Cygnus olor isolate bCygOlo1 chromosome 23, bCygOlo1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Cygnus olor isolate bCygOlo1 chromosome 23, bCygOlo1.pri.v2, whole genome shotgun sequence.
sequence version: NC_049191.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_049191.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA642912
dblink: SAMN12621369
keyword: WGS
keyword: RefSeq
source: Cygnus olor (mute swan)
organism: Cygnus olor
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020087.2.\nAssembly name: bCygOlo1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/31. The original whole-genome shotgun project has the\naccession WNMI00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v. 1.0.3+\n 1.Nov.2018; scaff10x v. 4.1.0; Bionano\n solve v. 3.2.1_04122018; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2020-11-30; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bCygOlo1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.23x\nSequencing Technology :: PacBio Sequel 1 CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cygnus olor Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7742836
topology: linear
so has quality: SO_0000987
location: 1..7742836
location: region:1-7742836:1
RO_0002162: 8869

NC_049191
type: RefSeq
SIO_000068: refseq

PRJNA642912
type: BioProject
SIO_000068: bioproject

SAMN12621369
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7742836:1
position: 7742836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7742836:1:source
so part of: sequence
organism: Cygnus olor
mol type: genomic DNA
isolate: bCygOlo1
chromosome: 23
sex: male
tissue type: muscle
dev stage: adult
country: Germany: Mainau
lat lon: 50.149850 N 11.063270 E
collection date: 2015-07-01
collected by: Robert Kraus

8869
type: Taxonomy
SIO_000068: taxonomy

MTFR1L
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36467..48547)
location: region:36467-48547:-1
so has part: feature:36467-48547:-1:exon
subclass of: SO_0000010

121058927
type: Gene
SIO_000068: ncbigene

position:36467:-1
position: 36467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48547:-1
position: 48547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36467-48547:-1:exon

MTFR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MTFR1L
product: mitochondrial fission regulator 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 115 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535092.1
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: complement(join(36467..37229,41281..41593,44385..44596,45685..45794,46492..46596,48115..48241,48448..48547))
location: region:36467-48547:-1
so has part: feature:48448-48547:-1:exon
so has part: feature:48115-48241:-1:exon
so has part: feature:46492-46596:-1:exon
so has part: feature:45685-45794:-1:exon
so has part: feature:44385-44596:-1:exon
so has part: feature:41281-41593:-1:exon
so has part: feature:36467-37229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48448-48547:-1:exon

position:48448:-1
position: 48448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48115-48241:-1:exon

position:48115:-1
position: 48115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48241:-1
position: 48241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46492-46596:-1:exon

position:46492:-1
position: 46492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46596:-1
position: 46596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45685-45794:-1:exon

position:45685:-1
position: 45685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45794:-1
position: 45794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44385-44596:-1:exon

position:44385:-1
position: 44385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44596:-1
position: 44596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41281-41593:-1:exon

position:41281:-1
position: 41281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41593:-1
position: 41593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:36467-37229:-1:exon

position:37229:-1
position: 37229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTFR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission regulator 1-like
translation: MAADSTIPIWQNKPHGSTRSVVRRIGSNLPLKPCPRATFEVLPNVSELYLNDVPPVPTLADIGWIAADDEETYARVRSDTRPLKHKWKPSPFTVIQRNASVPNLRKQGEKLLALKKPGLPALSRTTELQDELSHLRSQIAKIVAAGSASPSFTPDVLSPGSSNASSPLPCFGPSFQSTTSFVISDITEEEAELETPELPSVSMLCSATSECCKAEPKDPDEEDSVSLSKASSFADMMGILKDIHRMKQSKDLNRTSVKEEDPAVLIAEVLRRKFALKDEDLTMKGK
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: complement(join(37124..37229,41281..41593,44385..44596,45685..45794,46492..46596,48115..48129))
location: region:37124-48129:-1
so has part: feature:48115-48129:-1:exon
so has part: feature:46492-46596:-1:exon
so has part: feature:45685-45794:-1:exon
so has part: feature:44385-44596:-1:exon
so has part: feature:41281-41593:-1:exon
so has part: feature:37124-37229:-1:exon

XP_040391026.1
type: Protein
SIO_000068: ncbiprotein

position:37124:-1
position: 37124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48129:-1
position: 48129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48115-48129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46492-46596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45685-45794:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44385-44596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41281-41593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37124-37229:-1:exon

LOC121058928
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 44610..50549
location: region:44610-50549:1
so has part: feature:44610-50549:1:exon
subclass of: SO_0000011

121058928
type: Gene
SIO_000068: ncbigene

position:44610:1
position: 44610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50549:1
position: 50549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44610-50549:1:exon

LOC121058928
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058928
product: uncharacterized LOC121058928
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005814392.1
SIO_010081: LOC121058928
subclass of: SO_0000673
so part of: LOC121058928
location: join(44610..45216,50395..50549)
location: region:44610-50549:1
so has part: feature:44610-45216:1:exon
so has part: feature:50395-50549:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44610-45216:1:exon

position:45216:1
position: 45216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50395-50549:1:exon

position:50395:1
position: 50395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SELENON
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(48621..67856)
location: region:48621-67856:-1
so has part: feature:48621-67856:-1:exon
subclass of: SO_0000010

121058925
type: Gene
SIO_000068: ncbigene

position:48621:-1
position: 48621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67856:-1
position: 67856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48621-67856:-1:exon

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SELENON
product: selenoprotein N, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 804 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535081.1
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(48621..51841,53041..53142,53819..53931,54773..54878,56161..56349,57315..57396,58954..59091,59898..60022,60825..61037,61508..61638,62449..62566,67590..67856))
location: region:48621-67856:-1
so has part: feature:67590-67856:-1:exon
so has part: feature:62449-62566:-1:exon
so has part: feature:61508-61638:-1:exon
so has part: feature:60825-61037:-1:exon
so has part: feature:59898-60022:-1:exon
so has part: feature:58954-59091:-1:exon
so has part: feature:57315-57396:-1:exon
so has part: feature:56161-56349:-1:exon
so has part: feature:54773-54878:-1:exon
so has part: feature:53819-53931:-1:exon
so has part: feature:53041-53142:-1:exon
so has part: feature:48621-51841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67590-67856:-1:exon

position:67590:-1
position: 67590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62449-62566:-1:exon

position:62449:-1
position: 62449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62566:-1
position: 62566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61508-61638:-1:exon

position:61508:-1
position: 61508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61638:-1
position: 61638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60825-61037:-1:exon

position:60825:-1
position: 60825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61037:-1
position: 61037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59898-60022:-1:exon

position:59898:-1
position: 59898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60022:-1
position: 60022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:58954-59091:-1:exon

position:58954:-1
position: 58954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59091:-1
position: 59091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57315-57396:-1:exon

position:57315:-1
position: 57315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57396:-1
position: 57396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:56161-56349:-1:exon

position:56161:-1
position: 56161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56349:-1
position: 56349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:54773-54878:-1:exon

position:54773:-1
position: 54773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54878:-1
position: 54878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:53819-53931:-1:exon

position:53819:-1
position: 53819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53931:-1
position: 53931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:53041-53142:-1:exon

position:53041:-1
position: 53041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53142:-1
position: 53142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:48621-51841:-1:exon

position:51841:-1
position: 51841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SELENON
product: selenoprotein N, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 115 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535082.1
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(48621..51841,53041..53142,53819..53931,54773..54878,56161..56349,57315..57396,58954..59091,59898..60022,60825..61037,61550..61638,62449..62566,67590..67776))
location: region:48621-67776:-1
so has part: feature:67590-67776:-1:exon
so has part: feature:62449-62566:-1:exon
so has part: feature:61550-61638:-1:exon
so has part: feature:60825-61037:-1:exon
so has part: feature:59898-60022:-1:exon
so has part: feature:58954-59091:-1:exon
so has part: feature:57315-57396:-1:exon
so has part: feature:56161-56349:-1:exon
so has part: feature:54773-54878:-1:exon
so has part: feature:53819-53931:-1:exon
so has part: feature:53041-53142:-1:exon
so has part: feature:48621-51841:-1:exon

position:67776:-1
position: 67776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67590-67776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62449-62566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61550-61638:-1:exon

position:61550:-1
position: 61550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60825-61037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59898-60022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58954-59091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57315-57396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56161-56349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54773-54878:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53819-53931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53041-53142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48621-51841:-1:exon

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SELENON
product: selenoprotein N, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 126 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040535083.1
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(48621..51841,53041..53142,56161..56349,57315..57396,58954..59091,59898..60022,60825..61037,61508..61638,62449..62566,67590..67759))
location: region:48621-67759:-1
so has part: feature:67590-67759:-1:exon
so has part: feature:62449-62566:-1:exon
so has part: feature:61508-61638:-1:exon
so has part: feature:60825-61037:-1:exon
so has part: feature:59898-60022:-1:exon
so has part: feature:58954-59091:-1:exon
so has part: feature:57315-57396:-1:exon
so has part: feature:56161-56349:-1:exon
so has part: feature:53041-53142:-1:exon
so has part: feature:48621-51841:-1:exon

position:67759:-1
position: 67759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67590-67759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62449-62566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61508-61638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60825-61037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59898-60022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58954-59091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57315-57396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56161-56349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53041-53142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:48621-51841:-1:exon

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SELENON
product: selenoprotein N, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040535084.1
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(48621..51841,53041..53142,56161..56349,57315..57396,58954..59091,59898..60022,60825..61037,61550..61638,62449..62566,67590..67753))
location: region:48621-67753:-1
so has part: feature:67590-67753:-1:exon
so has part: feature:62449-62566:-1:exon
so has part: feature:61550-61638:-1:exon
so has part: feature:60825-61037:-1:exon
so has part: feature:59898-60022:-1:exon
so has part: feature:58954-59091:-1:exon
so has part: feature:57315-57396:-1:exon
so has part: feature:56161-56349:-1:exon
so has part: feature:53041-53142:-1:exon
so has part: feature:48621-51841:-1:exon

position:67753:-1
position: 67753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67590-67753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62449-62566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61550-61638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60825-61037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59898-60022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58954-59091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57315-57396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56161-56349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53041-53142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:48621-51841:-1:exon

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenoprotein N isoform X4
translation: MAGPGAVSSRLALALAALAALAAVKYYRDAEAARQQELALKSLGSEGLFLFSSLDTNNDLYLSPEEFKPIAEKLTGVTPVSEFEEEETPDPTGETLSIVAKFQPLISHVALSGLRNWTAPAAHMSVMLAKQFKAFLPPKNKLDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKEITIHRLLSMFHPRPFVKTRFAPQGSVACIQAISTFYYAIAFRIHAEFQLNEPPNFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEVAAQKLEVAMYPFKKTNRENEFYSKLADLHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMKPEDVESSVFSFSNNFDDPSTATYLQFLKEGLQRAKSYVQT
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(51671..51841,53041..53142,56161..56349,57315..57396,58954..59091,59898..60022,60825..61037,61550..61638,62449..62566,67590..67697))
location: region:51671-67697:-1
so has part: feature:67590-67697:-1:exon
so has part: feature:62449-62566:-1:exon
so has part: feature:61550-61638:-1:exon
so has part: feature:60825-61037:-1:exon
so has part: feature:59898-60022:-1:exon
so has part: feature:58954-59091:-1:exon
so has part: feature:57315-57396:-1:exon
so has part: feature:56161-56349:-1:exon
so has part: feature:53041-53142:-1:exon
so has part: feature:51671-51841:-1:exon

XP_040391018.1
type: Protein
SIO_000068: ncbiprotein

position:51671:-1
position: 51671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67697:-1
position: 67697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67590-67697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62449-62566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61550-61638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60825-61037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59898-60022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58954-59091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57315-57396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56161-56349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53041-53142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51671-51841:-1:exon

