFLSLHPNPALSHVLDRPAGWPSRGLEAPGRLEAELEAARQEAQRAQHREEHLKAECERLQAELKHLQDTREQEQSERDMAWVKKMGDDQVNLALAYTELTEELCRLRNLSSLQSQILRALLQEKSLNGGQRHSPLSQCHSPAQQRRSPAPQCPSPAPGRSPAPQCQSPALQRRSPAPQCQSPAQQRRSPAPGPCQSPAQQRRSPVPTSSPSPAQQRRSPAPPPCPSPASASPHRLPGERMELGYAKPSSRHIKAGFQGRRSYSEVSNVALYQQSRSLWLQPEASTLPKHRPYGEVYLGGTGAPLSAREPFEEHVRFEKQSSDEEDWAVPSPPSPEVGAVRCASFCAGFPIPDAAAHRAAAAYARTEHAQSWPSINLLMETVDSEIRSCPLCQLAFPIGYPDDALIKHIDSHLENSKI
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: complement(join(673457..673585,673805..674544,674806..674924,679776..679825,679901..680079,680176..680329,680593..680697,680774..680896,680974..681195))
location: region:673457-681195:-1
so has part: feature:680974-681195:-1:exon
so has part: feature:680774-680896:-1:exon
so has part: feature:680593-680697:-1:exon
so has part: feature:680176-680329:-1:exon
so has part: feature:679901-680079:-1:exon
so has part: feature:679776-679825:-1:exon
so has part: feature:674806-674924:-1:exon
so has part: feature:673805-674544:-1:exon
so has part: feature:673457-673585:-1:exon

XP_040393036.1
type: Protein
SIO_000068: ncbiprotein

position:681195:-1
position: 681195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680974-681195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680774-680896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:680593-680697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:680176-680329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679901-680079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679776-679825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674806-674924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673805-674544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673457-673585:-1:exon

KPNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(688542..711942)
location: region:688542-711942:-1
so has part: feature:688542-711942:-1:exon
subclass of: SO_0000010

121059901
type: Gene
SIO_000068: ncbigene

position:688542:-1
position: 688542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711942:-1
position: 711942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688542-711942:-1:exon

KPNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KPNB1
product: karyopherin subunit beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537103.1
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: complement(join(688542..689827,690385..690546,691169..691283,691625..691730,691835..691978,692236..692343,692963..693045,694735..694879,697155..697226,697501..697648,698831..698961,700228..700419,700639..700863,701983..702084,703313..703423,703859..703948,704321..704380,705462..705614,707564..707764,709511..709693,711445..711503,711787..711942))
location: region:688542-711942:-1
so has part: feature:711787-711942:-1:exon
so has part: feature:711445-711503:-1:exon
so has part: feature:709511-709693:-1:exon
so has part: feature:707564-707764:-1:exon
so has part: feature:705462-705614:-1:exon
so has part: feature:704321-704380:-1:exon
so has part: feature:703859-703948:-1:exon
so has part: feature:703313-703423:-1:exon
so has part: feature:701983-702084:-1:exon
so has part: feature:700639-700863:-1:exon
so has part: feature:700228-700419:-1:exon
so has part: feature:698831-698961:-1:exon
so has part: feature:697501-697648:-1:exon
so has part: feature:697155-697226:-1:exon
so has part: feature:694735-694879:-1:exon
so has part: feature:692963-693045:-1:exon
so has part: feature:692236-692343:-1:exon
so has part: feature:691835-691978:-1:exon
so has part: feature:691625-691730:-1:exon
so has part: feature:691169-691283:-1:exon
so has part: feature:690385-690546:-1:exon
so has part: feature:688542-689827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711787-711942:-1:exon

position:711787:-1
position: 711787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:711445-711503:-1:exon

position:711445:-1
position: 711445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711503:-1
position: 711503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:709511-709693:-1:exon

position:709511:-1
position: 709511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709693:-1
position: 709693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:707564-707764:-1:exon

position:707564:-1
position: 707564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707764:-1
position: 707764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:705462-705614:-1:exon

position:705462:-1
position: 705462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705614:-1
position: 705614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:704321-704380:-1:exon

position:704321:-1
position: 704321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704380:-1
position: 704380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:703859-703948:-1:exon

position:703859:-1
position: 703859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703948:-1
position: 703948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:703313-703423:-1:exon

position:703313:-1
position: 703313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703423:-1
position: 703423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:701983-702084:-1:exon

position:701983:-1
position: 701983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702084:-1
position: 702084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:700639-700863:-1:exon

position:700639:-1
position: 700639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700863:-1
position: 700863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:700228-700419:-1:exon

position:700228:-1
position: 700228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700419:-1
position: 700419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:698831-698961:-1:exon

position:698831:-1
position: 698831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698961:-1
position: 698961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:697501-697648:-1:exon

position:697501:-1
position: 697501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697648:-1
position: 697648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:697155-697226:-1:exon

position:697155:-1
position: 697155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697226:-1
position: 697226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:694735-694879:-1:exon

position:694735:-1
position: 694735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694879:-1
position: 694879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:692963-693045:-1:exon

position:692963:-1
position: 692963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693045:-1
position: 693045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:692236-692343:-1:exon

position:692236:-1
position: 692236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692343:-1
position: 692343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:691835-691978:-1:exon

position:691835:-1
position: 691835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691978:-1
position: 691978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:691625-691730:-1:exon

position:691625:-1
position: 691625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691730:-1
position: 691730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:691169-691283:-1:exon

position:691169:-1
position: 691169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691283:-1
position: 691283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:690385-690546:-1:exon

position:690385:-1
position: 690385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690546:-1
position: 690546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:688542-689827:-1:exon

position:689827:-1
position: 689827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KPNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit beta-1
translation: MELITILEKTVSPDRSELEAAQKFLEQAAIENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEIPMSQWPELIPQLVANVTNQHSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTVGRICEMLPEAAINDIYLAPLLQCLIEGLSAEPRVASNVCWAFTSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYEALMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMDAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLDVVLNTLQQASQAQVDKSDYDMVDYLNELREGCLEAYTGIIQGLKGDQENVHPDVMLVQPRVEFILSYIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKTKTLATWATKELRKLKNQA
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: complement(join(689827,690385..690546,691169..691283,691625..691730,691835..691978,692236..692343,692963..693045,694735..694879,697155..697226,697501..697648,698831..698961,700228..700419,700639..700863,701983..702084,703313..703423,703859..703948,704321..704380,705462..705614,707564..707764,709511..709693,711445..711503,711787..711826))
location: region:689827-711826:-1
so has part: feature:711787-711826:-1:exon
so has part: feature:711445-711503:-1:exon
so has part: feature:709511-709693:-1:exon
so has part: feature:707564-707764:-1:exon
so has part: feature:705462-705614:-1:exon
so has part: feature:704321-704380:-1:exon
so has part: feature:703859-703948:-1:exon
so has part: feature:703313-703423:-1:exon
so has part: feature:701983-702084:-1:exon
so has part: feature:700639-700863:-1:exon
so has part: feature:700228-700419:-1:exon
so has part: feature:698831-698961:-1:exon
so has part: feature:697501-697648:-1:exon
so has part: feature:697155-697226:-1:exon
so has part: feature:694735-694879:-1:exon
so has part: feature:692963-693045:-1:exon
so has part: feature:692236-692343:-1:exon
so has part: feature:691835-691978:-1:exon
so has part: feature:691625-691730:-1:exon
so has part: feature:691169-691283:-1:exon
so has part: feature:690385-690546:-1:exon
so has part: feature:689827-689827:-1:exon

XP_040393037.1
type: Protein
SIO_000068: ncbiprotein

position:711826:-1
position: 711826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711787-711826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711445-711503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709511-709693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707564-707764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705462-705614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704321-704380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703859-703948:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703313-703423:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:701983-702084:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:700639-700863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:700228-700419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:698831-698961:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:697501-697648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:697155-697226:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:694735-694879:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:692963-693045:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:692236-692343:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:691835-691978:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691625-691730:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691169-691283:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:690385-690546:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:689827-689827:-1:exon

NPEPPS
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(715321..751483)
location: region:715321-751483:-1
so has part: feature:715321-751483:-1:exon
subclass of: SO_0000010

121059902
type: Gene
SIO_000068: ncbigene

position:715321:-1
position: 715321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751483:-1
position: 751483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715321-751483:-1:exon

NPEPPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NPEPPS
product: aminopeptidase puromycin sensitive, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 266 long SRA reads, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537104.1
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: complement(join(715321..716690,718525..718572,718674..718829,719049..719156,719647..719703,720299..720441,721037..721256,722386..722520,724086..724225,724636..724699,725435..725544,726333..726393,726767..726871,727265..727429,729716..729830,731276..731309,731415..731511,731970..732170,733098..733205,734112..734233,735609..735686,742587..742671,751044..751483))
location: region:715321-751483:-1
so has part: feature:751044-751483:-1:exon
so has part: feature:742587-742671:-1:exon
so has part: feature:735609-735686:-1:exon
so has part: feature:734112-734233:-1:exon
so has part: feature:733098-733205:-1:exon
so has part: feature:731970-732170:-1:exon
so has part: feature:731415-731511:-1:exon
so has part: feature:731276-731309:-1:exon
so has part: feature:729716-729830:-1:exon
so has part: feature:727265-727429:-1:exon
so has part: feature:726767-726871:-1:exon
so has part: feature:726333-726393:-1:exon
so has part: feature:725435-725544:-1:exon
so has part: feature:724636-724699:-1:exon
so has part: feature:724086-724225:-1:exon
so has part: feature:722386-722520:-1:exon
so has part: feature:721037-721256:-1:exon
so has part: feature:720299-720441:-1:exon
so has part: feature:719647-719703:-1:exon
so has part: feature:719049-719156:-1:exon
so has part: feature:718674-718829:-1:exon
so has part: feature:718525-718572:-1:exon
so has part: feature:715321-716690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751044-751483:-1:exon

position:751044:-1
position: 751044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742587-742671:-1:exon

position:742587:-1
position: 742587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742671:-1
position: 742671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:735609-735686:-1:exon

position:735609:-1
position: 735609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735686:-1
position: 735686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:734112-734233:-1:exon

position:734112:-1
position: 734112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734233:-1
position: 734233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:733098-733205:-1:exon

position:733098:-1
position: 733098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733205:-1
position: 733205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:731970-732170:-1:exon

position:731970:-1
position: 731970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732170:-1
position: 732170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:731415-731511:-1:exon

position:731415:-1
position: 731415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731511:-1
position: 731511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:731276-731309:-1:exon

position:731276:-1
position: 731276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731309:-1
position: 731309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:729716-729830:-1:exon

position:729716:-1
position: 729716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729830:-1
position: 729830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:727265-727429:-1:exon

position:727265:-1
position: 727265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727429:-1
position: 727429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:726767-726871:-1:exon

position:726767:-1
position: 726767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726871:-1
position: 726871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:726333-726393:-1:exon

position:726333:-1
position: 726333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726393:-1
position: 726393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:725435-725544:-1:exon

position:725435:-1
position: 725435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725544:-1
position: 725544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:724636-724699:-1:exon

position:724636:-1
position: 724636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724699:-1
position: 724699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:724086-724225:-1:exon

position:724086:-1
position: 724086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724225:-1
position: 724225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:722386-722520:-1:exon

position:722386:-1
position: 722386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722520:-1
position: 722520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:721037-721256:-1:exon

