Cygnus olor isolate bCygOlo1 chromosome 24, bCygOlo1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Cygnus olor isolate bCygOlo1 chromosome 24, bCygOlo1.pri.v2, whole genome shotgun sequence.
sequence version: NC_049192.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_049192.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA642912
dblink: SAMN12621369
keyword: WGS
keyword: RefSeq
source: Cygnus olor (mute swan)
organism: Cygnus olor
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020088.2.\nAssembly name: bCygOlo1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/31. The original whole-genome shotgun project has the\naccession WNMI00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v. 1.0.3+\n 1.Nov.2018; scaff10x v. 4.1.0; Bionano\n solve v. 3.2.1_04122018; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2020-11-30; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bCygOlo1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.23x\nSequencing Technology :: PacBio Sequel 1 CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cygnus olor Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7030567
topology: linear
so has quality: SO_0000987
location: 1..7030567
location: region:1-7030567:1
RO_0002162: 8869

NC_049192
type: RefSeq
SIO_000068: refseq

PRJNA642912
type: BioProject
SIO_000068: bioproject

SAMN12621369
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7030567:1
position: 7030567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7030567:1:source
so part of: sequence
organism: Cygnus olor
mol type: genomic DNA
isolate: bCygOlo1
chromosome: 24
sex: male
tissue type: muscle
dev stage: adult
country: Germany: Mainau
lat lon: 50.149850 N 11.063270 E
collection date: 2015-07-01
collected by: Robert Kraus

8869
type: Taxonomy
SIO_000068: taxonomy

LOC121059350
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20039..163242)
location: region:20039-163242:-1
so has part: feature:20039-163242:-1:exon
subclass of: SO_0000010

121059350
type: Gene
SIO_000068: ncbigene

position:20039:-1
position: 20039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163242:-1
position: 163242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20039-163242:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814499.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(20039..22357,22476..22577,24119..24217,25835..25990,92124..92311,131574..131663,133693..137097))
location: region:20039-137097:-1
so has part: feature:133693-137097:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24119-24217:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:20039-22357:-1:exon

position:137097:-1
position: 137097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-137097:-1:exon

position:133693:-1
position: 133693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

position:131574:-1
position: 131574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131663:-1
position: 131663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

position:92124:-1
position: 92124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92311:-1
position: 92311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25835-25990:-1:exon

position:25835:-1
position: 25835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25990:-1
position: 25990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24217:-1:exon

position:24119:-1
position: 24119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24217:-1
position: 24217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

position:22476:-1
position: 22476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22577:-1
position: 22577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:20039-22357:-1:exon

position:22357:-1
position: 22357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059350
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040536114.1
SIO_010081: LOC121059350
subclass of: SO_0000673
so part of: LOC121059350
location: complement(join(20433..21583,22476..22577,24119..24217,25835..25990,58251..58388,111589..111643,112694..112913))
location: region:20433-112913:-1
so has part: feature:112694-112913:-1:exon
so has part: feature:111589-111643:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24119-24217:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:20433-21583:-1:exon

position:20433:-1
position: 20433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112913:-1
position: 112913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112694-112913:-1:exon

position:112694:-1
position: 112694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111589-111643:-1:exon

position:111589:-1
position: 111589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111643:-1
position: 111643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58251-58388:-1:exon

position:58251:-1
position: 58251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58388:-1
position: 58388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25835-25990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20433-21583:-1:exon

position:21583:-1
position: 21583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121059350
translation: MKKLCMAESSWGNRLLSSLHQAQYHAIASCRPAPPHQGTPMPSRQGSSWHSAKHGQVPLPLRRDWLVELREPQTLSEFFTVQMNYCSQMLNASPAPQSFHGDSRNTGCPAWLPLAPGPTLKQVDDSQATVSTKEEAGRETKKEASSTSTISHCTYPSMLLAPYSPLPFSSSITAICICLIFPCKSLCPAA
SIO_010081: LOC121059350
subclass of: SO_0000673
so part of: LOC121059350
location: complement(join(21377..21583,22476..22577,24119..24217,25835..25990,58251..58259))
location: region:21377-58259:-1
so has part: feature:58251-58259:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24119-24217:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:21377-21583:-1:exon

XP_040392048.1
type: Protein
SIO_000068: ncbiprotein

position:21377:-1
position: 21377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58259:-1
position: 58259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58251-58259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25835-25990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24119-24217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21377-21583:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814506.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,25835..25990,47139..47209,58251..58388,92124..92311,131574..131663,162290..162467,162779..163242))
location: region:22142-163242:-1
so has part: feature:162779-163242:-1:exon
so has part: feature:162290-162467:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:22142:-1
position: 22142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162779-163242:-1:exon

position:162779:-1
position: 162779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:162290-162467:-1:exon

position:162290:-1
position: 162290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162467:-1
position: 162467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47139-47209:-1:exon

position:47139:-1
position: 47139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47209:-1
position: 47209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:25835-25990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24294-24480:-1:exon

position:24294:-1
position: 24294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24480:-1
position: 24480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24119-24214:-1:exon

position:24214:-1
position: 24214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814524.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,25835..25990,47139..47209,58251..58388,131574..131663,133693..137114))
location: region:22142-137114:-1
so has part: feature:133693-137114:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:137114:-1
position: 137114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-137114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25835-25990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814513.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,25835..25990,47139..47209,58251..58388,59298..59395,92124..92311,131574..131663,133693..137106))
location: region:22142-137106:-1
so has part: feature:133693-137106:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:59298-59395:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:137106:-1
position: 137106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-137106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59298-59395:-1:exon

position:59298:-1
position: 59298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59395:-1
position: 59395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25835-25990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814531.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,47139..47209,131574..131663,133693..137103))
location: region:22142-137103:-1
so has part: feature:133693-137103:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:137103:-1
position: 137103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-137103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814520.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,47139..47209,58320..58388,59298..59395,92124..92311,131574..131663,133693..137101))
location: region:22142-137101:-1
so has part: feature:133693-137101:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:59298-59395:-1:exon
so has part: feature:58320-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:137101:-1
position: 137101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-137101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59298-59395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58320-58388:-1:exon

position:58320:-1
position: 58320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814515.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,25835..25990,47139..47209,58320..58388,92124..92311,131574..131663,133693..137100))
location: region:22142-137100:-1
so has part: feature:133693-137100:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58320-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
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so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:137100:-1
position: 137100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-137100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 6
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SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814507.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,25835..25990,47139..47209,58251..58388,92124..92311,131574..131663,133693..137098))
location: region:22142-137098:-1
so has part: feature:133693-137098:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
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position:137098:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:133693-137098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

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SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

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SIO_000300: 4
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urn:…
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LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814500.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,25835..25990,47139..47209,58251..58388,92124..92311,131574..131663,133693..137098))
location: region:22142-137098:-1
so has part: feature:133693-137098:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24294-24480:-1:exon
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so has part: feature:22142-22357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133693-137098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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urn:…
SIO_000300: 10
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LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814510.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,24119..24214,25835..25990,47139..47209,58251..58388,92124..92311,131574..131663,133693..137095))
location: region:22142-137095:-1
so has part: feature:133693-137095:-1:exon
so has part: feature:131574-131663:-1:exon
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so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22142-22357:-1:exon

position:137095:-1
position: 137095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-137095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814503.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,24119..24214,24294..24480,25835..25990,47139..47209,58251..58388,92124..92311,131574..131663,133693..137095))
location: region:22142-137095:-1
so has part: feature:133693-137095:-1:exon
so has part: feature:131574-131663:-1:exon
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so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:133693-137095:-1:exon

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SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

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SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 8
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814509.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,24119..24217,25835..25990,47139..47209,58251..58388,92124..92311,131574..131663,133693..135255))
location: region:22142-135255:-1
so has part: feature:133693-135255:-1:exon
so has part: feature:131574-131663:-1:exon
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so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
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position:135255:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:133693-135255:-1:exon

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SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 5
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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814511.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24217,47139..47209,58251..58388,92124..92311,131574..131663,133693..135253))
location: region:22142-135253:-1
so has part: feature:133693-135253:-1:exon
so has part: feature:131574-131663:-1:exon
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so has part: feature:58251-58388:-1:exon
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position:135253:-1
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reference: sequence
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urn:…
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SIO_000628: feature:133693-135253:-1:exon

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SIO_000300: 2
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SIO_000300: 3
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urn:…
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LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814512.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,47139..47209,58251..58388,92124..92311,131574..131663,133693..135252))
location: region:22142-135252:-1
so has part: feature:133693-135252:-1:exon
so has part: feature:131574-131663:-1:exon
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so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24119-24214:-1:exon
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position:135252:-1
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reference: sequence
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urn:…
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SIO_000628: feature:133693-135252:-1:exon

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SIO_000300: 8
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LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814514.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,47139..47209,58320..58388,92124..92311,131574..131663,133693..135250))
location: region:22142-135250:-1
so has part: feature:133693-135250:-1:exon
so has part: feature:131574-131663:-1:exon
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position:135250:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
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SIO_000628: feature:133693-135250:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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urn:…
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SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814508.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,25835..25990,47139..47209,92124..92311,131574..131663,133693..135245))
location: region:22142-135245:-1
so has part: feature:133693-135245:-1:exon
so has part: feature:131574-131663:-1:exon
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so has part: feature:24119-24214:-1:exon
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position:135245:-1
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reference: sequence
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urn:…
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SIO_000628: feature:133693-135245:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 8
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urn:…
SIO_000300: 9
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LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814518.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,58251..58388,92124..92311,131574..131663,133693..135243))
location: region:22142-135243:-1
so has part: feature:133693-135243:-1:exon
so has part: feature:131574-131663:-1:exon
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so has part: feature:22142-22357:-1:exon

position:135243:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

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SIO_000300: 4
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SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 7
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LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814516.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24217,58251..58388,92124..92311,131574..131663,133693..135243))
location: region:22142-135243:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:133693-135243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814504.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,47139..47209,58251..58388,92124..92311,131574..131663,133693..135242))
location: region:22142-135242:-1
so has part: feature:133693-135242:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:135242:-1
position: 135242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814537.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,92124..92311,131574..131663,133693..135241))
location: region:22142-135241:-1
so has part: feature:133693-135241:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:135241:-1
position: 135241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814519.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,24119..24214,47139..47209,58251..58388,92124..92311,131574..131663,133693..135240))
location: region:22142-135240:-1
so has part: feature:133693-135240:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22142-22357:-1:exon

position:135240:-1
position: 135240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814517.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,92124..92311,131574..131663,133693..135238))
location: region:22142-135238:-1
so has part: feature:133693-135238:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:135238:-1
position: 135238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X31
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814528.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24217,92124..92311,131574..131663,133693..135237))
location: region:22142-135237:-1
so has part: feature:133693-135237:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:24119-24217:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:135237:-1
position: 135237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24119-24217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X32
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814529.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,24119..24214,58251..58388,92124..92311,131574..131663,133693..135235))
location: region:22142-135235:-1
so has part: feature:133693-135235:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22142-22357:-1:exon

position:135235:-1
position: 135235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814526.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,24119..24217,58251..58388,92124..92311,131574..131663,133693..135235))
location: region:22142-135235:-1
so has part: feature:133693-135235:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:24119-24217:-1:exon
so has part: feature:22142-22357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814523.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,47139..47209,92124..92311,131574..131663,133693..135234))
location: region:22142-135234:-1
so has part: feature:133693-135234:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:135234:-1
position: 135234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814521.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24217,47139..47209,92124..92311,131574..131663,133693..135234))
location: region:22142-135234:-1
so has part: feature:133693-135234:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24119-24217:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814502.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,47139..47209,92124..92311,131574..131663,133693..134791))
location: region:22142-134791:-1
so has part: feature:133693-134791:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

position:134791:-1
position: 134791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814542.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,24119..24214,92124..92311,131574..131663,133693..134789))
location: region:22142-134789:-1
so has part: feature:133693-134789:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22142-22357:-1:exon

position:134789:-1
position: 134789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X41
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814538.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,24119..24217,92124..92311,131574..131663,133693..134778))
location: region:22142-134778:-1
so has part: feature:133693-134778:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:24119-24217:-1:exon
so has part: feature:22142-22357:-1:exon

position:134778:-1
position: 134778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24119-24217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X48
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814545.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,47139..47209,111589..111643,112694..112913))
location: region:22142-112913:-1
so has part: feature:112694-112913:-1:exon
so has part: feature:111589-111643:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112694-112913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111589-111643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X49
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814546.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(22142..22357,22476..22577,24119..24214,24294..24480,47139..47209,58320..58388,111589..111643,112694..112913))
location: region:22142-112913:-1
so has part: feature:112694-112913:-1:exon
so has part: feature:111589-111643:-1:exon
so has part: feature:58320-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:24294-24480:-1:exon
so has part: feature:24119-24214:-1:exon
so has part: feature:22476-22577:-1:exon
so has part: feature:22142-22357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112694-112913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111589-111643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58320-58388:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24294-24480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24119-24214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22476-22577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22142-22357:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X30
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005814527.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(24488..25456,25835..25990,47139..47209,58251..58388,92124..92311,131574..131663,133693..135255))
location: region:24488-135255:-1
so has part: feature:133693-135255:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:25835-25990:-1:exon
so has part: feature:24488-25456:-1:exon

position:24488:-1
position: 24488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25835-25990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24488-25456:-1:exon

position:25456:-1
position: 25456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X44
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814541.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(26587..27634,47139..47209,58320..58388,92124..92311,131574..131663,133693..135235))
location: region:26587-135235:-1
so has part: feature:133693-135235:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58320-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:26587-27634:-1:exon

position:26587:-1
position: 26587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58320-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26587-27634:-1:exon

position:27634:-1
position: 27634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814522.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(26587..27634,47139..47209,58251..58388,92124..92311,131574..131663,133693..134791))
location: region:26587-134791:-1
so has part: feature:133693-134791:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:26587-27634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26587-27634:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814536.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(26587..27634,58251..58388,92124..92311,131574..131663,133693..134778))
location: region:26587-134778:-1
so has part: feature:133693-134778:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:26587-27634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26587-27634:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X47
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814544.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(26587..27634,92124..92311,131574..131663,133693..134759))
location: region:26587-134759:-1
so has part: feature:133693-134759:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:26587-27634:-1:exon

position:134759:-1
position: 134759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26587-27634:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005814535.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(26587..27634,47139..47209,92124..92311,131574..131663,133693..134755))
location: region:26587-134755:-1
so has part: feature:133693-134755:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:26587-27634:-1:exon

position:134755:-1
position: 134755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26587-27634:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814532.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(39808..39827,47139..47209,58251..58388,92124..92311,131574..131663,133693..135233))
location: region:39808-135233:-1
so has part: feature:133693-135233:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:39808-39827:-1:exon

position:39808:-1
position: 39808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135233:-1
position: 135233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39808-39827:-1:exon

position:39827:-1
position: 39827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X42
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005814539.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(44435..45016,47139..47209,131574..131663,133693..135244))
location: region:44435-135244:-1
so has part: feature:133693-135244:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:44435-45016:-1:exon

position:44435:-1
position: 44435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135244:-1
position: 135244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44435-45016:-1:exon

position:45016:-1
position: 45016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005814530.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(44435..45016,47139..47209,58320..58388,92124..92311,131574..131663,133693..134779))
location: region:44435-134779:-1
so has part: feature:133693-134779:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58320-58388:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:44435-45016:-1:exon

position:134779:-1
position: 134779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58320-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44435-45016:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005814501.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(44435..45016,47139..47209,92124..92311,131574..131663,133693..134736))
location: region:44435-134736:-1
so has part: feature:133693-134736:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:47139-47209:-1:exon
so has part: feature:44435-45016:-1:exon

position:134736:-1
position: 134736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47139-47209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44435-45016:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X36
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814533.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(56687..57646,58251..58388,92124..92311,131574..131663,133693..134775))
location: region:56687-134775:-1
so has part: feature:133693-134775:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:58251-58388:-1:exon
so has part: feature:56687-57646:-1:exon

position:56687:-1
position: 56687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134775:-1
position: 134775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58251-58388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56687-57646:-1:exon

position:57646:-1
position: 57646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NGF
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 69425..104806
location: region:69425-104806:1
so has part: feature:69425-104806:1:exon
subclass of: SO_0000010

121059349
type: Gene
SIO_000068: ncbigene

position:69425:1
position: 69425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104806:1
position: 104806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69425-104806:1:exon

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NGF
product: nerve growth factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040536113.1
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(69425..71954,100589..100728,103182..103370,103991..104806)
location: region:69425-104806:1
so has part: feature:69425-71954:1:exon
so has part: feature:100589-100728:1:exon
so has part: feature:103182-103370:1:exon
so has part: feature:103991-104806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69425-71954:1:exon

position:71954:1
position: 71954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100589-100728:1:exon

position:100589:1
position: 100589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100728:1
position: 100728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103182-103370:1:exon

position:103182:1
position: 103182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103370:1
position: 103370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103991-104806:1:exon

position:103991:1
position: 103991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NGF
product: nerve growth factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536110.1
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(70417..71954,100589..100728,103182..103370,103928..104806)
location: region:70417-104806:1
so has part: feature:70417-71954:1:exon
so has part: feature:100589-100728:1:exon
so has part: feature:103182-103370:1:exon
so has part: feature:103928-104806:1:exon

position:70417:1
position: 70417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70417-71954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100589-100728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103182-103370:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103928-104806:1:exon

position:103928:1
position: 103928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NGF
product: nerve growth factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040536112.1
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(70419..71954,103928..104806)
location: region:70419-104806:1
so has part: feature:70419-71954:1:exon
so has part: feature:103928-104806:1:exon

position:70419:1
position: 70419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70419-71954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103928-104806:1:exon

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NGF
product: nerve growth factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536111.1
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(70420..71954,100589..100728,103928..104806)
location: region:70420-104806:1
so has part: feature:70420-71954:1:exon
so has part: feature:100589-100728:1:exon
so has part: feature:103928-104806:1:exon

position:70420:1
position: 70420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70420-71954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100589-100728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103928-104806:1:exon

LOC121059351
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75416..85249)
location: region:75416-85249:-1
so has part: feature:75416-85249:-1:exon
subclass of: SO_0000011

121059351
type: Gene
SIO_000068: ncbigene

position:75416:-1
position: 75416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85249:-1
position: 85249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75416-85249:-1:exon

LOC121059351
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059351
product: uncharacterized LOC121059351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814548.1
SIO_010081: LOC121059351
subclass of: SO_0000673
so part of: LOC121059351
location: complement(join(75416..83343,84839..85249))
location: region:75416-85249:-1
so has part: feature:84839-85249:-1:exon
so has part: feature:75416-83343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84839-85249:-1:exon

position:84839:-1
position: 84839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75416-83343:-1:exon

position:83343:-1
position: 83343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X50
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814547.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(85342..85979,92124..92311,131574..131663,133693..134763))
location: region:85342-134763:-1
so has part: feature:133693-134763:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:92124-92311:-1:exon
so has part: feature:85342-85979:-1:exon

position:85342:-1
position: 85342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134763:-1
position: 134763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92124-92311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85342-85979:-1:exon

position:85979:-1
position: 85979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor isoform X1
translation: MSTWQVHSVMSMLYYTLIIAFFIGTQAAPKSEDNAPLEYPAEHSLPKSHQSNGHHISKAAPQTTHSHSTWTIGRREGINITMDPNLFKKKRFRSPRVLFSTRPPPVSGQGQNMGQLSSAVSLNRTARTKRTAHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNIFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(103356..103370,103928..104659)
location: region:103356-104659:1
so has part: feature:103356-103370:1:exon
so has part: feature:103928-104659:1:exon

XP_040392044.1
type: Protein
SIO_000068: ncbiprotein

position:103356:1
position: 103356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104659:1
position: 104659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103356-103370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103928-104659:1:exon

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor isoform X3
translation: MSTWQAAPKSEDNAPLEYPAEHSLPKSHQSNGHHISKAAPQTTHSHSTWTIGRREGINITMDPNLFKKKRFRSPRVLFSTRPPPVSGQGQNMGQLSSAVSLNRTARTKRTAHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNIFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(103356..103370,103991..104659)
location: region:103356-104659:1
so has part: feature:103356-103370:1:exon
so has part: feature:103991-104659:1:exon

XP_040392047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103356-103370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103991-104659:1:exon

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor isoform X2
translation: MSMLYYTLIIAFFIGTQAAPKSEDNAPLEYPAEHSLPKSHQSNGHHISKAAPQTTHSHSTWTIGRREGINITMDPNLFKKKRFRSPRVLFSTRPPPVSGQGQNMGQLSSAVSLNRTARTKRTAHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNIFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: 103940..104659
location: region:103940-104659:1
so has part: feature:103940-104659:1:exon

XP_040392045.1
type: Protein
SIO_000068: ncbiprotein

position:103940:1
position: 103940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103940-104659:1:exon

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor isoform X2
translation: MSMLYYTLIIAFFIGTQAAPKSEDNAPLEYPAEHSLPKSHQSNGHHISKAAPQTTHSHSTWTIGRREGINITMDPNLFKKKRFRSPRVLFSTRPPPVSGQGQNMGQLSSAVSLNRTARTKRTAHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNINNNIFKQYFFETKCRDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: 103940..104659
location: region:103940-104659:1
so has part: feature:103940-104659:1:exon

XP_040392046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103940-104659:1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X43
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814540.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(113581..113679,131574..131663,162290..162422))
location: region:113581-162422:-1
so has part: feature:162290-162422:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:113581-113679:-1:exon

position:113581:-1
position: 113581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162422:-1
position: 162422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162290-162422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113581-113679:-1:exon

position:113679:-1
position: 113679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814543.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(113581..113679,114100..114179,131574..131663,162290..162422))
location: region:113581-162422:-1
so has part: feature:162290-162422:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:114100-114179:-1:exon
so has part: feature:113581-113679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162290-162422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114100-114179:-1:exon

position:114100:-1
position: 114100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114179:-1
position: 114179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:113581-113679:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X37
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814534.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(113581..113679,114100..114179,131574..131663,133693..135239))
location: region:113581-135239:-1
so has part: feature:133693-135239:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:114100-114179:-1:exon
so has part: feature:113581-113679:-1:exon

position:135239:-1
position: 135239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-135239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114100-114179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113581-113679:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814505.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(113581..113679,131574..131663,133693..134686))
location: region:113581-134686:-1
so has part: feature:133693-134686:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:113581-113679:-1:exon

position:134686:-1
position: 134686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113581-113679:-1:exon

LOC121059350
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121059350
product: uncharacterized LOC121059350, transcript variant X28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005814525.1
SIO_010081: LOC121059350
so part of: LOC121059350
location: complement(join(118985..119158,131574..131663,133693..134791))
location: region:118985-134791:-1
so has part: feature:133693-134791:-1:exon
so has part: feature:131574-131663:-1:exon
so has part: feature:118985-119158:-1:exon

position:118985:-1
position: 118985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133693-134791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131574-131663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118985-119158:-1:exon

position:119158:-1
position: 119158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPAN2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 137390..162617
location: region:137390-162617:1
so has part: feature:137390-162617:1:exon
subclass of: SO_0000010

121059348
type: Gene
SIO_000068: ncbigene

position:137390:1
position: 137390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162617:1
position: 162617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137390-162617:1:exon

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSPAN2
product: tetraspanin 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040536109.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137390..137541,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,161276..162617)
location: region:137390-162617:1
so has part: feature:137390-137541:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:161276-162617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137390-137541:1:exon

position:137541:1
position: 137541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140792-140894:1:exon

position:140792:1
position: 140792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140894:1
position: 140894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153220-153317:1:exon

position:153220:1
position: 153220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153317:1
position: 153317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153764-153838:1:exon

position:153764:1
position: 153764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153838:1
position: 153838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:154384-154482:1:exon

position:154384:1
position: 154384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154482:1
position: 154482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:155649-155723:1:exon

position:155649:1
position: 155649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155723:1
position: 155723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:156481-156564:1:exon

position:156481:1
position: 156481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156564:1
position: 156564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:161276-162617:1:exon

position:161276:1
position: 161276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSPAN2
product: tetraspanin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 131 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536108.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137390..137541,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,158254..158498)
location: region:137390-158498:1
so has part: feature:137390-137541:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:158254-158498:1:exon

position:158498:1
position: 158498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137390-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158254-158498:1:exon

position:158254:1
position: 158254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSPAN2
product: tetraspanin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536106.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137390..137541,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,156646..156913)
location: region:137390-156913:1
so has part: feature:137390-137541:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:156646-156913:1:exon

position:156913:1
position: 156913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137390-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156646-156913:1:exon

position:156646:1
position: 156646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSPAN2
product: tetraspanin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536105.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137403..137541,139417..139521,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,161276..162617)
location: region:137403-162617:1
so has part: feature:137403-137541:1:exon
so has part: feature:139417-139521:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:161276-162617:1:exon

position:137403:1
position: 137403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137403-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139417-139521:1:exon

position:139417:1
position: 139417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139521:1
position: 139521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161276-162617:1:exon

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSPAN2
product: tetraspanin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536103.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137403..137541,139417..139521,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,156646..156913)
location: region:137403-156913:1
so has part: feature:137403-137541:1:exon
so has part: feature:139417-139521:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:156646-156913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137403-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139417-139521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156646-156913:1:exon

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSPAN2
product: tetraspanin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536104.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137406..137541,139417..139521,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,158254..158498)
location: region:137406-158498:1
so has part: feature:137406-137541:1:exon
so has part: feature:139417-139521:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:158254-158498:1:exon

position:137406:1
position: 137406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137406-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139417-139521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158254-158498:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X3
translation: MGTAREEMRRVKVLLFVFNLSFWLHAVPFGPVAVTRGKRSAPAPLLSLVTWHHSVFSSLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITMH
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137473..137541,139417..139521,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,161276..161284)
location: region:137473-161284:1
so has part: feature:137473-137541:1:exon
so has part: feature:139417-139521:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:161276-161284:1:exon

XP_040392039.1
type: Protein
SIO_000068: ncbiprotein

position:137473:1
position: 137473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161284:1
position: 161284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137473-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139417-139521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161276-161284:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X6
translation: MGTAREEMRRVKVLLFVFNLSFWLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITMH
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137473..137541,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,161276..161284)
location: region:137473-161284:1
so has part: feature:137473-137541:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:161276-161284:1:exon

XP_040392043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137473-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:161276-161284:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X2
translation: MGTAREEMRRVKVLLFVFNLSFWLHAVPFGPVAVTRGKRSAPAPLLSLVTWHHSVFSSLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITIFGMIFSMVLCCAIRNTREMI
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137473..137541,139417..139521,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,158254..158319)
location: region:137473-158319:1
so has part: feature:137473-137541:1:exon
so has part: feature:139417-139521:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:158254-158319:1:exon

XP_040392038.1
type: Protein
SIO_000068: ncbiprotein

position:158319:1
position: 158319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137473-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139417-139521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158254-158319:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X5
translation: MGTAREEMRRVKVLLFVFNLSFWLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITIFGMIFSMVLCCAIRNTREMI
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137473..137541,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,158254..158319)
location: region:137473-158319:1
so has part: feature:137473-137541:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:158254-158319:1:exon

XP_040392042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137473-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158254-158319:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X1
translation: MGTAREEMRRVKVLLFVFNLSFWLHAVPFGPVAVTRGKRSAPAPLLSLVTWHHSVFSSLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITLLVRFLSVSCEMAFQENAVCSIGSM
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137473..137541,139417..139521,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,156646..156723)
location: region:137473-156723:1
so has part: feature:137473-137541:1:exon
so has part: feature:139417-139521:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:156646-156723:1:exon

XP_040392037.1
type: Protein
SIO_000068: ncbiprotein

position:156723:1
position: 156723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137473-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139417-139521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156646-156723:1:exon

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2 isoform X4
translation: MGTAREEMRRVKVLLFVFNLSFWLAGLAVIAFGLWLRFGGVMAEFASDKKPPEYFFIGLYVLVGAGALMTMVGFFGCCGAARESQFLLGAFFACLLVIFAAEVTAGVFAFIGKKVAIQEVQKIYEDIYDEYMKNPGKVNRTIYHYHLALQCCGKDNTEQQMGLPCPENIQMPKNCLVEIQNVLDANLHLVGIVGIAIAGITLLVRFLSVSCEMAFQENAVCSIGSM
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(137473..137541,140792..140894,153220..153317,153764..153838,154384..154482,155649..155723,156481..156564,156646..156723)
location: region:137473-156723:1
so has part: feature:137473-137541:1:exon
so has part: feature:140792-140894:1:exon
so has part: feature:153220-153317:1:exon
so has part: feature:153764-153838:1:exon
so has part: feature:154384-154482:1:exon
so has part: feature:155649-155723:1:exon
so has part: feature:156481-156564:1:exon
so has part: feature:156646-156723:1:exon

XP_040392040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137473-137541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140792-140894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153220-153317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153764-153838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154384-154482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155649-155723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156481-156564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156646-156723:1:exon

LOC121059210
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 163784..174603
location: region:163784-174603:1
so has part: feature:163784-174603:1:exon
subclass of: SO_0000011

121059210
type: Gene
SIO_000068: ncbigene

position:163784:1
position: 163784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174603:1
position: 174603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163784-174603:1:exon

LOC121059210
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059210
product: uncharacterized LOC121059210
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814461.1
SIO_010081: LOC121059210
subclass of: SO_0000673
so part of: LOC121059210
location: join(163784..163832,164677..164818,174379..174603)
location: region:163784-174603:1
so has part: feature:163784-163832:1:exon
so has part: feature:164677-164818:1:exon
so has part: feature:174379-174603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163784-163832:1:exon

position:163832:1
position: 163832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164677-164818:1:exon

position:164677:1
position: 164677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164818:1
position: 164818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174379-174603:1:exon

position:174379:1
position: 174379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSHB
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(165405..168845)
location: region:165405-168845:-1
so has part: feature:165405-168845:-1:exon
subclass of: SO_0000010