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(54774..54776),aa:Sec)
product: selenoprotein N isoform X2
translation: MAGPGAVSSRLALALAALAALAAVKYYRDAEAARQQELALKSLGSEGLFLFSSLDTNNDLYLSPEEFKPIAEKLTGVTPVSEFEEEETPDPTGETLSIVAKFQPLISHVALSGLRNWTAPAAHMSVMLAKQFKAFLPPKNKLDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKEITIHRLLSMFHPRPFVKTRFAPQGSVACIQAISTFYYAIAFRIHAEFQLNEPPNFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEVAAQKLEVAMYPFKKVSYFPFTQAFERAKAEKKLVHSILLWGALDDQSCUGSGRTLRETVLESSPILALLNESFISSWSLVKELEELQTNRENEFYSKLADLHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMKPEDVESSVFSFSNNFDDPSTATYLQFLKEGLQRAKSYVQT
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(51671..51841,53041..53142,53819..53931,54773..54878,56161..56349,57315..57396,58954..59091,59898..60022,60825..61037,61550..61638,62449..62566,67590..67697))
location: region:51671-67697:-1
so has part: feature:67590-67697:-1:exon
so has part: feature:62449-62566:-1:exon
so has part: feature:61550-61638:-1:exon
so has part: feature:60825-61037:-1:exon
so has part: feature:59898-60022:-1:exon
so has part: feature:58954-59091:-1:exon
so has part: feature:57315-57396:-1:exon
so has part: feature:56161-56349:-1:exon
so has part: feature:54773-54878:-1:exon
so has part: feature:53819-53931:-1:exon
so has part: feature:53041-53142:-1:exon
so has part: feature:51671-51841:-1:exon

XP_040391016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67590-67697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62449-62566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61550-61638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60825-61037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59898-60022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58954-59091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57315-57396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56161-56349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54773-54878:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53819-53931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53041-53142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51671-51841:-1:exon

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenoprotein N isoform X3
translation: MAGPGAVSSRLALALAALAALAAVKYYRDAEAARQQELALKSLGSEGLFLFSSLDTNNDLYLSPEEFKPIAEKLTGVTPVSEFEEEETPDPTGETLSIVAKFQPLVMETMTKSKDGFLGISHVALSGLRNWTAPAAHMSVMLAKQFKAFLPPKNKLDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKEITIHRLLSMFHPRPFVKTRFAPQGSVACIQAISTFYYAIAFRIHAEFQLNEPPNFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEVAAQKLEVAMYPFKKTNRENEFYSKLADLHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMKPEDVESSVFSFSNNFDDPSTATYLQFLKEGLQRAKSYVQT
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(51671..51841,53041..53142,56161..56349,57315..57396,58954..59091,59898..60022,60825..61037,61508..61638,62449..62566,67590..67697))
location: region:51671-67697:-1
so has part: feature:67590-67697:-1:exon
so has part: feature:62449-62566:-1:exon
so has part: feature:61508-61638:-1:exon
so has part: feature:60825-61037:-1:exon
so has part: feature:59898-60022:-1:exon
so has part: feature:58954-59091:-1:exon
so has part: feature:57315-57396:-1:exon
so has part: feature:56161-56349:-1:exon
so has part: feature:53041-53142:-1:exon
so has part: feature:51671-51841:-1:exon

XP_040391017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67590-67697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62449-62566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61508-61638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60825-61037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59898-60022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58954-59091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57315-57396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56161-56349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53041-53142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51671-51841:-1:exon

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(54774..54776),aa:Sec)
product: selenoprotein N isoform X1
translation: MAGPGAVSSRLALALAALAALAAVKYYRDAEAARQQELALKSLGSEGLFLFSSLDTNNDLYLSPEEFKPIAEKLTGVTPVSEFEEEETPDPTGETLSIVAKFQPLVMETMTKSKDGFLGISHVALSGLRNWTAPAAHMSVMLAKQFKAFLPPKNKLDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKEITIHRLLSMFHPRPFVKTRFAPQGSVACIQAISTFYYAIAFRIHAEFQLNEPPNFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEVAAQKLEVAMYPFKKVSYFPFTQAFERAKAEKKLVHSILLWGALDDQSCUGSGRTLRETVLESSPILALLNESFISSWSLVKELEELQTNRENEFYSKLADLHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMKPEDVESSVFSFSNNFDDPSTATYLQFLKEGLQRAKSYVQT
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: complement(join(51671..51841,53041..53142,53819..53931,54773..54878,56161..56349,57315..57396,58954..59091,59898..60022,60825..61037,61508..61638,62449..62566,67590..67697))
location: region:51671-67697:-1
so has part: feature:67590-67697:-1:exon
so has part: feature:62449-62566:-1:exon
so has part: feature:61508-61638:-1:exon
so has part: feature:60825-61037:-1:exon
so has part: feature:59898-60022:-1:exon
so has part: feature:58954-59091:-1:exon
so has part: feature:57315-57396:-1:exon
so has part: feature:56161-56349:-1:exon
so has part: feature:54773-54878:-1:exon
so has part: feature:53819-53931:-1:exon
so has part: feature:53041-53142:-1:exon
so has part: feature:51671-51841:-1:exon

XP_040391015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67590-67697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62449-62566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61508-61638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60825-61037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59898-60022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58954-59091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57315-57396:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56161-56349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54773-54878:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53819-53931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53041-53142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51671-51841:-1:exon

LOC121058929
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 67157..74623
location: region:67157-74623:1
so has part: feature:67157-74623:1:exon
subclass of: SO_0000011

121058929
type: Gene
SIO_000068: ncbigene

position:67157:1
position: 67157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74623:1
position: 74623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67157-74623:1:exon

LOC121058929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058929
product: uncharacterized LOC121058929
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814393.1
SIO_010081: LOC121058929
subclass of: SO_0000673
so part of: LOC121058929
location: join(67157..67276,71393..71587,73084..74623)
location: region:67157-74623:1
so has part: feature:67157-67276:1:exon
so has part: feature:71393-71587:1:exon
so has part: feature:73084-74623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67157-67276:1:exon

position:67276:1
position: 67276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71393-71587:1:exon

position:71393:1
position: 71393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71587:1
position: 71587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73084-74623:1:exon

position:73084:1
position: 73084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAN1C1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MAN1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(73771..119279)
location: region:73771-119279:-1
so has part: feature:73771-119279:-1:exon
subclass of: SO_0000010

121058924
type: Gene
SIO_000068: ncbigene

position:73771:-1
position: 73771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119279:-1
position: 119279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73771-119279:-1:exon

MAN1C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MAN1C1
product: mannosidase alpha class 1C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535078.1
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(73771..74578,75217..75332,76146..76318,78299..78518,78668..78783,82408..82501,84953..85076,89362..89456,91641..91721,94172..94287,108891..108987,117133..118175,118898..119279))
location: region:73771-119279:-1
so has part: feature:118898-119279:-1:exon
so has part: feature:117133-118175:-1:exon
so has part: feature:108891-108987:-1:exon
so has part: feature:94172-94287:-1:exon
so has part: feature:91641-91721:-1:exon
so has part: feature:89362-89456:-1:exon
so has part: feature:84953-85076:-1:exon
so has part: feature:82408-82501:-1:exon
so has part: feature:78668-78783:-1:exon
so has part: feature:78299-78518:-1:exon
so has part: feature:76146-76318:-1:exon
so has part: feature:75217-75332:-1:exon
so has part: feature:73771-74578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118898-119279:-1:exon

position:118898:-1
position: 118898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117133-118175:-1:exon

position:117133:-1
position: 117133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118175:-1
position: 118175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108891-108987:-1:exon

position:108891:-1
position: 108891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108987:-1
position: 108987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94172-94287:-1:exon

position:94172:-1
position: 94172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94287:-1
position: 94287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:91641-91721:-1:exon

position:91641:-1
position: 91641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91721:-1
position: 91721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:89362-89456:-1:exon

position:89362:-1
position: 89362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89456:-1
position: 89456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84953-85076:-1:exon

position:84953:-1
position: 84953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85076:-1
position: 85076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:82408-82501:-1:exon

position:82408:-1
position: 82408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82501:-1
position: 82501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:78668-78783:-1:exon

position:78668:-1
position: 78668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78783:-1
position: 78783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:78299-78518:-1:exon

position:78299:-1
position: 78299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78518:-1
position: 78518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:76146-76318:-1:exon

position:76146:-1
position: 76146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76318:-1
position: 76318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:75217-75332:-1:exon

position:75217:-1
position: 75217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75332:-1
position: 75332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:73771-74578:-1:exon

position:74578:-1
position: 74578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAN1C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MAN1C1
product: mannosidase alpha class 1C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040535079.1
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(73771..74578,75217..75332,76146..76318,78299..78518,78668..78783,82408..82501,84953..85076,89362..89456,91641..91721,94172..94287,108891..108987,117133..118175,118286..119279))
location: region:73771-119279:-1
so has part: feature:118286-119279:-1:exon
so has part: feature:117133-118175:-1:exon
so has part: feature:108891-108987:-1:exon
so has part: feature:94172-94287:-1:exon
so has part: feature:91641-91721:-1:exon
so has part: feature:89362-89456:-1:exon
so has part: feature:84953-85076:-1:exon
so has part: feature:82408-82501:-1:exon
so has part: feature:78668-78783:-1:exon
so has part: feature:78299-78518:-1:exon
so has part: feature:76146-76318:-1:exon
so has part: feature:75217-75332:-1:exon
so has part: feature:73771-74578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118286-119279:-1:exon

position:118286:-1
position: 118286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117133-118175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108891-108987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94172-94287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91641-91721:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89362-89456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84953-85076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82408-82501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:78668-78783:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78299-78518:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76146-76318:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75217-75332:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:73771-74578:-1:exon

MAN1C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MAN1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
translation: MVLLRKLPGMPGWPAALGLRLPQKFLFLLFLSGLLTLCFGALFLLPDSSRFKRLFLPRRATASSSSSSSASSSSTRDADLPHSPPAAAEPRHASPAAPRRLREKLRAAGPPAHTAAASRQQVQSDERRRELDTGAPPAARETRAPFRFDYERFRRSLRHPVRGGQPGEDPDTRGRRMKIKEMMKFAWDNYKQYAFGKNELRPLTKNGHIGNMFGGLRGATVVDALDTLYIMELEEEFQEAKKWVEKSFDLNVNGEASLFEVNIRYIGGLLAAYYLTGEEVFRSKALELGEKLLPAFNTPTGIPRGVINLGSGMSWSWGWASAGSSILAEFGTLHLEFLHLTELSGNPVFAEKVMNIRKVLNRVEKPQGLYPNFLSPVTGNWVQHHVSVGGLGDSFYEYLIKSWLMSDKKDSEAKKMYDDALEAIEKHLVRRSAGGLTYIAEWRGGILDHKMGHLACFSGGMIALGAEHASEERKQHYMDLAAEITNTCHESYARSDTKLGPEAFRFDTGTEAMATRLSERYYILRPEVVESYMYMWRLTHDLKYRQWGWEVVKALEKHCRVEAGFSGIRDVYTTVPTHDNMQQSFFLAETLKYLYLLFCEDDVLSLDDWVFNTEAHPLPVNHTDFKNKASVQ
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(74455..74578,75217..75332,76146..76318,78299..78518,78668..78783,82408..82501,84953..85076,89362..89456,91641..91721,94172..94287,108891..108987,117133..117675))
location: region:74455-117675:-1
so has part: feature:117133-117675:-1:exon
so has part: feature:108891-108987:-1:exon
so has part: feature:94172-94287:-1:exon
so has part: feature:91641-91721:-1:exon
so has part: feature:89362-89456:-1:exon
so has part: feature:84953-85076:-1:exon
so has part: feature:82408-82501:-1:exon
so has part: feature:78668-78783:-1:exon
so has part: feature:78299-78518:-1:exon
so has part: feature:76146-76318:-1:exon
so has part: feature:75217-75332:-1:exon
so has part: feature:74455-74578:-1:exon