position:721037:-1
position: 721037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721256:-1
position: 721256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:720299-720441:-1:exon

position:720299:-1
position: 720299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720441:-1
position: 720441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:719647-719703:-1:exon

position:719647:-1
position: 719647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719703:-1
position: 719703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:719049-719156:-1:exon

position:719049:-1
position: 719049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719156:-1
position: 719156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:718674-718829:-1:exon

position:718674:-1
position: 718674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718829:-1
position: 718829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:718525-718572:-1:exon

position:718525:-1
position: 718525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718572:-1
position: 718572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:715321-716690:-1:exon

position:716690:-1
position: 716690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPEPPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NPEPPS
product: aminopeptidase puromycin sensitive, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040537105.1
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: complement(join(715321..716690,718525..718572,718674..718829,719049..719156,719647..719703,720299..720441,721037..721256,722386..722520,724086..724225,724636..724699,725435..725544,726333..726393,726767..726871,727265..727429,729716..729830,731276..731309,731415..731511,731970..732170,733098..733205,734112..734233,735609..735686,742587..742671,749679..750034))
location: region:715321-750034:-1
so has part: feature:749679-750034:-1:exon
so has part: feature:742587-742671:-1:exon
so has part: feature:735609-735686:-1:exon
so has part: feature:734112-734233:-1:exon
so has part: feature:733098-733205:-1:exon
so has part: feature:731970-732170:-1:exon
so has part: feature:731415-731511:-1:exon
so has part: feature:731276-731309:-1:exon
so has part: feature:729716-729830:-1:exon
so has part: feature:727265-727429:-1:exon
so has part: feature:726767-726871:-1:exon
so has part: feature:726333-726393:-1:exon
so has part: feature:725435-725544:-1:exon
so has part: feature:724636-724699:-1:exon
so has part: feature:724086-724225:-1:exon
so has part: feature:722386-722520:-1:exon
so has part: feature:721037-721256:-1:exon
so has part: feature:720299-720441:-1:exon
so has part: feature:719647-719703:-1:exon
so has part: feature:719049-719156:-1:exon
so has part: feature:718674-718829:-1:exon
so has part: feature:718525-718572:-1:exon
so has part: feature:715321-716690:-1:exon

position:750034:-1
position: 750034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749679-750034:-1:exon

position:749679:-1
position: 749679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742587-742671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735609-735686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:734112-734233:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733098-733205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731970-732170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:731415-731511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731276-731309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729716-729830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727265-727429:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726767-726871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:726333-726393:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:725435-725544:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724636-724699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:724086-724225:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722386-722520:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:721037-721256:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720299-720441:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:719647-719703:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719049-719156:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:718674-718829:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:718525-718572:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:715321-716690:-1:exon

NPEPPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: puromycin-sensitive aminopeptidase isoform X1
translation: MPEKRPFERLPADVCPLNYGLCLKPDLIDFTFEGKLEAAVQVKHATNQIVMNCADIDIITASYAPEGDEEVHATGFNYQNEDEKVTLSFPSTLQKGTGTLKIDFVGELNDKMKGFYRSKYTTPTGDTRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENLVEVKFARTPIMSTYLVAFVVGEYDFVETRSLDGVLVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDEDFRKGMNLYLTKFLQKNAATEDLWESLEKASGKPIAAVMNTWTKQMGFPLIYVEAEQQEEDKVLKLAQKKFCASGPYTGEDFPMWMVPISICTGDDPTCAKMQILMDKPELTLVLKDVKPDQWVKLNLGTVGFYRTQYSPDMLENLIPAIKDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLEILSTLLSHTDFYEEIQVFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQVLSADLRSPVYVTILKHGDSTTLDTMLKLHKQADMQEEKNRIERVLGAISQPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKQGRKAAWKFVRDNWEELYNRYQGGFLISRLIKLTVDGFANDKMAAEVKAFFESHPAPSAERTVQQCCENILLNAAWLKRDAENIHQYFLQRKAPPAMV
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: complement(join(716538..716690,718525..718572,718674..718829,719049..719156,719647..719703,720299..720441,721037..721256,722386..722520,724086..724225,724636..724699,725435..725544,726333..726393,726767..726871,727265..727429,729716..729830,731276..731309,731415..731511,731970..732170,733098..733205,734112..734233,735609..735686,742587..742671,751044..751166))
location: region:716538-751166:-1
so has part: feature:751044-751166:-1:exon
so has part: feature:742587-742671:-1:exon
so has part: feature:735609-735686:-1:exon
so has part: feature:734112-734233:-1:exon
so has part: feature:733098-733205:-1:exon
so has part: feature:731970-732170:-1:exon
so has part: feature:731415-731511:-1:exon
so has part: feature:731276-731309:-1:exon
so has part: feature:729716-729830:-1:exon
so has part: feature:727265-727429:-1:exon
so has part: feature:726767-726871:-1:exon
so has part: feature:726333-726393:-1:exon
so has part: feature:725435-725544:-1:exon
so has part: feature:724636-724699:-1:exon
so has part: feature:724086-724225:-1:exon
so has part: feature:722386-722520:-1:exon
so has part: feature:721037-721256:-1:exon
so has part: feature:720299-720441:-1:exon
so has part: feature:719647-719703:-1:exon
so has part: feature:719049-719156:-1:exon
so has part: feature:718674-718829:-1:exon
so has part: feature:718525-718572:-1:exon
so has part: feature:716538-716690:-1:exon

XP_040393038.1
type: Protein
SIO_000068: ncbiprotein

position:716538:-1
position: 716538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751166:-1
position: 751166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751044-751166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742587-742671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735609-735686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:734112-734233:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733098-733205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731970-732170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:731415-731511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731276-731309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729716-729830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727265-727429:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726767-726871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:726333-726393:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:725435-725544:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724636-724699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:724086-724225:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722386-722520:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:721037-721256:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720299-720441:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:719647-719703:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719049-719156:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:718674-718829:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:718525-718572:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:716538-716690:-1:exon

NPEPPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: puromycin-sensitive aminopeptidase isoform X2
translation: MVKHATNQIVMNCADIDIITASYAPEGDEEVHATGFNYQNEDEKVTLSFPSTLQKGTGTLKIDFVGELNDKMKGFYRSKYTTPTGDTRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENLVEVKFARTPIMSTYLVAFVVGEYDFVETRSLDGVLVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDEDFRKGMNLYLTKFLQKNAATEDLWESLEKASGKPIAAVMNTWTKQMGFPLIYVEAEQQEEDKVLKLAQKKFCASGPYTGEDFPMWMVPISICTGDDPTCAKMQILMDKPELTLVLKDVKPDQWVKLNLGTVGFYRTQYSPDMLENLIPAIKDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLEILSTLLSHTDFYEEIQVFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQVLSADLRSPVYVTILKHGDSTTLDTMLKLHKQADMQEEKNRIERVLGAISQPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKQGRKAAWKFVRDNWEELYNRYQGGFLISRLIKLTVDGFANDKMAAEVKAFFESHPAPSAERTVQQCCENILLNAAWLKRDAENIHQYFLQRKAPPAMV
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: complement(join(716538..716690,718525..718572,718674..718829,719049..719156,719647..719703,720299..720441,721037..721256,722386..722520,724086..724225,724636..724699,725435..725544,726333..726393,726767..726871,727265..727429,729716..729830,731276..731309,731415..731511,731970..732170,733098..733205,734112..734233,735609..735686,742587..742671,749679..749681))
location: region:716538-749681:-1
so has part: feature:749679-749681:-1:exon
so has part: feature:742587-742671:-1:exon
so has part: feature:735609-735686:-1:exon
so has part: feature:734112-734233:-1:exon
so has part: feature:733098-733205:-1:exon
so has part: feature:731970-732170:-1:exon
so has part: feature:731415-731511:-1:exon
so has part: feature:731276-731309:-1:exon
so has part: feature:729716-729830:-1:exon
so has part: feature:727265-727429:-1:exon
so has part: feature:726767-726871:-1:exon
so has part: feature:726333-726393:-1:exon
so has part: feature:725435-725544:-1:exon
so has part: feature:724636-724699:-1:exon
so has part: feature:724086-724225:-1:exon
so has part: feature:722386-722520:-1:exon
so has part: feature:721037-721256:-1:exon
so has part: feature:720299-720441:-1:exon
so has part: feature:719647-719703:-1:exon
so has part: feature:719049-719156:-1:exon
so has part: feature:718674-718829:-1:exon
so has part: feature:718525-718572:-1:exon
so has part: feature:716538-716690:-1:exon

XP_040393039.1
type: Protein
SIO_000068: ncbiprotein

position:749681:-1
position: 749681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749679-749681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742587-742671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735609-735686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:734112-734233:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733098-733205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731970-732170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:731415-731511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731276-731309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729716-729830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727265-727429:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726767-726871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:726333-726393:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:725435-725544:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724636-724699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:724086-724225:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722386-722520:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:721037-721256:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720299-720441:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:719647-719703:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719049-719156:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:718674-718829:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:718525-718572:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:716538-716690:-1:exon

MRPL45
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MRPL45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 755583..759942
location: region:755583-759942:1
so has part: feature:755583-759942:1:exon
subclass of: SO_0000010

121059904
type: Gene
SIO_000068: ncbigene

position:755583:1
position: 755583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759942:1
position: 759942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755583-759942:1:exon

MRPL45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MRPL45
product: mitochondrial ribosomal protein L45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537109.1
SIO_010081: MRPL45
subclass of: SO_0000673
so part of: MRPL45
location: join(755583..755676,755950..756145,756580..756697,757071..757169,757725..757773,758018..758167,758251..758424,759283..759942)
location: region:755583-759942:1
so has part: feature:755583-755676:1:exon
so has part: feature:755950-756145:1:exon
so has part: feature:756580-756697:1:exon
so has part: feature:757071-757169:1:exon
so has part: feature:757725-757773:1:exon
so has part: feature:758018-758167:1:exon
so has part: feature:758251-758424:1:exon
so has part: feature:759283-759942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:755583-755676:1:exon

position:755676:1
position: 755676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:755950-756145:1:exon

position:755950:1
position: 755950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756145:1
position: 756145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756580-756697:1:exon

position:756580:1
position: 756580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756697:1
position: 756697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:757071-757169:1:exon

position:757071:1
position: 757071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757169:1
position: 757169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:757725-757773:1:exon

position:757725:1
position: 757725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757773:1
position: 757773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:758018-758167:1:exon

position:758018:1
position: 758018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758167:1
position: 758167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:758251-758424:1:exon

position:758251:1
position: 758251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758424:1
position: 758424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:759283-759942:1:exon

position:759283:1
position: 759283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MRPL45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L45, mitochondrial
translation: MAAAMRAAGPGLLSRRALGSALRPPRAAPPCLAVPVRTKRRLFVPEWARELSPEQKERRLRAASRALPEDRVERAFFLACTADIIDPYVPPEGDARMTSLSKDGLKQRVEKLKQTAASQLALRKVKDHDPDFSTKTFPEKAQEIFIEAHNCLANFNKQKLHSLVTERCYPDMVRGNRYKTIRWSFVESLEPPRVVHIRCNSIVNPSNLYGQVTVRMHTRQTLAIYDRFGRLMYGGEQVPKDVLEYVVFERYLVNPYGTWRMHGKIVPEWAPPKDPIVKTVMIPGPTLDSSQEVKENK
SIO_010081: MRPL45
subclass of: SO_0000673
so part of: MRPL45
location: join(755629..755676,755950..756145,756580..756697,757071..757169,757725..757773,758018..758167,758251..758424,759283..759342)
location: region:755629-759342:1
so has part: feature:755629-755676:1:exon
so has part: feature:755950-756145:1:exon
so has part: feature:756580-756697:1:exon
so has part: feature:757071-757169:1:exon
so has part: feature:757725-757773:1:exon
so has part: feature:758018-758167:1:exon
so has part: feature:758251-758424:1:exon
so has part: feature:759283-759342:1:exon