121059209
type: Gene
SIO_000068: ncbigene

position:165405:-1
position: 165405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168845:-1
position: 168845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165405-168845:-1:exon

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSHB
product: thyroid stimulating hormone subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535724.1
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(165405..165803,166685..166838,167631..167793,168282..168335))
location: region:165405-168335:-1
so has part: feature:168282-168335:-1:exon
so has part: feature:167631-167793:-1:exon
so has part: feature:166685-166838:-1:exon
so has part: feature:165405-165803:-1:exon

position:168335:-1
position: 168335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168282-168335:-1:exon

position:168282:-1
position: 168282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167631-167793:-1:exon

position:167631:-1
position: 167631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167793:-1
position: 167793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166685-166838:-1:exon

position:166685:-1
position: 166685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166838:-1
position: 166838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:165405-165803:-1:exon

position:165803:-1
position: 165803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSHB
product: thyroid stimulating hormone subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040535723.1
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(165407..165803,166685..166838,167631..167793,168665..168845))
location: region:165407-168845:-1
so has part: feature:168665-168845:-1:exon
so has part: feature:167631-167793:-1:exon
so has part: feature:166685-166838:-1:exon
so has part: feature:165407-165803:-1:exon

position:165407:-1
position: 165407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168665-168845:-1:exon

position:168665:-1
position: 168665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167631-167793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166685-166838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165407-165803:-1:exon

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSHB
product: thyroid stimulating hormone subunit beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535726.1
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(165408..165673,165739..165803,166685..166838,167631..167793,168665..168844))
location: region:165408-168844:-1
so has part: feature:168665-168844:-1:exon
so has part: feature:167631-167793:-1:exon
so has part: feature:166685-166838:-1:exon
so has part: feature:165739-165803:-1:exon
so has part: feature:165408-165673:-1:exon

position:165408:-1
position: 165408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168844:-1
position: 168844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168665-168844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167631-167793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166685-166838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165739-165803:-1:exon

position:165739:-1
position: 165739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:165408-165673:-1:exon

position:165673:-1
position: 165673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta isoform X3
translation: MNPFFVMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAISCKCGQPSPSEFQSDLSAIIFAEHAQL
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(165668..165673,165739..165803,166685..166838,167631..167792))
location: region:165668-167792:-1
so has part: feature:167631-167792:-1:exon
so has part: feature:166685-166838:-1:exon
so has part: feature:165739-165803:-1:exon
so has part: feature:165668-165673:-1:exon

XP_040391660.1
type: Protein
SIO_000068: ncbiprotein

position:165668:-1
position: 165668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167792:-1
position: 167792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167631-167792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166685-166838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165739-165803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165668-165673:-1:exon

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta isoform X1
translation: MNPFFVMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAISCKCGQPSPSEFQSDLSAIIFAEHAQVRSADPGIWK
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(165706..165803,166685..166838,167631..167792))
location: region:165706-167792:-1
so has part: feature:167631-167792:-1:exon
so has part: feature:166685-166838:-1:exon
so has part: feature:165706-165803:-1:exon

XP_040391657.1
type: Protein
SIO_000068: ncbiprotein

position:165706:-1
position: 165706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167631-167792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166685-166838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165706-165803:-1:exon

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta isoform X1
translation: MNPFFVMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAISCKCGQPSPSEFQSDLSAIIFAEHAQVRSADPGIWK
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(165706..165803,166685..166838,167631..167792))
location: region:165706-167792:-1
so has part: feature:167631-167792:-1:exon
so has part: feature:166685-166838:-1:exon
so has part: feature:165706-165803:-1:exon

XP_040391658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167631-167792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166685-166838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165706-165803:-1:exon

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TSHB
product: thyroid stimulating hormone subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535725.1
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(166512..166838,167631..167793,168665..168834))
location: region:166512-168834:-1
so has part: feature:168665-168834:-1:exon
so has part: feature:167631-167793:-1:exon
so has part: feature:166512-166838:-1:exon

position:166512:-1
position: 166512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168834:-1
position: 168834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168665-168834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167631-167793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166512-166838:-1:exon

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta isoform X2
translation: MNPFFVMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLAINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVAISCKCGKCNTDYSDCVHEKVRPNYCTKPQKLCNM
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(166596..166838,167631..167792))
location: region:166596-167792:-1
so has part: feature:167631-167792:-1:exon
so has part: feature:166596-166838:-1:exon

XP_040391659.1
type: Protein
SIO_000068: ncbiprotein

position:166596:-1
position: 166596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167631-167792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166596-166838:-1:exon

SYCP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(175636..204646)
location: region:175636-204646:-1
so has part: feature:175636-204646:-1:exon
subclass of: SO_0000010

121059207
type: Gene
SIO_000068: ncbigene

position:175636:-1
position: 175636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204646:-1
position: 204646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175636-204646:-1:exon

SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYCP1
product: synaptonemal complex protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535720.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(175636..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,203445..203529,204519..204646))
location: region:175636-204646:-1
so has part: feature:204519-204646:-1:exon
so has part: feature:203445-203529:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
so has part: feature:188761-188878:-1:exon
so has part: feature:188466-188536:-1:exon
so has part: feature:187693-187783:-1:exon
so has part: feature:186950-187012:-1:exon
so has part: feature:186566-186628:-1:exon
so has part: feature:185636-185698:-1:exon
so has part: feature:184318-184434:-1:exon
so has part: feature:183570-183680:-1:exon
so has part: feature:182706-182798:-1:exon
so has part: feature:181713-181787:-1:exon
so has part: feature:179222-179398:-1:exon
so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:175636-178084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204519-204646:-1:exon

position:204519:-1
position: 204519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203445-203529:-1:exon

position:203445:-1
position: 203445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203529:-1
position: 203529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:200852-200919:-1:exon

position:200852:-1
position: 200852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200919:-1
position: 200919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:200595-200668:-1:exon

position:200595:-1
position: 200595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200668:-1
position: 200668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:199237-199295:-1:exon

position:199237:-1
position: 199237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199295:-1
position: 199295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:198062-198131:-1:exon

position:198062:-1
position: 198062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198131:-1
position: 198131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:196969-197042:-1:exon

position:196969:-1
position: 196969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197042:-1
position: 197042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:195867-195975:-1:exon

position:195867:-1
position: 195867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195975:-1
position: 195975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:194375-194469:-1:exon

position:194375:-1
position: 194375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194469:-1
position: 194469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:194058-194242:-1:exon

position:194058:-1
position: 194058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194242:-1
position: 194242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:192905-192972:-1:exon

position:192905:-1
position: 192905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192972:-1
position: 192972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:191674-191735:-1:exon

position:191674:-1
position: 191674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191735:-1
position: 191735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:190578-190682:-1:exon

position:190578:-1
position: 190578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190682:-1
position: 190682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:189484-189587:-1:exon

position:189484:-1
position: 189484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189587:-1
position: 189587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:188761-188878:-1:exon

position:188761:-1
position: 188761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188878:-1
position: 188878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:188466-188536:-1:exon

position:188466:-1
position: 188466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188536:-1
position: 188536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:187693-187783:-1:exon

position:187693:-1
position: 187693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187783:-1
position: 187783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:186950-187012:-1:exon

position:186950:-1
position: 186950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187012:-1
position: 187012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:186566-186628:-1:exon

position:186566:-1
position: 186566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186628:-1
position: 186628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:185636-185698:-1:exon

position:185636:-1
position: 185636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185698:-1
position: 185698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:184318-184434:-1:exon

position:184318:-1
position: 184318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184434:-1
position: 184434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:183570-183680:-1:exon

position:183570:-1
position: 183570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183680:-1
position: 183680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:182706-182798:-1:exon

position:182706:-1
position: 182706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182798:-1
position: 182798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:181713-181787:-1:exon

position:181713:-1
position: 181713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181787:-1
position: 181787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:179222-179398:-1:exon

position:179222:-1
position: 179222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179398:-1
position: 179398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:178616-178753:-1:exon

position:178616:-1
position: 178616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178753:-1
position: 178753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:178171-178257:-1:exon

position:178171:-1
position: 178171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178257:-1
position: 178257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:175636-178084:-1:exon

position:178084:-1
position: 178084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYCP1
product: synaptonemal complex protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535715.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
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SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYCP1
product: synaptonemal complex protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535714.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
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location: region:175636-204640:-1
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SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYCP1
product: synaptonemal complex protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535717.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(175636..178084,178171..178257,178616..178753,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,201760..201924,203244..203290,203445..203529,204519..204640))
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SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYCP1
product: synaptonemal complex protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535716.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
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location: region:175637-204640:-1
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position:175637:-1
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SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYCP1
product: synaptonemal complex protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535719.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(175637..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,204519..204626))
location: region:175637-204626:-1
so has part: feature:204519-204626:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
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so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
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so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
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so has part: feature:178171-178257:-1:exon
so has part: feature:175637-178084:-1:exon

position:204626:-1
position: 204626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 25
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urn:…
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urn:…
SIO_000300: 27
SIO_000628: feature:175637-178084:-1:exon

SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYCP1
product: synaptonemal complex protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535712.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(175882..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,201760..201924,203244..203290,203445..203529,204519..204640))
location: region:175882-204640:-1
so has part: feature:204519-204640:-1:exon
so has part: feature:203445-203529:-1:exon
so has part: feature:203244-203290:-1:exon
so has part: feature:201760-201924:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
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so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
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so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:175882-178084:-1:exon

position:175882:-1
position: 175882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
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urn:…
SIO_000300: 30
SIO_000628: feature:175882-178084:-1:exon

SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYCP1
product: synaptonemal complex protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535713.1
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(175885..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187702..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,201760..201924,203244..203290,203445..203529,204519..204640))
location: region:175885-204640:-1
so has part: feature:204519-204640:-1:exon
so has part: feature:203445-203529:-1:exon
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so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:175885-178084:-1:exon

position:175885:-1
position: 175885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000628: feature:195867-195975:-1:exon

urn:…
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SIO_000628: feature:188466-188536:-1:exon

urn:…
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SIO_000628: feature:187702-187783:-1:exon

position:187702:-1
position: 187702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 29
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urn:…
SIO_000300: 30
SIO_000628: feature:175885-178084:-1:exon

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1 isoform X7
translation: MEKGKPFKLFVPPRLSGGQVSAVKPQTSSRAAGLCQFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIERMIVAFEELRVQAENTRLEMCFKLKEEAERVDKFEKECKLEVSMKEKQISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESQLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETEALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTVELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHVREKEMHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENVCHTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSIYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKHEYDKMVEEKDTELKLCKIKEQEQLSLKRTLESELSCLKSELSSLKEQLKVEIEEKKTQTHFTETPKPHLDLDCTSINVKKILSQNIPVKVNMTESKKTSPPAPAKSPLGSRLLKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(177941..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,204519..204626))
location: region:177941-204626:-1
so has part: feature:204519-204626:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
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so has part: feature:194058-194242:-1:exon
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so has part: feature:177941-178084:-1:exon

XP_040391653.1
type: Protein
SIO_000068: ncbiprotein

position:177941:-1
position: 177941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204519-204626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200852-200919:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:198062-198131:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:182706-182798:-1:exon

urn:…
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:178171-178257:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:177941-178084:-1:exon

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1 isoform X5
translation: MEKGKPFKLFVPPRLSGGQVSAVKPQTSSRAAGLCQGFNKCPDDDFNSPFVMTNTLNHGEITDSDAISQQVKLCSEIDEEFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIERMIVAFEELRVQAENTRLEMCFKLKEEAERVDKFEKECKLEVSMKEKQISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESQLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETEALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTVELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHVREKEMHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENVCHTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSIYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKHEYDKMVEEKDTELKLCKIKEQEQLSLKRTLESELSCLKSELSSLKEQLKVEIEEKKTQTHFTETPKPHLDLDCTSINVKKILSQNIPVKVNMTESKKTSPPAPAKSPLGSRLLKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(177941..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,203244..203290,203445..203529,204519..204626))
location: region:177941-204626:-1
so has part: feature:204519-204626:-1:exon
so has part: feature:203445-203529:-1:exon
so has part: feature:203244-203290:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
so has part: feature:188761-188878:-1:exon
so has part: feature:188466-188536:-1:exon
so has part: feature:187693-187783:-1:exon
so has part: feature:186950-187012:-1:exon
so has part: feature:186566-186628:-1:exon
so has part: feature:185636-185698:-1:exon
so has part: feature:184318-184434:-1:exon
so has part: feature:183570-183680:-1:exon
so has part: feature:182706-182798:-1:exon
so has part: feature:181713-181787:-1:exon
so has part: feature:179222-179398:-1:exon
so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:177941-178084:-1:exon

XP_040391650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204519-204626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203445-203529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203244-203290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200852-200919:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200595-200668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199237-199295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198062-198131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196969-197042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195867-195975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194375-194469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194058-194242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192905-192972:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:191674-191735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:190578-190682:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:189484-189587:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:188761-188878:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188466-188536:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:187693-187783:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:186950-187012:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:186566-186628:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:185636-185698:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:184318-184434:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:183570-183680:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:182706-182798:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181713-181787:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:179222-179398:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:178616-178753:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:178171-178257:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:177941-178084:-1:exon

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1 isoform X4
translation: MEKGKPFKLFVPPRLSGGQVSAVKPQTSSRAAGLCQGFNKCPDDDFNSPFVMTNTLNHGEITDSDAISQQVKLCSEIDEENIETMNELYSKLYKEAEKIKRWKVTVESELKQKERKLQENRKIIEAQRKAIQELQFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIEISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESQLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETEALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTVELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHVREKEMHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENVCHTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSIYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKHEYDKMVEEKDTELKLCKIKEQEQLSLKRTLESELSCLKSELSSLKEQLKVEIEEKKTQTHFTETPKPHLDLDCTSINVKKILSQNIPVKVNMTESKKTSPPAPAKSPLGSRLLKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(177941..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,199237..199295,200595..200668,200852..200919,201760..201924,203244..203290,203445..203529,204519..204626))
location: region:177941-204626:-1
so has part: feature:204519-204626:-1:exon
so has part: feature:203445-203529:-1:exon
so has part: feature:203244-203290:-1:exon
so has part: feature:201760-201924:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
so has part: feature:188761-188878:-1:exon
so has part: feature:188466-188536:-1:exon
so has part: feature:187693-187783:-1:exon
so has part: feature:186950-187012:-1:exon
so has part: feature:186566-186628:-1:exon
so has part: feature:185636-185698:-1:exon
so has part: feature:184318-184434:-1:exon
so has part: feature:183570-183680:-1:exon
so has part: feature:182706-182798:-1:exon
so has part: feature:181713-181787:-1:exon
so has part: feature:179222-179398:-1:exon
so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:177941-178084:-1:exon

XP_040391649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204519-204626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203445-203529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203244-203290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201760-201924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200852-200919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200595-200668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199237-199295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195867-195975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194375-194469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194058-194242:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192905-192972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:191674-191735:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190578-190682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:189484-189587:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188761-188878:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:188466-188536:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:187693-187783:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:186950-187012:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:186566-186628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:185636-185698:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:184318-184434:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:183570-183680:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:182706-182798:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:181713-181787:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:179222-179398:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:178616-178753:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:178171-178257:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:177941-178084:-1:exon

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1 isoform X2
translation: MEKGKPFKLFVPPRLSGGQVSAVKPQTSSRAAGLCQGFNKCPDDDFNSPFVMTNTLNHGEITDSDAISQQVKLCSEIDEENIETMNELYSKLYKEAEKIKRWKVTVESELKQKERKLQENRKIIEAQRKAIQELQFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIERMIVAFEELRVQAENTRLEMCFKLKEEAERVDKFEKECKLEVSMKEKQISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESQLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETEALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTVELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHVREKEMHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSIYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKHEYDKMVEEKDTELKLCKIKEQEQLSLKRTLESELSCLKSELSSLKEQLKVEIEEKKTQTHFTETPKPHLDLDCTSINVKKILSQNIPVKVNMTESKKTSPPAPAKSPLGSRLLKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(177941..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187702..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,201760..201924,203244..203290,203445..203529,204519..204626))
location: region:177941-204626:-1
so has part: feature:204519-204626:-1:exon
so has part: feature:203445-203529:-1:exon
so has part: feature:203244-203290:-1:exon
so has part: feature:201760-201924:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
so has part: feature:188761-188878:-1:exon
so has part: feature:188466-188536:-1:exon
so has part: feature:187702-187783:-1:exon
so has part: feature:186950-187012:-1:exon
so has part: feature:186566-186628:-1:exon
so has part: feature:185636-185698:-1:exon
so has part: feature:184318-184434:-1:exon
so has part: feature:183570-183680:-1:exon
so has part: feature:182706-182798:-1:exon
so has part: feature:181713-181787:-1:exon
so has part: feature:179222-179398:-1:exon
so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:177941-178084:-1:exon

XP_040391647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204519-204626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203445-203529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203244-203290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201760-201924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200852-200919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200595-200668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199237-199295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198062-198131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196969-197042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195867-195975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194375-194469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194058-194242:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192905-192972:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:191674-191735:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190578-190682:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189484-189587:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188761-188878:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:188466-188536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:187702-187783:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:186950-187012:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:186566-186628:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:185636-185698:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:184318-184434:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:183570-183680:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:182706-182798:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:181713-181787:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:179222-179398:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:178616-178753:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:178171-178257:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:177941-178084:-1:exon

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1 isoform X3
translation: MEKGKPFKLFVPPRLSGGQVSAVKPQTSSRAAGLCQGFNKCPDDDFNSPFVMTNTLNHGEITDSDAISQQVKLCSEIDEENIETMNELYSKLYKEAEKIKRWKVTVESELKQKERKLQENRKIIEAQRKAIQELQFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIERMIVAFEELRVQAENTRLEMCFKLKEEAERVDKFEKECKLEVSMKEKQISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESQLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETEALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTVELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHVREKEMHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENVCHTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSIYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKESELSCLKSELSSLKEQLKVEIEEKKTQTHFTETPKPHLDLDCTSINVKKILSQNIPVKVNMTESKKTSPPAPAKSPLGSRLLKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(177941..178084,178171..178257,178616..178753,179222..179398,181713..181787,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,201760..201924,203244..203290,203445..203529,204519..204626))
location: region:177941-204626:-1
so has part: feature:204519-204626:-1:exon
so has part: feature:203445-203529:-1:exon
so has part: feature:203244-203290:-1:exon
so has part: feature:201760-201924:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
so has part: feature:188761-188878:-1:exon
so has part: feature:188466-188536:-1:exon
so has part: feature:187693-187783:-1:exon
so has part: feature:186950-187012:-1:exon
so has part: feature:186566-186628:-1:exon
so has part: feature:185636-185698:-1:exon
so has part: feature:184318-184434:-1:exon
so has part: feature:183570-183680:-1:exon
so has part: feature:181713-181787:-1:exon
so has part: feature:179222-179398:-1:exon
so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:177941-178084:-1:exon

XP_040391648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204519-204626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203445-203529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203244-203290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201760-201924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200852-200919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200595-200668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199237-199295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198062-198131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196969-197042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195867-195975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194375-194469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194058-194242:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192905-192972:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:191674-191735:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190578-190682:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189484-189587:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188761-188878:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:188466-188536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:187693-187783:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:186950-187012:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:186566-186628:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:185636-185698:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:184318-184434:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:183570-183680:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181713-181787:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:179222-179398:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:178616-178753:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:178171-178257:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:177941-178084:-1:exon

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1 isoform X6
translation: MEKGKPFKLFVPPRLSGGQVSAVKPQTSSRAAGLCQGFNKCPDDDFNSPFVMTNTLNHGEITDSDAISQQVKLCSEIDEENIETMNELYSKLYKEAEKIKRWKVTVESELKQKERKLQENRKIIEAQRKAIQELQFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIERMIVAFEELRVQAENTRLEMCFKLKEEAERVDKFEKECKLEVSMKEKQISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESQLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETEALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTVELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHVREKEMHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENVCHTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSIYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKHEYDKMVEEKDTELKLCKIKEQEQLSLKRTLESELSCLKSELSSLKEQLKVEIEEKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(177941..178084,178171..178257,178616..178753,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,201760..201924,203244..203290,203445..203529,204519..204626))
location: region:177941-204626:-1
so has part: feature:204519-204626:-1:exon
so has part: feature:203445-203529:-1:exon
so has part: feature:203244-203290:-1:exon
so has part: feature:201760-201924:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
so has part: feature:188761-188878:-1:exon
so has part: feature:188466-188536:-1:exon
so has part: feature:187693-187783:-1:exon
so has part: feature:186950-187012:-1:exon
so has part: feature:186566-186628:-1:exon
so has part: feature:185636-185698:-1:exon
so has part: feature:184318-184434:-1:exon
so has part: feature:183570-183680:-1:exon
so has part: feature:182706-182798:-1:exon
so has part: feature:181713-181787:-1:exon
so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:177941-178084:-1:exon

XP_040391651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204519-204626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203445-203529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203244-203290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201760-201924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200852-200919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200595-200668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199237-199295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198062-198131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196969-197042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195867-195975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194375-194469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194058-194242:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192905-192972:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:191674-191735:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190578-190682:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189484-189587:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188761-188878:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:188466-188536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:187693-187783:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:186950-187012:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:186566-186628:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:185636-185698:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:184318-184434:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:183570-183680:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:182706-182798:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:181713-181787:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:178616-178753:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:178171-178257:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:177941-178084:-1:exon

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1 isoform X1
translation: MEKGKPFKLFVPPRLSGGQVSAVKPQTSSRAAGLCQGFNKCPDDDFNSPFVMTNTLNHGEITDSDAISQQVKLCSEIDEENIETMNELYSKLYKEAEKIKRWKVTVESELKQKERKLQENRKIIEAQRKAIQELQFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIERMIVAFEELRVQAENTRLEMCFKLKEEAERVDKFEKECKLEVSMKEKQISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESQLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETEALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTVELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHVREKEMHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENVCHTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSIYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKHEYDKMVEEKDTELKLCKIKEQEQLSLKRTLESELSCLKSELSSLKEQLKVEIEEKKTQTHFTETPKPHLDLDCTSINVKKILSQNIPVKVNMTESKKTSPPAPAKSPLGSRLLKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(177941..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,201760..201924,203244..203290,203445..203529,204519..204626))
location: region:177941-204626:-1
so has part: feature:204519-204626:-1:exon
so has part: feature:203445-203529:-1:exon
so has part: feature:203244-203290:-1:exon
so has part: feature:201760-201924:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
so has part: feature:188761-188878:-1:exon
so has part: feature:188466-188536:-1:exon
so has part: feature:187693-187783:-1:exon
so has part: feature:186950-187012:-1:exon
so has part: feature:186566-186628:-1:exon
so has part: feature:185636-185698:-1:exon
so has part: feature:184318-184434:-1:exon
so has part: feature:183570-183680:-1:exon
so has part: feature:182706-182798:-1:exon
so has part: feature:181713-181787:-1:exon
so has part: feature:179222-179398:-1:exon
so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:177941-178084:-1:exon

XP_040391646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204519-204626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203445-203529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203244-203290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201760-201924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200852-200919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200595-200668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199237-199295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198062-198131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196969-197042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195867-195975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194375-194469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194058-194242:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192905-192972:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:191674-191735:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190578-190682:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189484-189587:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188761-188878:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:188466-188536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:187693-187783:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:186950-187012:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:186566-186628:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:185636-185698:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:184318-184434:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:183570-183680:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:182706-182798:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:181713-181787:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:179222-179398:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:178616-178753:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:178171-178257:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:177941-178084:-1:exon

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1 isoform X8
translation: MVKSLIQFENEKLSLKLEDEICENKDLLKENSTSRHLCNLLKETCTHFTEKSTKYEHEREETRQLHVELNNNIERMIVAFEELRVQAENTRLEMCFKLKEEAERVDKFEKECKLEVSMKEKQISVLTIQSGEKDDVIKDLKTQLQESKNKIADLEEAKRLEGEMLKESQLNQEYLRAELEEAKVSLQKTEATQKSLETELQTAVETLIQVTQEKEAQMEECKETEALHTSMIEEFETSTSNLKSLLQEEQNRLKKYEEESKLLTVELTNKSAELEEMTKLKCDKEMQLEQLSETLDKAEELLGKKKDLEATVENLQERGKEMENILHVREKEMHDLQIQLTSKVEKEQSYIERLTTLNADLEREALKNEQLTVHINTLLLEKEQMDQEKSNIAAELRKLQEIHEGDRKKEENTKQLVDNLEETNSQLRNELESLKEKMAKKGEEIKSKLDESEENVCHTKSIENEISRKERQLKILDNKLNNLKKQVENKTKYIEELQQENKVLKKKMTAESKKTSIYEGKVNKLQLEMENMKNQHKETVDMYKREIEAKRVTENKLLEEVEKMKLLADEATITQREMDIRCQHKITEMMALMEKHKHEYDKMVEEKDTELKLCKIKEQEQLSLKRTLESELSCLKSELSSLKEQLKVEIEEKKTQTHFTETPKPHLDLDCTSINVKKILSQNIPVKVNMTESKKTSPPAPAKSPLGSRLLKTYIVKTPPVHKMQSESTNLLSEQRKKQKVLLQLDAQSDSSEHSDLLSIVSEEEMFKKLYKDYPQASQLYAMTPKKKPTTSNLKAPGSALKLTTVRKMREAGWTAVSKMDRKRKIKEAEKLFT
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(177941..178084,178171..178257,178616..178753,179222..179398,181713..181787,182706..182798,183570..183680,184318..184434,185636..185698,186566..186628,186950..187012,187693..187783,188466..188536,188761..188878,189484..189587,190578..190682,191674..191735,192905..192972,194058..194242,194375..194469,195867..195975,196969..197042,198062..198131,199237..199295,200595..200668,200852..200919,203445..203465))
location: region:177941-203465:-1
so has part: feature:203445-203465:-1:exon
so has part: feature:200852-200919:-1:exon
so has part: feature:200595-200668:-1:exon
so has part: feature:199237-199295:-1:exon
so has part: feature:198062-198131:-1:exon
so has part: feature:196969-197042:-1:exon
so has part: feature:195867-195975:-1:exon
so has part: feature:194375-194469:-1:exon
so has part: feature:194058-194242:-1:exon
so has part: feature:192905-192972:-1:exon
so has part: feature:191674-191735:-1:exon
so has part: feature:190578-190682:-1:exon
so has part: feature:189484-189587:-1:exon
so has part: feature:188761-188878:-1:exon
so has part: feature:188466-188536:-1:exon
so has part: feature:187693-187783:-1:exon
so has part: feature:186950-187012:-1:exon
so has part: feature:186566-186628:-1:exon
so has part: feature:185636-185698:-1:exon
so has part: feature:184318-184434:-1:exon
so has part: feature:183570-183680:-1:exon
so has part: feature:182706-182798:-1:exon
so has part: feature:181713-181787:-1:exon
so has part: feature:179222-179398:-1:exon
so has part: feature:178616-178753:-1:exon
so has part: feature:178171-178257:-1:exon
so has part: feature:177941-178084:-1:exon

XP_040391654.1
type: Protein
SIO_000068: ncbiprotein

position:203465:-1
position: 203465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203445-203465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200852-200919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200595-200668:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:199237-199295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198062-198131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196969-197042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195867-195975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194375-194469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194058-194242:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192905-192972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191674-191735:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190578-190682:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:189484-189587:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188761-188878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188466-188536:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:187693-187783:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:186950-187012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:186566-186628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:185636-185698:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:184318-184434:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:183570-183680:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:182706-182798:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:181713-181787:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:179222-179398:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:178616-178753:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:178171-178257:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:177941-178084:-1:exon

LOC121059208
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(203847..216179)
location: region:203847-216179:-1
so has part: feature:203847-216179:-1:exon
subclass of: SO_0000010

121059208
type: Gene
SIO_000068: ncbigene

position:203847:-1
position: 203847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216179:-1
position: 216179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203847-216179:-1:exon

LOC121059208
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059208
product: bile acid receptor-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040535721.1
SIO_010081: LOC121059208
subclass of: SO_0000673
so part of: LOC121059208
location: complement(join(203847..205103,205211..205324,205722..205838,206351..206479,207624..207723,207821..207925,208023..208162,209028..209168,209733..210098,211380..211506,215987..216179))
location: region:203847-216179:-1
so has part: feature:215987-216179:-1:exon
so has part: feature:211380-211506:-1:exon
so has part: feature:209733-210098:-1:exon
so has part: feature:209028-209168:-1:exon
so has part: feature:208023-208162:-1:exon
so has part: feature:207821-207925:-1:exon
so has part: feature:207624-207723:-1:exon
so has part: feature:206351-206479:-1:exon
so has part: feature:205722-205838:-1:exon
so has part: feature:205211-205324:-1:exon
so has part: feature:203847-205103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215987-216179:-1:exon

position:215987:-1
position: 215987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211380-211506:-1:exon

position:211380:-1
position: 211380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211506:-1
position: 211506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209733-210098:-1:exon

position:209733:-1
position: 209733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210098:-1
position: 210098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209028-209168:-1:exon

position:209028:-1
position: 209028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209168:-1
position: 209168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208023-208162:-1:exon

position:208023:-1
position: 208023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208162:-1
position: 208162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:207821-207925:-1:exon

position:207821:-1
position: 207821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207925:-1
position: 207925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207624-207723:-1:exon

position:207624:-1
position: 207624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207723:-1
position: 207723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:206351-206479:-1:exon

position:206351:-1
position: 206351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206479:-1
position: 206479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:205722-205838:-1:exon

position:205722:-1
position: 205722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205838:-1
position: 205838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:205211-205324:-1:exon

position:205211:-1
position: 205211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205324:-1
position: 205324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:203847-205103:-1:exon

position:205103:-1
position: 205103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059208
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059208
product: bile acid receptor-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040535722.1
SIO_010081: LOC121059208
subclass of: SO_0000673
so part of: LOC121059208
location: complement(join(203847..205103,205211..205324,205722..205838,206351..206479,207624..207723,207821..207925,208023..208162,209028..209168,209733..210098,211380..211506,213049..213151,215987..216179))
location: region:203847-216179:-1
so has part: feature:215987-216179:-1:exon
so has part: feature:213049-213151:-1:exon
so has part: feature:211380-211506:-1:exon
so has part: feature:209733-210098:-1:exon
so has part: feature:209028-209168:-1:exon
so has part: feature:208023-208162:-1:exon
so has part: feature:207821-207925:-1:exon
so has part: feature:207624-207723:-1:exon
so has part: feature:206351-206479:-1:exon
so has part: feature:205722-205838:-1:exon
so has part: feature:205211-205324:-1:exon
so has part: feature:203847-205103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215987-216179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213049-213151:-1:exon

position:213049:-1
position: 213049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213151:-1
position: 213151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:211380-211506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209733-210098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209028-209168:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:208023-208162:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207821-207925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207624-207723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:206351-206479:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205722-205838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205211-205324:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:203847-205103:-1:exon