XP_040391012.1
type: Protein
SIO_000068: ncbiprotein

position:74455:-1
position: 74455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117675:-1
position: 117675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117133-117675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108891-108987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94172-94287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91641-91721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89362-89456:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84953-85076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82408-82501:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78668-78783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:78299-78518:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76146-76318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75217-75332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:74455-74578:-1:exon

MAN1C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MAN1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
translation: MVLLRKLPGMPGWPAALGLRLPQKFLFLLFLSGLLTLCFGALFLLPDSSRFKRLFLPRRATASSSSSSSASSSSTRDADLPHSPPAAAEPRHASPAAPRRLREKLRAAGPPAHTAAASRQQVQSDERRRELDTGAPPAARETRAPFRFDYERFRRSLRHPVRGGQPGEDPDTRGRRMKIKEMMKFAWDNYKQYAFGKNELRPLTKNGHIGNMFGGLRGATVVDALDTLYIMELEEEFQEAKKWVEKSFDLNVNGEASLFEVNIRYIGGLLAAYYLTGEEVFRSKALELGEKLLPAFNTPTGIPRGVINLGSGMSWSWGWASAGSSILAEFGTLHLEFLHLTELSGNPVFAEKVMNIRKVLNRVEKPQGLYPNFLSPVTGNWVQHHVSVGGLGDSFYEYLIKSWLMSDKKDSEAKKMYDDALEAIEKHLVRRSAGGLTYIAEWRGGILDHKMGHLACFSGGMIALGAEHASEERKQHYMDLAAEITNTCHESYARSDTKLGPEAFRFDTGTEAMATRLSERYYILRPEVVESYMYMWRLTHDLKYRQWGWEVVKALEKHCRVEAGFSGIRDVYTTVPTHDNMQQSFFLAETLKYLYLLFCEDDVLSLDDWVFNTEAHPLPVNHTDFKNKASVQ
SIO_010081: MAN1C1
subclass of: SO_0000673
so part of: MAN1C1
location: complement(join(74455..74578,75217..75332,76146..76318,78299..78518,78668..78783,82408..82501,84953..85076,89362..89456,91641..91721,94172..94287,108891..108987,117133..117675))
location: region:74455-117675:-1
so has part: feature:117133-117675:-1:exon
so has part: feature:108891-108987:-1:exon
so has part: feature:94172-94287:-1:exon
so has part: feature:91641-91721:-1:exon
so has part: feature:89362-89456:-1:exon
so has part: feature:84953-85076:-1:exon
so has part: feature:82408-82501:-1:exon
so has part: feature:78668-78783:-1:exon
so has part: feature:78299-78518:-1:exon
so has part: feature:76146-76318:-1:exon
so has part: feature:75217-75332:-1:exon
so has part: feature:74455-74578:-1:exon

XP_040391013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117133-117675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108891-108987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94172-94287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91641-91721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89362-89456:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84953-85076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82408-82501:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78668-78783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:78299-78518:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76146-76318:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75217-75332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:74455-74578:-1:exon

LDLRAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121387..142005)
location: region:121387-142005:-1
so has part: feature:121387-142005:-1:exon
subclass of: SO_0000010

121058926
type: Gene
SIO_000068: ncbigene

position:121387:-1
position: 121387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142005:-1
position: 142005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121387-142005:-1:exon

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 105 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535086.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(121387..123424,125234..125268,127153..127280,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141858..142005))
location: region:121387-142005:-1
so has part: feature:141858-142005:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127280:-1:exon
so has part: feature:125234-125268:-1:exon
so has part: feature:121387-123424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141858-142005:-1:exon

position:141858:-1
position: 141858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

position:137058:-1
position: 137058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137200:-1
position: 137200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

position:135278:-1
position: 135278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135390:-1
position: 135390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

position:132400:-1
position: 132400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132514:-1
position: 132514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

position:129254:-1
position: 129254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129326:-1
position: 129326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

position:128596:-1
position: 128596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128679:-1
position: 128679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127280:-1:exon

position:127153:-1
position: 127153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127280:-1
position: 127280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125234-125268:-1:exon

position:125234:-1
position: 125234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125268:-1
position: 125268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:121387-123424:-1:exon

position:123424:-1
position: 123424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535085.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(121387..123424,125234..125268,127153..127283,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141858..141998))
location: region:121387-141998:-1
so has part: feature:141858-141998:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127283:-1:exon
so has part: feature:125234-125268:-1:exon
so has part: feature:121387-123424:-1:exon

position:141998:-1
position: 141998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141858-141998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127283:-1:exon

position:127283:-1
position: 127283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125234-125268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121387-123424:-1:exon

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535090.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(121387..123424,127153..127280,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141858..141995))
location: region:121387-141995:-1
so has part: feature:141858-141995:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127280:-1:exon
so has part: feature:121387-123424:-1:exon

position:141995:-1
position: 141995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141858-141995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121387-123424:-1:exon

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535089.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(121387..123424,127153..127283,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141858..141995))
location: region:121387-141995:-1
so has part: feature:141858-141995:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127283:-1:exon
so has part: feature:121387-123424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141858-141995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121387-123424:-1:exon

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535087.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(121387..123424,125234..125268,127153..127283,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141104..141300))
location: region:121387-141300:-1
so has part: feature:141104-141300:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127283:-1:exon
so has part: feature:125234-125268:-1:exon
so has part: feature:121387-123424:-1:exon

position:141300:-1
position: 141300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141104-141300:-1:exon

position:141104:-1
position: 141104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125234-125268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121387-123424:-1:exon

LDLRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LDLRAP1
product: low density lipoprotein receptor adaptor protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535088.1
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(121387..123424,125234..125268,127153..127280,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141104..141292))
location: region:121387-141292:-1
so has part: feature:141104-141292:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127280:-1:exon
so has part: feature:125234-125268:-1:exon
so has part: feature:121387-123424:-1:exon

position:141292:-1
position: 141292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141104-141292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125234-125268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121387-123424:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X2
translation: MDALRSAGRALLRSPSVAKPSWAGGRHKKLPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSRTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFELWQASKEEKEKRERSILEGEGSSSPNLDAHACPDTPVTANLLDLEDPAKLTLSGSANSVHLDNSMFGPSSSVNNNMMWEMDDGLDEAFSRLAQSRTNPHVLDTGLTAQDIQSAEMLSPVDWDKIDPNTGEKDDVFMF
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(123280..123424,125234..125268,127153..127280,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141858..141942))
location: region:123280-141942:-1
so has part: feature:141858-141942:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127280:-1:exon
so has part: feature:125234-125268:-1:exon
so has part: feature:123280-123424:-1:exon

XP_040391020.1
type: Protein
SIO_000068: ncbiprotein

position:123280:-1
position: 123280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141942:-1
position: 141942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141858-141942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125234-125268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:123280-123424:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X1
translation: MDALRSAGRALLRSPSVAKPSWAGGRHKKLPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSRTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFELWQASKEEKEKRERSILEGEGSSSPNLDAHACPDTPAVTANLLDLEDPAKLTLSGSANSVHLDNSMFGPSSSVNNNMMWEMDDGLDEAFSRLAQSRTNPHVLDTGLTAQDIQSAEMLSPVDWDKIDPNTGEKDDVFMF
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(123280..123424,125234..125268,127153..127283,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141858..141942))
location: region:123280-141942:-1
so has part: feature:141858-141942:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127283:-1:exon
so has part: feature:125234-125268:-1:exon
so has part: feature:123280-123424:-1:exon

XP_040391019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141858-141942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125234-125268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:123280-123424:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X4
translation: MWEELPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSRTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFELWQASKEEKEKRERSILEGEGSSSPNLDAHACPDTPVTANLLDLEDPAKLTLSGSANSVHLDNSMFGPSSSVNNNMMWEMDDGLDEAFSRLAQSRTNPHVLDTGLTAQDIQSAEMLSPVDWDKIDPNTGEKDDVFMF
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(123280..123424,125234..125268,127153..127280,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141104..141113))
location: region:123280-141113:-1
so has part: feature:141104-141113:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127280:-1:exon
so has part: feature:125234-125268:-1:exon
so has part: feature:123280-123424:-1:exon

XP_040391022.1
type: Protein
SIO_000068: ncbiprotein

position:141113:-1
position: 141113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141104-141113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125234-125268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:123280-123424:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X3
translation: MWEELPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSRTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFELWQASKEEKEKRERSILEGEGSSSPNLDAHACPDTPAVTANLLDLEDPAKLTLSGSANSVHLDNSMFGPSSSVNNNMMWEMDDGLDEAFSRLAQSRTNPHVLDTGLTAQDIQSAEMLSPVDWDKIDPNTGEKDDVFMF
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(123280..123424,125234..125268,127153..127283,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141104..141113))
location: region:123280-141113:-1
so has part: feature:141104-141113:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127283:-1:exon
so has part: feature:125234-125268:-1:exon
so has part: feature:123280-123424:-1:exon

XP_040391021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141104-141113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125234-125268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:123280-123424:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X6
translation: MDALRSAGRALLRSPSVAKPSWAGGRHKKLPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSRTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFELWQASKEEKEKRERSILEGEGSSSPNLDAHACPDTPVTANLLDLEDPAKLTLSGSANSVHLDNSMFGPSSSVNNNMMWTCSVENKPSRSRHGTDSSRHPERRNAFTCRLG
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(123326..123424,127153..127280,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141858..141942))
location: region:123326-141942:-1
so has part: feature:141858-141942:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127280:-1:exon
so has part: feature:123326-123424:-1:exon

XP_040391024.1
type: Protein
SIO_000068: ncbiprotein

position:123326:-1
position: 123326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141858-141942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123326-123424:-1:exon

LDLRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LDLRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low density lipoprotein receptor adapter protein 1 isoform X5
translation: MDALRSAGRALLRSPSVAKPSWAGGRHKKLPENWTDTRETLLEGVLFSLKYLGMTLVEQPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIVLNDSRTNELIENISIYRISYCTADKIHDKVFAYIAQNQLNENLECHAFLCTKRKMAQAVTLTVAQAFKIAFELWQASKEEKEKRERSILEGEGSSSPNLDAHACPDTPAVTANLLDLEDPAKLTLSGSANSVHLDNSMFGPSSSVNNNMMWTCSVENKPSRSRHGTDSSRHPERRNAFTCRLG
SIO_010081: LDLRAP1
subclass of: SO_0000673
so part of: LDLRAP1
location: complement(join(123326..123424,127153..127283,128596..128679,129254..129326,132400..132514,135278..135390,137058..137200,141858..141942))
location: region:123326-141942:-1
so has part: feature:141858-141942:-1:exon
so has part: feature:137058-137200:-1:exon
so has part: feature:135278-135390:-1:exon
so has part: feature:132400-132514:-1:exon
so has part: feature:129254-129326:-1:exon
so has part: feature:128596-128679:-1:exon
so has part: feature:127153-127283:-1:exon
so has part: feature:123326-123424:-1:exon

XP_040391023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141858-141942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137058-137200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135278-135390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132400-132514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129254-129326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128596-128679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127153-127283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123326-123424:-1:exon