XP_040393043.1
type: Protein
SIO_000068: ncbiprotein

position:755629:1
position: 755629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759342:1
position: 759342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755629-755676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:755950-756145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756580-756697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:757071-757169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757725-757773:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758018-758167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758251-758424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759283-759342:1:exon

GPR179
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(760087..772720)
location: region:760087-772720:-1
so has part: feature:760087-772720:-1:exon
subclass of: SO_0000010

121059903
type: Gene
SIO_000068: ncbigene

position:760087:-1
position: 760087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772720:-1
position: 772720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760087-772720:-1:exon

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GPR179
product: G protein-coupled receptor 179, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040537106.1
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: complement(join(760087..767053,767409..767555,767680..767785,767956..768094,768525..768763,768837..768946,769456..769925,770057..770159,771188..771296,771783..772720))
location: region:760087-772720:-1
so has part: feature:771783-772720:-1:exon
so has part: feature:771188-771296:-1:exon
so has part: feature:770057-770159:-1:exon
so has part: feature:769456-769925:-1:exon
so has part: feature:768837-768946:-1:exon
so has part: feature:768525-768763:-1:exon
so has part: feature:767956-768094:-1:exon
so has part: feature:767680-767785:-1:exon
so has part: feature:767409-767555:-1:exon
so has part: feature:760087-767053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771783-772720:-1:exon

position:771783:-1
position: 771783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:771188-771296:-1:exon

position:771188:-1
position: 771188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771296:-1
position: 771296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:770057-770159:-1:exon

position:770057:-1
position: 770057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770159:-1
position: 770159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:769456-769925:-1:exon

position:769456:-1
position: 769456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769925:-1
position: 769925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:768837-768946:-1:exon

position:768837:-1
position: 768837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768946:-1
position: 768946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:768525-768763:-1:exon

position:768525:-1
position: 768525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768763:-1
position: 768763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:767956-768094:-1:exon

position:767956:-1
position: 767956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768094:-1
position: 768094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:767680-767785:-1:exon

position:767680:-1
position: 767680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767785:-1
position: 767785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:767409-767555:-1:exon

position:767409:-1
position: 767409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767555:-1
position: 767555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:760087-767053:-1:exon

position:767053:-1
position: 767053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 179 isoform X1
translation: MPPPGPDAGCRGAALSPAMGPRRWPLLWCLQAALLLGGAQQPPASPPPGVSTSEPGASRDAEGSAAALAFLRSGDAQRLARANCSRGVAAGAPGPGPPPALRAALRAAPEALAQAANFLNMLFQSNDIREASVAEDVEWYQALVRSLAEGHPWVRRAVLALDAHPLAAKPRLMLQATAGDGEIRLRDVSAAAPSLGNRSWDDEWFNALRSQRSPQLRKRVLSNDLRSMETPKWQRGDSYVGEPGHVRWSPPFLECRDGKFLPAWAVTLSSAFYGLKPDLSPEFKGVVRVDIELRDVGIDQCASGPGWFAGTHRCDLNSTQCVPQESRGFVLGQYVCRCKPGFYGAGGVAIGTGAGVAGSPVPVDGGPRLACRPCREGCATCVDDTPCLIQEDRALRAAILSCQAFCMLAVFLSMLISYHFRRSKASASWAAPGPPAAAPLAPCPPARLPPAGGLSREGVLGWASLPWALSLPAPLGSRLRPHVALSPQRIRASGVVLLETILFGSLLLYFPVFILYFKPSIFRCIVLRWVRMLGFATVYGTIALKLYRVLRVFLARTAQRVPYMSSGRVLKMLGLILLLVLWFLAAWTVGMLENVDKNIPLVIRTQTTRGLHFYICGHDRWDYMMVVAEMLFLLWGSSLCYATRAVPSAFHEPRYMGIALHNELMISAAFHVARFVMVPSLHPDWTLLLFFAHTHSTVTMTLALLFIPKFLHASSPLREEIAAEVYEDELDMRRSGSCLNSSIASAWSERSLDPDDIREELKKLYAQLEVLKTRRMAANNPHVPKKRGSRRSLGRSFVRRLAELPEAVVSRGSREERLRTPGSRRASAKRLPSAGSASLRVRDGGSRHHAAALHKSRSSESPAWDPRGGSPGPSPTGDTVPVTPAATAAGSEQSDSESLDAAPLVCKSASAHNLSGHEQPPQPRALLLKSLSVVAGARDEALLVASRAARDGRDAERDAELHAKQHPAAGRPTDQGPPEQAGKPQSPAAATGTAGAPLPAGSGRADGGPSCDASPPGDGKVQKHVTYVPTKSISVDSSHFSGRVRVAVRRTPPPPPVRYQSLVHHTAAAGDSRETLEPPVGTPVGTPVGTLGRASPTSGQGRLQSARSIPAEVCPWELIQEEILSRKQKAAEPSASGTPGDTPVAPPGLKPSSQKTFKSLGLAIKALNRSRGKNSLKGKKESEGSLRTRGRDRDGGSRRERPKLAGTPTLSPGGSSQGPTNGSPKPSPQEGDAVPCRHNNNAGSTSESAAWGDSRGKAEGQEDGTGVHTGGGEELAEEPSAAPGSADAGGVPEMPSGAHEVSPSTSRQDTTEHPHQTPGAAQAGPRAGAEPPAVGQGQEAPRHPTEEPPPAPAPPPAELGTGSHRVPGHSAAAAGPRAEVCPWEALGAPRGALALQEATAAGGGSPRGGSPMKVLGKGGSQPGPCSAREGWGTEGLPARSRSTEVAQAGGGLRTEICPWEGSGGEAGPPHGGPGSIQPGAELGKKPPELPAAAPGTAGSVGGRMAEVCPWESAEGEMANRAEICPWEVGKPQPEKGKVQQDGGRLPRGGRSIRPLCPQQTQGPESGGRQPAARRPWGSASTELPPPRAAPDSSDLPKLTSKSPESVRASVCPWEATGASSDRAEVCPWETSTALSMAEKIKEENEFSPAVPLQTAAPGGRSEPPHAADQGSSQRLSVCPWEGAEEPGEGLTAESPALPKTSAQAGKVGSKKADVCPWEAEEEPLAKAEICPWEVSAAPPGKGRWSQDTRGTPPADDKPRSREPEGSKVKLAGEGGRAARRDTQISAKLFGKSLEGSKAEPKKSQSTESPKAEVCPWEAQGLEAGSKAEICPWEAAAPPFDEQKAKQLPRAGPRGEKRITRQAALASPARSLERGGSEAACPWEPPARPRTGSPALPAARESQSTESLKAEVCPWEAQELGARDKAEICPWEVAVLPSEKGKPRQDKGGLSRGGRNTSTDQGVLKETRDSLPAKAGWDRESVCPWEGLGTGGSSAGGTKSP…
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: complement(join(762446..767053,767409..767555,767680..767785,767956..768094,768525..768763,768837..768946,769456..769925,770057..770159,771188..771296,771783..772633))
location: region:762446-772633:-1
so has part: feature:771783-772633:-1:exon
so has part: feature:771188-771296:-1:exon
so has part: feature:770057-770159:-1:exon
so has part: feature:769456-769925:-1:exon
so has part: feature:768837-768946:-1:exon
so has part: feature:768525-768763:-1:exon
so has part: feature:767956-768094:-1:exon
so has part: feature:767680-767785:-1:exon
so has part: feature:767409-767555:-1:exon
so has part: feature:762446-767053:-1:exon

XP_040393040.1
type: Protein
SIO_000068: ncbiprotein

position:762446:-1
position: 762446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772633:-1
position: 772633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771783-772633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771188-771296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770057-770159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769456-769925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768837-768946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768525-768763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767956-768094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767680-767785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767409-767555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762446-767053:-1:exon

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GPR179
product: G protein-coupled receptor 179, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040537108.1
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: complement(join(766929..767053,767354..767555,767680..767785,767956..768094,768525..768763,768837..768946,769456..769925,770057..770159,771188..771296,771783..772720))
location: region:766929-772720:-1
so has part: feature:771783-772720:-1:exon
so has part: feature:771188-771296:-1:exon
so has part: feature:770057-770159:-1:exon
so has part: feature:769456-769925:-1:exon
so has part: feature:768837-768946:-1:exon
so has part: feature:768525-768763:-1:exon
so has part: feature:767956-768094:-1:exon
so has part: feature:767680-767785:-1:exon
so has part: feature:767354-767555:-1:exon
so has part: feature:766929-767053:-1:exon

position:766929:-1
position: 766929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771783-772720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771188-771296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770057-770159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769456-769925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768837-768946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768525-768763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767956-768094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767680-767785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767354-767555:-1:exon

position:767354:-1
position: 767354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:766929-767053:-1:exon

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 179 isoform X2
translation: MPPPGPDAGCRGAALSPAMGPRRWPLLWCLQAALLLGGAQQPPASPPPGVSTSEPGASRDAEGSAAALAFLRSGDAQRLARANCSRGVAAGAPGPGPPPALRAALRAAPEALAQAANFLNMLFQSNDIREASVAEDVEWYQALVRSLAEGHPWVRRAVLALDAHPLAAKPRLMLQATAGDGEIRLRDVSAAAPSLGNRSWDDEWFNALRSQRSPQLRKRVLSNDLRSMETPKWQRGDSYVGEPGHVRWSPPFLECRDGKFLPAWAVTLSSAFYGLKPDLSPEFKGVVRVDIELRDVGIDQCASGPGWFAGTHRCDLNSTQCVPQESRGFVLGQYVCRCKPGFYGAGGVAIGTGAGVAGSPVPVDGGPRLACRPCREGCATCVDDTPCLIQEDRALRAAILSCQAFCMLAVFLSMLISYHFRRSKASASWAAPGPPAAAPLAPCPPARLPPAGGLSREGVLGWASLPWALSLPAPLGSRLRPHVALSPQRIRASGVVLLETILFGSLLLYFPVFILYFKPSIFRCIVLRWVRMLGFATVYGTIALKLYRVLRVFLARTAQRVPYMSSGRVLKMLGLILLLVLWFLAAWTVGMLENVDKNIPLVIRTQTTRGLHFYICGHDRWDYMMVVAEMLFLLWGSSLCYATRAVPSAFHEPRYMGIALHNELMISAAFHVARFVMVPSLHPDWTLLLFFAHTHSTVTMTLALLFIPKFLHASSPLREEIAAEVYEDELDMRRSGSCLNSSIASAWSERSLDPDDIRVGGTLRTFF
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: complement(join(767379..767555,767680..767785,767956..768094,768525..768763,768837..768946,769456..769925,770057..770159,771188..771296,771783..772633))
location: region:767379-772633:-1
so has part: feature:771783-772633:-1:exon
so has part: feature:771188-771296:-1:exon
so has part: feature:770057-770159:-1:exon
so has part: feature:769456-769925:-1:exon
so has part: feature:768837-768946:-1:exon
so has part: feature:768525-768763:-1:exon
so has part: feature:767956-768094:-1:exon
so has part: feature:767680-767785:-1:exon
so has part: feature:767379-767555:-1:exon