LOC121059208
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor-like
translation: MANTFVTVPDGYCLAEPIQYYDVLPEHINYQLQDTDFQTAPYCQYSAVQIPSPVLQSQPSQSQYSTYTLDSQYNDGQYIISNCELSKPPFMASHLDDSGYQGLKRPRLNHSSLRLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDERLNSKHVSSTTRSGKIPEKMELTPGEHQLLDHIVAAHQKYMIPLEEAKKFLQETASPEESFLRLSETAVVHVQVLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLRSAQIYNQRISECQSSTSESHIRLPDHATCCHVQNLDKNIYSIEISHNEESPTSTTTTGITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIHHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEVWDLQ
SIO_010081: LOC121059208
subclass of: SO_0000673
so part of: LOC121059208
location: complement(join(204865..205103,205211..205324,205722..205838,206351..206479,207624..207723,207821..207925,208023..208162,209028..209168,209733..210098,211380..211443))
location: region:204865-211443:-1
so has part: feature:211380-211443:-1:exon
so has part: feature:209733-210098:-1:exon
so has part: feature:209028-209168:-1:exon
so has part: feature:208023-208162:-1:exon
so has part: feature:207821-207925:-1:exon
so has part: feature:207624-207723:-1:exon
so has part: feature:206351-206479:-1:exon
so has part: feature:205722-205838:-1:exon
so has part: feature:205211-205324:-1:exon
so has part: feature:204865-205103:-1:exon

XP_040391655.1
type: Protein
SIO_000068: ncbiprotein

position:204865:-1
position: 204865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211443:-1
position: 211443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211380-211443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209733-210098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209028-209168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208023-208162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207821-207925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207624-207723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206351-206479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205722-205838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:205211-205324:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204865-205103:-1:exon

LOC121059208
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor-like
translation: MANTFVTVPDGYCLAEPIQYYDVLPEHINYQLQDTDFQTAPYCQYSAVQIPSPVLQSQPSQSQYSTYTLDSQYNDGQYIISNCELSKPPFMASHLDDSGYQGLKRPRLNHSSLRLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDERLNSKHVSSTTRSGKIPEKMELTPGEHQLLDHIVAAHQKYMIPLEEAKKFLQETASPEESFLRLSETAVVHVQVLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLRSAQIYNQRISECQSSTSESHIRLPDHATCCHVQNLDKNIYSIEISHNEESPTSTTTTGITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIHHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEVWDLQ
SIO_010081: LOC121059208
subclass of: SO_0000673
so part of: LOC121059208
location: complement(join(204865..205103,205211..205324,205722..205838,206351..206479,207624..207723,207821..207925,208023..208162,209028..209168,209733..210098,211380..211443))
location: region:204865-211443:-1
so has part: feature:211380-211443:-1:exon
so has part: feature:209733-210098:-1:exon
so has part: feature:209028-209168:-1:exon
so has part: feature:208023-208162:-1:exon
so has part: feature:207821-207925:-1:exon
so has part: feature:207624-207723:-1:exon
so has part: feature:206351-206479:-1:exon
so has part: feature:205722-205838:-1:exon
so has part: feature:205211-205324:-1:exon
so has part: feature:204865-205103:-1:exon

XP_040391656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211380-211443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209733-210098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209028-209168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208023-208162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207821-207925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207624-207723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206351-206479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205722-205838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:205211-205324:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204865-205103:-1:exon

SIKE1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 225258..229674
location: region:225258-229674:1
so has part: feature:225258-229674:1:exon
subclass of: SO_0000010

121059312
type: Gene
SIO_000068: ncbigene

position:225258:1
position: 225258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229674:1
position: 229674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225258-229674:1:exon

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536049.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(225258..225686,225959..226101,227762..227875,228217..229674)
location: region:225258-229674:1
so has part: feature:225258-225686:1:exon
so has part: feature:225959-226101:1:exon
so has part: feature:227762-227875:1:exon
so has part: feature:228217-229674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225258-225686:1:exon

position:225686:1
position: 225686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225959-226101:1:exon

position:225959:1
position: 225959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226101:1
position: 226101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227762-227875:1:exon

position:227762:1
position: 227762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227875:1
position: 227875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228217-229674:1:exon

position:228217:1
position: 228217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536047.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(225266..225686,225959..226101,227762..227875,228237..229674)
location: region:225266-229674:1
so has part: feature:225266-225686:1:exon
so has part: feature:225959-226101:1:exon
so has part: feature:227762-227875:1:exon
so has part: feature:228237-229674:1:exon

position:225266:1
position: 225266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225266-225686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225959-226101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227762-227875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228237-229674:1:exon

position:228237:1
position: 228237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X1
translation: MTCTIEKILTDAKTLLERLKEHDTAAESLIDQSAVLHQRVAAMREAGAAPAEKVSAAGGAAGPTAAARPGRGAPADGADASRLRPHALLSQENTQIRDLRRENRALWISLEEHQDALELIMSKYRKQMLQLMQGRKGEDAEPVLKVHQANSVEIESQIDRICEMGEVMRKAIQVDDDQFFKVREKLAQLELENKELRELLSISKESFEVGREDLPDSEA
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(225374..225686,225959..226101,227762..227875,228237..228326)
location: region:225374-228326:1
so has part: feature:225374-225686:1:exon
so has part: feature:225959-226101:1:exon
so has part: feature:227762-227875:1:exon
so has part: feature:228237-228326:1:exon

XP_040391981.1
type: Protein
SIO_000068: ncbiprotein

position:225374:1
position: 225374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228326:1
position: 228326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225374-225686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225959-226101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227762-227875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228237-228326:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X2
translation: MTCTIEKILTDAKTLLERLKEHDTAAESLIDQSAVLHQRVAAMREAGAAPAEKVSAAGGAAGPTAAARPGRGAPADGADASRLRPHALLSQENTQIRDLRRENRALWISLEEHQDALELIMSKYRKQMLQLMQGRKGEDAEPVLKVHQANSVEIESQIDRICEMGEVMRKAIQVDDDQFFKVREKLAQLEQKY
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(225374..225686,225959..226101,227762..227875,228217..228228)
location: region:225374-228228:1
so has part: feature:225374-225686:1:exon
so has part: feature:225959-226101:1:exon
so has part: feature:227762-227875:1:exon
so has part: feature:228217-228228:1:exon

XP_040391983.1
type: Protein
SIO_000068: ncbiprotein

position:228228:1
position: 228228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225374-225686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225959-226101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227762-227875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228217-228228:1:exon

CSDE1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 230562..251728
location: region:230562-251728:1
so has part: feature:230562-251728:1:exon
subclass of: SO_0000010

121059310
type: Gene
SIO_000068: ncbigene

position:230562:1
position: 230562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251728:1
position: 251728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230562-251728:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CSDE1
product: cold shock domain containing E1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 178 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536046.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(230562..230714,234490..238816,239441..239550,240620..240717,240872..240953,241304..241432,241614..241739,242750..242962,243915..244055,244144..244302,244906..245013,245869..246044,246387..246499,247022..247141,247408..247586,248674..248837,249815..249947,250422..251728)
location: region:230562-251728:1
so has part: feature:230562-230714:1:exon
so has part: feature:234490-238816:1:exon
so has part: feature:239441-239550:1:exon
so has part: feature:240620-240717:1:exon
so has part: feature:240872-240953:1:exon
so has part: feature:241304-241432:1:exon
so has part: feature:241614-241739:1:exon
so has part: feature:242750-242962:1:exon
so has part: feature:243915-244055:1:exon
so has part: feature:244144-244302:1:exon
so has part: feature:244906-245013:1:exon
so has part: feature:245869-246044:1:exon
so has part: feature:246387-246499:1:exon
so has part: feature:247022-247141:1:exon
so has part: feature:247408-247586:1:exon
so has part: feature:248674-248837:1:exon
so has part: feature:249815-249947:1:exon
so has part: feature:250422-251728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230562-230714:1:exon

position:230714:1
position: 230714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234490-238816:1:exon

position:234490:1
position: 234490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238816:1
position: 238816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239441-239550:1:exon

position:239441:1
position: 239441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239550:1
position: 239550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240620-240717:1:exon

position:240620:1
position: 240620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240717:1
position: 240717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240872-240953:1:exon

position:240872:1
position: 240872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240953:1
position: 240953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:241304-241432:1:exon

position:241304:1
position: 241304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241432:1
position: 241432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:241614-241739:1:exon

position:241614:1
position: 241614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241739:1
position: 241739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242750-242962:1:exon

position:242750:1
position: 242750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242962:1
position: 242962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:243915-244055:1:exon

position:243915:1
position: 243915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244055:1
position: 244055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:244144-244302:1:exon

position:244144:1
position: 244144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244302:1
position: 244302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:244906-245013:1:exon

position:244906:1
position: 244906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245013:1
position: 245013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:245869-246044:1:exon

position:245869:1
position: 245869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246044:1
position: 246044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:246387-246499:1:exon

position:246387:1
position: 246387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246499:1
position: 246499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:247022-247141:1:exon

position:247022:1
position: 247022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247141:1
position: 247141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:247408-247586:1:exon

position:247408:1
position: 247408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247586:1
position: 247586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:248674-248837:1:exon

position:248674:1
position: 248674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248837:1
position: 248837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:249815-249947:1:exon

position:249815:1
position: 249815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249947:1
position: 249947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:250422-251728:1:exon

position:250422:1
position: 250422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CSDE1
product: cold shock domain containing E1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 206 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536044.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(230563..230714,234490..238816,239441..239550,239988..240080,240620..240717,240872..240953,241304..241432,241614..241739,242750..242962,243915..244055,244144..244302,244906..245013,245869..246044,246387..246499,247022..247141,247408..247586,248674..248837,249815..249947,250422..251728)
location: region:230563-251728:1
so has part: feature:230563-230714:1:exon
so has part: feature:234490-238816:1:exon
so has part: feature:239441-239550:1:exon
so has part: feature:239988-240080:1:exon
so has part: feature:240620-240717:1:exon
so has part: feature:240872-240953:1:exon
so has part: feature:241304-241432:1:exon
so has part: feature:241614-241739:1:exon
so has part: feature:242750-242962:1:exon
so has part: feature:243915-244055:1:exon
so has part: feature:244144-244302:1:exon
so has part: feature:244906-245013:1:exon
so has part: feature:245869-246044:1:exon
so has part: feature:246387-246499:1:exon
so has part: feature:247022-247141:1:exon
so has part: feature:247408-247586:1:exon
so has part: feature:248674-248837:1:exon
so has part: feature:249815-249947:1:exon
so has part: feature:250422-251728:1:exon

position:230563:1
position: 230563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230563-230714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234490-238816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239441-239550:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239988-240080:1:exon

position:239988:1
position: 239988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240080:1
position: 240080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240620-240717:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240872-240953:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241304-241432:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241614-241739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242750-242962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243915-244055:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244144-244302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244906-245013:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245869-246044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246387-246499:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247022-247141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:247408-247586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:248674-248837:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:249815-249947:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:250422-251728:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CSDE1
product: cold shock domain containing E1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3716 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536043.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(230563..230714,234490..234888,238618..238816,239441..239550,239988..240080,240620..240717,240872..240953,241304..241432,241614..241739,242750..242962,243915..244055,244144..244302,244906..245013,245869..246044,246387..246499,247022..247141,247408..247586,248674..248837,249815..249947,250422..251728)
location: region:230563-251728:1
so has part: feature:230563-230714:1:exon
so has part: feature:234490-234888:1:exon
so has part: feature:238618-238816:1:exon
so has part: feature:239441-239550:1:exon
so has part: feature:239988-240080:1:exon
so has part: feature:240620-240717:1:exon
so has part: feature:240872-240953:1:exon
so has part: feature:241304-241432:1:exon
so has part: feature:241614-241739:1:exon
so has part: feature:242750-242962:1:exon
so has part: feature:243915-244055:1:exon
so has part: feature:244144-244302:1:exon
so has part: feature:244906-245013:1:exon
so has part: feature:245869-246044:1:exon
so has part: feature:246387-246499:1:exon
so has part: feature:247022-247141:1:exon
so has part: feature:247408-247586:1:exon
so has part: feature:248674-248837:1:exon
so has part: feature:249815-249947:1:exon
so has part: feature:250422-251728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230563-230714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234490-234888:1:exon

position:234888:1
position: 234888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238618-238816:1:exon

position:238618:1
position: 238618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239441-239550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239988-240080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240620-240717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:240872-240953:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241304-241432:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:241614-241739:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242750-242962:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:243915-244055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244144-244302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244906-245013:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:245869-246044:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246387-246499:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:247022-247141:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:247408-247586:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:248674-248837:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:249815-249947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:250422-251728:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CSDE1
product: cold shock domain containing E1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 417 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536045.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(230563..230714,234490..234888,238618..238816,239441..239550,240620..240717,240872..240953,241304..241432,241614..241739,242750..242962,243915..244055,244144..244302,244906..245013,245869..246044,246387..246499,247022..247141,247408..247586,248674..248837,249815..249947,250422..251728)
location: region:230563-251728:1
so has part: feature:230563-230714:1:exon
so has part: feature:234490-234888:1:exon
so has part: feature:238618-238816:1:exon
so has part: feature:239441-239550:1:exon
so has part: feature:240620-240717:1:exon
so has part: feature:240872-240953:1:exon
so has part: feature:241304-241432:1:exon
so has part: feature:241614-241739:1:exon
so has part: feature:242750-242962:1:exon
so has part: feature:243915-244055:1:exon
so has part: feature:244144-244302:1:exon
so has part: feature:244906-245013:1:exon
so has part: feature:245869-246044:1:exon
so has part: feature:246387-246499:1:exon
so has part: feature:247022-247141:1:exon
so has part: feature:247408-247586:1:exon
so has part: feature:248674-248837:1:exon
so has part: feature:249815-249947:1:exon
so has part: feature:250422-251728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230563-230714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234490-234888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238618-238816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239441-239550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240620-240717:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240872-240953:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241304-241432:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241614-241739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242750-242962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243915-244055:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244144-244302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:244906-245013:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245869-246044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246387-246499:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247022-247141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:247408-247586:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:248674-248837:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:249815-249947:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:250422-251728:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X2
translation: MLVWRDVACWFFFFPAMFSFVQMSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(238552..238816,239441..239550,239988..240080,240620..240717,240872..240953,241304..241432,241614..241739,242750..242962,243915..244055,244144..244302,244906..245013,245869..246044,246387..246499,247022..247141,247408..247586,248674..248837,249815..249947,250422..250469)
location: region:238552-250469:1
so has part: feature:238552-238816:1:exon
so has part: feature:239441-239550:1:exon
so has part: feature:239988-240080:1:exon
so has part: feature:240620-240717:1:exon
so has part: feature:240872-240953:1:exon
so has part: feature:241304-241432:1:exon
so has part: feature:241614-241739:1:exon
so has part: feature:242750-242962:1:exon
so has part: feature:243915-244055:1:exon
so has part: feature:244144-244302:1:exon
so has part: feature:244906-245013:1:exon
so has part: feature:245869-246044:1:exon
so has part: feature:246387-246499:1:exon
so has part: feature:247022-247141:1:exon
so has part: feature:247408-247586:1:exon
so has part: feature:248674-248837:1:exon
so has part: feature:249815-249947:1:exon
so has part: feature:250422-250469:1:exon

XP_040391978.1
type: Protein
SIO_000068: ncbiprotein

position:238552:1
position: 238552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250469:1
position: 250469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238552-238816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239441-239550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239988-240080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240620-240717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240872-240953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241304-241432:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241614-241739:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242750-242962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243915-244055:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244144-244302:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244906-245013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245869-246044:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:246387-246499:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247022-247141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247408-247586:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:248674-248837:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:249815-249947:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:250422-250469:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X4
translation: MLVWRDVACWFFFFPAMFSFVQMSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(238552..238816,239441..239550,240620..240717,240872..240953,241304..241432,241614..241739,242750..242962,243915..244055,244144..244302,244906..245013,245869..246044,246387..246499,247022..247141,247408..247586,248674..248837,249815..249947,250422..250469)
location: region:238552-250469:1
so has part: feature:238552-238816:1:exon
so has part: feature:239441-239550:1:exon
so has part: feature:240620-240717:1:exon
so has part: feature:240872-240953:1:exon
so has part: feature:241304-241432:1:exon
so has part: feature:241614-241739:1:exon
so has part: feature:242750-242962:1:exon
so has part: feature:243915-244055:1:exon
so has part: feature:244144-244302:1:exon
so has part: feature:244906-245013:1:exon
so has part: feature:245869-246044:1:exon
so has part: feature:246387-246499:1:exon
so has part: feature:247022-247141:1:exon
so has part: feature:247408-247586:1:exon
so has part: feature:248674-248837:1:exon
so has part: feature:249815-249947:1:exon
so has part: feature:250422-250469:1:exon

XP_040391980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238552-238816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239441-239550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240620-240717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240872-240953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241304-241432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241614-241739:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:242750-242962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243915-244055:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244144-244302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244906-245013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245869-246044:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:246387-246499:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247022-247141:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247408-247586:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:248674-248837:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:249815-249947:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:250422-250469:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X1
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(238618..238816,239441..239550,239988..240080,240620..240717,240872..240953,241304..241432,241614..241739,242750..242962,243915..244055,244144..244302,244906..245013,245869..246044,246387..246499,247022..247141,247408..247586,248674..248837,249815..249947,250422..250469)
location: region:238618-250469:1
so has part: feature:238618-238816:1:exon
so has part: feature:239441-239550:1:exon
so has part: feature:239988-240080:1:exon
so has part: feature:240620-240717:1:exon
so has part: feature:240872-240953:1:exon
so has part: feature:241304-241432:1:exon
so has part: feature:241614-241739:1:exon
so has part: feature:242750-242962:1:exon
so has part: feature:243915-244055:1:exon
so has part: feature:244144-244302:1:exon
so has part: feature:244906-245013:1:exon
so has part: feature:245869-246044:1:exon
so has part: feature:246387-246499:1:exon
so has part: feature:247022-247141:1:exon
so has part: feature:247408-247586:1:exon
so has part: feature:248674-248837:1:exon
so has part: feature:249815-249947:1:exon
so has part: feature:250422-250469:1:exon

XP_040391977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238618-238816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239441-239550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239988-240080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240620-240717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240872-240953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241304-241432:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241614-241739:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242750-242962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243915-244055:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244144-244302:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244906-245013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245869-246044:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:246387-246499:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247022-247141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247408-247586:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:248674-248837:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:249815-249947:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:250422-250469:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X3
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAVKLVKIKPEILPEERINGQEVFYLTYTPEDVEGNIQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIDKEATPAKATSPNKGKEKEAEDGIIVYDDCGVKLTIPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEFYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(238618..238816,239441..239550,240620..240717,240872..240953,241304..241432,241614..241739,242750..242962,243915..244055,244144..244302,244906..245013,245869..246044,246387..246499,247022..247141,247408..247586,248674..248837,249815..249947,250422..250469)
location: region:238618-250469:1
so has part: feature:238618-238816:1:exon
so has part: feature:239441-239550:1:exon
so has part: feature:240620-240717:1:exon
so has part: feature:240872-240953:1:exon
so has part: feature:241304-241432:1:exon
so has part: feature:241614-241739:1:exon
so has part: feature:242750-242962:1:exon
so has part: feature:243915-244055:1:exon
so has part: feature:244144-244302:1:exon
so has part: feature:244906-245013:1:exon
so has part: feature:245869-246044:1:exon
so has part: feature:246387-246499:1:exon
so has part: feature:247022-247141:1:exon
so has part: feature:247408-247586:1:exon
so has part: feature:248674-248837:1:exon
so has part: feature:249815-249947:1:exon
so has part: feature:250422-250469:1:exon

XP_040391979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238618-238816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239441-239550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240620-240717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240872-240953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241304-241432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241614-241739:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:242750-242962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243915-244055:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244144-244302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244906-245013:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245869-246044:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:246387-246499:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247022-247141:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247408-247586:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:248674-248837:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:249815-249947:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:250422-250469:1:exon

NRAS
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NRAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 251901..256800
location: region:251901-256800:1
so has part: feature:251901-256800:1:exon
subclass of: SO_0000010

121059128
type: Gene
SIO_000068: ncbigene

position:251901:1
position: 251901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256800:1
position: 256800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251901-256800:1:exon

NRAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NRAS
product: NRAS proto-oncogene, GTPase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 long SRA reads, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535548.1
SIO_010081: NRAS
subclass of: SO_0000673
so part of: NRAS
location: join(251901..252104,253111..253289,253755..253914,255454..255577,256236..256800)
location: region:251901-256800:1
so has part: feature:251901-252104:1:exon
so has part: feature:253111-253289:1:exon
so has part: feature:253755-253914:1:exon
so has part: feature:255454-255577:1:exon
so has part: feature:256236-256800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251901-252104:1:exon

position:252104:1
position: 252104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253111-253289:1:exon

position:253111:1
position: 253111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253289:1
position: 253289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:253755-253914:1:exon

position:253755:1
position: 253755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253914:1
position: 253914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255454-255577:1:exon

position:255454:1
position: 255454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255577:1
position: 255577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:256236-256800:1:exon

position:256236:1
position: 256236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NRAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase NRas
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAQELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSEDGNQGCMGLSCIVM
SIO_010081: NRAS
subclass of: SO_0000673
so part of: NRAS
location: join(251994..252104,253111..253289,253755..253914,255454..255573)
location: region:251994-255573:1
so has part: feature:251994-252104:1:exon
so has part: feature:253111-253289:1:exon
so has part: feature:253755-253914:1:exon
so has part: feature:255454-255573:1:exon

XP_040391482.1
type: Protein
SIO_000068: ncbiprotein

position:251994:1
position: 251994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255573:1
position: 255573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251994-252104:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253111-253289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:253755-253914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255454-255573:1:exon

LOC121059129
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(257564..268680)
location: region:257564-268680:-1
so has part: feature:257564-268680:-1:exon
subclass of: SO_0000011

121059129
type: Gene
SIO_000068: ncbigene

position:257564:-1
position: 257564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268680:-1
position: 268680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257564-268680:-1:exon

LOC121059129
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059129
product: uncharacterized LOC121059129
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814440.1
SIO_010081: LOC121059129
subclass of: SO_0000673
so part of: LOC121059129
location: complement(join(257564..263664,267166..268680))
location: region:257564-268680:-1
so has part: feature:267166-268680:-1:exon
so has part: feature:257564-263664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267166-268680:-1:exon

position:267166:-1
position: 267166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257564-263664:-1:exon

position:263664:-1
position: 263664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: AMPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 263656..281102
location: region:263656-281102:1
so has part: feature:263656-281102:1:exon
subclass of: SO_0000010

121059126
type: Gene
SIO_000068: ncbigene

position:263656:1
position: 263656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281102:1
position: 281102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263656-281102:1:exon

AMPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AMPD1
product: adenosine monophosphate deaminase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535544.1
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(263656..264777,268026..268200,268699..268864,269989..270151,270378..270597,271114..271243,271524..271718,271949..272080,272178..272341,272472..272598,273060..273223,273570..273690,274143..274316,274491..274601,274762..274913,280971..281102)
location: region:263656-281102:1
so has part: feature:263656-264777:1:exon
so has part: feature:268026-268200:1:exon
so has part: feature:268699-268864:1:exon
so has part: feature:269989-270151:1:exon
so has part: feature:270378-270597:1:exon
so has part: feature:271114-271243:1:exon
so has part: feature:271524-271718:1:exon
so has part: feature:271949-272080:1:exon
so has part: feature:272178-272341:1:exon
so has part: feature:272472-272598:1:exon
so has part: feature:273060-273223:1:exon
so has part: feature:273570-273690:1:exon
so has part: feature:274143-274316:1:exon
so has part: feature:274491-274601:1:exon
so has part: feature:274762-274913:1:exon
so has part: feature:280971-281102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263656-264777:1:exon

position:264777:1
position: 264777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268026-268200:1:exon

position:268026:1
position: 268026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268200:1
position: 268200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268699-268864:1:exon

position:268699:1
position: 268699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268864:1
position: 268864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269989-270151:1:exon

position:269989:1
position: 269989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270151:1
position: 270151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270378-270597:1:exon

position:270378:1
position: 270378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270597:1
position: 270597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:271114-271243:1:exon

position:271114:1
position: 271114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271243:1
position: 271243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:271524-271718:1:exon

position:271524:1
position: 271524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271718:1
position: 271718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:271949-272080:1:exon

position:271949:1
position: 271949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272080:1
position: 272080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:272178-272341:1:exon

position:272178:1
position: 272178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272341:1
position: 272341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:272472-272598:1:exon

position:272472:1
position: 272472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272598:1
position: 272598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:273060-273223:1:exon

position:273060:1
position: 273060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273223:1
position: 273223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:273570-273690:1:exon

position:273570:1
position: 273570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273690:1
position: 273690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:274143-274316:1:exon

position:274143:1
position: 274143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274316:1
position: 274316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:274491-274601:1:exon

position:274491:1
position: 274491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274601:1
position: 274601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:274762-274913:1:exon

position:274762:1
position: 274762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274913:1
position: 274913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:280971-281102:1:exon

position:280971:1
position: 280971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AMPD1
product: adenosine monophosphate deaminase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535543.1
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(263656..264777,268026..268200,268699..268864,269989..270151,270378..270597,271114..271243,271524..271718,271949..272080,272178..272341,272472..272598,273060..273223,273570..273690,274143..274316,274491..274824)
location: region:263656-274824:1
so has part: feature:263656-264777:1:exon
so has part: feature:268026-268200:1:exon
so has part: feature:268699-268864:1:exon
so has part: feature:269989-270151:1:exon
so has part: feature:270378-270597:1:exon
so has part: feature:271114-271243:1:exon
so has part: feature:271524-271718:1:exon
so has part: feature:271949-272080:1:exon
so has part: feature:272178-272341:1:exon
so has part: feature:272472-272598:1:exon
so has part: feature:273060-273223:1:exon
so has part: feature:273570-273690:1:exon
so has part: feature:274143-274316:1:exon
so has part: feature:274491-274824:1:exon

position:274824:1
position: 274824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263656-264777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268026-268200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268699-268864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269989-270151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270378-270597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271114-271243:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271524-271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:271949-272080:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272178-272341:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272472-272598:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273060-273223:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273570-273690:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:274143-274316:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:274491-274824:1:exon

AMPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AMPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 1 isoform X2
translation: MSRVKIPEMDEAMRSFAEKVFASEVKDEAIRQEISPFDVEEICPISRQEMRTHMMLQESSSTAEKRRKRMLRLKTIALALPVAQKSITRLSTIDEVISTSPLYQTVPDFQRVQITGDYASGVTVEDFEVVCKGLYRALCIREKYMLKSVQRFPRTPSQYLRAIEGDVWRATDAGPVFTPPVKDGQDPFETGNLAEDLGYPLEMKDGVVYIYGDKAAVGRKEPKDLPYPCLEHFVDDMNFLLALIAQGPVKTYAHRRLKFLSSKFQVHEMLNEMEEMKELKNNPHRDFYNCRKVDTHIHAAACMNQKHLLRFIKKSYRVDADRVVYDSKGKQLTLKQLFQQLNLHPYDLTVDSLDVHAGRQTFQRFDKFNAKYNPVGASELRDLYLKTENAINGEYFATIIKEVGSDLEDAKYQYAEPRLSIYGRSAEEWHKLASWFNRHRVYSPNMKWMIQVPRIYDVFRSQNFLPHFGKMLENIFVPVFEATVNPQTHKELSVFLRHITGFDSVDDESKHSGHMFSTKSPKPEQWTSAKNPSYTYYIYYMYANILVLNNLRRQRGMNTFLFRPHCGEAGAITHLLAAFMTADNISHGLNLKKSPVLQYLYFLAQIPIAMSPLSNNSLFLEYAKNPLPDFHQKGLMVSLSTDDPMQFHFTKEPLMEEYAIAAQVFKLSTCDMCEIARNSVLQCGLSHEEKAKFLGENYQEEGPQGNDIRKTNVAQIRMAYRYETWCYELNLIAEGLKAELF
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(264756..264777,268026..268200,268699..268864,269989..270151,270378..270597,271114..271243,271524..271718,271949..272080,272178..272341,272472..272598,273060..273223,273570..273690,274143..274316,274491..274601,274762..274913,280971..280980)
location: region:264756-280980:1
so has part: feature:264756-264777:1:exon
so has part: feature:268026-268200:1:exon
so has part: feature:268699-268864:1:exon
so has part: feature:269989-270151:1:exon
so has part: feature:270378-270597:1:exon
so has part: feature:271114-271243:1:exon
so has part: feature:271524-271718:1:exon
so has part: feature:271949-272080:1:exon
so has part: feature:272178-272341:1:exon
so has part: feature:272472-272598:1:exon
so has part: feature:273060-273223:1:exon
so has part: feature:273570-273690:1:exon
so has part: feature:274143-274316:1:exon
so has part: feature:274491-274601:1:exon
so has part: feature:274762-274913:1:exon
so has part: feature:280971-280980:1:exon