MACO1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MACO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(149986..178869)
location: region:149986-178869:-1
so has part: feature:149986-178869:-1:exon
subclass of: SO_0000010

121059035
type: Gene
SIO_000068: ncbigene

position:149986:-1
position: 149986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178869:-1
position: 178869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149986-178869:-1:exon

MACO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MACO1
product: macoilin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535324.1
SIO_010081: MACO1
subclass of: SO_0000673
so part of: MACO1
location: complement(join(149986..151162,152285..152459,153413..153533,154346..154528,154725..154883,162240..162735,163189..163367,165584..165707,167709..167835,168521..168662,178597..178869))
location: region:149986-178869:-1
so has part: feature:178597-178869:-1:exon
so has part: feature:168521-168662:-1:exon
so has part: feature:167709-167835:-1:exon
so has part: feature:165584-165707:-1:exon
so has part: feature:163189-163367:-1:exon
so has part: feature:162240-162735:-1:exon
so has part: feature:154725-154883:-1:exon
so has part: feature:154346-154528:-1:exon
so has part: feature:153413-153533:-1:exon
so has part: feature:152285-152459:-1:exon
so has part: feature:149986-151162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178597-178869:-1:exon

position:178597:-1
position: 178597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168521-168662:-1:exon

position:168521:-1
position: 168521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168662:-1
position: 168662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167709-167835:-1:exon

position:167709:-1
position: 167709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167835:-1
position: 167835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:165584-165707:-1:exon

position:165584:-1
position: 165584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165707:-1
position: 165707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:163189-163367:-1:exon

position:163189:-1
position: 163189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163367:-1
position: 163367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:162240-162735:-1:exon

position:162240:-1
position: 162240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162735:-1
position: 162735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:154725-154883:-1:exon

position:154725:-1
position: 154725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154883:-1
position: 154883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:154346-154528:-1:exon

position:154346:-1
position: 154346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154528:-1
position: 154528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:153413-153533:-1:exon

position:153413:-1
position: 153413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153533:-1
position: 153533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:152285-152459:-1:exon

position:152285:-1
position: 152285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152459:-1
position: 152459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:149986-151162:-1:exon

position:151162:-1
position: 151162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MACO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MACO1
product: macoilin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040535325.1
SIO_010081: MACO1
subclass of: SO_0000673
so part of: MACO1
location: complement(join(149986..151162,152285..152459,153413..153533,154346..154528,154725..154883,162240..162735,163189..163367,165584..165707,167709..167835,168521..168662,170498..170543,177792..177819))
location: region:149986-177819:-1
so has part: feature:177792-177819:-1:exon
so has part: feature:170498-170543:-1:exon
so has part: feature:168521-168662:-1:exon
so has part: feature:167709-167835:-1:exon
so has part: feature:165584-165707:-1:exon
so has part: feature:163189-163367:-1:exon
so has part: feature:162240-162735:-1:exon
so has part: feature:154725-154883:-1:exon
so has part: feature:154346-154528:-1:exon
so has part: feature:153413-153533:-1:exon
so has part: feature:152285-152459:-1:exon
so has part: feature:149986-151162:-1:exon

position:177819:-1
position: 177819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177792-177819:-1:exon

position:177792:-1
position: 177792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170498-170543:-1:exon

position:170498:-1
position: 170498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170543:-1
position: 170543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:168521-168662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167709-167835:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165584-165707:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163189-163367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162240-162735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154725-154883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154346-154528:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153413-153533:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152285-152459:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149986-151162:-1:exon

MACO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MACO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macoilin isoform X1
translation: MKRRSAECSKLRRPLKRNRIAEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYDSFRYQGLAFSVFFVCVAFTSNIICLLFIPIQWLFFAASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRFKDLKNFHVDLCRPFAAHCIGYPVVTLGFGFKSYVSYKMRLRKQKEVQKENEFYMQLLQQALPPEQQMLQRQEREAEEAKGLSEMDSSILLQHNGGIPTNKKVSATLPELEYREKGKEKDKDAKKHNLGINNNILQPVDSKIQEIEYMENHINSKRLNNDLVGSTENLLKEDSCTASSKNYKNVSGVVNSSPRSHSATNGSIPSSSTKNEKKQKCPSKSPSAHKDLMENCIPNNQLSKPDALVRLEQDIKKLKADLQASRQIEQELRSQISSLTNTERGIRSEIGQLRQENELLQNKLHNAVQMKQKDKQMISQLEKKLKAEQEARAFVEKQLMEEKKRKKLEEATAARAVAFAAATRGECTETLRNRIRELETECKKLTIDIKLKEDQIRELEMKVQELRKYKENEKDTEVLMSALSAMQDKTQHLENSLSAETRIKLDLFSALGDAKRQLEIAQGQIIQKDQEIKDLKQKIAEVMAVMPSITYTAATSTLSPVSPHYSSKFVETSPSGLDPNASVYQPMKK
SIO_010081: MACO1
subclass of: SO_0000673
so part of: MACO1
location: complement(join(150960..151162,152285..152459,153413..153533,154346..154528,154725..154883,162240..162735,163189..163367,165584..165707,167709..167835,168521..168662,178597..178676))
location: region:150960-178676:-1
so has part: feature:178597-178676:-1:exon
so has part: feature:168521-168662:-1:exon
so has part: feature:167709-167835:-1:exon
so has part: feature:165584-165707:-1:exon
so has part: feature:163189-163367:-1:exon
so has part: feature:162240-162735:-1:exon
so has part: feature:154725-154883:-1:exon
so has part: feature:154346-154528:-1:exon
so has part: feature:153413-153533:-1:exon
so has part: feature:152285-152459:-1:exon
so has part: feature:150960-151162:-1:exon

XP_040391258.1
type: Protein
SIO_000068: ncbiprotein

position:150960:-1
position: 150960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178676:-1
position: 178676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178597-178676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168521-168662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167709-167835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165584-165707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163189-163367:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162240-162735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154725-154883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154346-154528:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153413-153533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152285-152459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150960-151162:-1:exon

MACO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MACO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macoilin isoform X2
translation: MLCTGSTIHGENTFKKGGQSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYDSFRYQGLAFSVFFVCVAFTSNIICLLFIPIQWLFFAASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRFKDLKNFHVDLCRPFAAHCIGYPVVTLGFGFKSYVSYKMRLRKQKEVQKENEFYMQLLQQALPPEQQMLQRQEREAEEAKGLSEMDSSILLQHNGGIPTNKKVSATLPELEYREKGKEKDKDAKKHNLGINNNILQPVDSKIQEIEYMENHINSKRLNNDLVGSTENLLKEDSCTASSKNYKNVSGVVNSSPRSHSATNGSIPSSSTKNEKKQKCPSKSPSAHKDLMENCIPNNQLSKPDALVRLEQDIKKLKADLQASRQIEQELRSQISSLTNTERGIRSEIGQLRQENELLQNKLHNAVQMKQKDKQMISQLEKKLKAEQEARAFVEKQLMEEKKRKKLEEATAARAVAFAAATRGECTETLRNRIRELETECKKLTIDIKLKEDQIRELEMKVQELRKYKENEKDTEVLMSALSAMQDKTQHLENSLSAETRIKLDLFSALGDAKRQLEIAQGQIIQKDQEIKDLKQKIAEVMAVMPSITYTAATSTLSPVSPHYSSKFVETSPSGLDPNASVYQPMKK
SIO_010081: MACO1
subclass of: SO_0000673
so part of: MACO1
location: complement(join(150960..151162,152285..152459,153413..153533,154346..154528,154725..154883,162240..162735,163189..163367,165584..165707,167709..167835,168521..168662,170498..170543,177792..177804))
location: region:150960-177804:-1
so has part: feature:177792-177804:-1:exon
so has part: feature:170498-170543:-1:exon
so has part: feature:168521-168662:-1:exon
so has part: feature:167709-167835:-1:exon
so has part: feature:165584-165707:-1:exon
so has part: feature:163189-163367:-1:exon
so has part: feature:162240-162735:-1:exon
so has part: feature:154725-154883:-1:exon
so has part: feature:154346-154528:-1:exon
so has part: feature:153413-153533:-1:exon
so has part: feature:152285-152459:-1:exon
so has part: feature:150960-151162:-1:exon

XP_040391259.1
type: Protein
SIO_000068: ncbiprotein

position:177804:-1
position: 177804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177792-177804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170498-170543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168521-168662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167709-167835:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165584-165707:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163189-163367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162240-162735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154725-154883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154346-154528:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153413-153533:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152285-152459:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150960-151162:-1:exon

LOC121059037
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179865..193544
location: region:179865-193544:1
so has part: feature:179865-193544:1:exon
subclass of: SO_0000010

121059037
type: Gene
SIO_000068: ncbigene

position:179865:1
position: 179865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193544:1
position: 193544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179865-193544:1:exon

LOC121059037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059037
product: RH-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535326.1
SIO_010081: LOC121059037
subclass of: SO_0000673
so part of: LOC121059037
location: join(179865..182634,183627..183813,184036..184186,184859..185000,187345..187505,187823..187960,188192..188322,189126..189205,190295..190368,190864..193544)
location: region:179865-193544:1
so has part: feature:179865-182634:1:exon
so has part: feature:183627-183813:1:exon
so has part: feature:184036-184186:1:exon
so has part: feature:184859-185000:1:exon
so has part: feature:187345-187505:1:exon
so has part: feature:187823-187960:1:exon
so has part: feature:188192-188322:1:exon
so has part: feature:189126-189205:1:exon
so has part: feature:190295-190368:1:exon
so has part: feature:190864-193544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179865-182634:1:exon

position:182634:1
position: 182634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183627-183813:1:exon

position:183627:1
position: 183627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183813:1
position: 183813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184036-184186:1:exon

position:184036:1
position: 184036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184186:1
position: 184186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:184859-185000:1:exon

position:184859:1
position: 184859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185000:1
position: 185000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187345-187505:1:exon

position:187345:1
position: 187345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187505:1
position: 187505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:187823-187960:1:exon

position:187823:1
position: 187823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187960:1
position: 187960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:188192-188322:1:exon

position:188192:1
position: 188192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188322:1
position: 188322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:189126-189205:1:exon

position:189126:1
position: 189126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189205:1
position: 189205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:190295-190368:1:exon

position:190295:1
position: 190295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190368:1
position: 190368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:190864-193544:1:exon

position:190864:1
position: 190864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121059037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059037
product: RH-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040535327.1
SIO_010081: LOC121059037
subclass of: SO_0000673
so part of: LOC121059037
location: join(179868..180793,182599..182634,183627..183813,184036..184186,184859..185000,187345..187505,187823..187960,188192..188322,189126..189205,190295..190368,190864..193544)
location: region:179868-193544:1
so has part: feature:179868-180793:1:exon
so has part: feature:182599-182634:1:exon
so has part: feature:183627-183813:1:exon
so has part: feature:184036-184186:1:exon
so has part: feature:184859-185000:1:exon
so has part: feature:187345-187505:1:exon
so has part: feature:187823-187960:1:exon
so has part: feature:188192-188322:1:exon
so has part: feature:189126-189205:1:exon
so has part: feature:190295-190368:1:exon
so has part: feature:190864-193544:1:exon

position:179868:1
position: 179868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179868-180793:1:exon

position:180793:1
position: 180793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182599-182634:1:exon

position:182599:1
position: 182599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183627-183813:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:184036-184186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184859-185000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187345-187505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187823-187960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188192-188322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189126-189205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190295-190368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190864-193544:1:exon