XP_040393042.1
type: Protein
SIO_000068: ncbiprotein

position:767379:-1
position: 767379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771783-772633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771188-771296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770057-770159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769456-769925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768837-768946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768525-768763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767956-768094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767680-767785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767379-767555:-1:exon

SOCS7
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 774198..791298
location: region:774198-791298:1
so has part: feature:774198-791298:1:exon
subclass of: SO_0000010

121059443
type: Gene
SIO_000068: ncbigene

position:774198:1
position: 774198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791298:1
position: 791298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774198-791298:1:exon

SOCS7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SOCS7
product: suppressor of cytokine signaling 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040536317.1
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: join(774198..774378,774649..775163,779656..779720,782350..782454,783220..783321,784161..784291,784705..784873,787472..787600,790149..790284,790596..790753,791047..791298)
location: region:774198-791298:1
so has part: feature:774198-774378:1:exon
so has part: feature:774649-775163:1:exon
so has part: feature:779656-779720:1:exon
so has part: feature:782350-782454:1:exon
so has part: feature:783220-783321:1:exon
so has part: feature:784161-784291:1:exon
so has part: feature:784705-784873:1:exon
so has part: feature:787472-787600:1:exon
so has part: feature:790149-790284:1:exon
so has part: feature:790596-790753:1:exon
so has part: feature:791047-791298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774198-774378:1:exon

position:774378:1
position: 774378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:774649-775163:1:exon

position:774649:1
position: 774649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775163:1
position: 775163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:779656-779720:1:exon

position:779656:1
position: 779656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779720:1
position: 779720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782350-782454:1:exon

position:782350:1
position: 782350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782454:1
position: 782454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:783220-783321:1:exon

position:783220:1
position: 783220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783321:1
position: 783321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:784161-784291:1:exon

position:784161:1
position: 784161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784291:1
position: 784291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:784705-784873:1:exon

position:784705:1
position: 784705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784873:1
position: 784873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:787472-787600:1:exon

position:787472:1
position: 787472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787600:1
position: 787600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:790149-790284:1:exon

position:790149:1
position: 790149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790284:1
position: 790284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:790596-790753:1:exon

position:790596:1
position: 790596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790753:1
position: 790753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:791047-791298:1:exon

position:791047:1
position: 791047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOCS7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 7
translation: MQRAELRDGEAAAAAASYRVLSRLLGYGAAPEAGAAGGAVTAAAAAAAGRWGPPGGLELQLAALGLRPPGLGPKGPGGCPCLGPPPPAGPAAEETSDALLVLEALEPDEAGSGSEEEPGSPDGQEPPRGAARANGRSGTGPGPAPPPPPGAGCRKGSLRVRLRRLFRTKSCSGGSAAGDAAATGSRRAGDLPASAGSLTDVCGARGREQEAGRKHRLTRTQSAFSPVVFSPLFTGETVSLVDVDISQRGLTSPHPPTPPPPPRRSLSLLDDISGTLPTSVLVGPMGSSLQSFPLPPPPPPHAPDAFPRIVPLRPMETAPSQPAPHLQCPLYRLDSSSFAASLRELEKCGWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGITHHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIKRAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKSLQHLCRFRIRQLVRIDHIPELPLPKPLISYIRKFYYYDPQEEVYLSLKEAQLISKQKQETESST
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: join(774256..774378,774649..775163,779656..779720,782350..782454,783220..783321,784161..784291,784705..784873,787472..787600,790149..790284,790596..790716)
location: region:774256-790716:1
so has part: feature:774256-774378:1:exon
so has part: feature:774649-775163:1:exon
so has part: feature:779656-779720:1:exon
so has part: feature:782350-782454:1:exon
so has part: feature:783220-783321:1:exon
so has part: feature:784161-784291:1:exon
so has part: feature:784705-784873:1:exon
so has part: feature:787472-787600:1:exon
so has part: feature:790149-790284:1:exon
so has part: feature:790596-790716:1:exon

XP_040392251.1
type: Protein
SIO_000068: ncbiprotein

position:774256:1
position: 774256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790716:1
position: 790716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774256-774378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:774649-775163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779656-779720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782350-782454:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783220-783321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:784161-784291:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:784705-784873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787472-787600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790149-790284:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790596-790716:1:exon

ARHGAP23
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ARHGAP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 811226..833119
location: region:811226-833119:1
so has part: feature:811226-833119:1:exon
subclass of: SO_0000010

121059907
type: Gene
SIO_000068: ncbigene

position:811226:1
position: 811226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833119:1
position: 833119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811226-833119:1:exon

ARHGAP23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ARHGAP23
product: Rho GTPase activating protein 23
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040537120.1
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: join(811226..811830,815704..815883,819101..819125,820067..820159,820508..820586,821000..821054,822207..823638,823948..824103,824284..824395,824483..824540,824655..824792,824876..825175,826457..826518,826945..827072,827231..827349,827438..827593,827971..828049,828240..828313,828405..828494,828622..828747,828916..828957,829064..829157,830642..830673,830798..833119)
location: region:811226-833119:1
so has part: feature:811226-811830:1:exon
so has part: feature:815704-815883:1:exon
so has part: feature:819101-819125:1:exon
so has part: feature:820067-820159:1:exon
so has part: feature:820508-820586:1:exon
so has part: feature:821000-821054:1:exon
so has part: feature:822207-823638:1:exon
so has part: feature:823948-824103:1:exon
so has part: feature:824284-824395:1:exon
so has part: feature:824483-824540:1:exon
so has part: feature:824655-824792:1:exon
so has part: feature:824876-825175:1:exon
so has part: feature:826457-826518:1:exon
so has part: feature:826945-827072:1:exon
so has part: feature:827231-827349:1:exon
so has part: feature:827438-827593:1:exon
so has part: feature:827971-828049:1:exon
so has part: feature:828240-828313:1:exon
so has part: feature:828405-828494:1:exon
so has part: feature:828622-828747:1:exon
so has part: feature:828916-828957:1:exon
so has part: feature:829064-829157:1:exon
so has part: feature:830642-830673:1:exon
so has part: feature:830798-833119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811226-811830:1:exon

position:811830:1
position: 811830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815704-815883:1:exon

position:815704:1
position: 815704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815883:1
position: 815883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:819101-819125:1:exon

position:819101:1
position: 819101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819125:1
position: 819125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:820067-820159:1:exon

position:820067:1
position: 820067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820159:1
position: 820159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:820508-820586:1:exon

position:820508:1
position: 820508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820586:1
position: 820586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:821000-821054:1:exon

position:821000:1
position: 821000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821054:1
position: 821054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:822207-823638:1:exon

position:822207:1
position: 822207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823638:1
position: 823638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:823948-824103:1:exon

position:823948:1
position: 823948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824103:1
position: 824103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:824284-824395:1:exon

position:824284:1
position: 824284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824395:1
position: 824395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:824483-824540:1:exon

position:824483:1
position: 824483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824540:1
position: 824540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:824655-824792:1:exon

position:824655:1
position: 824655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824792:1
position: 824792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:824876-825175:1:exon

position:824876:1
position: 824876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825175:1
position: 825175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:826457-826518:1:exon

position:826457:1
position: 826457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826518:1
position: 826518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:826945-827072:1:exon

position:826945:1
position: 826945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827072:1
position: 827072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:827231-827349:1:exon

position:827231:1
position: 827231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827349:1
position: 827349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:827438-827593:1:exon

position:827438:1
position: 827438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827593:1
position: 827593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:827971-828049:1:exon

position:827971:1
position: 827971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828049:1
position: 828049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:828240-828313:1:exon

position:828240:1
position: 828240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828313:1
position: 828313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:828405-828494:1:exon

position:828405:1
position: 828405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828494:1
position: 828494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:828622-828747:1:exon

position:828622:1
position: 828622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828747:1
position: 828747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:828916-828957:1:exon

position:828916:1
position: 828916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828957:1
position: 828957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:829064-829157:1:exon

position:829064:1
position: 829064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829157:1
position: 829157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:830642-830673:1:exon

position:830642:1
position: 830642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830673:1
position: 830673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:830798-833119:1:exon

position:830798:1
position: 830798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ARHGAP23
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 23
translation: MVEESSGRGERGSRRALQGPPPAPSPVAVVSKALWSVERAGKGWRCERAVGVDCSSPEPRCIWLSSLRRHAAAPEPRWPPGPRPRCAPPRTAKGRRPTPGRRDGASPNDNAPPEGPFPWGGPKTVVLRKSTQGGFGFTLRHFIVYPPESAVHSPAKEEENGNRAGPPRSRLEPMDTIFVKNVREDGPAHQAGLRTGDRLVKVNGESIIGKTYSQVIALIQNSDDVLELSIMPKDEDILQLAYSQDAYLKGNEPYSGGAQSIPEPPPICYPRKTYPFQARGAEPPLGQPPDPRAHRPAGPSSPLSTAALAGARSEAGGSPAHRPEEPQPGGPPQRPAVPHGRPGSFSRSGCPSSSASSLPERYGVPPAASSCYGGPKHLAEHRTHCGFKEGGGGPRVPGRQECQQALSRWFCSQEPRRSTSEERRYAMPPRYRSVSQDRLGGSAAPRGWPHSASHDTLLQPAREGWAHRARSDHSLGRCGRSMEALEPGALLSPRLDRSAWPPERLCRATAAGPPGTHSSFTPPSSSSSAAREPAAPVQKHPSQPNLQSVDDSGYIGYRSYSPSFQRRTGLLHALSFRDPAFGGLPTFSITQRPAATAAPFPERAAPVAPLPAGPTHPGPPLAPEAPQEQRLESSRVPEQHEDRREEVVLRQKPPTGRKMPPPLRQMNFVFPDGVKETDVCDPPAASSRGERPAAERSGRRVAPLAAPEDSLASIPFIDEPTSPSIDLKAKHVPASSVVSSAMNSAPAVATSPSSPTFAFALSRHYSQDCSSIKAGRRSSYLLAITTERSKSCDDGLNTFRDEGKILRRMPSRVPSLRMLRSFFTDGSLDSLGTSEDTRSKRHSTSDLSDVTFSDVRKEGWLHYKQILTKKGKKVGGGIRQWKRVFAVLRTHSLYLCKDRREAVTCGPAPGEEEQPISIRACLVDISYSETKRKHVFRLTTADFCEYLFQAEDREDMLAWIKVIRENSKAEGEDPGFASQALINKKLNDYRKVSPAGAKPDSSPKGSRGLGIRAEFLKQTGTSTPRSPRQDAAVMKDESSSQKAPWGINIMKKNKKSAPRAFGVRLEDCQPAPDNKNVPLIVEACCKVVEDRGLEYMGIYRVPGNNAVVSSLQEQLNKGATEINLQDERWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIEANRIEDASERMRTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHSDWFFSDKEDKGEKTPVDEKEAQSVPNIEYLLPNIGRTAAPGDASDSTHSGSAKLKGTWPSRKEPSHRELLAIPFISAVNRKRKKRREAEGFSSSTDDDVEHRDTKGQEQEDEEAMAATPGPGKAPYGPGTELAAPSPAGPEQESALEPGGSGAEPALDARSIVSGYSTLSTIDRSLCSEVQSVAESRGEEADDERSEFSHVETDTESREGARARLGQVEGGAGGEDKVPPGRPSFNSHRLIQCDTLARRKLGRPRPAGETPVPAGEGQGGWAPPXGRPSLREQLRQRLRASADDMGVRLRRAHSPETRRKKSSWRRHTVVVPGGLKDLNFNEWKEPRGGLDVPPGPCRDKDSGLSSLESTKARPTAPSPAQPGGATKAPSTKSPPGSPGPPAPGPVPPLRFPQCL
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: join(811543..811830,815704..815883,819101..819125,820067..820159,820508..820586,821000..821054,822207..823638,823948..824103,824284..824395,824483..824540,824655..824792,824876..825175,826457..826518,826945..827072,827231..827349,827438..827593,827971..828049,828240..828313,828405..828494,828622..828747,828916..828957,829064..829157,830642..830673,830798..831848)
location: region:811543-831848:1
so has part: feature:811543-811830:1:exon
so has part: feature:815704-815883:1:exon
so has part: feature:819101-819125:1:exon
so has part: feature:820067-820159:1:exon
so has part: feature:820508-820586:1:exon
so has part: feature:821000-821054:1:exon
so has part: feature:822207-823638:1:exon
so has part: feature:823948-824103:1:exon
so has part: feature:824284-824395:1:exon
so has part: feature:824483-824540:1:exon
so has part: feature:824655-824792:1:exon
so has part: feature:824876-825175:1:exon
so has part: feature:826457-826518:1:exon
so has part: feature:826945-827072:1:exon
so has part: feature:827231-827349:1:exon
so has part: feature:827438-827593:1:exon
so has part: feature:827971-828049:1:exon
so has part: feature:828240-828313:1:exon
so has part: feature:828405-828494:1:exon
so has part: feature:828622-828747:1:exon
so has part: feature:828916-828957:1:exon
so has part: feature:829064-829157:1:exon
so has part: feature:830642-830673:1:exon
so has part: feature:830798-831848:1:exon