XP_040391478.1
type: Protein
SIO_000068: ncbiprotein

position:264756:1
position: 264756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280980:1
position: 280980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264756-264777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268026-268200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268699-268864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269989-270151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270378-270597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271114-271243:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271524-271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:271949-272080:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272178-272341:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272472-272598:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273060-273223:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273570-273690:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:274143-274316:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:274491-274601:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:274762-274913:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:280971-280980:1:exon

AMPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AMPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 1 isoform X1
translation: MSRVKIPEMDEAMRSFAEKVFASEVKDEAIRQEISPFDVEEICPISRQEMRTHMMLQESSSTAEKRRKRMLRLKTIALALPVAQKSITRLSTIDEVISTSPLYQTVPDFQRVQITGDYASGVTVEDFEVVCKGLYRALCIREKYMLKSVQRFPRTPSQYLRAIEGDVWRATDAGPVFTPPVKDGQDPFETGNLAEDLGYPLEMKDGVVYIYGDKAAVGRKEPKDLPYPCLEHFVDDMNFLLALIAQGPVKTYAHRRLKFLSSKFQVHEMLNEMEEMKELKNNPHRDFYNCRKVDTHIHAAACMNQKHLLRFIKKSYRVDADRVVYDSKGKQLTLKQLFQQLNLHPYDLTVDSLDVHAGRQTFQRFDKFNAKYNPVGASELRDLYLKTENAINGEYFATIIKEVGSDLEDAKYQYAEPRLSIYGRSAEEWHKLASWFNRHRVYSPNMKWMIQVPRIYDVFRSQNFLPHFGKMLENIFVPVFEATVNPQTHKELSVFLRHITGFDSVDDESKHSGHMFSTKSPKPEQWTSAKNPSYTYYIYYMYANILVLNNLRRQRGMNTFLFRPHCGEAGAITHLLAAFMTADNISHGLNLKKSPVLQYLYFLAQIPIAMSPLSNNSLFLEYAKNPLPDFHQKGLMVSLSTDDPMQFHFTKEPLMEEYAIAAQVFKLSTCDMCEIARNSVLQCGLSHEVGAPRGGQARLKGPGAQLCRLARGRALRGSSRCFPLVLLAGGREHRCPALCVAGESQVPG
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(264756..264777,268026..268200,268699..268864,269989..270151,270378..270597,271114..271243,271524..271718,271949..272080,272178..272341,272472..272598,273060..273223,273570..273690,274143..274316,274491..274784)
location: region:264756-274784:1
so has part: feature:264756-264777:1:exon
so has part: feature:268026-268200:1:exon
so has part: feature:268699-268864:1:exon
so has part: feature:269989-270151:1:exon
so has part: feature:270378-270597:1:exon
so has part: feature:271114-271243:1:exon
so has part: feature:271524-271718:1:exon
so has part: feature:271949-272080:1:exon
so has part: feature:272178-272341:1:exon
so has part: feature:272472-272598:1:exon
so has part: feature:273060-273223:1:exon
so has part: feature:273570-273690:1:exon
so has part: feature:274143-274316:1:exon
so has part: feature:274491-274784:1:exon

XP_040391477.1
type: Protein
SIO_000068: ncbiprotein

position:274784:1
position: 274784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264756-264777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268026-268200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268699-268864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269989-270151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270378-270597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271114-271243:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271524-271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:271949-272080:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272178-272341:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272472-272598:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273060-273223:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273570-273690:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:274143-274316:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:274491-274784:1:exon

DENND2C
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 276276..298477
location: region:276276-298477:1
so has part: feature:276276-298477:1:exon
subclass of: SO_0000010

121059125
type: Gene
SIO_000068: ncbigene

position:276276:1
position: 276276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298477:1
position: 298477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276276-298477:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DENND2C
product: DENN domain containing 2C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040535539.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(276276..277755,280971..281935,282470..282618,283187..283299,283670..283837,286537..286630,287374..287418,288730..288917,291519..291628,292141..292210,292560..292637,293330..293470,293847..293995,294378..294555,294872..294913,295892..295997,296822..297061,297596..297682,298267..298477)
location: region:276276-298477:1
so has part: feature:276276-277755:1:exon
so has part: feature:280971-281935:1:exon
so has part: feature:282470-282618:1:exon
so has part: feature:283187-283299:1:exon
so has part: feature:283670-283837:1:exon
so has part: feature:286537-286630:1:exon
so has part: feature:287374-287418:1:exon
so has part: feature:288730-288917:1:exon
so has part: feature:291519-291628:1:exon
so has part: feature:292141-292210:1:exon
so has part: feature:292560-292637:1:exon
so has part: feature:293330-293470:1:exon
so has part: feature:293847-293995:1:exon
so has part: feature:294378-294555:1:exon
so has part: feature:294872-294913:1:exon
so has part: feature:295892-295997:1:exon
so has part: feature:296822-297061:1:exon
so has part: feature:297596-297682:1:exon
so has part: feature:298267-298477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276276-277755:1:exon

position:277755:1
position: 277755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280971-281935:1:exon

position:281935:1
position: 281935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282470-282618:1:exon

position:282470:1
position: 282470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282618:1
position: 282618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283187-283299:1:exon

position:283187:1
position: 283187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283299:1
position: 283299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283670-283837:1:exon

position:283670:1
position: 283670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283837:1
position: 283837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:286537-286630:1:exon

position:286537:1
position: 286537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286630:1
position: 286630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:287374-287418:1:exon

position:287374:1
position: 287374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287418:1
position: 287418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288730-288917:1:exon

position:288730:1
position: 288730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288917:1
position: 288917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291519-291628:1:exon

position:291519:1
position: 291519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291628:1
position: 291628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:292141-292210:1:exon

position:292141:1
position: 292141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292210:1
position: 292210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:292560-292637:1:exon

position:292560:1
position: 292560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292637:1
position: 292637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:293330-293470:1:exon

position:293330:1
position: 293330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293470:1
position: 293470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:293847-293995:1:exon

position:293847:1
position: 293847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293995:1
position: 293995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:294378-294555:1:exon

position:294378:1
position: 294378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294555:1
position: 294555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:294872-294913:1:exon

position:294872:1
position: 294872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294913:1
position: 294913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:295892-295997:1:exon

position:295892:1
position: 295892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295997:1
position: 295997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:296822-297061:1:exon

position:296822:1
position: 296822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297061:1
position: 297061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:297596-297682:1:exon

position:297596:1
position: 297596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297682:1
position: 297682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:298267-298477:1:exon

position:298267:1
position: 298267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X1
translation: MPVVQQDKVVLTGSPCRSDTQGFLETAGCFGVSCQLDTCRAQVNLSKAGDGVFVSTSALTMHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTKKGGKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPWKALPPGNFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASAAKEASLQKKHGGDSVSSSNNLEKRTASRSIKGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPTGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHVFMETQMFAGFIQDRELSKNVVKGLFEVRALEYLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(277732..277755,280971..281935,282470..282618,283187..283299,283670..283837,286537..286630,287374..287418,288730..288917,291519..291628,292141..292210,292560..292637,293330..293470,293847..293995,294378..294555,294872..294913,295892..295997,296822..297061,297596..297682,298267..298298)
location: region:277732-298298:1
so has part: feature:277732-277755:1:exon
so has part: feature:280971-281935:1:exon
so has part: feature:282470-282618:1:exon
so has part: feature:283187-283299:1:exon
so has part: feature:283670-283837:1:exon
so has part: feature:286537-286630:1:exon
so has part: feature:287374-287418:1:exon
so has part: feature:288730-288917:1:exon
so has part: feature:291519-291628:1:exon
so has part: feature:292141-292210:1:exon
so has part: feature:292560-292637:1:exon
so has part: feature:293330-293470:1:exon
so has part: feature:293847-293995:1:exon
so has part: feature:294378-294555:1:exon
so has part: feature:294872-294913:1:exon
so has part: feature:295892-295997:1:exon
so has part: feature:296822-297061:1:exon
so has part: feature:297596-297682:1:exon
so has part: feature:298267-298298:1:exon

XP_040391473.1
type: Protein
SIO_000068: ncbiprotein

position:277732:1
position: 277732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298298:1
position: 298298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277732-277755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280971-281935:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282470-282618:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283187-283299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283670-283837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286537-286630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287374-287418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288730-288917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291519-291628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292141-292210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292560-292637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:293330-293470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:293847-293995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:294378-294555:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294872-294913:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:295892-295997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:296822-297061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:297596-297682:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:298267-298298:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DENND2C
product: DENN domain containing 2C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040535540.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(281127..281935,282470..282618,283187..283299,283670..283837,286537..286630,287374..287418,288730..288917,289596..289748,291519..291628,292141..292210,292560..292637,293330..293470,293847..293995,294378..294555,294872..294913,295892..295997,296822..297061,297596..297682,298267..298477)
location: region:281127-298477:1
so has part: feature:281127-281935:1:exon
so has part: feature:282470-282618:1:exon
so has part: feature:283187-283299:1:exon
so has part: feature:283670-283837:1:exon
so has part: feature:286537-286630:1:exon
so has part: feature:287374-287418:1:exon
so has part: feature:288730-288917:1:exon
so has part: feature:289596-289748:1:exon
so has part: feature:291519-291628:1:exon
so has part: feature:292141-292210:1:exon
so has part: feature:292560-292637:1:exon
so has part: feature:293330-293470:1:exon
so has part: feature:293847-293995:1:exon
so has part: feature:294378-294555:1:exon
so has part: feature:294872-294913:1:exon
so has part: feature:295892-295997:1:exon
so has part: feature:296822-297061:1:exon
so has part: feature:297596-297682:1:exon
so has part: feature:298267-298477:1:exon

position:281127:1
position: 281127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281127-281935:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282470-282618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283187-283299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283670-283837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286537-286630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287374-287418:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288730-288917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289596-289748:1:exon

position:289596:1
position: 289596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289748:1
position: 289748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291519-291628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292141-292210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292560-292637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:293330-293470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:293847-293995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:294378-294555:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294872-294913:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:295892-295997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:296822-297061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:297596-297682:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:298267-298477:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X2
translation: MHPTGTADGSFSRSAVQTLSRSHCRNIKQKISQWEGRTRGCSSKEKECLKDFGVKYDPGCDVLSKVKPEHTKKGGKAGSKDPKNLGLDFRENAGSCLQTDDHGDLKSCACSLASQAEENGEWQAGFLDPWKALPPGNFYASRGLWRRADAFLPGKAPPVPLDLERKQGSCGSTERELRAEEVDSFCRAERSMKDIYSVAVGQEEEPAAVPPPKPRRTFRYLAEKTASGCSNASAAKEASLQKKHGGDSVSSSNNLEKRTASRSIKGRTQRKSFEFEDIQGFRNWMAATSSHKLREETNDTAGSRLIYAQSEDNIYEDIICPTKENPYEDTRVLPLPLWKIPSVWKLPPSRSTSRAPKLPPKPSFLSRKTLELQPSLTNLQGKMVKDTTLPVTFTEWKLFRAAEAASRRKNLPWLVLKVQEIFDSKRGKKRVKLLSPTGRVTPTKGETSGNESDTENQPKNRHRGLLLVQSASKRNPHYQTLERDLIEFQEQQLFELFVVVSLHKKASEIKYTPQIIQQFPNKVCLLLELGRFMLFLSGNTVKPYYIVLHCQGSLQERKGSAVLCSRSWHDLVQAEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASQLTSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVMELCRPSDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVAILYPFTWQHTYIPVLPTSMIDIVCSPTPFLIGILSCSLPQLQDLPVEEVLIVDLCADRFLQEVSDEDEILPHKLQAALVQILEERNEILSHEQSCIQGDMPLNSLVSEAFVQFFVEIVGHYSLHMNVTEKGERVFQRELFRKSHMSRNVRHFLHVFMETQMFAGFIQDRELSKNVVKGLFEVRALEYLESVTETEPTGMNKILRSLGSKMKFLQKK
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(281127..281935,282470..282618,283187..283299,283670..283837,286537..286630,287374..287418,288730..288917,289596..289748,291519..291628,292141..292210,292560..292637,293330..293470,293847..293995,294378..294555,294872..294913,295892..295997,296822..297061,297596..297682,298267..298298)
location: region:281127-298298:1
so has part: feature:281127-281935:1:exon
so has part: feature:282470-282618:1:exon
so has part: feature:283187-283299:1:exon
so has part: feature:283670-283837:1:exon
so has part: feature:286537-286630:1:exon
so has part: feature:287374-287418:1:exon
so has part: feature:288730-288917:1:exon
so has part: feature:289596-289748:1:exon
so has part: feature:291519-291628:1:exon
so has part: feature:292141-292210:1:exon
so has part: feature:292560-292637:1:exon
so has part: feature:293330-293470:1:exon
so has part: feature:293847-293995:1:exon
so has part: feature:294378-294555:1:exon
so has part: feature:294872-294913:1:exon
so has part: feature:295892-295997:1:exon
so has part: feature:296822-297061:1:exon
so has part: feature:297596-297682:1:exon
so has part: feature:298267-298298:1:exon

XP_040391474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281127-281935:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282470-282618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283187-283299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283670-283837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286537-286630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287374-287418:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288730-288917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289596-289748:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291519-291628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292141-292210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292560-292637:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:293330-293470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:293847-293995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:294378-294555:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294872-294913:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:295892-295997:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:296822-297061:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:297596-297682:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:298267-298298:1:exon

BCAS2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 298535..302288
location: region:298535-302288:1
so has part: feature:298535-302288:1:exon
subclass of: SO_0000010

121059127
type: Gene
SIO_000068: ncbigene

position:298535:1
position: 298535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302288:1
position: 302288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298535-302288:1:exon

BCAS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BCAS2
product: BCAS2 pre-mRNA processing factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535547.1
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(298535..298697,298767..298859,298942..299012,300305..300355,301433..301513,302081..302288)
location: region:298535-302288:1
so has part: feature:298535-298697:1:exon
so has part: feature:298767-298859:1:exon
so has part: feature:298942-299012:1:exon
so has part: feature:300305-300355:1:exon
so has part: feature:301433-301513:1:exon
so has part: feature:302081-302288:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298535-298697:1:exon

position:298697:1
position: 298697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298767-298859:1:exon

position:298767:1
position: 298767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298859:1
position: 298859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298942-299012:1:exon

position:298942:1
position: 298942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299012:1
position: 299012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300305-300355:1:exon

position:300305:1
position: 300305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300355:1
position: 300355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301433-301513:1:exon

position:301433:1
position: 301433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301513:1
position: 301513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:302081-302288:1:exon

position:302081:1
position: 302081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCAS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BCAS2
product: BCAS2 pre-mRNA processing factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535545.1
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(298540..298697,298767..298859,298942..299012,299083..299244,300305..300355,301433..301513,302081..302288)
location: region:298540-302288:1
so has part: feature:298540-298697:1:exon
so has part: feature:298767-298859:1:exon
so has part: feature:298942-299012:1:exon
so has part: feature:299083-299244:1:exon
so has part: feature:300305-300355:1:exon
so has part: feature:301433-301513:1:exon
so has part: feature:302081-302288:1:exon

position:298540:1
position: 298540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298540-298697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298767-298859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298942-299012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299083-299244:1:exon

position:299083:1
position: 299083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299244:1
position: 299244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300305-300355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301433-301513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302081-302288:1:exon

BCAS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BCAS2
product: BCAS2 pre-mRNA processing factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040535546.1
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(298555..298697,298942..299012,299083..299244,300305..300355,301433..301513,302081..302288)
location: region:298555-302288:1
so has part: feature:298555-298697:1:exon
so has part: feature:298942-299012:1:exon
so has part: feature:299083-299244:1:exon
so has part: feature:300305-300355:1:exon
so has part: feature:301433-301513:1:exon
so has part: feature:302081-302288:1:exon

position:298555:1
position: 298555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298555-298697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298942-299012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299083-299244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300305-300355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301433-301513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302081-302288:1:exon

BCAS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SPF27 isoform X1
translation: MAGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAQDYSAFETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLREMESTWVSLVSKNYEIERTIVQLENEISQIKQQQGEANKENIQQQDF
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(298605..298697,298767..298859,298942..299012,299083..299244,300305..300355,301433..301513,302081..302210)
location: region:298605-302210:1
so has part: feature:298605-298697:1:exon
so has part: feature:298767-298859:1:exon
so has part: feature:298942-299012:1:exon
so has part: feature:299083-299244:1:exon
so has part: feature:300305-300355:1:exon
so has part: feature:301433-301513:1:exon
so has part: feature:302081-302210:1:exon

XP_040391479.1
type: Protein
SIO_000068: ncbiprotein

position:298605:1
position: 298605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302210:1
position: 302210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298605-298697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298767-298859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298942-299012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299083-299244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300305-300355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301433-301513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302081-302210:1:exon

BCAS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SPF27 isoform X3
translation: MAGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAQDYSAFETEIMRNEFERLAARQPLELLSMKRHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLREMESTWVSLVSKNYEIERTIVQLENEISQIKQQQGEANKENIQQQDF
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(298605..298697,298767..298859,298942..299012,300305..300355,301433..301513,302081..302210)
location: region:298605-302210:1
so has part: feature:298605-298697:1:exon
so has part: feature:298767-298859:1:exon
so has part: feature:298942-299012:1:exon
so has part: feature:300305-300355:1:exon
so has part: feature:301433-301513:1:exon
so has part: feature:302081-302210:1:exon

XP_040391481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298605-298697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298767-298859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298942-299012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300305-300355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301433-301513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302081-302210:1:exon

BCAS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SPF27 isoform X2
translation: MAGPGLVAGDVVVDALPYFDQGYEAPGVREATEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLREMESTWVSLVSKNYEIERTIVQLENEISQIKQQQGEANKENIQQQDF
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(298605..298697,298942..299012,299083..299244,300305..300355,301433..301513,302081..302210)
location: region:298605-302210:1
so has part: feature:298605-298697:1:exon
so has part: feature:298942-299012:1:exon
so has part: feature:299083-299244:1:exon
so has part: feature:300305-300355:1:exon
so has part: feature:301433-301513:1:exon
so has part: feature:302081-302210:1:exon

XP_040391480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298605-298697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298942-299012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299083-299244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300305-300355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301433-301513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302081-302210:1:exon

TRIM33
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 302647..340038
location: region:302647-340038:1
so has part: feature:302647-340038:1:exon
subclass of: SO_0000010

121059204
type: Gene
SIO_000068: ncbigene

position:302647:1
position: 302647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340038:1
position: 340038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302647-340038:1:exon

TRIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TRIM33
product: tripartite motif containing 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535704.1
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(302647..303119,315477..315595,315702..315849,317989..318121,320899..321015,323666..323780,324989..325135,325631..325748,327814..328058,328298..328462,329310..329510,331363..331495,332544..332607,332896..333055,334119..334465,334975..335098,336061..336135,336735..336887,338533..338583,338666..340038)
location: region:302647-340038:1
so has part: feature:302647-303119:1:exon
so has part: feature:315477-315595:1:exon
so has part: feature:315702-315849:1:exon
so has part: feature:317989-318121:1:exon
so has part: feature:320899-321015:1:exon
so has part: feature:323666-323780:1:exon
so has part: feature:324989-325135:1:exon
so has part: feature:325631-325748:1:exon
so has part: feature:327814-328058:1:exon
so has part: feature:328298-328462:1:exon
so has part: feature:329310-329510:1:exon
so has part: feature:331363-331495:1:exon
so has part: feature:332544-332607:1:exon
so has part: feature:332896-333055:1:exon
so has part: feature:334119-334465:1:exon
so has part: feature:334975-335098:1:exon
so has part: feature:336061-336135:1:exon
so has part: feature:336735-336887:1:exon
so has part: feature:338533-338583:1:exon
so has part: feature:338666-340038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302647-303119:1:exon

position:303119:1
position: 303119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315477-315595:1:exon

position:315477:1
position: 315477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315595:1
position: 315595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315702-315849:1:exon

position:315702:1
position: 315702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315849:1
position: 315849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317989-318121:1:exon

position:317989:1
position: 317989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318121:1
position: 318121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320899-321015:1:exon

position:320899:1
position: 320899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321015:1
position: 321015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:323666-323780:1:exon

position:323666:1
position: 323666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323780:1
position: 323780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:324989-325135:1:exon

position:324989:1
position: 324989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325135:1
position: 325135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:325631-325748:1:exon

position:325631:1
position: 325631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325748:1
position: 325748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:327814-328058:1:exon

position:327814:1
position: 327814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328058:1
position: 328058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:328298-328462:1:exon

position:328298:1
position: 328298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328462:1
position: 328462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:329310-329510:1:exon

position:329310:1
position: 329310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329510:1
position: 329510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:331363-331495:1:exon

position:331363:1
position: 331363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331495:1
position: 331495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:332544-332607:1:exon

position:332544:1
position: 332544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332607:1
position: 332607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:332896-333055:1:exon

position:332896:1
position: 332896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333055:1
position: 333055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:334119-334465:1:exon

position:334119:1
position: 334119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334465:1
position: 334465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:334975-335098:1:exon

position:334975:1
position: 334975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335098:1
position: 335098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:336061-336135:1:exon

position:336061:1
position: 336061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336135:1
position: 336135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:336735-336887:1:exon

position:336735:1
position: 336735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336887:1
position: 336887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:338533-338583:1:exon

position:338533:1
position: 338533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338583:1
position: 338583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:338666-340038:1:exon

position:338666:1
position: 338666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM33
translation: MAENKGGGGGGDGAAEAGPGGGCGPEPVAASPSGAAPPAPAAAPPEERESPGAAAAAERALGEAEAEAAAGPGAVPGPGPGPSPLPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPKLLPCLHSFCRRCLPEPERQLSVPVPGGANGDIQQVGVIRCPICRQECRQIDLVDNYFVKDTSETPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSEAVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVNFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQHLENVTKERQMKLIQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQAPPGTNHVSKTPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMGQPSGSVPRQTGPQILQQQPPRLISMQTMQRGNMNCGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNNTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSVNFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELEALGSLENHVKTEPGDLSESCKQSGHSLLNGKSPMRSLMHRSARIGGEGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLSKPEVEYDCDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDSDEDFIQPRRKRLKSDERPVHIK
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(302663..303119,315477..315595,315702..315849,317989..318121,320899..321015,323666..323780,324989..325135,325631..325748,327814..328058,328298..328462,329310..329510,331363..331495,332544..332607,332896..333055,334119..334465,334975..335098,336061..336135,336735..336887,338533..338583,338666..338878)
location: region:302663-338878:1
so has part: feature:302663-303119:1:exon
so has part: feature:315477-315595:1:exon
so has part: feature:315702-315849:1:exon
so has part: feature:317989-318121:1:exon
so has part: feature:320899-321015:1:exon
so has part: feature:323666-323780:1:exon
so has part: feature:324989-325135:1:exon
so has part: feature:325631-325748:1:exon
so has part: feature:327814-328058:1:exon
so has part: feature:328298-328462:1:exon
so has part: feature:329310-329510:1:exon
so has part: feature:331363-331495:1:exon
so has part: feature:332544-332607:1:exon
so has part: feature:332896-333055:1:exon
so has part: feature:334119-334465:1:exon
so has part: feature:334975-335098:1:exon
so has part: feature:336061-336135:1:exon
so has part: feature:336735-336887:1:exon
so has part: feature:338533-338583:1:exon
so has part: feature:338666-338878:1:exon

XP_040391638.1
type: Protein
SIO_000068: ncbiprotein

position:302663:1
position: 302663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338878:1
position: 338878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302663-303119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315477-315595:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315702-315849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317989-318121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320899-321015:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323666-323780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324989-325135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325631-325748:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327814-328058:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:328298-328462:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:329310-329510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331363-331495:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:332544-332607:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:332896-333055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:334119-334465:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:334975-335098:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:336061-336135:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:336735-336887:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:338533-338583:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338666-338878:1:exon

SYT6
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SYT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 354934..392217
location: region:354934-392217:1
so has part: feature:354934-392217:1:exon
subclass of: SO_0000010

121059319
type: Gene
SIO_000068: ncbigene

position:354934:1
position: 354934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392217:1
position: 392217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354934-392217:1:exon

SYT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYT6
product: synaptotagmin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040536062.1
SIO_010081: SYT6
subclass of: SO_0000673
so part of: SYT6
location: join(354934..355341,375732..376068,377898..378456,384407..384527,385812..385983,386646..386796,391986..392217)
location: region:354934-392217:1
so has part: feature:354934-355341:1:exon
so has part: feature:375732-376068:1:exon
so has part: feature:377898-378456:1:exon
so has part: feature:384407-384527:1:exon
so has part: feature:385812-385983:1:exon
so has part: feature:386646-386796:1:exon
so has part: feature:391986-392217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354934-355341:1:exon

position:355341:1
position: 355341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:375732-376068:1:exon

position:375732:1
position: 375732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376068:1
position: 376068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:377898-378456:1:exon

position:377898:1
position: 377898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378456:1
position: 378456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384407-384527:1:exon

position:384407:1
position: 384407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384527:1
position: 384527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:385812-385983:1:exon

position:385812:1
position: 385812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385983:1
position: 385983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:386646-386796:1:exon

position:386646:1
position: 386646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386796:1
position: 386796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:391986-392217:1:exon

position:391986:1
position: 391986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-6
translation: MSGTRDDSRCQKAVHIVSGLCRKKSLPSLDLDVCREFLLLPSDQSLSISEPELSVSLLAVIVVVCGLALVAVFLFLFWKLCWVPWRNKAISSNLAVLQSEAACNKENMADKLKDTGTISFLEAAVKISHTSPDIPAEVQMSMKDHMMRRTRIQRQTTEPASSTRHISFKRHLPRQMHVSSMDYGMDPPAVAEQPTSIGRIKPELYKQKSVDSEDPKKEAAKTCGKINFTLKYDYENETLTVRILRAFDLPAKDFCGSSDPYVKIYLLPDRKRKFQTRVHRKTLNPTFDESFHFPVPHEELASRKLHLSVFDFDRFSRHDMIGEVILENLFEASDLSRETSIWKDIQYATTESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTIKKNTLNPTYNEAIIFDIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGVNAEGLGRDHWNEMLAYPRKPIAHWHPLVEVKKSFKEWQGRAASFDSQGSCPSPKPPPTP
SIO_010081: SYT6
subclass of: SO_0000673
so part of: SYT6
location: join(355188..355341,375732..376068,377898..378456,384407..384527,385812..385983,386646..386796,391986..392057)
location: region:355188-392057:1
so has part: feature:355188-355341:1:exon
so has part: feature:375732-376068:1:exon
so has part: feature:377898-378456:1:exon
so has part: feature:384407-384527:1:exon
so has part: feature:385812-385983:1:exon
so has part: feature:386646-386796:1:exon
so has part: feature:391986-392057:1:exon

XP_040391996.1
type: Protein
SIO_000068: ncbiprotein

position:355188:1
position: 355188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392057:1
position: 392057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355188-355341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:375732-376068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377898-378456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384407-384527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385812-385983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386646-386796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391986-392057:1:exon

LOC121059320
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(392685..396326)
location: region:392685-396326:-1
so has part: feature:392685-396326:-1:exon
subclass of: SO_0000011

121059320
type: Gene
SIO_000068: ncbigene

position:392685:-1
position: 392685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396326:-1
position: 396326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392685-396326:-1:exon

LOC121059320
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059320
product: uncharacterized LOC121059320, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814484.1
SIO_010081: LOC121059320
subclass of: SO_0000673
so part of: LOC121059320
location: complement(join(392685..393851,394929..395531,395876..396326))
location: region:392685-396326:-1
so has part: feature:395876-396326:-1:exon
so has part: feature:394929-395531:-1:exon
so has part: feature:392685-393851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395876-396326:-1:exon

position:395876:-1
position: 395876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394929-395531:-1:exon

position:394929:-1
position: 394929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395531:-1
position: 395531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:392685-393851:-1:exon

position:393851:-1
position: 393851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059320
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059320
product: uncharacterized LOC121059320, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814483.1
SIO_010081: LOC121059320
subclass of: SO_0000673
so part of: LOC121059320
location: complement(join(392685..393851,394233..394423,394929..395531,395876..396326))
location: region:392685-396326:-1
so has part: feature:395876-396326:-1:exon
so has part: feature:394929-395531:-1:exon
so has part: feature:394233-394423:-1:exon
so has part: feature:392685-393851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395876-396326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394929-395531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394233-394423:-1:exon

position:394233:-1
position: 394233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394423:-1
position: 394423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:392685-393851:-1:exon

OLFML3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: OLFML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(405610..408058)
location: region:405610-408058:-1
so has part: feature:405610-408058:-1:exon
subclass of: SO_0000010

121059425
type: Gene
SIO_000068: ncbigene

position:405610:-1
position: 405610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408058:-1
position: 408058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405610-408058:-1:exon