LOC121059037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059037
product: RH-like protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040535329.1
SIO_010081: LOC121059037
subclass of: SO_0000673
so part of: LOC121059037
location: join(179868..180164,182599..182634,183627..183813,184036..184186,184859..185000,187345..187505,187823..187960,188192..188322,189126..189205,190295..190368,190864..193544)
location: region:179868-193544:1
so has part: feature:179868-180164:1:exon
so has part: feature:182599-182634:1:exon
so has part: feature:183627-183813:1:exon
so has part: feature:184036-184186:1:exon
so has part: feature:184859-185000:1:exon
so has part: feature:187345-187505:1:exon
so has part: feature:187823-187960:1:exon
so has part: feature:188192-188322:1:exon
so has part: feature:189126-189205:1:exon
so has part: feature:190295-190368:1:exon
so has part: feature:190864-193544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179868-180164:1:exon

position:180164:1
position: 180164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182599-182634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183627-183813:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:184036-184186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184859-185000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187345-187505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187823-187960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188192-188322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189126-189205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190295-190368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190864-193544:1:exon

LOC121059037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059037
product: RH-like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535328.1
SIO_010081: LOC121059037
subclass of: SO_0000673
so part of: LOC121059037
location: join(179868..180093,182599..182634,183627..183813,184036..184186,184859..185000,187345..187505,187823..187960,188192..188322,189126..189205,190295..190368,190864..193544)
location: region:179868-193544:1
so has part: feature:179868-180093:1:exon
so has part: feature:182599-182634:1:exon
so has part: feature:183627-183813:1:exon
so has part: feature:184036-184186:1:exon
so has part: feature:184859-185000:1:exon
so has part: feature:187345-187505:1:exon
so has part: feature:187823-187960:1:exon
so has part: feature:188192-188322:1:exon
so has part: feature:189126-189205:1:exon
so has part: feature:190295-190368:1:exon
so has part: feature:190864-193544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179868-180093:1:exon

position:180093:1
position: 180093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182599-182634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183627-183813:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:184036-184186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184859-185000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187345-187505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187823-187960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188192-188322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189126-189205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190295-190368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190864-193544:1:exon

LOC121059037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RH-like protein isoform X1
translation: MPSNYRSFRKSVPWLILFLETVFVILFYFLFSGYNASISNISYTDFQDVNNMVIFGFGFFLAFLKRYSFSSTGFNLLIIVLGVQCSILMEGLLVLLLQEAKEGGLKIITTAVVSMTAVVISSGAVLGKTNPIQLIVMTVVEVIVFHVSRWINKRFLQVPDNLSMMHVHLFGAYFGLAVSSRFSEPSPRSEKNASTPKSDLLSMLGTLFLWVFWPSFNSVLADADKTKAIYNTYFALAVSAVTAFTLSVLTTKDGKFRMTHVHSAALAGGVTVCYAAESIDYPWIAMILGLLASLITILGSFCLQRYLNPALKIHDASGVHFTFGLPGLLGAVAQVVLLVIKKWTVLPSLGYVVMIYIGAFCLTISVALITGFITGLILNFKLLKIIPVSKYFEDHFYWEFPHLAVGF
SIO_010081: LOC121059037
subclass of: SO_0000673
so part of: LOC121059037
location: join(182502..182634,183627..183813,184036..184186,184859..185000,187345..187505,187823..187960,188192..188322,189126..189205,190295..190368,190864..190890)
location: region:182502-190890:1
so has part: feature:182502-182634:1:exon
so has part: feature:183627-183813:1:exon
so has part: feature:184036-184186:1:exon
so has part: feature:184859-185000:1:exon
so has part: feature:187345-187505:1:exon
so has part: feature:187823-187960:1:exon
so has part: feature:188192-188322:1:exon
so has part: feature:189126-189205:1:exon
so has part: feature:190295-190368:1:exon
so has part: feature:190864-190890:1:exon

XP_040391260.1
type: Protein
SIO_000068: ncbiprotein

position:182502:1
position: 182502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190890:1
position: 190890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182502-182634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183627-183813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184036-184186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:184859-185000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187345-187505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187823-187960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188192-188322:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189126-189205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190295-190368:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190864-190890:1:exon

LOC121059037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RH-like protein isoform X2
translation: MVIFGFGFFLAFLKRYSFSSTGFNLLIIVLGVQCSILMEGLLVLLLQEAKEGGLKIITTAVVSMTAVVISSGAVLGKTNPIQLIVMTVVEVIVFHVSRWINKRFLQVPDNLSMMHVHLFGAYFGLAVSSRFSEPSPRSEKNASTPKSDLLSMLGTLFLWVFWPSFNSVLADADKTKAIYNTYFALAVSAVTAFTLSVLTTKDGKFRMTHVHSAALAGGVTVCYAAESIDYPWIAMILGLLASLITILGSFCLQRYLNPALKIHDASGVHFTFGLPGLLGAVAQVVLLVIKKWTVLPSLGYVVMIYIGAFCLTISVALITGFITGLILNFKLLKIIPVSKYFEDHFYWEFPHLAVGF
SIO_010081: LOC121059037
subclass of: SO_0000673
so part of: LOC121059037
location: join(183647..183813,184036..184186,184859..185000,187345..187505,187823..187960,188192..188322,189126..189205,190295..190368,190864..190890)
location: region:183647-190890:1
so has part: feature:183647-183813:1:exon
so has part: feature:184036-184186:1:exon
so has part: feature:184859-185000:1:exon
so has part: feature:187345-187505:1:exon
so has part: feature:187823-187960:1:exon
so has part: feature:188192-188322:1:exon
so has part: feature:189126-189205:1:exon
so has part: feature:190295-190368:1:exon
so has part: feature:190864-190890:1:exon

XP_040391261.1
type: Protein
SIO_000068: ncbiprotein

position:183647:1
position: 183647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183647-183813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184036-184186:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184859-185000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187345-187505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187823-187960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188192-188322:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189126-189205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190295-190368:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190864-190890:1:exon

LOC121059037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RH-like protein isoform X2
translation: MVIFGFGFFLAFLKRYSFSSTGFNLLIIVLGVQCSILMEGLLVLLLQEAKEGGLKIITTAVVSMTAVVISSGAVLGKTNPIQLIVMTVVEVIVFHVSRWINKRFLQVPDNLSMMHVHLFGAYFGLAVSSRFSEPSPRSEKNASTPKSDLLSMLGTLFLWVFWPSFNSVLADADKTKAIYNTYFALAVSAVTAFTLSVLTTKDGKFRMTHVHSAALAGGVTVCYAAESIDYPWIAMILGLLASLITILGSFCLQRYLNPALKIHDASGVHFTFGLPGLLGAVAQVVLLVIKKWTVLPSLGYVVMIYIGAFCLTISVALITGFITGLILNFKLLKIIPVSKYFEDHFYWEFPHLAVGF
SIO_010081: LOC121059037
subclass of: SO_0000673
so part of: LOC121059037
location: join(183647..183813,184036..184186,184859..185000,187345..187505,187823..187960,188192..188322,189126..189205,190295..190368,190864..190890)
location: region:183647-190890:1
so has part: feature:183647-183813:1:exon
so has part: feature:184036-184186:1:exon
so has part: feature:184859-185000:1:exon
so has part: feature:187345-187505:1:exon
so has part: feature:187823-187960:1:exon
so has part: feature:188192-188322:1:exon
so has part: feature:189126-189205:1:exon
so has part: feature:190295-190368:1:exon
so has part: feature:190864-190890:1:exon

XP_040391262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183647-183813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184036-184186:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184859-185000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187345-187505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187823-187960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188192-188322:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189126-189205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190295-190368:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190864-190890:1:exon

LOC121059037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RH-like protein isoform X2
translation: MVIFGFGFFLAFLKRYSFSSTGFNLLIIVLGVQCSILMEGLLVLLLQEAKEGGLKIITTAVVSMTAVVISSGAVLGKTNPIQLIVMTVVEVIVFHVSRWINKRFLQVPDNLSMMHVHLFGAYFGLAVSSRFSEPSPRSEKNASTPKSDLLSMLGTLFLWVFWPSFNSVLADADKTKAIYNTYFALAVSAVTAFTLSVLTTKDGKFRMTHVHSAALAGGVTVCYAAESIDYPWIAMILGLLASLITILGSFCLQRYLNPALKIHDASGVHFTFGLPGLLGAVAQVVLLVIKKWTVLPSLGYVVMIYIGAFCLTISVALITGFITGLILNFKLLKIIPVSKYFEDHFYWEFPHLAVGF
SIO_010081: LOC121059037
subclass of: SO_0000673
so part of: LOC121059037
location: join(183647..183813,184036..184186,184859..185000,187345..187505,187823..187960,188192..188322,189126..189205,190295..190368,190864..190890)
location: region:183647-190890:1
so has part: feature:183647-183813:1:exon
so has part: feature:184036-184186:1:exon
so has part: feature:184859-185000:1:exon
so has part: feature:187345-187505:1:exon
so has part: feature:187823-187960:1:exon
so has part: feature:188192-188322:1:exon
so has part: feature:189126-189205:1:exon
so has part: feature:190295-190368:1:exon
so has part: feature:190864-190890:1:exon

XP_040391263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183647-183813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184036-184186:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184859-185000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187345-187505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187823-187960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188192-188322:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189126-189205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190295-190368:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190864-190890:1:exon

TMEM50A
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189462..197289)
location: region:189462-197289:-1
so has part: feature:189462-197289:-1:exon
subclass of: SO_0000010

121059039
type: Gene
SIO_000068: ncbigene

position:189462:-1
position: 189462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197289:-1
position: 197289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189462-197289:-1:exon

TMEM50A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814417.1
SIO_010081: TMEM50A
so part of: TMEM50A
location: complement(join(189462..189765,192037..192111,193826..193886,194910..195002,195203..195270,196265..196377,196688..196847,197143..197289))
location: region:189462-197289:-1
so has part: feature:197143-197289:-1:exon
so has part: feature:196688-196847:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:192037-192111:-1:exon
so has part: feature:189462-189765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197143-197289:-1:exon

position:197143:-1
position: 197143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196688-196847:-1:exon

position:196688:-1
position: 196688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196847:-1
position: 196847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196265-196377:-1:exon

position:196265:-1
position: 196265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196377:-1
position: 196377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195203-195270:-1:exon

position:195203:-1
position: 195203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195270:-1
position: 195270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194910-195002:-1:exon

position:194910:-1
position: 194910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195002:-1
position: 195002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:193826-193886:-1:exon

position:193826:-1
position: 193826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193886:-1
position: 193886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:192037-192111:-1:exon

position:192037:-1
position: 192037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192111:-1
position: 192111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:189462-189765:-1:exon

position:189765:-1
position: 189765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535340.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(191829..192111,193826..193886,194910..195002,195203..195270,196265..196377,196688..196847,197143..197289))
location: region:191829-197289:-1
so has part: feature:197143-197289:-1:exon
so has part: feature:196688-196847:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:191829-192111:-1:exon

position:191829:-1
position: 191829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197143-197289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196688-196847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191829-192111:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A isoform X2
translation: MSGLLESVRCSECVDWGEKRNTIASVAAGVLVRAALPLLCRSASELKFFTGWWIIIDAAVKYPKMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGFMMAFGSLIASMWILFGGYVVKEKTVVYPGIAVFFQNAFIFFGIFCTVRL
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(192087..192111,193826..193886,194910..195002,195203..195270,196265..196377,196688..196828))
location: region:192087-196828:-1
so has part: feature:196688-196828:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:192087-192111:-1:exon

XP_040391274.1
type: Protein
SIO_000068: ncbiprotein

position:192087:-1
position: 192087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196828:-1
position: 196828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196688-196828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192087-192111:-1:exon