XP_040393054.1
type: Protein
SIO_000068: ncbiprotein

position:811543:1
position: 811543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831848:1
position: 831848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811543-811830:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815704-815883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:819101-819125:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:820067-820159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:820508-820586:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821000-821054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822207-823638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:823948-824103:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824284-824395:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824483-824540:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824655-824792:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:824876-825175:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:826457-826518:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:826945-827072:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:827231-827349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:827438-827593:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:827971-828049:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:828240-828313:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:828405-828494:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:828622-828747:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:828916-828957:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:829064-829157:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:830642-830673:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:830798-831848:1:exon

SRCIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(833309..903895)
location: region:833309-903895:-1
so has part: feature:833309-903895:-1:exon
subclass of: SO_0000010

121059905
type: Gene
SIO_000068: ncbigene

position:833309:-1
position: 833309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903895:-1
position: 903895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833309-903895:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537114.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,903763..903895))
location: region:833309-903895:-1
so has part: feature:903763-903895:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-836891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903763-903895:-1:exon

position:903763:-1
position: 903763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

position:875149:-1
position: 875149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875432:-1
position: 875432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864241-864264:-1:exon

position:864241:-1
position: 864241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864264:-1
position: 864264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:852815-853007:-1:exon

position:852815:-1
position: 852815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853007:-1
position: 853007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:852466-852664:-1:exon

position:852466:-1
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position:852664:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:851790-851883:-1:exon

position:851790:-1
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reference: sequence
type: ReverseStrandPosition
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position:851883:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:850551-851380:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:850080-850172:-1:exon

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position:850172:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:849926-849969:-1:exon

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position:849969:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:849424-849602:-1:exon

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position:849602:-1
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urn:…
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urn:…
SIO_000300: 12
SIO_000628: feature:848731-848861:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:847655-847802:-1:exon

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urn:…
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SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

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reference: sequence
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position:846004:-1
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urn:…
SIO_000300: 16
SIO_000628: feature:845312-845466:-1:exon

position:845312:-1
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reference: sequence
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position:845466:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:845071-845223:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:844547-844675:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:841936-843204:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:839358-839495:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:833309-836891:-1:exon

position:836891:-1
position: 836891
reference: sequence
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SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537113.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,894680..894742,903763..903874))
location: region:833309-903874:-1
so has part: feature:903763-903874:-1:exon
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so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
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so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-836891:-1:exon

position:903874:-1
position: 903874
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:903763-903874:-1:exon

urn:…
SIO_000300: 2
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position:894680:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894742:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875149-875432:-1:exon

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SIO_000300: 4
SIO_000628: feature:864241-864264:-1:exon

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SIO_000628: feature:852466-852664:-1:exon

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SIO_000300: 7
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SIO_000300: 9
SIO_000628: feature:850080-850172:-1:exon

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SIO_000300: 10
SIO_000628: feature:849926-849969:-1:exon

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SIO_000300: 11
SIO_000628: feature:849424-849602:-1:exon

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SIO_000300: 12
SIO_000628: feature:849102-849277:-1:exon

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SIO_000300: 13
SIO_000628: feature:848731-848861:-1:exon

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SIO_000300: 14
SIO_000628: feature:847655-847802:-1:exon

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SIO_000300: 15
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845312-845466:-1:exon

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SIO_000300: 18
SIO_000628: feature:845071-845223:-1:exon

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SIO_000300: 19
SIO_000628: feature:844547-844675:-1:exon

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SIO_000300: 20
SIO_000628: feature:841936-843204:-1:exon

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SIO_000300: 21
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:833309-836891:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537117.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885511..885632))
location: region:833309-885632:-1
so has part: feature:885511-885632:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
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so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
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so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
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so has part: feature:845755-846004:-1:exon
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so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-836891:-1:exon

position:885632:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885511-885632:-1:exon

position:885511:-1
position: 885511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864241-864264:-1:exon

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SIO_000300: 4
SIO_000628: feature:852815-853007:-1:exon

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SIO_000300: 5
SIO_000628: feature:852466-852664:-1:exon

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SIO_000300: 6
SIO_000628: feature:851790-851883:-1:exon

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SIO_000300: 7
SIO_000628: feature:850551-851380:-1:exon

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SIO_000300: 8
SIO_000628: feature:850080-850172:-1:exon

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SIO_000300: 9
SIO_000628: feature:849926-849969:-1:exon

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SIO_000300: 10
SIO_000628: feature:849424-849602:-1:exon

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SIO_000300: 11
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:833309-836891:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537111.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,875149..875432,885096..885234))
location: region:833309-885234:-1
so has part: feature:885096-885234:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
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so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-836891:-1:exon

position:885234:-1
position: 885234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885234:-1:exon

position:885096:-1
position: 885096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

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SIO_000300: 3
SIO_000628: feature:852815-853007:-1:exon

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SIO_000300: 4
SIO_000628: feature:852466-852664:-1:exon

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SIO_000628: feature:851790-851883:-1:exon

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SIO_000300: 6
SIO_000628: feature:850551-851380:-1:exon

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SIO_000300: 7
SIO_000628: feature:850080-850172:-1:exon

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SIO_000628: feature:849926-849969:-1:exon

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SIO_000628: feature:849424-849602:-1:exon

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SIO_000628: feature:848731-848861:-1:exon

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SIO_000300: 12
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845755-846004:-1:exon

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SIO_000300: 15
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845071-845223:-1:exon

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SIO_000300: 17
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:833309-836891:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537110.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885096..885234))
location: region:833309-885234:-1
so has part: feature:885096-885234:-1:exon
so has part: feature:875149-875432:-1:exon
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so has part: feature:845755-846004:-1:exon
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so has part: feature:845071-845223:-1:exon
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so has part: feature:841936-843204:-1:exon
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so has part: feature:833309-836891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885234:-1:exon

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SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

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SIO_000628: feature:850080-850172:-1:exon

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SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:833309-836891:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040537112.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..837123,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885096..885233))
location: region:833309-885233:-1
so has part: feature:885096-885233:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
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so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-837123:-1:exon

position:885233:-1
position: 885233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
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urn:…
SIO_000300: 7
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urn:…
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
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urn:…
SIO_000300: 21
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position:837123:-1
position: 837123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537119.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885096..885229))
location: region:833309-885229:-1
so has part: feature:885096-885229:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-836891:-1:exon

position:885229:-1
position: 885229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
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urn:…
SIO_000300: 11
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SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:833309-836891:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537118.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885096..885228))
location: region:833309-885228:-1
so has part: feature:885096-885228:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
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so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
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so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-836891:-1:exon

position:885228:-1
position: 885228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885228:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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urn:…
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:848731-848861:-1:exon

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SIO_000300: 13
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:833309-836891:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040537115.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,870653..870743))
location: region:833309-870743:-1
so has part: feature:870653-870743:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
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so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
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so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-836891:-1:exon

position:870743:-1
position: 870743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870653-870743:-1:exon

position:870653:-1
position: 870653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:833309-836891:-1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRCIN1
product: SRC kinase signaling inhibitor 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040537116.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(833309..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,870653..870727))
location: region:833309-870727:-1
so has part: feature:870653-870727:-1:exon
so has part: feature:864241-864264:-1:exon
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so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:833309-836891:-1:exon

position:870727:-1
position: 870727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870653-870727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864241-864264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852815-853007:-1:exon

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SIO_000300: 4
SIO_000628: feature:852466-852664:-1:exon

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SIO_000300: 5
SIO_000628: feature:851790-851883:-1:exon

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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:850080-850172:-1:exon

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SIO_000300: 8
SIO_000628: feature:849926-849969:-1:exon

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SIO_000300: 9
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:833309-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X2
translation: MLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKEPVAPAPPGSRAFSLPQIVLTEWESAPPSPETEPEVPVEMGCSEHGDPAGSGGAGGELAPEAGGRCQVSAGTPRKSPSMPGGLPASAPQSQSAPSRGCEHAPGETRRFPPADSKVPSPPKRGASQPTGAEGEDTALSPARRQEGSSQTAPQGPLVEQPPHPRGQATDPGAEDTALVPGAGSHRPSAVPSDAEPRGGARQSTREASVPPGCSNGVCKHLQRDQRDGLPVPKARRPAGCDHIQGSGWCQAGHPQGQVTASPGPHQCAVSPGWNSVGPAAGAGGGEEDAGGKAAEGLCCPAPRGRSKGDVSPLHSMSPRSKEIYKGTYQRLDSLEETIRELEITISEISSHPAAEFIFPKELLGQAVSDGSEETKAGAGHLEHSGCDGGTALDLSRPKEDAPESPSLSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,875149..875432,885096..885213))
location: region:836766-885213:-1
so has part: feature:885096-885213:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393045.1
type: Protein
SIO_000068: ncbiprotein