OLFML3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: OLFML3
product: olfactomedin like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536282.1
SIO_010081: OLFML3
subclass of: SO_0000673
so part of: OLFML3
location: complement(join(405610..406674,407109..407394,407691..408058))
location: region:405610-408058:-1
so has part: feature:407691-408058:-1:exon
so has part: feature:407109-407394:-1:exon
so has part: feature:405610-406674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407691-408058:-1:exon

position:407691:-1
position: 407691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407109-407394:-1:exon

position:407109:-1
position: 407109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407394:-1
position: 407394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405610-406674:-1:exon

position:406674:-1
position: 406674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OLFML3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: OLFML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 3
translation: MGPWRCCLLLLPLLAVAPRAQQQQFMEYVERRLALLEERISQWHDQSSRYSTELRDFKNQVLGMLETAEKEREALRSEAEGAAVRVDRLEREVDYLETQNPAPPCVEVDETLMEKQVATAKQRKNEKYTKLTDCSDTIASVRAMKILKRFGSTSGLWTKDAAGNSEKIYVFDGTANDTVYVFPRMREFTLFSATRKAARIKLPYPWVGTGHLVYDGHLYYIRQQGPFQVIKFNLANKTVVDSSVFPAEEQIPVFGLSPFTYIEMAADEEGLWAIYATKENEKNICLAKLDPTSLDIEQMWDTPCPRENAEGAFVVCGALHVAYNTRLPSRSRVQCVFDVSGTLAPEDASLVYFPKRYGSHSSMKYSPRERQIYAWDDGYQIIYRMEMKKKLEV
SIO_010081: OLFML3
subclass of: SO_0000673
so part of: OLFML3
location: complement(join(405890..406674,407109..407394,407691..407801))
location: region:405890-407801:-1
so has part: feature:407691-407801:-1:exon
so has part: feature:407109-407394:-1:exon
so has part: feature:405890-406674:-1:exon

XP_040392216.1
type: Protein
SIO_000068: ncbiprotein

position:405890:-1
position: 405890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407801:-1
position: 407801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407691-407801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407109-407394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405890-406674:-1:exon

HIPK1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(408723..435794)
location: region:408723-435794:-1
so has part: feature:408723-435794:-1:exon
subclass of: SO_0000010

121059424
type: Gene
SIO_000068: ncbigene

position:408723:-1
position: 408723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435794:-1
position: 435794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408723-435794:-1:exon

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HIPK1
product: homeodomain interacting protein kinase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536281.1
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(408723..413350,414332..414468,414854..415092,415357..415572,416119..416301,416487..416629,419178..419312,420830..420951,421842..422064,422391..422553,422788..422972,423834..423920,425861..425980,427590..427713,433860..434935,435645..435794))
location: region:408723-435794:-1
so has part: feature:435645-435794:-1:exon
so has part: feature:433860-434935:-1:exon
so has part: feature:427590-427713:-1:exon
so has part: feature:425861-425980:-1:exon
so has part: feature:423834-423920:-1:exon
so has part: feature:422788-422972:-1:exon
so has part: feature:422391-422553:-1:exon
so has part: feature:421842-422064:-1:exon
so has part: feature:420830-420951:-1:exon
so has part: feature:419178-419312:-1:exon
so has part: feature:416487-416629:-1:exon
so has part: feature:416119-416301:-1:exon
so has part: feature:415357-415572:-1:exon
so has part: feature:414854-415092:-1:exon
so has part: feature:414332-414468:-1:exon
so has part: feature:408723-413350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435645-435794:-1:exon

position:435645:-1
position: 435645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433860-434935:-1:exon

position:433860:-1
position: 433860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434935:-1
position: 434935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:427590-427713:-1:exon

position:427590:-1
position: 427590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427713:-1
position: 427713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:425861-425980:-1:exon

position:425861:-1
position: 425861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425980:-1
position: 425980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423834-423920:-1:exon

position:423834:-1
position: 423834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423920:-1
position: 423920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:422788-422972:-1:exon

position:422788:-1
position: 422788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422972:-1
position: 422972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:422391-422553:-1:exon

position:422391:-1
position: 422391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422553:-1
position: 422553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:421842-422064:-1:exon

position:421842:-1
position: 421842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422064:-1
position: 422064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:420830-420951:-1:exon

position:420830:-1
position: 420830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420951:-1
position: 420951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:419178-419312:-1:exon

position:419178:-1
position: 419178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419312:-1
position: 419312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:416487-416629:-1:exon

position:416487:-1
position: 416487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416629:-1
position: 416629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:416119-416301:-1:exon

position:416119:-1
position: 416119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416301:-1
position: 416301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:415357-415572:-1:exon

position:415357:-1
position: 415357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415572:-1
position: 415572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:414854-415092:-1:exon

position:414854:-1
position: 414854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415092:-1
position: 415092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:414332-414468:-1:exon

position:414332:-1
position: 414332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414468:-1
position: 414468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:408723-413350:-1:exon

position:413350:-1
position: 413350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HIPK1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeodomain-interacting protein kinase 1
translation: MASQLQVFSPPSVSSSAFCSAKKLKVEPTVWDVSGQSSSDKYYTHSKNLPAAQGQASSSHQVANFSVPAYDQNLLLPAPSVEHIVVTAADSTGSSATASFQNSQTLTHRSNLSLLEPYQKCGLKRKSEEVDSNGSVQIIEEHPPLMLQNRPAVGAAATTTTVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPXNIMLVDPARQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLSAGTKTSRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHPFVTMTHLLDFPHSNHVKSCFQNMEICKRRVNMYDTVNQIKSPFTTHVAPNTSTNLTMSFNNQLNTVHNQASVLASNSTAAATLSLANSDVSLLNYQSALYPSSAAPVAGVAQQSVSLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMENAVPIVPQAPAAQPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLNCAAGRPALVEQTAAVLQAWPGGTQQILLPSTWQQLPGVALHNSVQPAAVIPETIGGGQQLADWRNAHSHGNQYSTLMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQNSNVPAKKNKQPAPSAAKPSTTLETVPTQVYSLIGSSPLRSTSSSSNVLVPVQEQHQPIVIPDTPSPPVSVITIRSDTDEEEDSKYKPASLGMKQRSNVISYVTVNDSPDSDSSLNSPYATDPLSSLRSTGGALELPSRGASDSSNSRTIIVPPLKAQLNDCIVATQSSGILSGTSKTKPVASVSGQSSGCCITPTGYRSHRVVTNGVQPLNLSQNQQTTVLASQERSGNAGPRRQQAYVAPLTSTISQAPYTFQHSSPVHPHLAAATANAHLSSQPHMYTYAPTTAAPLGSTTSIAHLFSPQGSSRHTQYAAHPSTLVHQVPVSVGPSLLTSANVPPAQYQHQFAPQSYIGASRGSAIYTGYPLSPTKINQYSYL
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(412865..413350,414332..414468,414854..415092,415357..415572,416119..416301,416487..416629,419178..419312,420830..420951,421842..422064,422391..422553,422788..422972,423834..423920,425861..425980,427590..427713,433860..434933))
location: region:412865-434933:-1
so has part: feature:433860-434933:-1:exon
so has part: feature:427590-427713:-1:exon
so has part: feature:425861-425980:-1:exon
so has part: feature:423834-423920:-1:exon
so has part: feature:422788-422972:-1:exon
so has part: feature:422391-422553:-1:exon
so has part: feature:421842-422064:-1:exon
so has part: feature:420830-420951:-1:exon
so has part: feature:419178-419312:-1:exon
so has part: feature:416487-416629:-1:exon
so has part: feature:416119-416301:-1:exon
so has part: feature:415357-415572:-1:exon
so has part: feature:414854-415092:-1:exon
so has part: feature:414332-414468:-1:exon
so has part: feature:412865-413350:-1:exon

XP_040392215.1
type: Protein
SIO_000068: ncbiprotein

position:412865:-1
position: 412865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434933:-1
position: 434933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433860-434933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427590-427713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425861-425980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423834-423920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422788-422972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422391-422553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421842-422064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420830-420951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:419178-419312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416487-416629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:416119-416301:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:415357-415572:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:414854-415092:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:414332-414468:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:412865-413350:-1:exon

DCLRE1B
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DCLRE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(442096..443737)
location: region:442096-443737:-1
so has part: feature:442096-443737:-1:exon
subclass of: SO_0000010

121059428
type: Gene
SIO_000068: ncbigene

position:442096:-1
position: 442096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443737:-1
position: 443737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442096-443737:-1:exon

DCLRE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DCLRE1B
product: DNA cross-link repair 1B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040536284.1
SIO_010081: DCLRE1B
subclass of: SO_0000673
so part of: DCLRE1B
location: complement(join(442096..442958,443033..443212,443276..443425,443504..443737))
location: region:442096-443737:-1
so has part: feature:443504-443737:-1:exon
so has part: feature:443276-443425:-1:exon
so has part: feature:443033-443212:-1:exon
so has part: feature:442096-442958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443504-443737:-1:exon

position:443504:-1
position: 443504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443276-443425:-1:exon

position:443276:-1
position: 443276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443425:-1
position: 443425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443033-443212:-1:exon

position:443033:-1
position: 443033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443212:-1
position: 443212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:442096-442958:-1:exon

position:442958:-1
position: 442958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLRE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DCLRE1B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 5' exonuclease Apollo
translation: MNGTVIPGTPIAVDFWSVRRAGGARLXFLSHMHADHTVGLSSTWSRPLYCSPLTARLLHHRLQVPTCWIRPLEVGQSHALGEEGXRVTLLDSNHCPGSVMFLFEGTFGTILYTGDFRYAGAMQHEPALRGRRIDRLYLDNTHCRLRQPLPSRRCATRQAARLIRAHPSHHVVVGVYSLGKEALLVDLAVEFGTWVVVSPSRLEQMRLLELPDVFTAEEGAGWIRAVDVAEIRWDTLVSWNHMHPTIAIVPTGRPVKVTHPNIYPIPYSDHSSFSELCEFVKWLRPCSIIPIIRDNMCQIYFQKYLSSDHQALPDLRTPKPVQESLQQQSKQRHRGLCASKLFSRDHSVSQGVVYESPENILRSLMARGIRFLSRTSVMSAFCSKEGCTGCHASKEKGRKN
SIO_010081: DCLRE1B
subclass of: SO_0000673
so part of: DCLRE1B
location: complement(join(442274..442958,443033..443212,443276..443425,443504..443691))
location: region:442274-443691:-1
so has part: feature:443504-443691:-1:exon
so has part: feature:443276-443425:-1:exon
so has part: feature:443033-443212:-1:exon
so has part: feature:442274-442958:-1:exon

XP_040392218.1
type: Protein
SIO_000068: ncbiprotein

position:442274:-1
position: 442274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443691:-1
position: 443691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443504-443691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443276-443425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443033-443212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442274-442958:-1:exon

AP4B1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: AP4B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 443785..452138
location: region:443785-452138:1
so has part: feature:443785-452138:1:exon
subclass of: SO_0000010

121059427
type: Gene
SIO_000068: ncbigene

position:443785:1
position: 443785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452138:1
position: 452138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443785-452138:1:exon

AP4B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AP4B1
product: adaptor related protein complex 4 subunit beta 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536283.1
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(443785..443970,444065..444289,444398..444528,444808..444956,445594..446090,446824..446907,447878..447981,448199..448406,449279..449563,449831..452138)
location: region:443785-452138:1
so has part: feature:443785-443970:1:exon
so has part: feature:444065-444289:1:exon
so has part: feature:444398-444528:1:exon
so has part: feature:444808-444956:1:exon
so has part: feature:445594-446090:1:exon
so has part: feature:446824-446907:1:exon
so has part: feature:447878-447981:1:exon
so has part: feature:448199-448406:1:exon
so has part: feature:449279-449563:1:exon
so has part: feature:449831-452138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443785-443970:1:exon

position:443970:1
position: 443970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444065-444289:1:exon

position:444065:1
position: 444065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444289:1
position: 444289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:444398-444528:1:exon

position:444398:1
position: 444398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444528:1
position: 444528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:444808-444956:1:exon

position:444808:1
position: 444808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444956:1
position: 444956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:445594-446090:1:exon

position:445594:1
position: 445594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446090:1
position: 446090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:446824-446907:1:exon

position:446824:1
position: 446824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446907:1
position: 446907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:447878-447981:1:exon

position:447878:1
position: 447878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447981:1
position: 447981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:448199-448406:1:exon

position:448199:1
position: 448199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448406:1
position: 448406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:449279-449563:1:exon

position:449279:1
position: 449279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449563:1
position: 449563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:449831-452138:1:exon

position:449831:1
position: 449831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AP4B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AP4B1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: AP-4 complex subunit beta-1
translation: MPYLGGEEALRDLRRALGNPHVQADPLRYRAAVLRVIRLMTQGADVSGLFAEMVKAGAAADVVQKKLVHLYVRAHAPRLPRLALLAVNTLRRDCADPSPAVRGLALRSLCSLRVPGAQEYVRQPLLSGLRDPASYVRRAAVLGCAKVHELQGDSEVDGALVNELYSLLRDQDPIVVVNCLRALEEILKKEGGVVINKPIAHHLLNRMADLDQWGQSEVLAFLLRYRPRAEEELFDILNLLDGYLKSSSPSVVMAATKLFLVLAREYPHVQADVLVRVKGPLLSACTSESRELCFTALCHVRQILGSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVLQVLEELKGYCTDISEELAQGAISAIGNIARTYTEQCVGILTELLGFQQEHITSAVVQAFRDLVWLCPQCTDAVCQALPSCEDTIQDSEGKQALIWLLGAHGDKVPNAPYVLEDFVENVKSEVFPAVKMELLTALVRLFLSRPAECQDMLGRLLYHCIEEEKDMAVRDRGLFYYRLLQSGVEEVKRVLCSPKSDPSLGLLEDQTEQPVNTWASEFNSLVPVYGRAHWALVTAQQPVESCYAFSPCTDSGNRGTESLISEGNKEVLKVHPDTGNLTLIPDVYLTAEQFEKTWLSLDISCQHSVPWGRTVHPDTIQTAFHVVHIHTIAMSKAGVQPWKAYFSAQDDTGCLFLTELLLETEDSEMQVSVKQSEAKPEALQAFMSVFRTAMGAVAGLRS
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(443858..443970,444065..444289,444398..444528,444808..444956,445594..446090,446824..446907,447878..447981,448199..448406,449279..449563,449831..450258)
location: region:443858-450258:1
so has part: feature:443858-443970:1:exon
so has part: feature:444065-444289:1:exon
so has part: feature:444398-444528:1:exon
so has part: feature:444808-444956:1:exon
so has part: feature:445594-446090:1:exon
so has part: feature:446824-446907:1:exon
so has part: feature:447878-447981:1:exon
so has part: feature:448199-448406:1:exon
so has part: feature:449279-449563:1:exon
so has part: feature:449831-450258:1:exon

XP_040392217.1
type: Protein
SIO_000068: ncbiprotein

position:443858:1
position: 443858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450258:1
position: 450258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443858-443970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444065-444289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444398-444528:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444808-444956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445594-446090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:446824-446907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447878-447981:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448199-448406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449279-449563:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449831-450258:1:exon

BCL2L15
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: BCL2L15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452768..456984
location: region:452768-456984:1
so has part: feature:452768-456984:1:exon
subclass of: SO_0000010

121059429
type: Gene
SIO_000068: ncbigene

position:452768:1
position: 452768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456984:1
position: 456984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452768-456984:1:exon

BCL2L15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: BCL2L15
product: BCL2 like 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040536285.1
SIO_010081: BCL2L15
subclass of: SO_0000673
so part of: BCL2L15
location: join(452768..453028,455096..455238,456063..456278,456804..456984)
location: region:452768-456984:1
so has part: feature:452768-453028:1:exon
so has part: feature:455096-455238:1:exon
so has part: feature:456063-456278:1:exon
so has part: feature:456804-456984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452768-453028:1:exon

position:453028:1
position: 453028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455096-455238:1:exon

position:455096:1
position: 455096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455238:1
position: 455238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456063-456278:1:exon

position:456063:1
position: 456063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456278:1
position: 456278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456804-456984:1:exon

position:456804:1
position: 456804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCL2L15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: BCL2L15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bcl-2-like protein 15
translation: MTTFEEQTEHVVNALYYDLLCGDEIDNRCLQTDSGGPVPFAGEPPSDFDPVIIASRLRQIGDQCNMDFERVSSEVLAEVLTGKMEKFGAAVDSLSRSWSDQNPEMVYERAFLSVSVKLMMYILKKVPSVFHPSQLITVINGNAQVKNYIEASGGWENLDD
SIO_010081: BCL2L15
subclass of: SO_0000673
so part of: BCL2L15
location: join(452923..453028,455096..455238,456063..456278,456804..456821)
location: region:452923-456821:1
so has part: feature:452923-453028:1:exon
so has part: feature:455096-455238:1:exon
so has part: feature:456063-456278:1:exon
so has part: feature:456804-456821:1:exon

XP_040392219.1
type: Protein
SIO_000068: ncbiprotein

position:452923:1
position: 452923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456821:1
position: 456821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452923-453028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455096-455238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456063-456278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456804-456821:1:exon

PTPN22
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PTPN22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 458959..478935
location: region:458959-478935:1
so has part: feature:458959-478935:1:exon
subclass of: SO_0000010

121059377
type: Gene
SIO_000068: ncbigene

position:458959:1
position: 458959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478935:1
position: 478935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458959-478935:1:exon

PTPN22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PTPN22
product: protein tyrosine phosphatase non-receptor type 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 long SRA reads, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040536170.1
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(458959..459339,463163..463271,464081..464157,465079..465174,465585..465623,466100..466171,466261..466320,466737..466879,467359..467425,468295..468372,468961..469053,470510..470586,471448..472172,473063..473173,473318..473448,473983..474010,474417..474497,474814..474917,475572..475602,476328..476405,477239..478935)
location: region:458959-478935:1
so has part: feature:458959-459339:1:exon
so has part: feature:463163-463271:1:exon
so has part: feature:464081-464157:1:exon
so has part: feature:465079-465174:1:exon
so has part: feature:465585-465623:1:exon
so has part: feature:466100-466171:1:exon
so has part: feature:466261-466320:1:exon
so has part: feature:466737-466879:1:exon
so has part: feature:467359-467425:1:exon
so has part: feature:468295-468372:1:exon
so has part: feature:468961-469053:1:exon
so has part: feature:470510-470586:1:exon
so has part: feature:471448-472172:1:exon
so has part: feature:473063-473173:1:exon
so has part: feature:473318-473448:1:exon
so has part: feature:473983-474010:1:exon
so has part: feature:474417-474497:1:exon
so has part: feature:474814-474917:1:exon
so has part: feature:475572-475602:1:exon
so has part: feature:476328-476405:1:exon
so has part: feature:477239-478935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458959-459339:1:exon

position:459339:1
position: 459339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463163-463271:1:exon

position:463163:1
position: 463163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463271:1
position: 463271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464081-464157:1:exon

position:464081:1
position: 464081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464157:1
position: 464157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:465079-465174:1:exon

position:465079:1
position: 465079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465174:1
position: 465174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:465585-465623:1:exon

position:465585:1
position: 465585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465623:1
position: 465623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:466100-466171:1:exon

position:466100:1
position: 466100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466171:1
position: 466171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:466261-466320:1:exon

position:466261:1
position: 466261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466320:1
position: 466320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:466737-466879:1:exon

position:466737:1
position: 466737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466879:1
position: 466879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:467359-467425:1:exon

position:467359:1
position: 467359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467425:1
position: 467425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:468295-468372:1:exon

position:468295:1
position: 468295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468372:1
position: 468372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:468961-469053:1:exon

position:468961:1
position: 468961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469053:1
position: 469053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:470510-470586:1:exon

position:470510:1
position: 470510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470586:1
position: 470586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:471448-472172:1:exon

position:471448:1
position: 471448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472172:1
position: 472172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:473063-473173:1:exon

position:473063:1
position: 473063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473173:1
position: 473173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:473318-473448:1:exon

position:473318:1
position: 473318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473448:1
position: 473448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:473983-474010:1:exon

position:473983:1
position: 473983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474010:1
position: 474010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:474417-474497:1:exon

position:474417:1
position: 474417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474497:1
position: 474497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:474814-474917:1:exon

position:474814:1
position: 474814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474917:1
position: 474917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:475572-475602:1:exon

position:475572:1
position: 475572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475602:1
position: 475602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:476328-476405:1:exon

position:476328:1
position: 476328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476405:1
position: 476405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:477239-478935:1:exon

position:477239:1
position: 477239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPN22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PTPN22
product: protein tyrosine phosphatase non-receptor type 22, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84 long SRA reads, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040536171.1
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(458985..459339,463163..463271,464081..464157,465079..465174,465585..465623,466100..466171,466261..466320,466737..466879,467359..467425,468295..468372,468961..469053,470510..470586,471448..472172,473090..473173,473318..473448,473983..474010,474417..474497,474814..474917,475572..475602,476328..476405,477239..478935)
location: region:458985-478935:1
so has part: feature:458985-459339:1:exon
so has part: feature:463163-463271:1:exon
so has part: feature:464081-464157:1:exon
so has part: feature:465079-465174:1:exon
so has part: feature:465585-465623:1:exon
so has part: feature:466100-466171:1:exon
so has part: feature:466261-466320:1:exon
so has part: feature:466737-466879:1:exon
so has part: feature:467359-467425:1:exon
so has part: feature:468295-468372:1:exon
so has part: feature:468961-469053:1:exon
so has part: feature:470510-470586:1:exon
so has part: feature:471448-472172:1:exon
so has part: feature:473090-473173:1:exon
so has part: feature:473318-473448:1:exon
so has part: feature:473983-474010:1:exon
so has part: feature:474417-474497:1:exon
so has part: feature:474814-474917:1:exon
so has part: feature:475572-475602:1:exon
so has part: feature:476328-476405:1:exon
so has part: feature:477239-478935:1:exon

position:458985:1
position: 458985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458985-459339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463163-463271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464081-464157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465079-465174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465585-465623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466100-466171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:466261-466320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466737-466879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467359-467425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468295-468372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468961-469053:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:470510-470586:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471448-472172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:473090-473173:1:exon

position:473090:1
position: 473090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:473318-473448:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473983-474010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:474417-474497:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:474814-474917:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:475572-475602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:476328-476405:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:477239-478935:1:exon

PTPN22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PTPN22
product: protein tyrosine phosphatase non-receptor type 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040536169.1
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(458987..459339,463163..463271,464081..464157,465079..465174,465585..465623,466100..466171,466261..466320,466737..466879,467359..467425,468295..468372,468961..469053,470510..470586,471448..472172,473063..473173,473318..473448,473983..474010,474417..474497,474814..474917,475572..475602,476328..477227)
location: region:458987-477227:1
so has part: feature:458987-459339:1:exon
so has part: feature:463163-463271:1:exon
so has part: feature:464081-464157:1:exon
so has part: feature:465079-465174:1:exon
so has part: feature:465585-465623:1:exon
so has part: feature:466100-466171:1:exon
so has part: feature:466261-466320:1:exon
so has part: feature:466737-466879:1:exon
so has part: feature:467359-467425:1:exon
so has part: feature:468295-468372:1:exon
so has part: feature:468961-469053:1:exon
so has part: feature:470510-470586:1:exon
so has part: feature:471448-472172:1:exon
so has part: feature:473063-473173:1:exon
so has part: feature:473318-473448:1:exon
so has part: feature:473983-474010:1:exon
so has part: feature:474417-474497:1:exon
so has part: feature:474814-474917:1:exon
so has part: feature:475572-475602:1:exon
so has part: feature:476328-477227:1:exon

position:458987:1
position: 458987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477227:1
position: 477227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458987-459339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463163-463271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464081-464157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465079-465174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465585-465623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466100-466171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:466261-466320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466737-466879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467359-467425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468295-468372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468961-469053:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:470510-470586:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471448-472172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:473063-473173:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:473318-473448:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473983-474010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:474417-474497:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:474814-474917:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:475572-475602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:476328-477227:1:exon

PTPN22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PTPN22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 22 isoform X2
translation: MCFVLLFGHDICYVLISFKTCDEVSKPQPAASALWAGAFRYDMHLTCPFLSLAGQSRSVSCNMDQREILLQNLERTQSKKLNQEAFVEEFLKLKRQSTKYRSDKIYPTAASEHPENIKKNRYKDILPFDHSRVELSLITSDADSHYINANFIKGVYGPRAYIATQGPLSTTVIDFWRMIWEYEVLIVIMACMEFEMGKKKCERYWADLGDSSLQCGPFSIACEAEEKKNEYVIRTLKVTLNEEIRTIHQFHYQNWPDHDVPSSIDPILELICEVRCYQPDDSIPICIHCSAGCGRTGVICAIDYTQKLLKDGIVPVNFSIFSLIQEMRTQRPSIVQTKEQYKLVYDAVIELFKRQIKALDAQENSAASQIQTRHPVPKPLLTSVEDIYSLSLLTCSGQEDQNVHQHFSPVVRNEASLASLSAKGEHGSSGGRIPSLRQAISFGTLNFSNSRNAAAAEMWGTREALQKHHSLEFSSRSSGQLLVDLEPQRAGGKGAHGKAPLTRTTSTPFVLEQQGETWACDGGDAKPIFSSQSPNACYSSFQEKQQDGFSPDELNHSSQVAEASPGHRNCGQCPYRYFCSAEDPYFSSLSPDDPLSPELAVGQDTQGPHCVVASSPPPRPASHHIHYPSAGRTSSLSNLTTSPQLDVLPQPDDDDPPPLPERTPESFIVASESGEFPLATSDFQLPSRNKNIGTSLEWSGESHSDVFNDTVRLRPCKSMKLRSSRSETNRDRSNSPPPLPERTPESFVLADTASMQPAPRNSTSSLDLRNNASEASSKEPVKCFRRSKSLKILKNMRKSICSPSSLTKPSESAPSNHLSSFLNFGFASRFSKPKGPRNPPPAWNI
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(459067..459339,463163..463271,464081..464157,465079..465174,465585..465623,466100..466171,466261..466320,466737..466879,467359..467425,468295..468372,468961..469053,470510..470586,471448..472172,473063..473173,473318..473448,473983..474010,474417..474497,474814..474917,475572..475602,476328..476405,477239..477303)
location: region:459067-477303:1
so has part: feature:459067-459339:1:exon
so has part: feature:463163-463271:1:exon
so has part: feature:464081-464157:1:exon
so has part: feature:465079-465174:1:exon
so has part: feature:465585-465623:1:exon
so has part: feature:466100-466171:1:exon
so has part: feature:466261-466320:1:exon
so has part: feature:466737-466879:1:exon
so has part: feature:467359-467425:1:exon
so has part: feature:468295-468372:1:exon
so has part: feature:468961-469053:1:exon
so has part: feature:470510-470586:1:exon
so has part: feature:471448-472172:1:exon
so has part: feature:473063-473173:1:exon
so has part: feature:473318-473448:1:exon
so has part: feature:473983-474010:1:exon
so has part: feature:474417-474497:1:exon
so has part: feature:474814-474917:1:exon
so has part: feature:475572-475602:1:exon
so has part: feature:476328-476405:1:exon
so has part: feature:477239-477303:1:exon

XP_040392104.1
type: Protein
SIO_000068: ncbiprotein

position:459067:1
position: 459067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477303:1
position: 477303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459067-459339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463163-463271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464081-464157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465079-465174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465585-465623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466100-466171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:466261-466320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466737-466879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467359-467425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468295-468372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468961-469053:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:470510-470586:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471448-472172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:473063-473173:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:473318-473448:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473983-474010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:474417-474497:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:474814-474917:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:475572-475602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:476328-476405:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:477239-477303:1:exon

PTPN22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PTPN22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 22 isoform X3
translation: MCFVLLFGHDICYVLISFKTCDEVSKPQPAASALWAGAFRYDMHLTCPFLSLAGQSRSVSCNMDQREILLQNLERTQSKKLNQEAFVEEFLKLKRQSTKYRSDKIYPTAASEHPENIKKNRYKDILPFDHSRVELSLITSDADSHYINANFIKGVYGPRAYIATQGPLSTTVIDFWRMIWEYEVLIVIMACMEFEMGKKKCERYWADLGDSSLQCGPFSIACEAEEKKNEYVIRTLKVTLNEEIRTIHQFHYQNWPDHDVPSSIDPILELICEVRCYQPDDSIPICIHCSAGCGRTGVICAIDYTQKLLKDGIVPVNFSIFSLIQEMRTQRPSIVQTKEQYKLVYDAVIELFKRQIKALDAQENSAASQIQTRHPVPKPLLTSVEDIYSLSLLTCSGQEDQNVHQHFSPVVRNEASLASLSAKGEHGSSGGRIPSLRQAISFGTLNFSNSRNAAAAEMWGTREALQKHHSLEFSSRSSGQLLVDLEPQRAGGKGAHGKAPLTRTTSTPFVLEQQGETWACDGGDAKPIFSSQSPNACYSSFQEKQQDGFSPDELNHSSQVAEASPGHRNCGQCPYRYFCSAEDPYFSSLSPDDPLSPELAVGQDTQGPHCVVASSPPPRPASHHIHYPSAGRTSSLNVLPQPDDDDPPPLPERTPESFIVASESGEFPLATSDFQLPSRNKNIGTSLEWSGESHSDVFNDTVRLRPCKSMKLRSSRSETNRDRSNSPPPLPERTPESFVLADTASMQPAPRNSTSSLDLRNNASEASSKEPVKCFRRSKSLKILKNMRKSICSPSSLTKPSESAPSNHLSSFLNFGFASRFSKPKGPRNPPPAWNI
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(459067..459339,463163..463271,464081..464157,465079..465174,465585..465623,466100..466171,466261..466320,466737..466879,467359..467425,468295..468372,468961..469053,470510..470586,471448..472172,473090..473173,473318..473448,473983..474010,474417..474497,474814..474917,475572..475602,476328..476405,477239..477303)
location: region:459067-477303:1
so has part: feature:459067-459339:1:exon
so has part: feature:463163-463271:1:exon
so has part: feature:464081-464157:1:exon
so has part: feature:465079-465174:1:exon
so has part: feature:465585-465623:1:exon
so has part: feature:466100-466171:1:exon
so has part: feature:466261-466320:1:exon
so has part: feature:466737-466879:1:exon
so has part: feature:467359-467425:1:exon
so has part: feature:468295-468372:1:exon
so has part: feature:468961-469053:1:exon
so has part: feature:470510-470586:1:exon
so has part: feature:471448-472172:1:exon
so has part: feature:473090-473173:1:exon
so has part: feature:473318-473448:1:exon
so has part: feature:473983-474010:1:exon
so has part: feature:474417-474497:1:exon
so has part: feature:474814-474917:1:exon
so has part: feature:475572-475602:1:exon
so has part: feature:476328-476405:1:exon
so has part: feature:477239-477303:1:exon