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535338.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(193109..193543,193826..193886,194910..195002,195203..195270,196265..196377,196688..196847,197143..197283))
location: region:193109-197283:-1
so has part: feature:197143-197283:-1:exon
so has part: feature:196688-196847:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:193109-193543:-1:exon

position:193109:-1
position: 193109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197283:-1
position: 197283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197143-197283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196688-196847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193109-193543:-1:exon

position:193543:-1
position: 193543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535339.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(193109..193543,193826..193886,194910..195002,195203..195270,196265..196377,196688..196847,196971..197113))
location: region:193109-197113:-1
so has part: feature:196971-197113:-1:exon
so has part: feature:196688-196847:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:193109-193543:-1:exon

position:197113:-1
position: 197113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196971-197113:-1:exon

position:196971:-1
position: 196971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196688-196847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193109-193543:-1:exon

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535341.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(193357..193543,193826..193886,194910..195002,195203..195270,196265..196377,196736..196847,197143..197280))
location: region:193357-197280:-1
so has part: feature:197143-197280:-1:exon
so has part: feature:196736-196847:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:193357-193543:-1:exon

position:193357:-1
position: 193357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197280:-1
position: 197280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197143-197280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196736-196847:-1:exon

position:196736:-1
position: 196736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193357-193543:-1:exon

TMEM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TMEM50A
product: transmembrane protein 50A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535342.1
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(193357..193543,193826..193886,194910..195002,195203..195270,196265..196377,196736..196847,196971..197153))
location: region:193357-197153:-1
so has part: feature:196971-197153:-1:exon
so has part: feature:196736-196847:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:193357-193543:-1:exon

position:197153:-1
position: 197153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196971-197153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196736-196847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193357-193543:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A isoform X3
translation: MSGLLESVRCSECVDWGEKRNTIASVAAGVLFFTGWWIIIDAAVKYPKMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGFMMAFGSLIASMWILFGGYVVKEKTVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(193498..193543,193826..193886,194910..195002,195203..195270,196265..196377,196736..196828))
location: region:193498-196828:-1
so has part: feature:196736-196828:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:193498-193543:-1:exon

XP_040391275.1
type: Protein
SIO_000068: ncbiprotein

position:193498:-1
position: 193498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196736-196828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193498-193543:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A isoform X3
translation: MSGLLESVRCSECVDWGEKRNTIASVAAGVLFFTGWWIIIDAAVKYPKMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGFMMAFGSLIASMWILFGGYVVKEKTVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(193498..193543,193826..193886,194910..195002,195203..195270,196265..196377,196736..196828))
location: region:193498-196828:-1
so has part: feature:196736-196828:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:193498-193543:-1:exon

XP_040391276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196736-196828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193498-193543:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A isoform X1
translation: MSGLLESVRCSECVDWGEKRNTIASVAAGVLVRAALPLLCRSASELKFFTGWWIIIDAAVKYPKMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGFMMAFGSLIASMWILFGGYVVKEKTVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(193498..193543,193826..193886,194910..195002,195203..195270,196265..196377,196688..196828))
location: region:193498-196828:-1
so has part: feature:196688-196828:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:193498-193543:-1:exon

XP_040391272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196688-196828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193498-193543:-1:exon

TMEM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TMEM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 50A isoform X1
translation: MSGLLESVRCSECVDWGEKRNTIASVAAGVLVRAALPLLCRSASELKFFTGWWIIIDAAVKYPKMEDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGCLGQTGARIWLFIGFMMAFGSLIASMWILFGGYVVKEKTVVYPGIAVFFQNAFIFFGGLVFKFGRTEDLWQ
SIO_010081: TMEM50A
subclass of: SO_0000673
so part of: TMEM50A
location: complement(join(193498..193543,193826..193886,194910..195002,195203..195270,196265..196377,196688..196828))
location: region:193498-196828:-1
so has part: feature:196688-196828:-1:exon
so has part: feature:196265-196377:-1:exon
so has part: feature:195203-195270:-1:exon
so has part: feature:194910-195002:-1:exon
so has part: feature:193826-193886:-1:exon
so has part: feature:193498-193543:-1:exon

XP_040391273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196688-196828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196265-196377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195203-195270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194910-195002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193826-193886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:193498-193543:-1:exon

RSRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 197322..202177
location: region:197322-202177:1
so has part: feature:197322-202177:1:exon
subclass of: SO_0000010

121059038
type: Gene
SIO_000068: ncbigene

position:197322:1
position: 197322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202177:1
position: 202177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197322-202177:1:exon

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535330.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197322..197409,198682..199302,199650..199804,201062..201145,201653..202177)
location: region:197322-202177:1
so has part: feature:197322-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:201062-201145:1:exon
so has part: feature:201653-202177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197322-197409:1:exon

position:197409:1
position: 197409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

position:198682:1
position: 198682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199302:1
position: 199302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

position:199650:1
position: 199650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199804:1
position: 199804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:201062-201145:1:exon

position:201062:1
position: 201062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201145:1
position: 201145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201653-202177:1:exon

position:201653:1
position: 201653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535337.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197322..197409,198682..199302,199650..199804,200303..200345,201062..201136)
location: region:197322-201136:1
so has part: feature:197322-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:200303-200345:1:exon
so has part: feature:201062-201136:1:exon

position:201136:1
position: 201136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197322-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200303-200345:1:exon

position:200303:1
position: 200303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200345:1
position: 200345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201062-201136:1:exon

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535335.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197322..197409,198682..199302,199650..199804,200303..201079)
location: region:197322-201079:1
so has part: feature:197322-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:200303-201079:1:exon

position:201079:1
position: 201079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197322-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200303-201079:1:exon

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535336.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197322..197409,198682..199302,199650..199804,200303..200345,200577..201079)
location: region:197322-201079:1
so has part: feature:197322-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:200303-200345:1:exon
so has part: feature:200577-201079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197322-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200303-200345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200577-201079:1:exon

position:200577:1
position: 200577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535334.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197322..197409,198682..199302,199650..199804,200577..201079)
location: region:197322-201079:1
so has part: feature:197322-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:200577-201079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197322-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200577-201079:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1 isoform X1
translation: MRVSPAARTPGEVTGRLRVRPAVLGMETGYYRTTIKTESGSESICMEEVMIKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSTRSSSRSSCSSQSSSSTSSSASSRSWSRSRSKSRARRNSSQRYRRSSRSYSRSRSRSCGYMSYRGRYHARHYRRYHRSPRRRSRSRSWSRGRSCYRRSYSRSRSRSRGRRYYGFGRTVYPEAYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGDSGEQPRRLTEDRTKSGMERATTQRSISFSPNNTMAKPVLQRPASHVVKEPSISPGREDDRKGSPYGQWVPVKKEEKKTFVNFSPKCALFRAR
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197337..197409,198682..199302,199650..199804,201062..201145,201653..201838)
location: region:197337-201838:1
so has part: feature:197337-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:201062-201145:1:exon
so has part: feature:201653-201838:1:exon

XP_040391264.1
type: Protein
SIO_000068: ncbiprotein

position:197337:1
position: 197337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201838:1
position: 201838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201062-201145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201653-201838:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1 isoform X3
translation: MRVSPAARTPGEVTGRLRVRPAVLGMETGYYRTTIKTESGSESICMEEVMIKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSTRSSSRSSCSSQSSSSTSSSASSRSWSRSRSKSRARRNSSQRYRRSSRSYSRSRSRSCGYMSYRGRYHARHYRRYHRSPRRRSRSRSWSRGRSCYRRSYSRSRSRSRGRRYYGFGRTVYPEAYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGDSGEMLRDYRRGGLHHLQISLLLLSKALQD
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197337..197409,198682..199302,199650..199804,200577..200657)
location: region:197337-200657:1
so has part: feature:197337-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:200577-200657:1:exon

XP_040391268.1
type: Protein
SIO_000068: ncbiprotein

position:200657:1
position: 200657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200577-200657:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1 isoform X4
translation: MRVSPAARTPGEVTGRLRVRPAVLGMETGYYRTTIKTESGSESICMEEVMIKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSTRSSSRSSCSSQSSSSTSSSASSRSWSRSRSKSRARRNSSQRYRRSSRSYSRSRSRSCGYMSYRGRYHARHYRRYHRSPRRRSRSRSWSRGRSCYRRSYSRSRSRSRGRRYYGFGRTVYPEAYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGDSGEKS
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197337..197409,198682..199302,199650..199804,200303..200311)
location: region:197337-200311:1
so has part: feature:197337-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:200303-200311:1:exon

XP_040391269.1
type: Protein
SIO_000068: ncbiprotein

position:200311:1
position: 200311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200303-200311:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1 isoform X4
translation: MRVSPAARTPGEVTGRLRVRPAVLGMETGYYRTTIKTESGSESICMEEVMIKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSTRSSSRSSCSSQSSSSTSSSASSRSWSRSRSKSRARRNSSQRYRRSSRSYSRSRSRSCGYMSYRGRYHARHYRRYHRSPRRRSRSRSWSRGRSCYRRSYSRSRSRSRGRRYYGFGRTVYPEAYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGDSGEKS
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197337..197409,198682..199302,199650..199804,200303..200311)
location: region:197337-200311:1
so has part: feature:197337-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:200303-200311:1:exon

XP_040391270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200303-200311:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1 isoform X4
translation: MRVSPAARTPGEVTGRLRVRPAVLGMETGYYRTTIKTESGSESICMEEVMIKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSTRSSSRSSCSSQSSSSTSSSASSRSWSRSRSKSRARRNSSQRYRRSSRSYSRSRSRSCGYMSYRGRYHARHYRRYHRSPRRRSRSRSWSRGRSCYRRSYSRSRSRSRGRRYYGFGRTVYPEAYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGDSGEKS
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197337..197409,198682..199302,199650..199804,200303..200311)
location: region:197337-200311:1
so has part: feature:197337-197409:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:200303-200311:1:exon

XP_040391271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200303-200311:1:exon

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535332.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197390..197575,198682..199302,199650..199804,201062..201145,201653..202177)
location: region:197390-202177:1
so has part: feature:197390-197575:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:201062-201145:1:exon
so has part: feature:201653-202177:1:exon

position:197390:1
position: 197390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197390-197575:1:exon

position:197575:1
position: 197575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201062-201145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201653-202177:1:exon

RSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RSRP1
product: arginine and serine rich protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535331.1
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(197685..197913,198682..199302,199650..199804,201062..201145,201653..202177)
location: region:197685-202177:1
so has part: feature:197685-197913:1:exon
so has part: feature:198682-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:201062-201145:1:exon
so has part: feature:201653-202177:1:exon

position:197685:1
position: 197685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197685-197913:1:exon

position:197913:1
position: 197913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198682-199302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201062-201145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201653-202177:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1 isoform X2
translation: METGYYRTTIKTESGSESICMEEVMIKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSTRSSSRSSCSSQSSSSTSSSASSRSWSRSRSKSRARRNSSQRYRRSSRSYSRSRSRSCGYMSYRGRYHARHYRRYHRSPRRRSRSRSWSRGRSCYRRSYSRSRSRSRGRRYYGFGRTVYPEAYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGDSGEQPRRLTEDRTKSGMERATTQRSISFSPNNTMAKPVLQRPASHVVKEPSISPGREDDRKGSPYGQWVPVKKEEKKTFVNFSPKCALFRAR
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(198684..199302,199650..199804,201062..201145,201653..201838)
location: region:198684-201838:1
so has part: feature:198684-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:201062-201145:1:exon
so has part: feature:201653-201838:1:exon

XP_040391265.1
type: Protein
SIO_000068: ncbiprotein

position:198684:1
position: 198684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198684-199302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201062-201145:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201653-201838:1:exon

RSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine/serine-rich protein 1 isoform X2
translation: METGYYRTTIKTESGSESICMEEVMIKKTDDMADFMDDLKLSSPKKRYSCLRSERSCDRSSTRSSSRSSCSSQSSSSTSSSASSRSWSRSRSKSRARRNSSQRYRRSSRSYSRSRSRSCGYMSYRGRYHARHYRRYHRSPRRRSRSRSWSRGRSCYRRSYSRSRSRSRGRRYYGFGRTVYPEAYRNWRSRSQTRSRSRSPLHLSEKEKRELLEIAKANAAKALGTDNIVLPASLKILTPSKETNNIKQEHEDSGDSGEQPRRLTEDRTKSGMERATTQRSISFSPNNTMAKPVLQRPASHVVKEPSISPGREDDRKGSPYGQWVPVKKEEKKTFVNFSPKCALFRAR
SIO_010081: RSRP1
subclass of: SO_0000673
so part of: RSRP1
location: join(198684..199302,199650..199804,201062..201145,201653..201838)
location: region:198684-201838:1
so has part: feature:198684-199302:1:exon
so has part: feature:199650-199804:1:exon
so has part: feature:201062-201145:1:exon
so has part: feature:201653-201838:1:exon

XP_040391266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198684-199302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199650-199804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201062-201145:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201653-201838:1:exon

SYF2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SYF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(203368..>206095)
location: region:203368-206095:-1
so has part: feature:203368-206095:-1:exon
subclass of: SO_0000010

121058918
type: Gene
SIO_000068: ncbigene

position:203368:-1
position: 203368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206095:-1
position: 206095
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203368-206095:-1:exon

SYF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SYF2
product: SYF2 pre-mRNA splicing factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535063.1
SIO_010081: SYF2
subclass of: SO_0000673
so part of: SYF2
location: complement(join(203368..203787,203891..203989,204592..204682,204800..204917,205052..205177,205464..205574,205649..>206095))
location: region:203368-206095:-1
so has part: feature:205649-206095:-1:exon
so has part: feature:205464-205574:-1:exon
so has part: feature:205052-205177:-1:exon
so has part: feature:204800-204917:-1:exon
so has part: feature:204592-204682:-1:exon
so has part: feature:203891-203989:-1:exon
so has part: feature:203368-203787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205649-206095:-1:exon

position:205649:-1
position: 205649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205464-205574:-1:exon

position:205464:-1
position: 205464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205574:-1
position: 205574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205052-205177:-1:exon

position:205052:-1
position: 205052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205177:-1
position: 205177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204800-204917:-1:exon

position:204800:-1
position: 204800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204917:-1
position: 204917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204592-204682:-1:exon

position:204592:-1
position: 204592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204682:-1
position: 204682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:203891-203989:-1:exon

position:203891:-1
position: 203891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203989:-1
position: 203989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:203368-203787:-1:exon

position:203787:-1
position: 203787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SYF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SYF2
translation: CDGCLPGSSERQRRGSGPASNGEDGHSPLPPAPPRHTRHEPTRPTRTCRAPTSAGPAARPRPGPAHPTPPRSAAPGQPRGRGGRREGGGGTRGRSRAPLPPARQGRPRPRHVPGRKCVGRSGSGSVGGANGGGGGGGGGGGGCPAALDGGSSGSEDEARPSPAAAAAAAQKREGWLRKFRELHMKRNEARKLNHQEVVEEDKRLKLPPNWEAKKARLEWELKVEEKKKECAARGEDYERVKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQLRQYQRLTRQIKPDLEQYEKLKEQYGEALYPTSDSLLHGTHVPTKEGIDRMVADLEKQIEKREKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
SIO_010081: SYF2
subclass of: SO_0000673
so part of: SYF2
location: complement(join(203622..203787,203891..203989,204592..204682,204800..204917,205052..205177,205464..205574,205649..>206095))
location: region:203622-206095:-1
so has part: feature:205649-206095:-1:exon
so has part: feature:205464-205574:-1:exon
so has part: feature:205052-205177:-1:exon
so has part: feature:204800-204917:-1:exon
so has part: feature:204592-204682:-1:exon
so has part: feature:203891-203989:-1:exon
so has part: feature:203622-203787:-1:exon

XP_040390997.1
type: Protein
SIO_000068: ncbiprotein

position:203622:-1
position: 203622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205649-206095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205464-205574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205052-205177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204800-204917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204592-204682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203891-203989:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203622-203787:-1:exon

LOC121059002
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 236169..243035
location: region:236169-243035:1
so has part: feature:236169-243035:1:exon
subclass of: SO_0000011

121059002
type: Gene
SIO_000068: ncbigene

position:236169:1
position: 236169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243035:1
position: 243035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236169-243035:1:exon

LOC121059002
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121059002
product: uncharacterized LOC121059002
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814411.1
SIO_010081: LOC121059002
subclass of: SO_0000673
so part of: LOC121059002
location: join(236169..236758,236931..237021,237201..237323,240217..240415,242131..243035)
location: region:236169-243035:1
so has part: feature:236169-236758:1:exon
so has part: feature:236931-237021:1:exon
so has part: feature:237201-237323:1:exon
so has part: feature:240217-240415:1:exon
so has part: feature:242131-243035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236169-236758:1:exon

position:236758:1
position: 236758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236931-237021:1:exon

position:236931:1
position: 236931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237021:1
position: 237021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237201-237323:1:exon

position:237201:1
position: 237201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237323:1
position: 237323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240217-240415:1:exon

position:240217:1
position: 240217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240415:1
position: 240415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:242131-243035:1:exon

position:242131:1
position: 242131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RUNX3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 251942..311781
location: region:251942-311781:1
so has part: feature:251942-311781:1:exon
subclass of: SO_0000010

121058809
type: Gene
SIO_000068: ncbigene

position:251942:1
position: 251942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311781:1
position: 311781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251942-311781:1:exon

RUNX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RUNX3
product: RUNX family transcription factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040534821.1
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(251942..252176,273217..273461,274520..274676,279683..279787,309114..311781)
location: region:251942-311781:1
so has part: feature:251942-252176:1:exon
so has part: feature:273217-273461:1:exon
so has part: feature:274520-274676:1:exon
so has part: feature:279683-279787:1:exon
so has part: feature:309114-311781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251942-252176:1:exon

position:252176:1
position: 252176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273217-273461:1:exon

position:273217:1
position: 273217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273461:1
position: 273461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274520-274676:1:exon

position:274520:1
position: 274520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274676:1
position: 274676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279683-279787:1:exon

position:279683:1
position: 279683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279787:1
position: 279787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:309114-311781:1:exon

position:309114:1
position: 309114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RUNX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RUNX3
product: RUNX family transcription factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040534820.1
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(251962..252176,273217..273461,274520..274676,279683..279787,297392..297556,309114..311781)
location: region:251962-311781:1
so has part: feature:251962-252176:1:exon
so has part: feature:273217-273461:1:exon
so has part: feature:274520-274676:1:exon
so has part: feature:279683-279787:1:exon
so has part: feature:297392-297556:1:exon
so has part: feature:309114-311781:1:exon

position:251962:1
position: 251962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251962-252176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273217-273461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274520-274676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279683-279787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297392-297556:1:exon

position:297392:1
position: 297392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297556:1
position: 297556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309114-311781:1:exon

RUNX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: runt-related transcription factor 3 isoform X1
translation: MASNSIFDSFTTYSSSFLRDPSTSRRFTPPSTAFPCGKMGENSGALGAAAPGARTRPEVRSVVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFADRYGELERLRQSMRVTPTTPSPRGSLSTPSHFGSQAQTPIQGTSDLSPFSDPRQFDRSFPTLPALTETRFSDPRMHYPGAMSAAFPYTATPSATGIGGISMTSMPTTTRFHHTYLPPPYPGSTQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGGERSPTRMLSSCTSASAGNNLMNPSLGNQNDGVDADGSHSNSPTTMTTTGRMDESVWRPY
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(252119..252176,273217..273461,274520..274676,279683..279787,297392..297556,309114..309637)
location: region:252119-309637:1
so has part: feature:252119-252176:1:exon
so has part: feature:273217-273461:1:exon
so has part: feature:274520-274676:1:exon
so has part: feature:279683-279787:1:exon
so has part: feature:297392-297556:1:exon
so has part: feature:309114-309637:1:exon

XP_040390754.1
type: Protein
SIO_000068: ncbiprotein

position:252119:1
position: 252119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309637:1
position: 309637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252119-252176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273217-273461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274520-274676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279683-279787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297392-297556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309114-309637:1:exon

RUNX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RUNX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: runt-related transcription factor 3 isoform X2
translation: MASNSIFDSFTTYSSSFLRDPSTSRRFTPPSTAFPCGKMGENSGALGAAAPGARTRPEVRSVVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRSTSDLSPFSDPRQFDRSFPTLPALTETRFSDPRMHYPGAMSAAFPYTATPSATGIGGISMTSMPTTTRFHHTYLPPPYPGSTQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGGERSPTRMLSSCTSASAGNNLMNPSLGNQNDGVDADGSHSNSPTTMTTTGRMDESVWRPY
SIO_010081: RUNX3
subclass of: SO_0000673
so part of: RUNX3
location: join(252119..252176,273217..273461,274520..274676,279683..279787,309114..309637)
location: region:252119-309637:1
so has part: feature:252119-252176:1:exon
so has part: feature:273217-273461:1:exon
so has part: feature:274520-274676:1:exon
so has part: feature:279683-279787:1:exon
so has part: feature:309114-309637:1:exon

XP_040390755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252119-252176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273217-273461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274520-274676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279683-279787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309114-309637:1:exon

LOC121058810
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309930..330703)
location: region:309930-330703:-1
so has part: feature:309930-330703:-1:exon
subclass of: SO_0000010

121058810
type: Gene
SIO_000068: ncbigene

position:309930:-1
position: 309930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330703:-1
position: 330703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309930-330703:-1:exon

LOC121058810
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121058810
product: uncharacterized LOC121058810, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814362.1
SIO_010081: LOC121058810
so part of: LOC121058810
location: complement(join(309930..312826,313895..314129,328695..328849,329803..330703))
location: region:309930-330703:-1
so has part: feature:329803-330703:-1:exon
so has part: feature:328695-328849:-1:exon
so has part: feature:313895-314129:-1:exon
so has part: feature:309930-312826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329803-330703:-1:exon

position:329803:-1
position: 329803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328695-328849:-1:exon

position:328695:-1
position: 328695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328849:-1
position: 328849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313895-314129:-1:exon

position:313895:-1
position: 313895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314129:-1
position: 314129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309930-312826:-1:exon

position:312826:-1
position: 312826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121058810
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058810
product: uncharacterized LOC121058810, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040534822.1
SIO_010081: LOC121058810
subclass of: SO_0000673
so part of: LOC121058810
location: complement(join(309930..312826,313943..314129,328695..328849,329803..330035))
location: region:309930-330035:-1
so has part: feature:329803-330035:-1:exon
so has part: feature:328695-328849:-1:exon
so has part: feature:313943-314129:-1:exon
so has part: feature:309930-312826:-1:exon

position:330035:-1
position: 330035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329803-330035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328695-328849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313943-314129:-1:exon

position:313943:-1
position: 313943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309930-312826:-1:exon