position:836766:-1
position: 836766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885213:-1
position: 885213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X7
translation: MLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELESGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885096..885213))
location: region:836766-885213:-1
so has part: feature:885096-885213:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864241-864264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X6
translation: MLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885096..885213))
location: region:836766-885213:-1
so has part: feature:885096-885213:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864241-864264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X1
translation: MLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKEPVAPAPPGSRAFSLPQIVLTEWESAPPSPETEPEVPVEMGCSEHGDPAGSGGAGGELAPEAGGRCQVSAGTPRKSPSMPGGLPASAPQSQSAPSRGCEHAPGETRRFPPADSKVPSPPKRGASQPTGAEGEDTALSPARRQEGSSQTAPQGPLVEQPPHPRGQATDPGAEDTALVPGAGSHRPSAVPSDAEPRGGARQSTREASVPPGCSNGVCKHLQRDQRDGLPVPKARRPAGCDHIQGSGWCQAGHPQGQVTASPGPHQCAVSPGWNSVGPAAGAGGGEEDAGGKAAEGLCCPAPRGRSKGDVSPLHSMSPRSKEIYKGTYQRLDSLEETIRELEITISEISSHPAAEFIFPKELLGQAVSDGSEETKAGAGHLEHSGCDGGTALDLSRPKEDAPESPSLSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885096..885213))
location: region:836766-885213:-1
so has part: feature:885096-885213:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864241-864264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X4
translation: MISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKEPVAPAPPGSRAFSLPQIVLTEWESAPPSPETEPEVPVEMGCSEHGDPAGSGGAGGELAPEAGGRCQVSAGTPRKSPSMPGGLPASAPQSQSAPSRGCEHAPGETRRFPPADSKVPSPPKRGASQPTGAEGEDTALSPARRQEGSSQTAPQGPLVEQPPHPRGQATDPGAEDTALVPGAGSHRPSAVPSDAEPRGGARQSTREASVPPGCSNGVCKHLQRDQRDGLPVPKARRPAGCDHIQGSGWCQAGHPQGQVTASPGPHQCAVSPGWNSVGPAAGAGGGEEDAGGKAAEGLCCPAPRGRSKGDVSPLHSMSPRSKEIYKGTYQRLDSLEETIRELEITISEISSHPAAEFIFPKELLGQAVSDGSEETKAGAGHLEHSGCDGGTALDLSRPKEDAPESPSLSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875409))
location: region:836766-875409:-1
so has part: feature:875149-875409:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393047.1
type: Protein
SIO_000068: ncbiprotein

position:875409:-1
position: 875409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875149-875409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864241-864264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X4
translation: MISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKEPVAPAPPGSRAFSLPQIVLTEWESAPPSPETEPEVPVEMGCSEHGDPAGSGGAGGELAPEAGGRCQVSAGTPRKSPSMPGGLPASAPQSQSAPSRGCEHAPGETRRFPPADSKVPSPPKRGASQPTGAEGEDTALSPARRQEGSSQTAPQGPLVEQPPHPRGQATDPGAEDTALVPGAGSHRPSAVPSDAEPRGGARQSTREASVPPGCSNGVCKHLQRDQRDGLPVPKARRPAGCDHIQGSGWCQAGHPQGQVTASPGPHQCAVSPGWNSVGPAAGAGGGEEDAGGKAAEGLCCPAPRGRSKGDVSPLHSMSPRSKEIYKGTYQRLDSLEETIRELEITISEISSHPAAEFIFPKELLGQAVSDGSEETKAGAGHLEHSGCDGGTALDLSRPKEDAPESPSLSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875409))
location: region:836766-875409:-1
so has part: feature:875149-875409:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:875149-875409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864241-864264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X4
translation: MISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKEPVAPAPPGSRAFSLPQIVLTEWESAPPSPETEPEVPVEMGCSEHGDPAGSGGAGGELAPEAGGRCQVSAGTPRKSPSMPGGLPASAPQSQSAPSRGCEHAPGETRRFPPADSKVPSPPKRGASQPTGAEGEDTALSPARRQEGSSQTAPQGPLVEQPPHPRGQATDPGAEDTALVPGAGSHRPSAVPSDAEPRGGARQSTREASVPPGCSNGVCKHLQRDQRDGLPVPKARRPAGCDHIQGSGWCQAGHPQGQVTASPGPHQCAVSPGWNSVGPAAGAGGGEEDAGGKAAEGLCCPAPRGRSKGDVSPLHSMSPRSKEIYKGTYQRLDSLEETIRELEITISEISSHPAAEFIFPKELLGQAVSDGSEETKAGAGHLEHSGCDGGTALDLSRPKEDAPESPSLSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875409))
location: region:836766-875409:-1
so has part: feature:875149-875409:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:875149-875409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864241-864264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X5
translation: MSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKEPVAPAPPGSRAFSLPQIVLTEWESAPPSPETEPEVPVEMGCSEHGDPAGSGGAGGELAPEAGGRCQVSAGTPRKSPSMPGGLPASAPQSQSAPSRGCEHAPGETRRFPPADSKVPSPPKRGASQPTGAEGEDTALSPARRQEGSSQTAPQGPLVEQPPHPRGQATDPGAEDTALVPGAGSHRPSAVPSDAEPRGGARQSTREASVPPGCSNGVCKHLQRDQRDGLPVPKARRPAGCDHIQGSGWCQAGHPQGQVTASPGPHQCAVSPGWNSVGPAAGAGGGEEDAGGKAAEGLCCPAPRGRSKGDVSPLHSMSPRSKEIYKGTYQRLDSLEETIRELEITISEISSHPAAEFIFPKELLGQAVSDGSEETKAGAGHLEHSGCDGGTALDLSRPKEDAPESPSLSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..852917))
location: region:836766-852917:-1
so has part: feature:852815-852917:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393049.1
type: Protein
SIO_000068: ncbiprotein

position:852917:-1
position: 852917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852815-852917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X5
translation: MSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKEPVAPAPPGSRAFSLPQIVLTEWESAPPSPETEPEVPVEMGCSEHGDPAGSGGAGGELAPEAGGRCQVSAGTPRKSPSMPGGLPASAPQSQSAPSRGCEHAPGETRRFPPADSKVPSPPKRGASQPTGAEGEDTALSPARRQEGSSQTAPQGPLVEQPPHPRGQATDPGAEDTALVPGAGSHRPSAVPSDAEPRGGARQSTREASVPPGCSNGVCKHLQRDQRDGLPVPKARRPAGCDHIQGSGWCQAGHPQGQVTASPGPHQCAVSPGWNSVGPAAGAGGGEEDAGGKAAEGLCCPAPRGRSKGDVSPLHSMSPRSKEIYKGTYQRLDSLEETIRELEITISEISSHPAAEFIFPKELLGQAVSDGSEETKAGAGHLEHSGCDGGTALDLSRPKEDAPESPSLSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQAARPSKEASETSPAVSEKPASGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(836766..836891,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..852917))
location: region:836766-852917:-1
so has part: feature:852815-852917:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:836766-836891:-1:exon

XP_040393050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:852815-852917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:836766-836891:-1:exon

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1 isoform X3
translation: MLPRWAKHPFGASPRAAPRLREQERPSEPGDCRLTPLLVDPDRTSTHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKSEMERKRDAFMDHLKNKYPQHALALRGQQERMRDQQPNYWSFKTRSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFNRMNRFRQSLPLSRSTSQTKLRSPGVLFLQFGDETRRVHITHEISSMDTLHALIVHMFPQKLTMGMLKSPNTAILIKDESRNVFYELEDVRDIQDRSIIKIYRKEPLYASFPASHITNGDLRREMVYTSRESSPTRRLNNMSPASHLASSSPPPVLQSSSPSRSRMSYSGGRPPSYAGSPVHHGERLSNLPPAPGVSPSPSAILERRDVKPDEDLAGKNMVLVKNEGLYADPYSMVHEGRLSITSTQSLAGMGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKPNAQMYSDTYGPGLGFRMPPSSPQKMADGRLVDVQPGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVSKPRNPSASGPPELFPGPSDRPLSGFSSPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGMGTPVPAPPPPSATSTPAGQPTAITRLHMQLHLHDLQQNASDLRNQLQQLKKLQLQNQETVKTMLRRTETEISVRVTDTMRKHEDPLQRQRSLVEEERLRYLNEEELITQQLNDLEKSVEKIQKDLAHNHRLIPVQELEEKAVVLKQLGETLTDLKAQFPSLQSKMRVVLRVEVEAVKFLKEEPNRLDGLLKRCKTVTDTLAQIRRQVDEGVWTPPNTLSQSPKKMAPETDFSKGLDLEMPTSPPVSLHHLTAATETLGMPSFGHSPPQTQTHPSKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLDFAAKHKQATGGSSAASTPEHKPSKPQHAQKSAGKADPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGLTTTRSGEVIVTSKKEPGFMKKAESEELETQKPQVKLRRTVSEVVRPASTPPIIASAIKDDDDEDRIIAELEVFQRSSASPFIPKLRYDPPAAAVSPGHADMWPNGASVAAEGWKEPVAPAPPGSRAFSLPQIVLTEWESAPPSPETEPEVPVEMGCSEHGDPAGSGGAGGELAPEAGGRCQVSAGTPRKSPSMPGGLPASAPQSQSAPSRGCEHAPGETRRFPPADSKVPSPPKRGASQPTGAEGEDTALSPARRQEGSSQTAPQGPLVEQPPHPRGQATDPGAEDTALVPGAGSHRPSAVPSDAEPRGGARQSTREASVPPGCSNGVCKHLQRDQRDGLPVPKARRPAGCDHIQGSGWCQAGHPQGQVTASPGPHQCAVSPGWNSVGPAAGAGGGEEDAGGKAAEGLCCPAPRGRSKGDVSPLHSMSPRSKEIYKGTYQRLDSLEETIRELEITISEISSHPAAEFIFPKELLGQAVSDGSEETKAGAGHLEHSGCDGGTALDLSRPKEDAPESPSLSQTKPPLLPKPQLPLSSPQSGGVSIPAMKMVNPASRLKQSQQGSPDKSKHIKQRMEYMRIQGQQQ
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: complement(join(837121..837123,839358..839495,841936..843204,844547..844675,845071..845223,845312..845466,845755..846004,846387..846699,847655..847802,848731..848861,849102..849277,849424..849602,849926..849969,850080..850172,850551..851380,851790..851883,852466..852664,852815..853007,864241..864264,875149..875432,885096..885213))
location: region:837121-885213:-1
so has part: feature:885096-885213:-1:exon
so has part: feature:875149-875432:-1:exon
so has part: feature:864241-864264:-1:exon
so has part: feature:852815-853007:-1:exon
so has part: feature:852466-852664:-1:exon
so has part: feature:851790-851883:-1:exon
so has part: feature:850551-851380:-1:exon
so has part: feature:850080-850172:-1:exon
so has part: feature:849926-849969:-1:exon
so has part: feature:849424-849602:-1:exon
so has part: feature:849102-849277:-1:exon
so has part: feature:848731-848861:-1:exon
so has part: feature:847655-847802:-1:exon
so has part: feature:846387-846699:-1:exon
so has part: feature:845755-846004:-1:exon
so has part: feature:845312-845466:-1:exon
so has part: feature:845071-845223:-1:exon
so has part: feature:844547-844675:-1:exon
so has part: feature:841936-843204:-1:exon
so has part: feature:839358-839495:-1:exon
so has part: feature:837121-837123:-1:exon

XP_040393046.1
type: Protein
SIO_000068: ncbiprotein

position:837121:-1
position: 837121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885096-885213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875149-875432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864241-864264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852815-853007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852466-852664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851790-851883:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850551-851380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850080-850172:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849926-849969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849424-849602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849102-849277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:848731-848861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847655-847802:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846387-846699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845755-846004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845312-845466:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845071-845223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844547-844675:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:841936-843204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:839358-839495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:837121-837123:-1:exon