XP_040392105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459067-459339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463163-463271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464081-464157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465079-465174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465585-465623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466100-466171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:466261-466320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466737-466879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467359-467425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468295-468372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468961-469053:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:470510-470586:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471448-472172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:473090-473173:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:473318-473448:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473983-474010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:474417-474497:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:474814-474917:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:475572-475602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:476328-476405:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:477239-477303:1:exon

PTPN22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PTPN22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 22 isoform X1
translation: MCFVLLFGHDICYVLISFKTCDEVSKPQPAASALWAGAFRYDMHLTCPFLSLAGQSRSVSCNMDQREILLQNLERTQSKKLNQEAFVEEFLKLKRQSTKYRSDKIYPTAASEHPENIKKNRYKDILPFDHSRVELSLITSDADSHYINANFIKGVYGPRAYIATQGPLSTTVIDFWRMIWEYEVLIVIMACMEFEMGKKKCERYWADLGDSSLQCGPFSIACEAEEKKNEYVIRTLKVTLNEEIRTIHQFHYQNWPDHDVPSSIDPILELICEVRCYQPDDSIPICIHCSAGCGRTGVICAIDYTQKLLKDGIVPVNFSIFSLIQEMRTQRPSIVQTKEQYKLVYDAVIELFKRQIKALDAQENSAASQIQTRHPVPKPLLTSVEDIYSLSLLTCSGQEDQNVHQHFSPVVRNEASLASLSAKGEHGSSGGRIPSLRQAISFGTLNFSNSRNAAAAEMWGTREALQKHHSLEFSSRSSGQLLVDLEPQRAGGKGAHGKAPLTRTTSTPFVLEQQGETWACDGGDAKPIFSSQSPNACYSSFQEKQQDGFSPDELNHSSQVAEASPGHRNCGQCPYRYFCSAEDPYFSSLSPDDPLSPELAVGQDTQGPHCVVASSPPPRPASHHIHYPSAGRTSSLSNLTTSPQLDVLPQPDDDDPPPLPERTPESFIVASESGEFPLATSDFQLPSRNKNIGTSLEWSGESHSDVFNDTVRLRPCKSMKLRSSRSETNRDRSNSPPPLPERTPESFVLADTASMQPAPRNSTSSLDLRNNASEASSKEPVKCFRRSKSLKILKNMRKSICSPSSLTKPSESAPSNHLSSFLNFGMFFSLHFGIGGTRFLKV
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(459067..459339,463163..463271,464081..464157,465079..465174,465585..465623,466100..466171,466261..466320,466737..466879,467359..467425,468295..468372,468961..469053,470510..470586,471448..472172,473063..473173,473318..473448,473983..474010,474417..474497,474814..474917,475572..475602,476328..476461)
location: region:459067-476461:1
so has part: feature:459067-459339:1:exon
so has part: feature:463163-463271:1:exon
so has part: feature:464081-464157:1:exon
so has part: feature:465079-465174:1:exon
so has part: feature:465585-465623:1:exon
so has part: feature:466100-466171:1:exon
so has part: feature:466261-466320:1:exon
so has part: feature:466737-466879:1:exon
so has part: feature:467359-467425:1:exon
so has part: feature:468295-468372:1:exon
so has part: feature:468961-469053:1:exon
so has part: feature:470510-470586:1:exon
so has part: feature:471448-472172:1:exon
so has part: feature:473063-473173:1:exon
so has part: feature:473318-473448:1:exon
so has part: feature:473983-474010:1:exon
so has part: feature:474417-474497:1:exon
so has part: feature:474814-474917:1:exon
so has part: feature:475572-475602:1:exon
so has part: feature:476328-476461:1:exon

XP_040392103.1
type: Protein
SIO_000068: ncbiprotein

position:476461:1
position: 476461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459067-459339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463163-463271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464081-464157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465079-465174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465585-465623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466100-466171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:466261-466320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466737-466879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467359-467425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468295-468372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468961-469053:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:470510-470586:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471448-472172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:473063-473173:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:473318-473448:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473983-474010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:474417-474497:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:474814-474917:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:475572-475602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:476328-476461:1:exon

RSBN1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RSBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 479195..495090
location: region:479195-495090:1
so has part: feature:479195-495090:1:exon
subclass of: SO_0000010

121059379
type: Gene
SIO_000068: ncbigene

position:479195:1
position: 479195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495090:1
position: 495090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479195-495090:1:exon

RSBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RSBN1
product: round spermatid basic protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536173.1
SIO_010081: RSBN1
subclass of: SO_0000673
so part of: RSBN1
location: join(479195..479636,483656..484326,489418..489555,489994..490136,491000..491167,492120..492228,493674..495090)
location: region:479195-495090:1
so has part: feature:479195-479636:1:exon
so has part: feature:483656-484326:1:exon
so has part: feature:489418-489555:1:exon
so has part: feature:489994-490136:1:exon
so has part: feature:491000-491167:1:exon
so has part: feature:492120-492228:1:exon
so has part: feature:493674-495090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479195-479636:1:exon

position:479636:1
position: 479636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483656-484326:1:exon

position:483656:1
position: 483656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484326:1
position: 484326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:489418-489555:1:exon

position:489418:1
position: 489418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489555:1
position: 489555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:489994-490136:1:exon

position:489994:1
position: 489994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490136:1
position: 490136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:491000-491167:1:exon

position:491000:1
position: 491000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491167:1
position: 491167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:492120-492228:1:exon

position:492120:1
position: 492120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492228:1
position: 492228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:493674-495090:1:exon

position:493674:1
position: 493674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RSBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 9
translation: MAAQVAAVRAVSRAAEETPPLPSGDRPGRPRGAGRRRRGPPGEAAAGGKRARLSQQLLAGPGPAEPLPPAALPGLPAAAGLFAFSPLSLPPPAALEERRRHHHHRHRPAAAAPEPGRLAAGQPQKARRGSPADGAAGRPSKRETQDENGKTQRADSLIMKKIKKKKKKKHREDMRGKRLKMYNKEVQTVCAGLTRIDKETLSQGHCDNLEVNKESFRYLKDEQLCRLNLGMQEYRVPQGVQTPFVTHQEHSVRSSFLKTGTKFSNFIHEEHQSNGGALVLHAYMDELSFLSPVEMERFAEEFLALSFSENDKNAAYYALAIVHGAAAYLPDFLDYFAFNFPNTPVKMEILGKKDIETTTISNFHSQVNRTYCCGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEESPFLRMTLPWGTLSSLRLQCRSQSDDGPIMWVRPGEQMIPTADMPKSPFKRRRSMNEIKNLQYLPRTSEPREVLFEDRTRAHADHVGQGFDWQSTAAVGVLKAVQFGEWSDQPRITKDVVCFHAEDFTDVVQRLQLDLHEPPVSQCVQWVDEAKLNQMRREGIRYARIQLCDNDIYFIPRNVIHQFKTVSAVCSLAWHIRLKQYHPVGETSQSTESDSNLNSSVPGKTESEGESQCVSVKIESEEPGTEMQLTTGVLSSSVSSISGLVQPDQVAQPLPGFKVESNQQHNPQDHTGSSV
SIO_010081: RSBN1
subclass of: SO_0000673
so part of: RSBN1
location: join(479210..479636,483656..484326,489418..489555,489994..490136,491000..491167,492120..492228,493674..494135)
location: region:479210-494135:1
so has part: feature:479210-479636:1:exon
so has part: feature:483656-484326:1:exon
so has part: feature:489418-489555:1:exon
so has part: feature:489994-490136:1:exon
so has part: feature:491000-491167:1:exon
so has part: feature:492120-492228:1:exon
so has part: feature:493674-494135:1:exon

XP_040392107.1
type: Protein
SIO_000068: ncbiprotein

position:479210:1
position: 479210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494135:1
position: 494135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479210-479636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483656-484326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489418-489555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489994-490136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:491000-491167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492120-492228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493674-494135:1:exon

PHTF1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PHTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 498532..510738
location: region:498532-510738:1
so has part: feature:498532-510738:1:exon
subclass of: SO_0000010

121059378
type: Gene
SIO_000068: ncbigene

position:498532:1
position: 498532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510738:1
position: 510738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498532-510738:1:exon

PHTF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHTF1
product: putative homeodomain transcription factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 5 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536172.1
SIO_010081: PHTF1
subclass of: SO_0000673
so part of: PHTF1
location: join(498532..498673,498738..498793,498874..498942,499401..499557,500762..500921,501737..501862,502647..502806,503595..503765,503846..503923,504698..504907,505311..505439,505814..506086,506683..506814,506947..507031,507642..507797,508210..508305,508949..509074,509518..510738)
location: region:498532-510738:1
so has part: feature:498532-498673:1:exon
so has part: feature:498738-498793:1:exon
so has part: feature:498874-498942:1:exon
so has part: feature:499401-499557:1:exon
so has part: feature:500762-500921:1:exon
so has part: feature:501737-501862:1:exon
so has part: feature:502647-502806:1:exon
so has part: feature:503595-503765:1:exon
so has part: feature:503846-503923:1:exon
so has part: feature:504698-504907:1:exon
so has part: feature:505311-505439:1:exon
so has part: feature:505814-506086:1:exon
so has part: feature:506683-506814:1:exon
so has part: feature:506947-507031:1:exon
so has part: feature:507642-507797:1:exon
so has part: feature:508210-508305:1:exon
so has part: feature:508949-509074:1:exon
so has part: feature:509518-510738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:498532-498673:1:exon

position:498673:1
position: 498673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:498738-498793:1:exon

position:498738:1
position: 498738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498793:1
position: 498793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:498874-498942:1:exon

position:498874:1
position: 498874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498942:1
position: 498942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:499401-499557:1:exon

position:499401:1
position: 499401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499557:1
position: 499557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:500762-500921:1:exon

position:500762:1
position: 500762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500921:1
position: 500921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:501737-501862:1:exon

position:501737:1
position: 501737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501862:1
position: 501862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:502647-502806:1:exon

position:502647:1
position: 502647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502806:1
position: 502806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503595-503765:1:exon

position:503595:1
position: 503595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503765:1
position: 503765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:503846-503923:1:exon

position:503846:1
position: 503846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503923:1
position: 503923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:504698-504907:1:exon

position:504698:1
position: 504698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504907:1
position: 504907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:505311-505439:1:exon

position:505311:1
position: 505311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505439:1
position: 505439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:505814-506086:1:exon

position:505814:1
position: 505814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506086:1
position: 506086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:506683-506814:1:exon

position:506683:1
position: 506683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506814:1
position: 506814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:506947-507031:1:exon

position:506947:1
position: 506947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507031:1
position: 507031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:507642-507797:1:exon

position:507642:1
position: 507642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507797:1
position: 507797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:508210-508305:1:exon

position:508210:1
position: 508210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508305:1
position: 508305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:508949-509074:1:exon

position:508949:1
position: 508949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509074:1
position: 509074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:509518-510738:1:exon

position:509518:1
position: 509518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHTF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHTF1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein PHTF1
translation: MGEGHRADRDEGLQKQPKKKGHIQPDLIDVDLIRGSTFAKAKPEIPWXSLTRKGIVRVVFFPLFSQWWIQVTSQXYFMWLLVLYLMQVIAVVLYFMIPVVNASEVMGPMCLMLLMGTVHCQIVSTQISKTSGNNGLSRRRRKLRKSVGVDGNSGSSPEKASKEQQSESASILNSLFGMLFRRRVRRVKMVAEKGTETENGVNAVNNGIKHRHARSEYRLLHLKEKNKLSDAEKSHQDDCTNRDGISDDLSSEEDAEAMAQRILLCQNAEGASSDNSYEEKKRPLVSLNQAVSQVKEALKGARDSDSVVESELESTIYSQDSRSCISVGSRSCSVTRRDSESTRHDSETEDMLWDDLLHGPECRSSCTSDSEEVTVKGTRRDLKENVFQQNHLFWLQNTSPASAKVSALIWEGNDCKKVDMSVLEISGIIMSRVNAYQQGVGYQMLGNIITIGLAFLPFLYRLFRTDNLEQLCSISLKELLHIFCGAPASIPVIVLSAINFLERLCLTWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYLKRRGPQRSVDVXVSSIFLLALSIAFICCAQVLKGHKTFLNAAYNWEFLIWEAALLLFLLRLASLGSETNKKYSNISILLTEQINLYLKMEKKPNKKEQLSLVNNVLKLSTKLLKELDTPFRLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKP
SIO_010081: PHTF1
subclass of: SO_0000673
so part of: PHTF1
location: join(498760..498793,498874..498942,499401..499557,500762..500921,501737..501862,502647..502806,503595..503765,503846..503923,504698..504907,505311..505439,505814..506086,506683..506814,506947..507031,507642..507797,508210..508305,508949..509074,509518..509538)
location: region:498760-509538:1
so has part: feature:498760-498793:1:exon
so has part: feature:498874-498942:1:exon
so has part: feature:499401-499557:1:exon
so has part: feature:500762-500921:1:exon
so has part: feature:501737-501862:1:exon
so has part: feature:502647-502806:1:exon
so has part: feature:503595-503765:1:exon
so has part: feature:503846-503923:1:exon
so has part: feature:504698-504907:1:exon
so has part: feature:505311-505439:1:exon
so has part: feature:505814-506086:1:exon
so has part: feature:506683-506814:1:exon
so has part: feature:506947-507031:1:exon
so has part: feature:507642-507797:1:exon
so has part: feature:508210-508305:1:exon
so has part: feature:508949-509074:1:exon
so has part: feature:509518-509538:1:exon

XP_040392106.1
type: Protein
SIO_000068: ncbiprotein

position:498760:1
position: 498760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509538:1
position: 509538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498760-498793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498874-498942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499401-499557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500762-500921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501737-501862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502647-502806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503595-503765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503846-503923:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:504698-504907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505311-505439:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505814-506086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:506683-506814:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:506947-507031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:507642-507797:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508210-508305:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508949-509074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:509518-509538:1:exon

MAGI3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(511797..584790)
location: region:511797-584790:-1
so has part: feature:511797-584790:-1:exon
subclass of: SO_0000010

121059376
type: Gene
SIO_000068: ncbigene

position:511797:-1
position: 511797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584790:-1
position: 584790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511797-584790:-1:exon

MAGI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MAGI3
product: membrane associated guanylate kinase, WW and PDZ domain containing 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536168.1
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(511797..513989,515432..515565,518365..518508,518989..519121,519233..519335,522942..523127,524929..525114,526319..526512,528980..529071,530242..530395,532449..532480,533493..534101,535521..535710,536499..536593,537541..537598,539715..539794,540624..540798,542070..542279,544400..544519,546405..546521,584407..584790))
location: region:511797-584790:-1
so has part: feature:584407-584790:-1:exon
so has part: feature:546405-546521:-1:exon
so has part: feature:544400-544519:-1:exon
so has part: feature:542070-542279:-1:exon
so has part: feature:540624-540798:-1:exon
so has part: feature:539715-539794:-1:exon
so has part: feature:537541-537598:-1:exon
so has part: feature:536499-536593:-1:exon
so has part: feature:535521-535710:-1:exon
so has part: feature:533493-534101:-1:exon
so has part: feature:532449-532480:-1:exon
so has part: feature:530242-530395:-1:exon
so has part: feature:528980-529071:-1:exon
so has part: feature:526319-526512:-1:exon
so has part: feature:524929-525114:-1:exon
so has part: feature:522942-523127:-1:exon
so has part: feature:519233-519335:-1:exon
so has part: feature:518989-519121:-1:exon
so has part: feature:518365-518508:-1:exon
so has part: feature:515432-515565:-1:exon
so has part: feature:511797-513989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584407-584790:-1:exon

position:584407:-1
position: 584407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546405-546521:-1:exon

position:546405:-1
position: 546405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546521:-1
position: 546521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544400-544519:-1:exon

position:544400:-1
position: 544400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544519:-1
position: 544519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542070-542279:-1:exon

position:542070:-1
position: 542070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542279:-1
position: 542279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:540624-540798:-1:exon

position:540624:-1
position: 540624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540798:-1
position: 540798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539715-539794:-1:exon

position:539715:-1
position: 539715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539794:-1
position: 539794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:537541-537598:-1:exon

position:537541:-1
position: 537541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537598:-1
position: 537598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536499-536593:-1:exon

position:536499:-1
position: 536499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536593:-1
position: 536593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:535521-535710:-1:exon

position:535521:-1
position: 535521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535710:-1
position: 535710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:533493-534101:-1:exon

position:533493:-1
position: 533493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534101:-1
position: 534101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:532449-532480:-1:exon

position:532449:-1
position: 532449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532480:-1
position: 532480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:530242-530395:-1:exon

position:530242:-1
position: 530242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530395:-1
position: 530395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:528980-529071:-1:exon

position:528980:-1
position: 528980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529071:-1
position: 529071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:526319-526512:-1:exon

position:526319:-1
position: 526319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526512:-1
position: 526512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:524929-525114:-1:exon

position:524929:-1
position: 524929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525114:-1
position: 525114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:522942-523127:-1:exon

position:522942:-1
position: 522942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523127:-1
position: 523127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:519233-519335:-1:exon

position:519233:-1
position: 519233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519335:-1
position: 519335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:518989-519121:-1:exon

position:518989:-1
position: 518989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519121:-1
position: 519121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:518365-518508:-1:exon

position:518365:-1
position: 518365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518508:-1
position: 518508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:515432-515565:-1:exon

position:515432:-1
position: 515432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515565:-1
position: 515565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:511797-513989:-1:exon

position:513989:-1
position: 513989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAGI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MAGI3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3
translation: MSKTLRKKRHWLSKVQECVVSWGGAAGPDPELLRGGAERGEFPYLAGRLPPGGEGAPGPALLSGKAPAPGDVLLEVNGTPVSGLTHRDALAVIRHFREPVRLKTVRPGKVINKDLRHYLSLQFQKGSIDHKLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFIPVEQFKALEESGALLESGTYDGNFYGTPKPPAEPSPFQPDPVDQVLFDNDFDTESQRKRTTSVSKMQRMDSSLPEEEEEEEKEAVNGSGGIENKEKHSDSSDWMKPVPSYNQTSSSMDFRNYLSRDETLEPLPKNWEMAYTDTGMIYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDHINQKTQFENPVLEAKRKKQLGQTDVGPSKSGPEKSLFTRDPSQLTGALIRTSLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGNCVLGHTHADVVQMFQLVPVNQYVNMTLCRGYPLPDDNEDPVVDIVTATPIINGPPGTKGDVCLTSQDLIPGTVVLDQNGKTGPMLVNGRLNGPSVDTNEQRISVASSGGSQPELVTIPLVKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDVIKEICHQNVQSLTHLQVVEVLKQFPVGTEVPLLILRGGPPSPTKTGRVKDKQDSSGSLEAINDPIPQPMPFPPAAVRSGSPKLDPSEVYLKSKTIYEDKPPNTRDLDVFLRKQESGFGFRVLGGDGPDQPIYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARTGQVLLTVRRKIFFGGEKQPEEEESQPVVTQDGSPRLNRVEFANQQTPEVYDVRLQRKENEGFGFVILTSKNKPPPGVIPHKIGRVIDGSPADQCGKLKVGDRISAVNGQSIVELSHDSIVQLIKDAGHVVTLTVVAEEEHRGPPSGTNSAKQSPAPQHRPLGSAQMNPSSTDRVATEVEAGKEVSNSYRLSWPEHKHLTQPDAGIASVIGSRHSQVQNSGCFPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPXGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHSDWDSYNPSSSTVIYEEQSPLSSSSHSASPSEVCYLPVPGEALMKVQLSEKLEQAKNTVPEKISTLTENQFEMKPLSSPQRTKNRWDLSSSPGFEITKGSLELGTRRDRSASPKKLGAAEGHHHTGLHSPRKGDPEKSYGNLSHKPDSSRKSESKLTEIGMNGSSKKSXSSGNQGRSASPQKHLSKQGNIEVFCKLQEYPDLTGGDKMTVEQLKGGNGKIGVTTKEGKQKSSGKKEGWSPERKYAAFEESNLPFSDSXRNTSKDEKIRKSNSGELSSSRFKTSSLSNIPLLSMEKQRRLDAQETDILNRRHGERHMELPDETKDDGISKSENSSPVXKTPITPGPWRVPSACKVTNTAGVAEKRV
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(512897..513989,515432..515565,518365..518508,518989..519121,519233..519335,522942..523127,524929..525114,526319..526512,528980..529071,530242..530395,532449..532480,533493..534101,535521..535710,536499..536593,537541..537598,539715..539794,540624..540798,542070..542279,544400..544519,546405..546521,584407..584728))
location: region:512897-584728:-1
so has part: feature:584407-584728:-1:exon
so has part: feature:546405-546521:-1:exon
so has part: feature:544400-544519:-1:exon
so has part: feature:542070-542279:-1:exon
so has part: feature:540624-540798:-1:exon
so has part: feature:539715-539794:-1:exon
so has part: feature:537541-537598:-1:exon
so has part: feature:536499-536593:-1:exon
so has part: feature:535521-535710:-1:exon
so has part: feature:533493-534101:-1:exon
so has part: feature:532449-532480:-1:exon
so has part: feature:530242-530395:-1:exon
so has part: feature:528980-529071:-1:exon
so has part: feature:526319-526512:-1:exon
so has part: feature:524929-525114:-1:exon
so has part: feature:522942-523127:-1:exon
so has part: feature:519233-519335:-1:exon
so has part: feature:518989-519121:-1:exon
so has part: feature:518365-518508:-1:exon
so has part: feature:515432-515565:-1:exon
so has part: feature:512897-513989:-1:exon

XP_040392102.1
type: Protein
SIO_000068: ncbiprotein

position:512897:-1
position: 512897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584728:-1
position: 584728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584407-584728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546405-546521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544400-544519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542070-542279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540624-540798:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539715-539794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537541-537598:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536499-536593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535521-535710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533493-534101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:532449-532480:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:530242-530395:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:528980-529071:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:526319-526512:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:524929-525114:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:522942-523127:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:519233-519335:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:518989-519121:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:518365-518508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:515432-515565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:512897-513989:-1:exon

LOC121059380
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(552655..553733)
location: region:552655-553733:-1
so has part: feature:552655-553733:-1:exon
subclass of: SO_0000011

121059380
type: Gene
SIO_000068: ncbigene

position:552655:-1
position: 552655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553733:-1
position: 553733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552655-553733:-1:exon

LOC121059380
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059380
product: uncharacterized LOC121059380
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005814551.1
SIO_010081: LOC121059380
subclass of: SO_0000673
so part of: LOC121059380
location: complement(join(552655..553176,553476..553733))
location: region:552655-553733:-1
so has part: feature:553476-553733:-1:exon
so has part: feature:552655-553176:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553476-553733:-1:exon

position:553476:-1
position: 553476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552655-553176:-1:exon

position:553176:-1
position: 553176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059192
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(585172..611877)
location: region:585172-611877:-1
so has part: feature:585172-611877:-1:exon
subclass of: SO_0000011

121059192
type: Gene
SIO_000068: ncbigene

position:585172:-1
position: 585172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611877:-1
position: 611877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585172-611877:-1:exon

LOC121059192
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059192
product: uncharacterized LOC121059192
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814455.1
SIO_010081: LOC121059192
subclass of: SO_0000673
so part of: LOC121059192
location: complement(join(585172..587309,597230..597294,598554..598650,611491..611877))
location: region:585172-611877:-1
so has part: feature:611491-611877:-1:exon
so has part: feature:598554-598650:-1:exon
so has part: feature:597230-597294:-1:exon
so has part: feature:585172-587309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:611491-611877:-1:exon

position:611491:-1
position: 611491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598554-598650:-1:exon

position:598554:-1
position: 598554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598650:-1
position: 598650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:597230-597294:-1:exon

position:597230:-1
position: 597230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597294:-1
position: 597294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:585172-587309:-1:exon

position:587309:-1
position: 587309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRIG2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LRIG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613606..637139)
location: region:613606-637139:-1
so has part: feature:613606-637139:-1:exon
subclass of: SO_0000010

121059193
type: Gene
SIO_000068: ncbigene

position:613606:-1
position: 613606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637139:-1
position: 637139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613606-637139:-1:exon

LRIG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LRIG2
product: leucine rich repeats and immunoglobulin like domains 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040535671.1
SIO_010081: LRIG2
subclass of: SO_0000673
so part of: LRIG2
location: complement(join(613606..616992,617620..617901,619244..619393,619881..620330,621136..621417,622356..622676,623728..623891,625322..625390,625526..625597,626414..626494,629375..629518,629762..629905,630593..630736,630860..631003,631530..631664,632155..632229,632708..632779,637018..637139))
location: region:613606-637139:-1
so has part: feature:637018-637139:-1:exon
so has part: feature:632708-632779:-1:exon
so has part: feature:632155-632229:-1:exon
so has part: feature:631530-631664:-1:exon
so has part: feature:630860-631003:-1:exon
so has part: feature:630593-630736:-1:exon
so has part: feature:629762-629905:-1:exon
so has part: feature:629375-629518:-1:exon
so has part: feature:626414-626494:-1:exon
so has part: feature:625526-625597:-1:exon
so has part: feature:625322-625390:-1:exon
so has part: feature:623728-623891:-1:exon
so has part: feature:622356-622676:-1:exon
so has part: feature:621136-621417:-1:exon
so has part: feature:619881-620330:-1:exon
so has part: feature:619244-619393:-1:exon
so has part: feature:617620-617901:-1:exon
so has part: feature:613606-616992:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:637018-637139:-1:exon

position:637018:-1
position: 637018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632708-632779:-1:exon

position:632708:-1
position: 632708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632779:-1
position: 632779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632155-632229:-1:exon

position:632155:-1
position: 632155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632229:-1
position: 632229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:631530-631664:-1:exon

position:631530:-1
position: 631530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631664:-1
position: 631664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:630860-631003:-1:exon

position:630860:-1
position: 630860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631003:-1
position: 631003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:630593-630736:-1:exon

position:630593:-1
position: 630593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630736:-1
position: 630736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:629762-629905:-1:exon

position:629762:-1
position: 629762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629905:-1
position: 629905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:629375-629518:-1:exon

position:629375:-1
position: 629375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629518:-1
position: 629518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:626414-626494:-1:exon

position:626414:-1
position: 626414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626494:-1
position: 626494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:625526-625597:-1:exon

position:625526:-1
position: 625526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625597:-1
position: 625597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:625322-625390:-1:exon

position:625322:-1
position: 625322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625390:-1
position: 625390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:623728-623891:-1:exon

position:623728:-1
position: 623728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623891:-1
position: 623891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:622356-622676:-1:exon

position:622356:-1
position: 622356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622676:-1
position: 622676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:621136-621417:-1:exon

position:621136:-1
position: 621136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621417:-1
position: 621417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:619881-620330:-1:exon

position:619881:-1
position: 619881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620330:-1
position: 620330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:619244-619393:-1:exon

position:619244:-1
position: 619244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619393:-1
position: 619393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:617620-617901:-1:exon

position:617620:-1
position: 617620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617901:-1
position: 617901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:613606-616992:-1:exon

position:616992:-1
position: 616992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRIG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LRIG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeats and immunoglobulin-like domains protein 2
translation: MNYNELSEIPYFGETTSNITLLSLVHNTIPEINAEQLQVYLSLENLDLSSNLISEIKAASFPRMQLKYLNLSNNRITTLEAGCLDNLSSSLIVVKLNRNRISVIPPKIFKLPHVQFLELKRNRIKIVESLTFQGLESLKSLKMQRNGISRLMDGAFFGLNNIEELELEHNNLTEINKGWLYGLRTLQQLQVSQNAINRISPDAWEFCQRLSELDLSYNQLTRLKESAFVGLGLLEKLNLGDNRISHIADGVFRGLTNLQILDLRNNEISWAIEDANEAFAGLSRLDKLILQGNQIKSIMKKAFSGLERLEHLDLSNNAVMSIQENAFAQAQLKELLLNTSSLLCDCQLKWLPQWLTDSHLQQAVNVSCAHPEWLAGQSLLSVDPDDFVCDNFPKPQIRVHPETTIALRGMNVTLTCTAVSSSDSPMSTAWRKDSEVLYDAEVENFARYQQQSGEVVEYTTVLHLFNVNFTDEGRYQCIVTNHFGSNYSNKAKLTVNELPSFLKTPMDLTIRTGAMARLECAAEGHPTPQISWQKDGGTDFPAARERRMHVMPEDDVFFIANVKIEDMGIYSCMAQNTAGGLSANATLTVLETPSFIRPLEDRTVTRGETAVLQCIAGGSPAPRLNWTKDDGPLTVTERHFFAAANQLLIIVDAGLEDAGKYTCIMSNTLGTERGHIYLNVLASPNCDSSQSGIVHEEDGWATVGIVIIVVVCCVVGTSLVWVIVIYHMRRKNEDYSITNTEEMNLPADIPSYLSSQGTLSEPQEGYSNSEAGSHQQLMPPAGSYVHKGTDGGTAPLVICSDCYDNANIYSRTREYCPYAYITEEDPLDQTLPNLMVQMPKETYTARTQHEPSTLDNLLADRDMSVFLTNHDRISEKKISSQHINEPFQLPLWGVNKDLALSHSHFLHQQSARETPRPLRSEGIIDSDREQAASPRPCHRLREHNFDFSRTRNIHDYSKTT
SIO_010081: LRIG2
subclass of: SO_0000673
so part of: LRIG2
location: complement(join(616763..616992,617620..617901,619244..619393,619881..620330,621136..621417,622356..622676,623728..623891,625322..625390,625526..625597,626414..626494,629375..629518,629762..629905,630593..630736,630860..631003,631530..631664,632155..632225))
location: region:616763-632225:-1
so has part: feature:632155-632225:-1:exon
so has part: feature:631530-631664:-1:exon
so has part: feature:630860-631003:-1:exon
so has part: feature:630593-630736:-1:exon
so has part: feature:629762-629905:-1:exon
so has part: feature:629375-629518:-1:exon
so has part: feature:626414-626494:-1:exon
so has part: feature:625526-625597:-1:exon
so has part: feature:625322-625390:-1:exon
so has part: feature:623728-623891:-1:exon
so has part: feature:622356-622676:-1:exon
so has part: feature:621136-621417:-1:exon
so has part: feature:619881-620330:-1:exon
so has part: feature:619244-619393:-1:exon
so has part: feature:617620-617901:-1:exon
so has part: feature:616763-616992:-1:exon

XP_040391605.1
type: Protein
SIO_000068: ncbiprotein

position:616763:-1
position: 616763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632225:-1
position: 632225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632155-632225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631530-631664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630860-631003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630593-630736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:629762-629905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:629375-629518:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:626414-626494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625526-625597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625322-625390:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:623728-623891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622356-622676:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621136-621417:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:619881-620330:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:619244-619393:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:617620-617901:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:616763-616992:-1:exon

SLC16A1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 652338..667782
location: region:652338-667782:1
so has part: feature:652338-667782:1:exon
subclass of: SO_0000010

121059172
type: Gene
SIO_000068: ncbigene

position:652338:1
position: 652338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667782:1
position: 667782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652338-667782:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 198 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040535630.1
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(652338..652475,661722..661979,664296..664439,664974..665834,666162..667782)
location: region:652338-667782:1
so has part: feature:652338-652475:1:exon
so has part: feature:661722-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-667782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:652338-652475:1:exon

position:652475:1
position: 652475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661722-661979:1:exon

position:661722:1
position: 661722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661979:1
position: 661979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:664296-664439:1:exon

position:664296:1
position: 664296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664439:1
position: 664439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:664974-665834:1:exon

position:664974:1
position: 664974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665834:1
position: 665834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666162-667782:1:exon

position:666162:1
position: 666162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 237 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535632.1
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(653336..653464,661722..661979,664296..664439,664974..665834,666162..667782)
location: region:653336-667782:1
so has part: feature:653336-653464:1:exon
so has part: feature:661722-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-667782:1:exon

position:653336:1
position: 653336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653336-653464:1:exon

position:653464:1
position: 653464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661722-661979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666162-667782:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 244 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535628.1
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(653690..654100,661722..661979,664296..664439,664974..665834,666162..667782)
location: region:653690-667782:1
so has part: feature:653690-654100:1:exon
so has part: feature:661722-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-667782:1:exon

position:653690:1
position: 653690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653690-654100:1:exon

position:654100:1
position: 654100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661722-661979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666162-667782:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 197 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040535633.1
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(658106..658124,661722..661979,664296..664439,664974..665834,666162..667782)
location: region:658106-667782:1
so has part: feature:658106-658124:1:exon
so has part: feature:661722-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-667782:1:exon

position:658106:1
position: 658106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658106-658124:1:exon

position:658124:1
position: 658124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661722-661979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666162-667782:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 198 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535631.1
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(660231..660477,661722..661979,664296..664439,664974..665834,666162..667782)
location: region:660231-667782:1
so has part: feature:660231-660477:1:exon
so has part: feature:661722-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-667782:1:exon

position:660231:1
position: 660231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660231-660477:1:exon

position:660477:1
position: 660477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661722-661979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666162-667782:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 202 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535629.1
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(660680..661043,661722..661979,664296..664439,664974..665834,666162..667782)
location: region:660680-667782:1
so has part: feature:660680-661043:1:exon
so has part: feature:661722-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-667782:1:exon

position:660680:1
position: 660680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660680-661043:1:exon

position:661043:1
position: 661043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661722-661979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666162-667782:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLIAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKQIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(661763..661979,664296..664439,664974..665834,666162..666439)
location: region:661763-666439:1
so has part: feature:661763-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-666439:1:exon

XP_040391562.1
type: Protein
SIO_000068: ncbiprotein

position:661763:1
position: 661763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666439:1
position: 666439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661763-661979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666162-666439:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLIAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKQIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(661763..661979,664296..664439,664974..665834,666162..666439)
location: region:661763-666439:1
so has part: feature:661763-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-666439:1:exon

XP_040391563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:661763-661979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666162-666439:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLIAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKQIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(661763..661979,664296..664439,664974..665834,666162..666439)
location: region:661763-666439:1
so has part: feature:661763-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-666439:1:exon

XP_040391564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:661763-661979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666162-666439:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLIAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKQIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(661763..661979,664296..664439,664974..665834,666162..666439)
location: region:661763-666439:1
so has part: feature:661763-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-666439:1:exon

XP_040391565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:661763-661979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666162-666439:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLIAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKQIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(661763..661979,664296..664439,664974..665834,666162..666439)
location: region:661763-666439:1
so has part: feature:661763-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-666439:1:exon

XP_040391566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:661763-661979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666162-666439:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAVGGPVGYTPPEGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIVGGCLSGCGLIAASFCNTVEELYFCVGVVGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQMFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQLKKEAAKEVLQEAGKAKKDDGDTSTDLIGGKAKKEKSTLFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFTPLVFLSNYAKSKQIANESAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAISVIYNGVCHLLAPMSTTYAGFCIYAGFFGFAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGKLNDMYGDYKYTYWACGVILIISGVYLFIGMGINYRLVAKEQKAEEKTRNEGKEEETNIDEAEKQKEANNDVATLPQKSTEDGVKEEESHM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(661763..661979,664296..664439,664974..665834,666162..666439)
location: region:661763-666439:1
so has part: feature:661763-661979:1:exon
so has part: feature:664296-664439:1:exon
so has part: feature:664974-665834:1:exon
so has part: feature:666162-666439:1:exon

XP_040391567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:661763-661979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664296-664439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664974-665834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666162-666439:1:exon

TAFA3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(737385..759724)
location: region:737385-759724:-1
so has part: feature:737385-759724:-1:exon
subclass of: SO_0000010

121059343
type: Gene
SIO_000068: ncbigene

position:737385:-1
position: 737385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759724:-1
position: 759724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737385-759724:-1:exon

TAFA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814497.1
SIO_010081: TAFA3
so part of: TAFA3
location: complement(join(737385..737686,742890..743019,744177..744301,745308..745457,751517..751632,751815..751899,759586..759724))
location: region:737385-759724:-1
so has part: feature:759586-759724:-1:exon
so has part: feature:751815-751899:-1:exon
so has part: feature:751517-751632:-1:exon
so has part: feature:745308-745457:-1:exon
so has part: feature:744177-744301:-1:exon
so has part: feature:742890-743019:-1:exon
so has part: feature:737385-737686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759586-759724:-1:exon

position:759586:-1
position: 759586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751815-751899:-1:exon

position:751815:-1
position: 751815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751899:-1
position: 751899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751517-751632:-1:exon

position:751517:-1
position: 751517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751632:-1
position: 751632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:745308-745457:-1:exon

position:745308:-1
position: 745308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745457:-1
position: 745457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:744177-744301:-1:exon

position:744177:-1
position: 744177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744301:-1
position: 744301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:742890-743019:-1:exon

position:742890:-1
position: 742890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743019:-1
position: 743019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:737385-737686:-1:exon

position:737686:-1
position: 737686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAFA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814496.1
SIO_010081: TAFA3
so part of: TAFA3
location: complement(join(741696..742360,742451..742631,742890..743019,744177..744301,745308..745457,751517..751632,751815..751899,759586..759724))
location: region:741696-759724:-1
so has part: feature:759586-759724:-1:exon
so has part: feature:751815-751899:-1:exon
so has part: feature:751517-751632:-1:exon
so has part: feature:745308-745457:-1:exon
so has part: feature:744177-744301:-1:exon
so has part: feature:742890-743019:-1:exon
so has part: feature:742451-742631:-1:exon
so has part: feature:741696-742360:-1:exon

position:741696:-1
position: 741696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759586-759724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751815-751899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751517-751632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745308-745457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744177-744301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742890-743019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742451-742631:-1:exon

position:742451:-1
position: 742451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742631:-1
position: 742631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:741696-742360:-1:exon

position:742360:-1
position: 742360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAFA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814495.1
SIO_010081: TAFA3
so part of: TAFA3
location: complement(join(741696..742631,742890..743019,744177..744301,745308..745457,751517..751632,751815..751899,759586..759724))
location: region:741696-759724:-1
so has part: feature:759586-759724:-1:exon
so has part: feature:751815-751899:-1:exon
so has part: feature:751517-751632:-1:exon
so has part: feature:745308-745457:-1:exon
so has part: feature:744177-744301:-1:exon
so has part: feature:742890-743019:-1:exon
so has part: feature:741696-742631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759586-759724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751815-751899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751517-751632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745308-745457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744177-744301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742890-743019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741696-742631:-1:exon

TAFA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814494.1
SIO_010081: TAFA3
so part of: TAFA3
location: complement(join(741696..742360,742451..743019,744177..744301,745308..745457,751517..751632,751815..751899,759586..759724))
location: region:741696-759724:-1
so has part: feature:759586-759724:-1:exon
so has part: feature:751815-751899:-1:exon
so has part: feature:751517-751632:-1:exon
so has part: feature:745308-745457:-1:exon
so has part: feature:744177-744301:-1:exon
so has part: feature:742451-743019:-1:exon
so has part: feature:741696-742360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759586-759724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751815-751899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751517-751632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745308-745457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744177-744301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742451-743019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741696-742360:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040536096.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(741696..743019,744177..744301,745308..745457,751517..751632,751815..751899,759586..759724))
location: region:741696-759724:-1
so has part: feature:759586-759724:-1:exon
so has part: feature:751815-751899:-1:exon
so has part: feature:751517-751632:-1:exon
so has part: feature:745308-745457:-1:exon
so has part: feature:744177-744301:-1:exon
so has part: feature:741696-743019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759586-759724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751815-751899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751517-751632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745308-745457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744177-744301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741696-743019:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040536097.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(741696..743019,744177..744301,745308..745457,751517..751632,751815..751899,752036..752139,759586..759630))
location: region:741696-759630:-1
so has part: feature:759586-759630:-1:exon
so has part: feature:752036-752139:-1:exon
so has part: feature:751815-751899:-1:exon
so has part: feature:751517-751632:-1:exon
so has part: feature:745308-745457:-1:exon
so has part: feature:744177-744301:-1:exon
so has part: feature:741696-743019:-1:exon

position:759630:-1
position: 759630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759586-759630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752036-752139:-1:exon

position:752036:-1
position: 752036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752139:-1
position: 752139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751815-751899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751517-751632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745308-745457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744177-744301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741696-743019:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3
translation: MSERDIQSLSKWVLVLTLCLTTLWGRLTLASTHHRSHSVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKVTR
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(743008..743019,744177..744301,745308..745457,751517..751631))
location: region:743008-751631:-1
so has part: feature:751517-751631:-1:exon
so has part: feature:745308-745457:-1:exon
so has part: feature:744177-744301:-1:exon
so has part: feature:743008-743019:-1:exon

XP_040392030.1
type: Protein
SIO_000068: ncbiprotein

position:743008:-1
position: 743008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751631:-1
position: 751631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751517-751631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745308-745457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744177-744301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743008-743019:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3
translation: MSERDIQSLSKWVLVLTLCLTTLWGRLTLASTHHRSHSVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKVTR
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(743008..743019,744177..744301,745308..745457,751517..751631))
location: region:743008-751631:-1
so has part: feature:751517-751631:-1:exon
so has part: feature:745308-745457:-1:exon
so has part: feature:744177-744301:-1:exon
so has part: feature:743008-743019:-1:exon

XP_040392031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751517-751631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745308-745457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744177-744301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743008-743019:-1:exon

LOC121059188
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(761888..763892)
location: region:761888-763892:-1
so has part: feature:761888-763892:-1:exon
subclass of: SO_0000011

121059188
type: Gene
SIO_000068: ncbigene

position:761888:-1
position: 761888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763892:-1
position: 763892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761888-763892:-1:exon

LOC121059188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059188
product: uncharacterized LOC121059188, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814454.1
SIO_010081: LOC121059188
subclass of: SO_0000673
so part of: LOC121059188
location: complement(join(761888..762183,762402..762481,763518..763892))
location: region:761888-763892:-1
so has part: feature:763518-763892:-1:exon
so has part: feature:762402-762481:-1:exon
so has part: feature:761888-762183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:763518-763892:-1:exon

position:763518:-1
position: 763518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:762402-762481:-1:exon

position:762402:-1
position: 762402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762481:-1
position: 762481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761888-762183:-1:exon

position:762183:-1
position: 762183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059188
product: uncharacterized LOC121059188, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814453.1
SIO_010081: LOC121059188
subclass of: SO_0000673
so part of: LOC121059188
location: complement(join(761888..762183,762402..762539,763518..763892))
location: region:761888-763892:-1
so has part: feature:763518-763892:-1:exon
so has part: feature:762402-762539:-1:exon
so has part: feature:761888-762183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:763518-763892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762402-762539:-1:exon

position:762539:-1
position: 762539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761888-762183:-1:exon

PPM1J
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PPM1J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 765157..774984
location: region:765157-774984:1
so has part: feature:765157-774984:1:exon
subclass of: SO_0000010

121059187
type: Gene
SIO_000068: ncbigene

position:765157:1
position: 765157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774984:1
position: 774984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765157-774984:1:exon

PPM1J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PPM1J
product: protein phosphatase, Mg2+/Mn2+ dependent 1J, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040535666.1
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(765157..765323,767409..767535,767935..768258,768700..768812,770312..770396,772146..772264,772438..772501,772727..772834,772999..773150,773448..774984)
location: region:765157-774984:1
so has part: feature:765157-765323:1:exon
so has part: feature:767409-767535:1:exon
so has part: feature:767935-768258:1:exon
so has part: feature:768700-768812:1:exon
so has part: feature:770312-770396:1:exon
so has part: feature:772146-772264:1:exon
so has part: feature:772438-772501:1:exon
so has part: feature:772727-772834:1:exon
so has part: feature:772999-773150:1:exon
so has part: feature:773448-774984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:765157-765323:1:exon

position:765323:1
position: 765323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:767409-767535:1:exon

position:767409:1
position: 767409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767535:1
position: 767535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:767935-768258:1:exon

position:767935:1
position: 767935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768258:1
position: 768258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:768700-768812:1:exon

position:768700:1
position: 768700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768812:1
position: 768812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:770312-770396:1:exon

position:770312:1
position: 770312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770396:1
position: 770396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:772146-772264:1:exon

position:772146:1
position: 772146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772264:1
position: 772264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:772438-772501:1:exon

position:772438:1
position: 772438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772501:1
position: 772501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:772727-772834:1:exon

position:772727:1
position: 772727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772834:1
position: 772834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:772999-773150:1:exon

position:772999:1
position: 772999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773150:1
position: 773150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:773448-774984:1:exon

position:773448:1
position: 773448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPM1J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PPM1J
product: protein phosphatase, Mg2+/Mn2+ dependent 1J, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040535664.1
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(765726..766025,767409..767535,767935..768258,768700..768812,770312..770396,772146..772264,772438..772501,772727..772834,772999..773150,773448..774984)
location: region:765726-774984:1
so has part: feature:765726-766025:1:exon
so has part: feature:767409-767535:1:exon
so has part: feature:767935-768258:1:exon
so has part: feature:768700-768812:1:exon
so has part: feature:770312-770396:1:exon
so has part: feature:772146-772264:1:exon
so has part: feature:772438-772501:1:exon
so has part: feature:772727-772834:1:exon
so has part: feature:772999-773150:1:exon
so has part: feature:773448-774984:1:exon

position:765726:1
position: 765726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765726-766025:1:exon

position:766025:1
position: 766025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:767409-767535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767935-768258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:768700-768812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:770312-770396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772146-772264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772438-772501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:772727-772834:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:772999-773150:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:773448-774984:1:exon

PPM1J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PPM1J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1J isoform X1
translation: MLLRVRSAVAHLVAGLGPGAGAQPPAEPRRGGAGGGGGGGGAAALFCRPAFLQLTPEELRRADDHTGRAVQSPRDGRRRLPWSTGYAEVINAGKSQHNEDQACCEVVFVERRPSPRGHPPSGDGSRELDGGRKGFYFHYWALFDGHAGSGAAVMASRRLHLHICEQLRDLVDILQDPSPPPICLQHDARAGAAELSRAPIKEDNGEVPSDALPRFHLEKAVSHESLVIGAIENAFKHMDDQIEQERASQSIPGGCCALAAVYLMGKFYVANAGDSRAIIIRNGEIIPMSREFTPETERQRLQFLAFLRPELLGKEFTHLEFPRRIQPKELGKKMLYRDQNMNGWAYKKIEEDDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVFSSNIHIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDEEVASVVMEVLTSYEPNDLCRYTMVAQELVVRSRGVLKERGWRLPNDRLGSGDDISVFVIPLGGPGSYT
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(765763..766025,767409..767535,767935..768258,768700..768812,770312..770396,772146..772264,772438..772501,772727..772834,772999..773150,773448..773595)
location: region:765763-773595:1
so has part: feature:765763-766025:1:exon
so has part: feature:767409-767535:1:exon
so has part: feature:767935-768258:1:exon
so has part: feature:768700-768812:1:exon
so has part: feature:770312-770396:1:exon
so has part: feature:772146-772264:1:exon
so has part: feature:772438-772501:1:exon
so has part: feature:772727-772834:1:exon
so has part: feature:772999-773150:1:exon
so has part: feature:773448-773595:1:exon

XP_040391598.1
type: Protein
SIO_000068: ncbiprotein

position:765763:1
position: 765763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773595:1
position: 773595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765763-766025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:767409-767535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767935-768258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:768700-768812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:770312-770396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772146-772264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772438-772501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:772727-772834:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:772999-773150:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:773448-773595:1:exon

PPM1J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PPM1J
product: protein phosphatase, Mg2+/Mn2+ dependent 1J, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040535665.1
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(766047..766442,767409..767535,767935..768258,768700..768812,770312..770396,772146..772264,772438..772501,772727..772834,772999..773150,773448..774984)
location: region:766047-774984:1
so has part: feature:766047-766442:1:exon
so has part: feature:767409-767535:1:exon
so has part: feature:767935-768258:1:exon
so has part: feature:768700-768812:1:exon
so has part: feature:770312-770396:1:exon
so has part: feature:772146-772264:1:exon
so has part: feature:772438-772501:1:exon
so has part: feature:772727-772834:1:exon
so has part: feature:772999-773150:1:exon
so has part: feature:773448-774984:1:exon

position:766047:1
position: 766047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766047-766442:1:exon

position:766442:1
position: 766442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:767409-767535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767935-768258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:768700-768812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:770312-770396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772146-772264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772438-772501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:772727-772834:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:772999-773150:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:773448-774984:1:exon

PPM1J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PPM1J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1J isoform X2
translation: MASRRLHLHICEQLRDLVDILQDPSPPPICLQHDARAGAAELSRAPIKEDNGEVPSDALPRFHLEKAVSHESLVIGAIENAFKHMDDQIEQERASQSIPGGCCALAAVYLMGKFYVANAGDSRAIIIRNGEIIPMSREFTPETERQRLQFLAFLRPELLGKEFTHLEFPRRIQPKELGKKMLYRDQNMNGWAYKKIEEDDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVFSSNIHIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDEEVASVVMEVLTSYEPNDLCRYTMVAQELVVRSRGVLKERGWRLPNDRLGSGDDISVFVIPLGGPGSYT
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(768004..768258,768700..768812,770312..770396,772146..772264,772438..772501,772727..772834,772999..773150,773448..773595)
location: region:768004-773595:1
so has part: feature:768004-768258:1:exon
so has part: feature:768700-768812:1:exon
so has part: feature:770312-770396:1:exon
so has part: feature:772146-772264:1:exon
so has part: feature:772438-772501:1:exon
so has part: feature:772727-772834:1:exon
so has part: feature:772999-773150:1:exon
so has part: feature:773448-773595:1:exon

XP_040391599.1
type: Protein
SIO_000068: ncbiprotein

position:768004:1
position: 768004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768004-768258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768700-768812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770312-770396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772146-772264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772438-772501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772727-772834:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772999-773150:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:773448-773595:1:exon

PPM1J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PPM1J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1J isoform X2
translation: MASRRLHLHICEQLRDLVDILQDPSPPPICLQHDARAGAAELSRAPIKEDNGEVPSDALPRFHLEKAVSHESLVIGAIENAFKHMDDQIEQERASQSIPGGCCALAAVYLMGKFYVANAGDSRAIIIRNGEIIPMSREFTPETERQRLQFLAFLRPELLGKEFTHLEFPRRIQPKELGKKMLYRDQNMNGWAYKKIEEDDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVFSSNIHIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDEEVASVVMEVLTSYEPNDLCRYTMVAQELVVRSRGVLKERGWRLPNDRLGSGDDISVFVIPLGGPGSYT
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(768004..768258,768700..768812,770312..770396,772146..772264,772438..772501,772727..772834,772999..773150,773448..773595)
location: region:768004-773595:1
so has part: feature:768004-768258:1:exon
so has part: feature:768700-768812:1:exon
so has part: feature:770312-770396:1:exon
so has part: feature:772146-772264:1:exon
so has part: feature:772438-772501:1:exon
so has part: feature:772727-772834:1:exon
so has part: feature:772999-773150:1:exon
so has part: feature:773448-773595:1:exon

XP_040391600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:768004-768258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768700-768812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770312-770396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772146-772264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772438-772501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772727-772834:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772999-773150:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:773448-773595:1:exon

RHOC
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 775974..784814
location: region:775974-784814:1
so has part: feature:775974-784814:1:exon
subclass of: SO_0000010

121059190
type: Gene
SIO_000068: ncbigene

position:775974:1
position: 775974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784814:1
position: 784814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775974-784814:1:exon

RHOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RHOC
product: ras homolog family member C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040535670.1
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(775974..775992,782851..783008,783326..783446,783724..783854,784079..784814)
location: region:775974-784814:1
so has part: feature:775974-775992:1:exon
so has part: feature:782851-783008:1:exon
so has part: feature:783326-783446:1:exon
so has part: feature:783724-783854:1:exon
so has part: feature:784079-784814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:775974-775992:1:exon

position:775992:1
position: 775992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782851-783008:1:exon

position:782851:1
position: 782851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783008:1
position: 783008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783326-783446:1:exon

position:783326:1
position: 783326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783446:1
position: 783446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:783724-783854:1:exon

position:783724:1
position: 783724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783854:1
position: 783854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:784079-784814:1:exon

position:784079:1
position: 784079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RHOC
product: ras homolog family member C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535669.1
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(776183..776269,782851..783008,783326..783446,783724..783854,784079..784814)
location: region:776183-784814:1
so has part: feature:776183-776269:1:exon
so has part: feature:782851-783008:1:exon
so has part: feature:783326-783446:1:exon
so has part: feature:783724-783854:1:exon
so has part: feature:784079-784814:1:exon

position:776183:1
position: 776183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776183-776269:1:exon

position:776269:1
position: 776269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782851-783008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783326-783446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783724-783854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:784079-784814:1:exon

RHOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoC
translation: MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCPLL
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(782853..783008,783326..783446,783724..783854,784079..784252)
location: region:782853-784252:1
so has part: feature:782853-783008:1:exon
so has part: feature:783326-783446:1:exon
so has part: feature:783724-783854:1:exon
so has part: feature:784079-784252:1:exon

XP_040391603.1
type: Protein
SIO_000068: ncbiprotein

position:782853:1
position: 782853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784252:1
position: 784252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782853-783008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783326-783446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783724-783854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:784079-784252:1:exon

RHOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoC
translation: MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCPLL
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(782853..783008,783326..783446,783724..783854,784079..784252)
location: region:782853-784252:1
so has part: feature:782853-783008:1:exon
so has part: feature:783326-783446:1:exon
so has part: feature:783724-783854:1:exon
so has part: feature:784079-784252:1:exon

XP_040391604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:782853-783008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783326-783446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783724-783854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:784079-784252:1:exon

MOV10
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(784915..791458)
location: region:784915-791458:-1
so has part: feature:784915-791458:-1:exon
subclass of: SO_0000010

121059189
type: Gene
SIO_000068: ncbigene

position:784915:-1
position: 784915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791458:-1
position: 791458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784915-791458:-1:exon

MOV10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MOV10
product: Mov10 RISC complex RNA helicase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535667.1
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(784915..785343,785417..785538,785627..785715,785853..785978,786084..786158,786242..786433,786513..786636,786867..786969,787047..787166,787256..787353,787539..787642,787734..787895,787982..788129,788227..788403,788544..788698,788808..788961,789077..789199,789440..789680,789761..789999,790092..790222,790369..790465,791237..791458))
location: region:784915-791458:-1
so has part: feature:791237-791458:-1:exon
so has part: feature:790369-790465:-1:exon
so has part: feature:790092-790222:-1:exon
so has part: feature:789761-789999:-1:exon
so has part: feature:789440-789680:-1:exon
so has part: feature:789077-789199:-1:exon
so has part: feature:788808-788961:-1:exon
so has part: feature:788544-788698:-1:exon
so has part: feature:788227-788403:-1:exon
so has part: feature:787982-788129:-1:exon
so has part: feature:787734-787895:-1:exon
so has part: feature:787539-787642:-1:exon
so has part: feature:787256-787353:-1:exon
so has part: feature:787047-787166:-1:exon
so has part: feature:786867-786969:-1:exon
so has part: feature:786513-786636:-1:exon
so has part: feature:786242-786433:-1:exon
so has part: feature:786084-786158:-1:exon
so has part: feature:785853-785978:-1:exon
so has part: feature:785627-785715:-1:exon
so has part: feature:785417-785538:-1:exon
so has part: feature:784915-785343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791237-791458:-1:exon

position:791237:-1
position: 791237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:790369-790465:-1:exon

position:790369:-1
position: 790369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790465:-1
position: 790465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:790092-790222:-1:exon

position:790092:-1
position: 790092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790222:-1
position: 790222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:789761-789999:-1:exon

position:789761:-1
position: 789761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789999:-1
position: 789999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:789440-789680:-1:exon

position:789440:-1
position: 789440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789680:-1
position: 789680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:789077-789199:-1:exon

position:789077:-1
position: 789077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789199:-1
position: 789199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:788808-788961:-1:exon

position:788808:-1
position: 788808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788961:-1
position: 788961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:788544-788698:-1:exon

position:788544:-1
position: 788544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788698:-1
position: 788698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:788227-788403:-1:exon

position:788227:-1
position: 788227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788403:-1
position: 788403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:787982-788129:-1:exon

position:787982:-1
position: 787982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788129:-1
position: 788129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:787734-787895:-1:exon

position:787734:-1
position: 787734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787895:-1
position: 787895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:787539-787642:-1:exon

position:787539:-1
position: 787539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787642:-1
position: 787642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:787256-787353:-1:exon

position:787256:-1
position: 787256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787353:-1
position: 787353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:787047-787166:-1:exon

position:787047:-1
position: 787047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787166:-1
position: 787166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:786867-786969:-1:exon

position:786867:-1
position: 786867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786969:-1
position: 786969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:786513-786636:-1:exon

position:786513:-1
position: 786513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786636:-1
position: 786636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:786242-786433:-1:exon

position:786242:-1
position: 786242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786433:-1
position: 786433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:786084-786158:-1:exon

position:786084:-1
position: 786084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786158:-1
position: 786158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:785853-785978:-1:exon

position:785853:-1
position: 785853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785978:-1
position: 785978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:785627-785715:-1:exon

position:785627:-1
position: 785627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785715:-1
position: 785715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:785417-785538:-1:exon

position:785417:-1
position: 785417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785538:-1
position: 785538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:784915-785343:-1:exon

position:785343:-1
position: 785343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOV10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase MOV-10
translation: MPRFSVAEAKRCGEQFVQFLRDTGREQESRRDALRTIYGGEFRARTDTKMPSFSCILYALRVTHQAQVHGESVHFKKGKKRVVVADQYRRPRTNVETSAPAASGQQPSSGPQVPLSRAKKWAEFIRGKHGVEIVSEHDRANGQIRFDVTLGQPRTVTVQVKNQGAEAVTLRRCQSLRRVREFSFLDEQGATQGQPLLLHPGGTYPIQVRCLTRYNGFFRAVVVFEFTKEPGESFSIGRSVAAIAQSQLAKELGPSSSFEPYQANLQRAVTVITEEGVPPSSSLKNELEKEIPLSTYPYPKSLKETIKLGPKTDPASSWVKMQSLLEAPLQAENYQQKFQLLLHLEEIQMEVDIRRYDMQEVTMVQDRTLLVLDVPGVAENRPSVLRGDHLFVSLSSERDSSPLIQYKGYVHDVELEKVRLGFSSKLMKKFVNQLKFDVTFTFSRLPLQVQHRAAALSMQQGLASLLFPSASCNRSLFTGTYQPRWFDCKLQANEEQCRAVTRIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQVWACFKDARILACAPSNSAADLLCQRLITDIAPRYIYRIMASSRSYREVPAEIRPCCNWDDEQNCYVYPSKEFLGRYRIIITTLVTAGRLASANFSPGYFSHVFIDECGHAVEPESVVAIAGLLTAMDQETNPNGGQLVLAGDPQQLGPVLRSPLATQHGLGTSLLERLMLHNVLYEKSSDGYNPQFVTKLLWNYRSHEAILRIPNELFYDSELKACKGDEFDIRNFYCAWEELPKKGFPIIFHGVCGEDQREAKSPSFFNTAEIEILVQYLKKLLQSQGKRGCPTISPKEIGIISPYRKQVEKIQKAITVHDPVLKALPDIRKLKVGSVEEFQGQERRVILISTVRSCSEYFQLDQTFNLGFLKNPKRLNVAITRAKALLIVVGNPVVLSKDPHWHRFLRYCKEEGGYTGYPYEEETPEEDSLAAHLNSLHLST
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(785424..785538,785627..785715,785853..785978,786084..786158,786242..786433,786513..786636,786867..786969,787047..787166,787256..787353,787539..787642,787734..787895,787982..788129,788227..788403,788544..788698,788808..788961,789077..789199,789440..789680,789761..789999,790092..790222,790369..790465,791237..791370))
location: region:785424-791370:-1
so has part: feature:791237-791370:-1:exon
so has part: feature:790369-790465:-1:exon
so has part: feature:790092-790222:-1:exon
so has part: feature:789761-789999:-1:exon
so has part: feature:789440-789680:-1:exon
so has part: feature:789077-789199:-1:exon
so has part: feature:788808-788961:-1:exon
so has part: feature:788544-788698:-1:exon
so has part: feature:788227-788403:-1:exon
so has part: feature:787982-788129:-1:exon
so has part: feature:787734-787895:-1:exon
so has part: feature:787539-787642:-1:exon
so has part: feature:787256-787353:-1:exon
so has part: feature:787047-787166:-1:exon
so has part: feature:786867-786969:-1:exon
so has part: feature:786513-786636:-1:exon
so has part: feature:786242-786433:-1:exon
so has part: feature:786084-786158:-1:exon
so has part: feature:785853-785978:-1:exon
so has part: feature:785627-785715:-1:exon
so has part: feature:785424-785538:-1:exon