LOC121059908
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(933181..936038)
location: region:933181-936038:-1
so has part: feature:933181-936038:-1:exon
subclass of: SO_0000010

121059908
type: Gene
SIO_000068: ncbigene

position:933181:-1
position: 933181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936038:-1
position: 936038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933181-936038:-1:exon

LOC121059908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059908
product: elongin BC and polycomb repressive complex 2 associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040537123.1
SIO_010081: LOC121059908
subclass of: SO_0000673
so part of: LOC121059908
location: complement(933181..936038)
location: region:933181-936038:-1
so has part: feature:933181-936038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:933181-936038:-1:exon

LOC121059908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin BC and Polycomb repressive complex 2-associated protein
translation: MFLTCEGTFGIVPATMDYNGEARPGDFHAGYQEIEGINLGYLQINGTQMFALAQVLSDLFKDIPRTTISKKMETLKIKSRRCDLKELRTLKAIHSVPTRAVKCSLISKADLEALCTSCKSLSPRRRKRKRKSKRREQLLLPDPGELFACPRPQLLPPCRAGACCAPAAPGRPKLPPALAKARSAPAALLPQPFHHRPFPGLERAPRGRRGCGLAERGGLFGGALGAYPRDLALLHPAAAHPAAHPAALAEPGRRKRGPCCAKGLFPAEKGPGGARKGRSSAFPGSKRQGTSAGYSSDSDSSLDFGGSSPATSSDSSEEEEEEEEEEEEEEGDTSCSSEEGSSSESESSSLCSGDSVQSTRYRQAALPRFQPQPPREPLGDERPAEPPPGAGKALRPDPDLLFLSQQLWARTLRASTSESLSPAPALGSGAQPQPELYAKQEASPSSSSSSSSSSSSSSSSSSSSSSSSSSSPPPSPSSTPGGDPQQKEGGFGDAEPCAKGKDLHKDASNNRASLGPSDQAERQSEALAGRAASQEPAPGSAPQPPAPELAGSLGPAPPGEAGEPRREHFDRLIRQSKLWCYAKGFNVDGKSLRHGGRTEPCKAAELKSPGSKRAESPSTLSNKALKGNGSERNAKRRRLARGAEAERQQSSSKGRPQKTQRRNAKKGNTHCKRLGSAGPTPPRNSFSLMGNFPCIPSLVVGEDGDLCPASSLGVKNSWALSKTHPLWSWHLGGNAIPVPPSLKFRGYSLEDL
SIO_010081: LOC121059908
subclass of: SO_0000673
so part of: LOC121059908
location: complement(933181..935439)
location: region:933181-935439:-1
so has part: feature:933181-935439:-1:exon

XP_040393057.1
type: Protein
SIO_000068: ncbiprotein

position:935439:-1
position: 935439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933181-935439:-1:exon

MLLT6
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 953870..997574
location: region:953870-997574:1
so has part: feature:953870-997574:1:exon
subclass of: SO_0000010

121059909
type: Gene
SIO_000068: ncbigene

position:953870:1
position: 953870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997574:1
position: 997574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953870-997574:1:exon

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040537125.1
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(953870..954131,957632..957711,962802..962856,964430..964539,964995..965098,965808..965901,967118..967222,976230..976328,983226..983400,984170..984772,986118..986302,987066..987183,990684..990750,991050..991192,991474..991662,991854..991942,992349..992704,992838..992946,994351..994731,995576..997574)
location: region:953870-997574:1
so has part: feature:953870-954131:1:exon
so has part: feature:957632-957711:1:exon
so has part: feature:962802-962856:1:exon
so has part: feature:964430-964539:1:exon
so has part: feature:964995-965098:1:exon
so has part: feature:965808-965901:1:exon
so has part: feature:967118-967222:1:exon
so has part: feature:976230-976328:1:exon
so has part: feature:983226-983400:1:exon
so has part: feature:984170-984772:1:exon
so has part: feature:986118-986302:1:exon
so has part: feature:987066-987183:1:exon
so has part: feature:990684-990750:1:exon
so has part: feature:991050-991192:1:exon
so has part: feature:991474-991662:1:exon
so has part: feature:991854-991942:1:exon
so has part: feature:992349-992704:1:exon
so has part: feature:992838-992946:1:exon
so has part: feature:994351-994731:1:exon
so has part: feature:995576-997574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:953870-954131:1:exon

position:954131:1
position: 954131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957632-957711:1:exon

position:957632:1
position: 957632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957711:1
position: 957711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:962802-962856:1:exon

position:962802:1
position: 962802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962856:1
position: 962856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:964430-964539:1:exon

position:964430:1
position: 964430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964539:1
position: 964539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:964995-965098:1:exon

position:964995:1
position: 964995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965098:1
position: 965098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:965808-965901:1:exon

position:965808:1
position: 965808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965901:1
position: 965901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:967118-967222:1:exon

position:967118:1
position: 967118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967222:1
position: 967222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:976230-976328:1:exon

position:976230:1
position: 976230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976328:1
position: 976328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:983226-983400:1:exon

position:983226:1
position: 983226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983400:1
position: 983400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:984170-984772:1:exon

position:984170:1
position: 984170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984772:1
position: 984772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:986118-986302:1:exon

position:986118:1
position: 986118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986302:1
position: 986302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:987066-987183:1:exon

position:987066:1
position: 987066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987183:1
position: 987183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:990684-990750:1:exon

position:990684:1
position: 990684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990750:1
position: 990750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:991050-991192:1:exon

position:991050:1
position: 991050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991192:1
position: 991192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:991474-991662:1:exon

position:991474:1
position: 991474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991662:1
position: 991662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:991854-991942:1:exon

position:991854:1
position: 991854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991942:1
position: 991942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:992349-992704:1:exon

position:992349:1
position: 992349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992704:1
position: 992704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:992838-992946:1:exon

position:992838:1
position: 992838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992946:1
position: 992946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:994351-994731:1:exon

position:994351:1
position: 994351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994731:1
position: 994731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:995576-997574:1:exon

position:995576:1
position: 995576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040537124.1
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(953924..954131,957632..957711,962802..962856,964430..964539,964995..965098,965808..965901,967115..967222,976230..976328,983226..983400,984170..984772,986118..986302,987066..987183,990684..990750,991050..991192,991474..991662,991854..991942,992349..992704,992838..992946,994351..994731,995576..997574)
location: region:953924-997574:1
so has part: feature:953924-954131:1:exon
so has part: feature:957632-957711:1:exon
so has part: feature:962802-962856:1:exon
so has part: feature:964430-964539:1:exon
so has part: feature:964995-965098:1:exon
so has part: feature:965808-965901:1:exon
so has part: feature:967115-967222:1:exon
so has part: feature:976230-976328:1:exon
so has part: feature:983226-983400:1:exon
so has part: feature:984170-984772:1:exon
so has part: feature:986118-986302:1:exon
so has part: feature:987066-987183:1:exon
so has part: feature:990684-990750:1:exon
so has part: feature:991050-991192:1:exon
so has part: feature:991474-991662:1:exon
so has part: feature:991854-991942:1:exon
so has part: feature:992349-992704:1:exon
so has part: feature:992838-992946:1:exon
so has part: feature:994351-994731:1:exon
so has part: feature:995576-997574:1:exon

position:953924:1
position: 953924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953924-954131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957632-957711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962802-962856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964430-964539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964995-965098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:965808-965901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967115-967222:1:exon

position:967115:1
position: 967115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:976230-976328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:983226-983400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:984170-984772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986118-986302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987066-987183:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:990684-990750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:991050-991192:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:991474-991662:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:991854-991942:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:992349-992704:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:992838-992946:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:994351-994731:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:995576-997574:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X1
translation: MKEMVGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMKTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPAPVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGGSSSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPPNVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGAQQVNGLARVAGSGLGGGTAASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQAAQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(954023..954131,957632..957711,962802..962856,964430..964539,964995..965098,965808..965901,967115..967222,976230..976328,983226..983400,984170..984772,986118..986302,987066..987183,990684..990750,991050..991192,991474..991662,991854..991942,992349..992704,992838..992946,994351..994731,995576..995620)
location: region:954023-995620:1
so has part: feature:954023-954131:1:exon
so has part: feature:957632-957711:1:exon
so has part: feature:962802-962856:1:exon
so has part: feature:964430-964539:1:exon
so has part: feature:964995-965098:1:exon
so has part: feature:965808-965901:1:exon
so has part: feature:967115-967222:1:exon
so has part: feature:976230-976328:1:exon
so has part: feature:983226-983400:1:exon
so has part: feature:984170-984772:1:exon
so has part: feature:986118-986302:1:exon
so has part: feature:987066-987183:1:exon
so has part: feature:990684-990750:1:exon
so has part: feature:991050-991192:1:exon
so has part: feature:991474-991662:1:exon
so has part: feature:991854-991942:1:exon
so has part: feature:992349-992704:1:exon
so has part: feature:992838-992946:1:exon
so has part: feature:994351-994731:1:exon
so has part: feature:995576-995620:1:exon

XP_040393058.1
type: Protein
SIO_000068: ncbiprotein

position:954023:1
position: 954023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995620:1
position: 995620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954023-954131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957632-957711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962802-962856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964430-964539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964995-965098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:965808-965901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967115-967222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976230-976328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:983226-983400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:984170-984772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986118-986302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987066-987183:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:990684-990750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:991050-991192:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:991474-991662:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:991854-991942:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:992349-992704:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:992838-992946:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:994351-994731:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:995576-995620:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X2
translation: MKEMVGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPAPVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGGSSSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPPNVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGAQQVNGLARVAGSGLGGGTAASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQAAQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(954023..954131,957632..957711,962802..962856,964430..964539,964995..965098,965808..965901,967118..967222,976230..976328,983226..983400,984170..984772,986118..986302,987066..987183,990684..990750,991050..991192,991474..991662,991854..991942,992349..992704,992838..992946,994351..994731,995576..995620)
location: region:954023-995620:1
so has part: feature:954023-954131:1:exon
so has part: feature:957632-957711:1:exon
so has part: feature:962802-962856:1:exon
so has part: feature:964430-964539:1:exon
so has part: feature:964995-965098:1:exon
so has part: feature:965808-965901:1:exon
so has part: feature:967118-967222:1:exon
so has part: feature:976230-976328:1:exon
so has part: feature:983226-983400:1:exon
so has part: feature:984170-984772:1:exon
so has part: feature:986118-986302:1:exon
so has part: feature:987066-987183:1:exon
so has part: feature:990684-990750:1:exon
so has part: feature:991050-991192:1:exon
so has part: feature:991474-991662:1:exon
so has part: feature:991854-991942:1:exon
so has part: feature:992349-992704:1:exon
so has part: feature:992838-992946:1:exon
so has part: feature:994351-994731:1:exon
so has part: feature:995576-995620:1:exon

XP_040393059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:954023-954131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957632-957711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962802-962856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964430-964539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964995-965098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:965808-965901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967118-967222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976230-976328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:983226-983400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:984170-984772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986118-986302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987066-987183:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:990684-990750:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:991050-991192:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:991474-991662:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:991854-991942:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:992349-992704:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:992838-992946:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:994351-994731:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:995576-995620:1:exon

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MLLT6
product: MLLT6, PHD finger containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040537126.1
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(957738..961782,962802..962856,964430..964539,964995..965098,965808..965901,967115..967222,976230..976328,983226..983400,984170..984772,986118..986302,987066..987183,990684..990750,991050..991192,991474..991662,991854..991942,992349..992704,992838..992946,994351..994731,995576..997574)
location: region:957738-997574:1
so has part: feature:957738-961782:1:exon
so has part: feature:962802-962856:1:exon
so has part: feature:964430-964539:1:exon
so has part: feature:964995-965098:1:exon
so has part: feature:965808-965901:1:exon
so has part: feature:967115-967222:1:exon
so has part: feature:976230-976328:1:exon
so has part: feature:983226-983400:1:exon
so has part: feature:984170-984772:1:exon
so has part: feature:986118-986302:1:exon
so has part: feature:987066-987183:1:exon
so has part: feature:990684-990750:1:exon
so has part: feature:991050-991192:1:exon
so has part: feature:991474-991662:1:exon
so has part: feature:991854-991942:1:exon
so has part: feature:992349-992704:1:exon
so has part: feature:992838-992946:1:exon
so has part: feature:994351-994731:1:exon
so has part: feature:995576-997574:1:exon

position:957738:1
position: 957738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957738-961782:1:exon

position:961782:1
position: 961782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:962802-962856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964430-964539:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964995-965098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965808-965901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967115-967222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976230-976328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:983226-983400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:984170-984772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986118-986302:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987066-987183:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990684-990750:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:991050-991192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:991474-991662:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:991854-991942:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:992349-992704:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:992838-992946:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:994351-994731:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:995576-997574:1:exon

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AF-17 isoform X3
translation: MEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFNKMKTSRHSGGSSFIAGRRSRSTSPAQEKHVSHHERPKKSRKDKERPKQKHKKRPESPTSLTPAPVPVAAEKGSTSHHEGSKETSEVGRSEVKGKKSSSHGSSHKGKKTGSGKSSAGFSSASSSGTFQPAGTSCSSLQCSQDFVTFPKLEQDDEKYRKPVSSSSSSHCSPLYEGQKGDIFEQKVIFSGFGSIMRFSTSAVSQQRGRDASPVDYKASNPVSGPSVGSSGAAGGGSSSSSSHKRMPSLSMEEGEVLKEKKHKGSKKNKHGPGRPKGGKSKEILGAQLAGSTSTSSSPFSGGSLVSSSISNSSRPFSHTGNLPSLSMESPLLSSGIYTSNKDPISHGGGVLRAVCSTPLSSSLLAHQGTSSLPQLNRSPFASTIPASSSSSVSTTQVFSLAGSTFSLPSSHIFGSPLTSGLSINPLLNQSESSRAEPDLEDCSFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLENVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPVVTSSNGPGSQAQYILPPNVCNNDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQQSPASLPLPGAQQVNGLARVAGSGLGGGTAASHSLSTVPMVDGLMGTLAGGQQMPINGILGNLNGAQAAQPPSALTQASGPPTLQLSTSLSSVPSLSPLTEQQRHVLHQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMTSSSQLSMSSLLAATSAPLLHSSTSALMTSAPQAPPSSSSLMASLSPQQLNPSNALLAPQATPPLSAPGNSLMASGTGIPPVLTAQTNPFLNLQADGNTPKGTSMNEKGAPLTQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: join(964492..964539,964995..965098,965808..965901,967115..967222,976230..976328,983226..983400,984170..984772,986118..986302,987066..987183,990684..990750,991050..991192,991474..991662,991854..991942,992349..992704,992838..992946,994351..994731,995576..995620)
location: region:964492-995620:1
so has part: feature:964492-964539:1:exon
so has part: feature:964995-965098:1:exon
so has part: feature:965808-965901:1:exon
so has part: feature:967115-967222:1:exon
so has part: feature:976230-976328:1:exon
so has part: feature:983226-983400:1:exon
so has part: feature:984170-984772:1:exon
so has part: feature:986118-986302:1:exon
so has part: feature:987066-987183:1:exon
so has part: feature:990684-990750:1:exon
so has part: feature:991050-991192:1:exon
so has part: feature:991474-991662:1:exon
so has part: feature:991854-991942:1:exon
so has part: feature:992349-992704:1:exon
so has part: feature:992838-992946:1:exon
so has part: feature:994351-994731:1:exon
so has part: feature:995576-995620:1:exon

XP_040393060.1
type: Protein
SIO_000068: ncbiprotein

position:964492:1
position: 964492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964492-964539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964995-965098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:965808-965901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967115-967222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976230-976328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:983226-983400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:984170-984772:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986118-986302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987066-987183:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:990684-990750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:991050-991192:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:991474-991662:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:991854-991942:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:992349-992704:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:992838-992946:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:994351-994731:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:995576-995620:1:exon

PCGF2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(997722..1012822)
location: region:997722-1012822:-1
so has part: feature:997722-1012822:-1:exon
subclass of: SO_0000010

121059910
type: Gene
SIO_000068: ncbigene

position:997722:-1
position: 997722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012822:-1
position: 1012822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997722-1012822:-1:exon

PCGF2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: PCGF2
product: polycomb group ring finger 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005814682.1
SIO_010081: PCGF2
so part of: PCGF2
location: complement(join(997722..998896,1003816..1005625,1006040..1006120,1006455..1006553,1006727..1006775,1007287..1007395,1007477..1007527,1007777..1007832,1009581..1009677,1009856..1011305))
location: region:997722-1011305:-1
so has part: feature:1009856-1011305:-1:exon
so has part: feature:1009581-1009677:-1:exon
so has part: feature:1007777-1007832:-1:exon
so has part: feature:1007477-1007527:-1:exon
so has part: feature:1007287-1007395:-1:exon
so has part: feature:1006727-1006775:-1:exon
so has part: feature:1006455-1006553:-1:exon
so has part: feature:1006040-1006120:-1:exon
so has part: feature:1003816-1005625:-1:exon
so has part: feature:997722-998896:-1:exon

position:1011305:-1
position: 1011305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009856-1011305:-1:exon

position:1009856:-1
position: 1009856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009581-1009677:-1:exon

position:1009581:-1
position: 1009581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009677:-1
position: 1009677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1007777-1007832:-1:exon

position:1007777:-1
position: 1007777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007832:-1
position: 1007832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007477-1007527:-1:exon

position:1007477:-1
position: 1007477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007527:-1
position: 1007527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1007287-1007395:-1:exon

position:1007287:-1
position: 1007287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007395:-1
position: 1007395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1006727-1006775:-1:exon

position:1006727:-1
position: 1006727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006775:-1
position: 1006775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1006455-1006553:-1:exon

position:1006455:-1
position: 1006455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006553:-1
position: 1006553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1006040-1006120:-1:exon

position:1006040:-1
position: 1006040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006120:-1
position: 1006120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1003816-1005625:-1:exon

position:1003816:-1
position: 1003816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005625:-1
position: 1005625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:997722-998896:-1:exon

position:998896:-1
position: 998896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059912
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 999186..1002366
location: region:999186-1002366:1
so has part: feature:999186-1002366:1:exon
subclass of: SO_0000011

121059912
type: Gene
SIO_000068: ncbigene

position:999186:1
position: 999186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002366:1
position: 1002366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999186-1002366:1:exon

LOC121059912
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059912
product: uncharacterized LOC121059912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814683.1
SIO_010081: LOC121059912
subclass of: SO_0000673
so part of: LOC121059912
location: join(999186..1002277,1002310..1002366)
location: region:999186-1002366:1
so has part: feature:999186-1002277:1:exon
so has part: feature:1002310-1002366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:999186-1002277:1:exon

position:1002277:1
position: 1002277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1002310-1002366:1:exon

position:1002310:1
position: 1002310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CISD3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CISD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1002495..1003463
location: region:1002495-1003463:1
so has part: feature:1002495-1003463:1:exon
subclass of: SO_0000010

121059911
type: Gene
SIO_000068: ncbigene

position:1002495:1
position: 1002495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003463:1
position: 1003463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002495-1003463:1:exon

CISD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CISD3
product: CDGSH iron sulfur domain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040537133.1
SIO_010081: CISD3
subclass of: SO_0000673
so part of: CISD3
location: join(1002495..1002730,1002979..1003463)
location: region:1002495-1003463:1
so has part: feature:1002495-1002730:1:exon
so has part: feature:1002979-1003463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002495-1002730:1:exon

position:1002730:1
position: 1002730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1002979-1003463:1:exon

position:1002979:1
position: 1002979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CISD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CISD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDGSH iron-sulfur domain-containing protein 3, mitochondrial
translation: MLRLGAAALRAGRDRAPPGALRGPALSSAPSAPSSAPPQPLVVELKAGKKYAWCSCGHSKTQPFCDGSHRTAAPGVSPLRFTAEADGAAPLCVCKRTRSPPYCDGSHREHREQAAPPGPRP
SIO_010081: CISD3
subclass of: SO_0000673
so part of: CISD3
location: join(1002545..1002730,1002979..1003158)
location: region:1002545-1003158:1
so has part: feature:1002545-1002730:1:exon
so has part: feature:1002979-1003158:1:exon

XP_040393067.1
type: Protein
SIO_000068: ncbiprotein

position:1002545:1
position: 1002545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003158:1
position: 1003158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002545-1002730:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002979-1003158:1:exon

PCGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PCGF2
product: polycomb group ring finger 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040537129.1
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(1004149..1005625,1006040..1006120,1006455..1006550,1006727..1006775,1007287..1007395,1007477..1007527,1007777..1007832,1009581..1009677,1009856..1009995,1012709..1012822))
location: region:1004149-1012822:-1
so has part: feature:1012709-1012822:-1:exon
so has part: feature:1009856-1009995:-1:exon
so has part: feature:1009581-1009677:-1:exon
so has part: feature:1007777-1007832:-1:exon
so has part: feature:1007477-1007527:-1:exon
so has part: feature:1007287-1007395:-1:exon
so has part: feature:1006727-1006775:-1:exon
so has part: feature:1006455-1006550:-1:exon
so has part: feature:1006040-1006120:-1:exon
so has part: feature:1004149-1005625:-1:exon

position:1004149:-1
position: 1004149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012709-1012822:-1:exon

position:1012709:-1
position: 1012709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009856-1009995:-1:exon

position:1009995:-1
position: 1009995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1009581-1009677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007777-1007832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007477-1007527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1007287-1007395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006727-1006775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006455-1006550:-1:exon

position:1006550:-1
position: 1006550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1006040-1006120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1004149-1005625:-1:exon

PCGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PCGF2
product: polycomb group ring finger 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040537128.1
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: complement(join(1004149..1005625,1006040..1006120,1006455..1006553,1006727..1006775,1007287..1007395,1007477..1007527,1007777..1007832,1009581..1009677,1009856..1009995,1012709..1012766))
location: region:1004149-1012766:-1
so has part: feature:1012709-1012766:-1:exon
so has part: feature:1009856-1009995:-1:exon
so has part: feature:1009581-1009677:-1:exon
so has part: feature:1007777-1007832:-1:exon
so has part: feature:1007477-1007527:-1:exon
so has part: feature:1007287-1007395:-1:exon
so has part: feature:1006727-1006775:-1:exon
so has part: feature:1006455-1006553:-1:exon
so has part: feature:1006040-1006120:-1:exon
so has part: feature:1004149-1005625:-1:exon

position:1012766:-1
position: 1012766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012709-1012766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009856-1009995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009581-1009677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007777-1007832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007477-1007527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1007287-1007395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006727-1006775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006455-1006553:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006040-1006120:-1:exon