XP_040391601.1
type: Protein
SIO_000068: ncbiprotein

position:785424:-1
position: 785424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791370:-1
position: 791370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791237-791370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790369-790465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790092-790222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789761-789999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:789440-789680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:789077-789199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788808-788961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:788544-788698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:788227-788403:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:787982-788129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:787734-787895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:787539-787642:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:787256-787353:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:787047-787166:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:786867-786969:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:786513-786636:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:786242-786433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:786084-786158:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:785853-785978:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785627-785715:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785424-785538:-1:exon

ST7L
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ST7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 791753..827502
location: region:791753-827502:1
so has part: feature:791753-827502:1:exon
subclass of: SO_0000010

121059418
type: Gene
SIO_000068: ncbigene

position:791753:1
position: 791753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827502:1
position: 827502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791753-827502:1:exon

ST7L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ST7L
product: suppression of tumorigenicity 7 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040536277.1
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(791753..792080,792649..792722,804644..804853,805122..805182,806669..806751,807429..807588,808124..808178,808849..808964,810504..810582,811353..811507,812031..812128,812769..812883,814668..814740,815425..815527,818580..818730,818868..818960,821700..821839,826657..826728,826960..827502)
location: region:791753-827502:1
so has part: feature:791753-792080:1:exon
so has part: feature:792649-792722:1:exon
so has part: feature:804644-804853:1:exon
so has part: feature:805122-805182:1:exon
so has part: feature:806669-806751:1:exon
so has part: feature:807429-807588:1:exon
so has part: feature:808124-808178:1:exon
so has part: feature:808849-808964:1:exon
so has part: feature:810504-810582:1:exon
so has part: feature:811353-811507:1:exon
so has part: feature:812031-812128:1:exon
so has part: feature:812769-812883:1:exon
so has part: feature:814668-814740:1:exon
so has part: feature:815425-815527:1:exon
so has part: feature:818580-818730:1:exon
so has part: feature:818868-818960:1:exon
so has part: feature:821700-821839:1:exon
so has part: feature:826657-826728:1:exon
so has part: feature:826960-827502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791753-792080:1:exon

position:792080:1
position: 792080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:792649-792722:1:exon

position:792649:1
position: 792649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792722:1
position: 792722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:804644-804853:1:exon

position:804644:1
position: 804644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804853:1
position: 804853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:805122-805182:1:exon

position:805122:1
position: 805122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805182:1
position: 805182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:806669-806751:1:exon

position:806669:1
position: 806669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806751:1
position: 806751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:807429-807588:1:exon

position:807429:1
position: 807429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807588:1
position: 807588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:808124-808178:1:exon

position:808124:1
position: 808124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808178:1
position: 808178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:808849-808964:1:exon

position:808849:1
position: 808849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808964:1
position: 808964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:810504-810582:1:exon

position:810504:1
position: 810504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810582:1
position: 810582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:811353-811507:1:exon

position:811353:1
position: 811353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811507:1
position: 811507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:812031-812128:1:exon

position:812031:1
position: 812031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812128:1
position: 812128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:812769-812883:1:exon

position:812769:1
position: 812769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812883:1
position: 812883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:814668-814740:1:exon

position:814668:1
position: 814668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814740:1
position: 814740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:815425-815527:1:exon

position:815425:1
position: 815425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815527:1
position: 815527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:818580-818730:1:exon

position:818580:1
position: 818580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818730:1
position: 818730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:818868-818960:1:exon

position:818868:1
position: 818868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818960:1
position: 818960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:821700-821839:1:exon

position:821700:1
position: 821700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821839:1
position: 821839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:826657-826728:1:exon

position:826657:1
position: 826657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826728:1
position: 826728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:826960-827502:1:exon

position:826960:1
position: 826960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST7L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ST7L
product: suppression of tumorigenicity 7 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040536276.1
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(791753..792080,804644..804853,805122..805182,806669..806751,807429..807588,808124..808178,808849..808964,810504..810582,811353..811507,812031..812128,812769..812883,814668..814740,815425..815527,818580..818730,818868..818960,821700..821839,826657..826728,826960..827502)
location: region:791753-827502:1
so has part: feature:791753-792080:1:exon
so has part: feature:804644-804853:1:exon
so has part: feature:805122-805182:1:exon
so has part: feature:806669-806751:1:exon
so has part: feature:807429-807588:1:exon
so has part: feature:808124-808178:1:exon
so has part: feature:808849-808964:1:exon
so has part: feature:810504-810582:1:exon
so has part: feature:811353-811507:1:exon
so has part: feature:812031-812128:1:exon
so has part: feature:812769-812883:1:exon
so has part: feature:814668-814740:1:exon
so has part: feature:815425-815527:1:exon
so has part: feature:818580-818730:1:exon
so has part: feature:818868-818960:1:exon
so has part: feature:821700-821839:1:exon
so has part: feature:826657-826728:1:exon
so has part: feature:826960-827502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791753-792080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804644-804853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805122-805182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806669-806751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807429-807588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:808124-808178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808849-808964:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810504-810582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:811353-811507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:812031-812128:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:812769-812883:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:814668-814740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:815425-815527:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818580-818730:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:818868-818960:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821700-821839:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:826657-826728:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:826960-827502:1:exon

CAPZA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CAPZA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(794087..805934)
location: region:794087-805934:-1
so has part: feature:794087-805934:-1:exon
subclass of: SO_0000010

121059420
type: Gene
SIO_000068: ncbigene

position:794087:-1
position: 794087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805934:-1
position: 805934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794087-805934:-1:exon

CAPZA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAPZA1
product: capping actin protein of muscle Z-line subunit alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 462 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040536280.1
SIO_010081: CAPZA1
subclass of: SO_0000673
so part of: CAPZA1
location: complement(join(794087..795089,795670..795732,796354..796425,796906..796984,797418..797497,797914..798120,799402..799465,800326..800377,800624..800687,805790..805934))
location: region:794087-805934:-1
so has part: feature:805790-805934:-1:exon
so has part: feature:800624-800687:-1:exon
so has part: feature:800326-800377:-1:exon
so has part: feature:799402-799465:-1:exon
so has part: feature:797914-798120:-1:exon
so has part: feature:797418-797497:-1:exon
so has part: feature:796906-796984:-1:exon
so has part: feature:796354-796425:-1:exon
so has part: feature:795670-795732:-1:exon
so has part: feature:794087-795089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805790-805934:-1:exon

position:805790:-1
position: 805790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:800624-800687:-1:exon

position:800624:-1
position: 800624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800687:-1
position: 800687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800326-800377:-1:exon

position:800326:-1
position: 800326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800377:-1
position: 800377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:799402-799465:-1:exon

position:799402:-1
position: 799402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799465:-1
position: 799465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:797914-798120:-1:exon

position:797914:-1
position: 797914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798120:-1
position: 798120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:797418-797497:-1:exon

position:797418:-1
position: 797418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797497:-1
position: 797497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:796906-796984:-1:exon

position:796906:-1
position: 796906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796984:-1
position: 796984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:796354-796425:-1:exon

position:796354:-1
position: 796354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796425:-1
position: 796425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:795670-795732:-1:exon

position:795670:-1
position: 795670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795732:-1
position: 795732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:794087-795089:-1:exon

position:795089:-1
position: 795089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAPZA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAPZA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-capping protein subunit alpha-1
translation: MADLEERVSDDEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA
SIO_010081: CAPZA1
subclass of: SO_0000673
so part of: CAPZA1
location: complement(join(794949..795089,795670..795732,796354..796425,796906..796984,797418..797497,797914..798120,799402..799465,800326..800377,800624..800687,805790..805828))
location: region:794949-805828:-1
so has part: feature:805790-805828:-1:exon
so has part: feature:800624-800687:-1:exon
so has part: feature:800326-800377:-1:exon
so has part: feature:799402-799465:-1:exon
so has part: feature:797914-798120:-1:exon
so has part: feature:797418-797497:-1:exon
so has part: feature:796906-796984:-1:exon
so has part: feature:796354-796425:-1:exon
so has part: feature:795670-795732:-1:exon
so has part: feature:794949-795089:-1:exon

XP_040392214.1
type: Protein
SIO_000068: ncbiprotein

position:794949:-1
position: 794949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805828:-1
position: 805828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805790-805828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800624-800687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800326-800377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:799402-799465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797914-798120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797418-797497:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:796906-796984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796354-796425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:795670-795732:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:794949-795089:-1:exon

ST7L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ST7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 7 protein-like isoform X2
translation: MPTVTVFLSTLTPKFYFALTVTSSFISGLIFVFEWWHFRKYGTSFIEQVSVSHLRPLIGGVENSPPAPAAFSVGENETNRQNMPECKVWRNPLNLFRGAEYSRYTWVTGKEPLTYYDMNLSAQDHQNFFTCDTDALRPSDTVMQKAWRERNPQARIKAAYQALELNNDCATAYVLLAEEEATTIVDAEKYFKQALKAGEMIYRKSQNCHSQSPQHEAQLRRDTNVLVYVKRRLAMCARKLGRIREAVKMMRDLMKEFPLLSMLNIHENLLEALLELQAYADVQAVLAKYDDISLPKSAAICYTAALLKARAVSERFSPETASKRGLSTAEINAVEAIHRAVEFNPHVPKYLLEMKSLVLPPEHILKRGDSEAVAYAFFHLQHWKRIEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPSCTETADRELLPTFHEVSVYPQKELPFFIHFTAGLCSFSAMLALLTHQFPELMVIFAKAVLRVLWPVSAPSVLASG
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(805173..805182,806669..806751,807429..807588,808124..808178,808849..808964,810504..810582,811353..811507,812031..812128,812769..812883,814668..814740,815425..815527,818580..818730,818868..818960,821700..821839,826657..826710)
location: region:805173-826710:1
so has part: feature:805173-805182:1:exon
so has part: feature:806669-806751:1:exon
so has part: feature:807429-807588:1:exon
so has part: feature:808124-808178:1:exon
so has part: feature:808849-808964:1:exon
so has part: feature:810504-810582:1:exon
so has part: feature:811353-811507:1:exon
so has part: feature:812031-812128:1:exon
so has part: feature:812769-812883:1:exon
so has part: feature:814668-814740:1:exon
so has part: feature:815425-815527:1:exon
so has part: feature:818580-818730:1:exon
so has part: feature:818868-818960:1:exon
so has part: feature:821700-821839:1:exon
so has part: feature:826657-826710:1:exon

XP_040392210.1
type: Protein
SIO_000068: ncbiprotein

position:805173:1
position: 805173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826710:1
position: 826710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805173-805182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806669-806751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807429-807588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808124-808178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808849-808964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810504-810582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811353-811507:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812031-812128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812769-812883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814668-814740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:815425-815527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818580-818730:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818868-818960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:821700-821839:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826657-826710:1:exon

ST7L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ST7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 7 protein-like isoform X2
translation: MPTVTVFLSTLTPKFYFALTVTSSFISGLIFVFEWWHFRKYGTSFIEQVSVSHLRPLIGGVENSPPAPAAFSVGENETNRQNMPECKVWRNPLNLFRGAEYSRYTWVTGKEPLTYYDMNLSAQDHQNFFTCDTDALRPSDTVMQKAWRERNPQARIKAAYQALELNNDCATAYVLLAEEEATTIVDAEKYFKQALKAGEMIYRKSQNCHSQSPQHEAQLRRDTNVLVYVKRRLAMCARKLGRIREAVKMMRDLMKEFPLLSMLNIHENLLEALLELQAYADVQAVLAKYDDISLPKSAAICYTAALLKARAVSERFSPETASKRGLSTAEINAVEAIHRAVEFNPHVPKYLLEMKSLVLPPEHILKRGDSEAVAYAFFHLQHWKRIEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPSCTETADRELLPTFHEVSVYPQKELPFFIHFTAGLCSFSAMLALLTHQFPELMVIFAKAVLRVLWPVSAPSVLASG
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(805173..805182,806669..806751,807429..807588,808124..808178,808849..808964,810504..810582,811353..811507,812031..812128,812769..812883,814668..814740,815425..815527,818580..818730,818868..818960,821700..821839,826657..826710)
location: region:805173-826710:1
so has part: feature:805173-805182:1:exon
so has part: feature:806669-806751:1:exon
so has part: feature:807429-807588:1:exon
so has part: feature:808124-808178:1:exon
so has part: feature:808849-808964:1:exon
so has part: feature:810504-810582:1:exon
so has part: feature:811353-811507:1:exon
so has part: feature:812031-812128:1:exon
so has part: feature:812769-812883:1:exon
so has part: feature:814668-814740:1:exon
so has part: feature:815425-815527:1:exon
so has part: feature:818580-818730:1:exon
so has part: feature:818868-818960:1:exon
so has part: feature:821700-821839:1:exon
so has part: feature:826657-826710:1:exon

XP_040392211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:805173-805182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806669-806751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807429-807588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808124-808178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808849-808964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810504-810582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811353-811507:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812031-812128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812769-812883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814668-814740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:815425-815527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818580-818730:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818868-818960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:821700-821839:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826657-826710:1:exon

ST7L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ST7L
product: suppression of tumorigenicity 7 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 80 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040536275.1
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(806166..806397,806669..806751,807429..807588,808124..808178,808849..808964,810504..810582,811353..811507,812031..812128,812769..812883,814668..814740,815425..815527,818580..818730,818868..818960,821700..821841,826659..826728,826960..827502)
location: region:806166-827502:1
so has part: feature:806166-806397:1:exon
so has part: feature:806669-806751:1:exon
so has part: feature:807429-807588:1:exon
so has part: feature:808124-808178:1:exon
so has part: feature:808849-808964:1:exon
so has part: feature:810504-810582:1:exon
so has part: feature:811353-811507:1:exon
so has part: feature:812031-812128:1:exon
so has part: feature:812769-812883:1:exon
so has part: feature:814668-814740:1:exon
so has part: feature:815425-815527:1:exon
so has part: feature:818580-818730:1:exon
so has part: feature:818868-818960:1:exon
so has part: feature:821700-821841:1:exon
so has part: feature:826659-826728:1:exon
so has part: feature:826960-827502:1:exon

position:806166:1
position: 806166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806166-806397:1:exon

position:806397:1
position: 806397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:806669-806751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807429-807588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808124-808178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808849-808964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810504-810582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811353-811507:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812031-812128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812769-812883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814668-814740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:815425-815527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818580-818730:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818868-818960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:821700-821841:1:exon

position:821841:1
position: 821841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:826659-826728:1:exon

position:826659:1
position: 826659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:826960-827502:1:exon

ST7L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ST7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 7 protein-like isoform X1
translation: MADGSGTGTATGSGRGPPCPGAAAALRRWEQLRRRAAAAAPWARGLLAVAAGLGLCYAVLRVPLRLRDGLAAVTVFLSTLTPKFYFALTVTSSFISGLIFVFEWWHFRKYGTSFIEQVSVSHLRPLIGGVENSPPAPAAFSVGENETNRQNMPECKVWRNPLNLFRGAEYSRYTWVTGKEPLTYYDMNLSAQDHQNFFTCDTDALRPSDTVMQKAWRERNPQARIKAAYQALELNNDCATAYVLLAEEEATTIVDAEKYFKQALKAGEMIYRKSQNCHSQSPQHEAQLRRDTNVLVYVKRRLAMCARKLGRIREAVKMMRDLMKEFPLLSMLNIHENLLEALLELQAYADVQAVLAKYDDISLPKSAAICYTAALLKARAVSERFSPETASKRGLSTAEINAVEAIHRAVEFNPHVPKYLLEMKSLVLPPEHILKRGDSEAVAYAFFHLQHWKRIEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPSCTETADRELLPTFHEVSVYPQKELPFFIHFTAGLCSFSAMLALLTHQFPELMVIFAKAVLRVLWPVSAPSVLASG
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(806181..806397,806669..806751,807429..807588,808124..808178,808849..808964,810504..810582,811353..811507,812031..812128,812769..812883,814668..814740,815425..815527,818580..818730,818868..818960,821700..821841,826659..826710)
location: region:806181-826710:1
so has part: feature:806181-806397:1:exon
so has part: feature:806669-806751:1:exon
so has part: feature:807429-807588:1:exon
so has part: feature:808124-808178:1:exon
so has part: feature:808849-808964:1:exon
so has part: feature:810504-810582:1:exon
so has part: feature:811353-811507:1:exon
so has part: feature:812031-812128:1:exon
so has part: feature:812769-812883:1:exon
so has part: feature:814668-814740:1:exon
so has part: feature:815425-815527:1:exon
so has part: feature:818580-818730:1:exon
so has part: feature:818868-818960:1:exon
so has part: feature:821700-821841:1:exon
so has part: feature:826659-826710:1:exon

XP_040392209.1
type: Protein
SIO_000068: ncbiprotein

position:806181:1
position: 806181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806181-806397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806669-806751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807429-807588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808124-808178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808849-808964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810504-810582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811353-811507:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812031-812128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812769-812883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814668-814740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:815425-815527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:818580-818730:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:818868-818960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:821700-821841:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:826659-826710:1:exon

WNT2B
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: WNT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(835705..853009)
location: region:835705-853009:-1
so has part: feature:835705-853009:-1:exon
subclass of: SO_0000010

121059419
type: Gene
SIO_000068: ncbigene

position:835705:-1
position: 835705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853009:-1
position: 853009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835705-853009:-1:exon

WNT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: WNT2B
product: Wnt family member 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040536278.1
SIO_010081: WNT2B
subclass of: SO_0000673
so part of: WNT2B
location: complement(join(835705..836776,837766..838030,838498..838775,841133..841353,852407..853009))
location: region:835705-853009:-1
so has part: feature:852407-853009:-1:exon
so has part: feature:841133-841353:-1:exon
so has part: feature:838498-838775:-1:exon
so has part: feature:837766-838030:-1:exon
so has part: feature:835705-836776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852407-853009:-1:exon

position:852407:-1
position: 852407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841133-841353:-1:exon

position:841133:-1
position: 841133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841353:-1
position: 841353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:838498-838775:-1:exon

position:838498:-1
position: 838498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838775:-1
position: 838775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:837766-838030:-1:exon

position:837766:-1
position: 837766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838030:-1
position: 838030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:835705-836776:-1:exon

position:836776:-1
position: 836776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: WNT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-2b
translation: MLSTNRLEAPPGIAVAPGRAECGAFPRTAGAAPRIYLPFVLILLALPPRADSSWWYIGALGARVICDNIPGLVNKQRQLCQRYPDIMQSVGEGAKEWIRECQHQFRHHRWNCSTLDRDHTVFGRVMLRSSREAAFVYAISSAGVVYAITRACSQGDLKACGCDPLKRGRAKDERGEFDWGGCSDNINYGIRFAKAFVDAKEKKVKDARALMNLHNNRCGRMAVKRFLKLECKCHGVSGSCTLRTCWLAMSDFRKTGDYLRKKYNGAIQVIMNQDGTGFTVANKNFRKPTKTDLVYFENSPDYCVMDKSAGSLGTAGRVCNKMSRGTDGCEVMCCGRGYDTTRVTRVTKCECKFHWCCAVRCKECEDTVDVHTCKAPKRAEWLDQT
SIO_010081: WNT2B
subclass of: SO_0000673
so part of: WNT2B
location: complement(join(836547..836776,837766..838030,838498..838775,841133..841353,852407..852570))
location: region:836547-852570:-1
so has part: feature:852407-852570:-1:exon
so has part: feature:841133-841353:-1:exon
so has part: feature:838498-838775:-1:exon
so has part: feature:837766-838030:-1:exon
so has part: feature:836547-836776:-1:exon

XP_040392212.1
type: Protein
SIO_000068: ncbiprotein

position:836547:-1
position: 836547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852570:-1
position: 852570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852407-852570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841133-841353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838498-838775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837766-838030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836547-836776:-1:exon

LOC121059423
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 852331..873150
location: region:852331-873150:1
so has part: feature:852331-873150:1:exon
subclass of: SO_0000011

121059423
type: Gene
SIO_000068: ncbigene

position:852331:1
position: 852331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873150:1
position: 873150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852331-873150:1:exon

LOC121059423
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059423
product: uncharacterized LOC121059423
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814568.1
SIO_010081: LOC121059423
subclass of: SO_0000673
so part of: LOC121059423
location: join(852331..852462,857724..857910,864002..864119,871571..871675,873042..873150)
location: region:852331-873150:1
so has part: feature:852331-852462:1:exon
so has part: feature:857724-857910:1:exon
so has part: feature:864002-864119:1:exon
so has part: feature:871571-871675:1:exon
so has part: feature:873042-873150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852331-852462:1:exon

position:852462:1
position: 852462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857724-857910:1:exon

position:857724:1
position: 857724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857910:1
position: 857910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864002-864119:1:exon

position:864002:1
position: 864002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864119:1
position: 864119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:871571-871675:1:exon

position:871571:1
position: 871571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871675:1
position: 871675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:873042-873150:1:exon

position:873042:1
position: 873042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121059422
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 873462..875369
location: region:873462-875369:1
so has part: feature:873462-875369:1:exon
subclass of: SO_0000011

121059422
type: Gene
SIO_000068: ncbigene

position:873462:1
position: 873462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875369:1
position: 875369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873462-875369:1:exon

LOC121059422
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059422
product: uncharacterized LOC121059422
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814567.1
SIO_010081: LOC121059422
subclass of: SO_0000673
so part of: LOC121059422
location: join(873462..874285,874984..875369)
location: region:873462-875369:1
so has part: feature:873462-874285:1:exon
so has part: feature:874984-875369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:873462-874285:1:exon

position:874285:1
position: 874285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:874984-875369:1:exon

position:874984:1
position: 874984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121059421
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(877295..885733)
location: region:877295-885733:-1
so has part: feature:877295-885733:-1:exon
subclass of: SO_0000011

121059421
type: Gene
SIO_000068: ncbigene

position:877295:-1
position: 877295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885733:-1
position: 885733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877295-885733:-1:exon

LOC121059421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059421
product: uncharacterized LOC121059421, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814566.1
SIO_010081: LOC121059421
subclass of: SO_0000673
so part of: LOC121059421
location: complement(join(877295..879353,879439..879513,883243..883467,884058..884246,884638..884765))
location: region:877295-884765:-1
so has part: feature:884638-884765:-1:exon
so has part: feature:884058-884246:-1:exon
so has part: feature:883243-883467:-1:exon
so has part: feature:879439-879513:-1:exon
so has part: feature:877295-879353:-1:exon

position:884765:-1
position: 884765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884638-884765:-1:exon

position:884638:-1
position: 884638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884058-884246:-1:exon

position:884058:-1
position: 884058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884246:-1
position: 884246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:883243-883467:-1:exon

position:883243:-1
position: 883243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883467:-1
position: 883467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:879439-879513:-1:exon

position:879439:-1
position: 879439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879513:-1
position: 879513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:877295-879353:-1:exon

position:879353:-1
position: 879353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059421
product: uncharacterized LOC121059421, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005814564.1
SIO_010081: LOC121059421
subclass of: SO_0000673
so part of: LOC121059421
location: complement(join(877298..879353,879439..881367,883243..883467,884072..884246,884638..884765))
location: region:877298-884765:-1
so has part: feature:884638-884765:-1:exon
so has part: feature:884072-884246:-1:exon
so has part: feature:883243-883467:-1:exon
so has part: feature:879439-881367:-1:exon
so has part: feature:877298-879353:-1:exon

position:877298:-1
position: 877298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884638-884765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884072-884246:-1:exon

position:884072:-1
position: 884072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:883243-883467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879439-881367:-1:exon

position:881367:-1
position: 881367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:877298-879353:-1:exon

LOC121059421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059421
product: uncharacterized LOC121059421, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814563.1
SIO_010081: LOC121059421
subclass of: SO_0000673
so part of: LOC121059421
location: complement(join(877299..879353,879439..881367,883243..883467,884058..884246,885470..885733))
location: region:877299-885733:-1
so has part: feature:885470-885733:-1:exon
so has part: feature:884058-884246:-1:exon
so has part: feature:883243-883467:-1:exon
so has part: feature:879439-881367:-1:exon
so has part: feature:877299-879353:-1:exon

position:877299:-1
position: 877299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885470-885733:-1:exon

position:885470:-1
position: 885470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884058-884246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883243-883467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879439-881367:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877299-879353:-1:exon

LOC121059421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059421
product: uncharacterized LOC121059421, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814565.1
SIO_010081: LOC121059421
subclass of: SO_0000673
so part of: LOC121059421
location: complement(join(877299..879353,879439..881367,883243..883467,884058..884246,884783..884895))
location: region:877299-884895:-1
so has part: feature:884783-884895:-1:exon
so has part: feature:884058-884246:-1:exon
so has part: feature:883243-883467:-1:exon
so has part: feature:879439-881367:-1:exon
so has part: feature:877299-879353:-1:exon

position:884895:-1
position: 884895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884783-884895:-1:exon

position:884783:-1
position: 884783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884058-884246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883243-883467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879439-881367:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877299-879353:-1:exon

LOC121059421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059421
product: uncharacterized LOC121059421, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814562.1
SIO_010081: LOC121059421
subclass of: SO_0000673
so part of: LOC121059421
location: complement(join(877299..879353,879439..881359,883243..883467,884058..884246,884638..884765))
location: region:877299-884765:-1
so has part: feature:884638-884765:-1:exon
so has part: feature:884058-884246:-1:exon
so has part: feature:883243-883467:-1:exon
so has part: feature:879439-881359:-1:exon
so has part: feature:877299-879353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:884638-884765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884058-884246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883243-883467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879439-881359:-1:exon

position:881359:-1
position: 881359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:877299-879353:-1:exon

LOC121059421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059421
product: uncharacterized LOC121059421, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814561.1
SIO_010081: LOC121059421
subclass of: SO_0000673
so part of: LOC121059421
location: complement(join(877299..879353,879439..881367,883243..883467,884058..884246,884638..884765))
location: region:877299-884765:-1
so has part: feature:884638-884765:-1:exon
so has part: feature:884058-884246:-1:exon
so has part: feature:883243-883467:-1:exon
so has part: feature:879439-881367:-1:exon
so has part: feature:877299-879353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:884638-884765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884058-884246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883243-883467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879439-881367:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877299-879353:-1:exon

CTTNBP2NL
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(887012..908244)
location: region:887012-908244:-1
so has part: feature:887012-908244:-1:exon
subclass of: SO_0000010

121059417
type: Gene
SIO_000068: ncbigene

position:887012:-1
position: 887012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908244:-1
position: 908244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887012-908244:-1:exon

CTTNBP2NL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CTTNBP2NL
product: CTTNBP2 N-terminal like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040536272.1
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(887012..891099,891940..892047,894216..894446,904405..904512,908198..908244))
location: region:887012-908244:-1
so has part: feature:908198-908244:-1:exon
so has part: feature:904405-904512:-1:exon
so has part: feature:894216-894446:-1:exon
so has part: feature:891940-892047:-1:exon
so has part: feature:887012-891099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:908198-908244:-1:exon

position:908198:-1
position: 908198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904405-904512:-1:exon

position:904405:-1
position: 904405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904512:-1
position: 904512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:894216-894446:-1:exon

position:894216:-1
position: 894216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894446:-1
position: 894446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891940-892047:-1:exon

position:891940:-1
position: 891940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892047:-1
position: 892047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:887012-891099:-1:exon