LOC121058810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121058810
translation: MRPSGEAAHAWAALDAGAAYGRTGRGCPSEWRPTLLPCPWSPRSAELQSRSLLVKLLQEEIEEKASSVSLSSPPPCSEVTVVSAAPQHRPGAQPTPSPAAAAGRSAWPDPTAATCGRSLTCEVTTVVKNLCKMRPQHPQHSGSCAWRVKSWPEPVGMCLSSEEPRAAHCARSGQTAAVAASPGSGPGALGQGPGPSQRNAAPGTCGAAGKE
SIO_010081: LOC121058810
subclass of: SO_0000673
so part of: LOC121058810
location: complement(join(312628..312826,313943..314129,328695..328849,329803..329897))
location: region:312628-329897:-1
so has part: feature:329803-329897:-1:exon
so has part: feature:328695-328849:-1:exon
so has part: feature:313943-314129:-1:exon
so has part: feature:312628-312826:-1:exon

XP_040390756.1
type: Protein
SIO_000068: ncbiprotein

position:312628:-1
position: 312628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329897:-1
position: 329897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329803-329897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328695-328849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313943-314129:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312628-312826:-1:exon

LOC121058810
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: LOC121058810
product: uncharacterized LOC121058810, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814363.1
SIO_010081: LOC121058810
so part of: LOC121058810
location: complement(join(322642..323813,328695..328849,329803..330703))
location: region:322642-330703:-1
so has part: feature:329803-330703:-1:exon
so has part: feature:328695-328849:-1:exon
so has part: feature:322642-323813:-1:exon

position:322642:-1
position: 322642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329803-330703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328695-328849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322642-323813:-1:exon

position:323813:-1
position: 323813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLIC4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(350009..375733)
location: region:350009-375733:-1
so has part: feature:350009-375733:-1:exon
subclass of: SO_0000010

121058795
type: Gene
SIO_000068: ncbigene

position:350009:-1
position: 350009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375733:-1
position: 375733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350009-375733:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 251 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534786.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,375562..375733))
location: region:350009-375733:-1
so has part: feature:375562-375733:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375562-375733:-1:exon

position:375562:-1
position: 375562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

position:360111:-1
position: 360111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360220:-1
position: 360220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

position:354422:-1
position: 354422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354547:-1
position: 354547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

position:353002:-1
position: 353002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353108:-1
position: 353108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

position:351471:-1
position: 351471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351652:-1
position: 351652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:350009-350686:-1:exon

position:350686:-1
position: 350686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040534788.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,374953..375134))
location: region:350009-375134:-1
so has part: feature:374953-375134:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:375134:-1
position: 375134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374953-375134:-1:exon

position:374953:-1
position: 374953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040534794.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,374924..374941))
location: region:350009-374941:-1
so has part: feature:374924-374941:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:374941:-1
position: 374941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374924-374941:-1:exon

position:374924:-1
position: 374924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040534785.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,360384..360444,373641..373666))
location: region:350009-373666:-1
so has part: feature:373641-373666:-1:exon
so has part: feature:360384-360444:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:373666:-1
position: 373666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373641-373666:-1:exon

position:373641:-1
position: 373641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360384-360444:-1:exon

position:360384:-1
position: 360384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360444:-1
position: 360444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534789.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,373641..373658))
location: region:350009-373658:-1
so has part: feature:373641-373658:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:373658:-1
position: 373658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373641-373658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040534795.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,373353..373370))
location: region:350009-373370:-1
so has part: feature:373353-373370:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:373370:-1
position: 373370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373353-373370:-1:exon

position:373353:-1
position: 373353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040534790.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,370841..370858))
location: region:350009-370858:-1
so has part: feature:370841-370858:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:370858:-1
position: 370858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370841-370858:-1:exon

position:370841:-1
position: 370841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040534791.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,368628..368645))
location: region:350009-368645:-1
so has part: feature:368628-368645:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:368645:-1
position: 368645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368628-368645:-1:exon

position:368628:-1
position: 368628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040534787.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,360384..360444,361883..361957))
location: region:350009-361957:-1
so has part: feature:361883-361957:-1:exon
so has part: feature:360384-360444:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:361957:-1
position: 361957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361883-361957:-1:exon

position:361883:-1
position: 361883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360384-360444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CLIC4
product: chloride intracellular channel 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040534792.1
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350009..350686,351471..351652,353002..353108,354422..354547,360111..360220,361883..361900))
location: region:350009-361900:-1
so has part: feature:361883-361900:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350009-350686:-1:exon

position:361900:-1
position: 361900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361883-361900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350009-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X2
translation: MALSVPVNGLKEGDKEPVIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360220,375562..375633))
location: region:350522-375633:-1
so has part: feature:375562-375633:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390720.1
type: Protein
SIO_000068: ncbiprotein

position:350522:-1
position: 350522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375633:-1
position: 375633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375562-375633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X1
translation: MKQRCIGWTLRRKECSCKMTLGLTAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360220,360384..360444,373641..373651))
location: region:350522-373651:-1
so has part: feature:373641-373651:-1:exon
so has part: feature:360384-360444:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390719.1
type: Protein
SIO_000068: ncbiprotein

position:373651:-1
position: 373651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373641-373651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360384-360444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X3
translation: MTLGLTAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360220,360384..360401))
location: region:350522-360401:-1
so has part: feature:360384-360401:-1:exon
so has part: feature:360111-360220:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390721.1
type: Protein
SIO_000068: ncbiprotein

position:360401:-1
position: 360401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360384-360401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360111-360220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X4
translation: MILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360166))
location: region:350522-360166:-1
so has part: feature:360111-360166:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390722.1
type: Protein
SIO_000068: ncbiprotein

position:360166:-1
position: 360166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360111-360166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X4
translation: MILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360166))
location: region:350522-360166:-1
so has part: feature:360111-360166:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360111-360166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X4
translation: MILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360166))
location: region:350522-360166:-1
so has part: feature:360111-360166:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360111-360166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X4
translation: MILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360166))
location: region:350522-360166:-1
so has part: feature:360111-360166:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360111-360166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X4
translation: MILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360166))
location: region:350522-360166:-1
so has part: feature:360111-360166:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360111-360166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X4
translation: MILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360166))
location: region:350522-360166:-1
so has part: feature:360111-360166:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360111-360166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350522-350686:-1:exon

CLIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CLIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloride intracellular channel protein 4 isoform X4
translation: MILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITYNGEVKTDVNKIEEFLEEVLAPPKYLKLSPKHPESNTAGMDIFAKFSAFIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDITISTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLTNAYSRDEFTNTCPGDKEIEIAYSDVAKRLTK
SIO_010081: CLIC4
subclass of: SO_0000673
so part of: CLIC4
location: complement(join(350522..350686,351471..351652,353002..353108,354422..354547,360111..360166))
location: region:350522-360166:-1
so has part: feature:360111-360166:-1:exon
so has part: feature:354422-354547:-1:exon
so has part: feature:353002-353108:-1:exon
so has part: feature:351471-351652:-1:exon
so has part: feature:350522-350686:-1:exon

XP_040390729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360111-360166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354422-354547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353002-353108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351471-351652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350522-350686:-1:exon

SRRM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(391913..410141)
location: region:391913-410141:-1
so has part: feature:391913-410141:-1:exon
subclass of: SO_0000010

121058780
type: Gene
SIO_000068: ncbigene

position:391913:-1
position: 391913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410141:-1
position: 410141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391913-410141:-1:exon

SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 122 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534743.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(391913..392894,393112..393306,394067..394253,395172..395630,395969..396073,398365..398509,399118..399204,399546..399626,399772..400043,401548..401649,402214..402417,402902..403102,403527..403639,403853..404023,406109..406231,407722..407811,409943..410141))
location: region:391913-410141:-1
so has part: feature:409943-410141:-1:exon
so has part: feature:407722-407811:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:403853-404023:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401649:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:391913-392894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409943-410141:-1:exon

position:409943:-1
position: 409943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407722-407811:-1:exon

position:407722:-1
position: 407722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407811:-1
position: 407811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:406109-406231:-1:exon

position:406109:-1
position: 406109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406231:-1
position: 406231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040534740.1
SIO_010081: SRRM1
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SIO_000628: feature:391913-392894:-1:exon

SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040534739.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
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location: region:391913-410141:-1
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 163 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534741.1
SIO_010081: SRRM1
subclass of: SO_0000673
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location: region:391913-410141:-1
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040534738.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(391913..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..404023,406109..406231,407722..407811,409943..410141))
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SIO_000300: 1
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 503 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534742.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
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urn:…
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SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040534747.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(391913..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..404023,405695..405823,406109..406231,407722..407812))
location: region:391913-407812:-1
so has part: feature:407722-407812:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:405695-405823:-1:exon
so has part: feature:403853-404023:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401667:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:391913-392894:-1:exon

position:407812:-1
position: 407812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407722-407812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405695-405823:-1:exon

position:405695:-1
position: 405695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405823:-1
position: 405823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:403853-404023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401548-401667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:391913-392894:-1:exon

SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040534745.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(391913..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..404876,405695..405823,406109..406231,407722..407812))
location: region:391913-407812:-1
so has part: feature:407722-407812:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:405695-405823:-1:exon
so has part: feature:403853-404876:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401667:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:391913-392894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407722-407812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405695-405823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403853-404876:-1:exon

position:404876:-1
position: 404876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401548-401667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:391913-392894:-1:exon

SRRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRRM1
product: serine and arginine repetitive matrix 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040534744.1
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(391913..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..405823,406109..406231,407722..407812))
location: region:391913-407812:-1
so has part: feature:407722-407812:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:403853-405823:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401667:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:391913-392894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407722-407812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403853-405823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401548-401667:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:391913-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X6
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,398365..398509,399118..399204,399546..399626,399772..400043,401548..401649,402214..402417,402902..403102,403527..403639,403853..404023,406109..406231,407722..407811,409943..409963))
location: region:392790-409963:-1
so has part: feature:409943-409963:-1:exon
so has part: feature:407722-407811:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:403853-404023:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401649:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390677.1
type: Protein
SIO_000068: ncbiprotein

position:392790:-1
position: 392790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409963:-1
position: 409963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409943-409963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407722-407811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403853-404023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401548-401649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392790-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X3
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401649,402214..402417,402902..403102,403527..403639,403853..404023,406109..406231,407722..407811,409943..409963))
location: region:392790-409963:-1
so has part: feature:409943-409963:-1:exon
so has part: feature:407722-407811:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:403853-404023:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401649:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409943-409963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407722-407811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403853-404023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401548-401649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392790-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X5
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,398365..398509,399118..399204,399546..399626,399772..400043,401548..401652,402214..402417,402902..403102,403527..403639,403853..404023,406109..406231,407722..407811,409943..409963))
location: region:392790-409963:-1
so has part: feature:409943-409963:-1:exon
so has part: feature:407722-407811:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:403853-404023:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401652:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409943-409963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407722-407811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403853-404023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401548-401652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392790-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X2
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401652,402214..402417,402902..403102,403527..403639,403853..404023,406109..406231,407722..407811,409943..409963))
location: region:392790-409963:-1
so has part: feature:409943-409963:-1:exon
so has part: feature:407722-407811:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:403853-404023:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401652:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409943-409963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407722-407811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403853-404023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401548-401652:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392790-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X4
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..404023,406109..406231,407722..407811,409943..409963))
location: region:392790-409963:-1
so has part: feature:409943-409963:-1:exon
so has part: feature:407722-407811:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:403853-404023:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401667:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409943-409963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407722-407811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403853-404023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401548-401667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392790-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X1
translation: MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..404023,406109..406231,407722..407811,409943..409963))
location: region:392790-409963:-1
so has part: feature:409943-409963:-1:exon
so has part: feature:407722-407811:-1:exon
so has part: feature:406109-406231:-1:exon
so has part: feature:403853-404023:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401667:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409943-409963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407722-407811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406109-406231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403853-404023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401548-401667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392790-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X7
translation: MMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..404008))
location: region:392790-404008:-1
so has part: feature:403853-404008:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401667:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390678.1
type: Protein
SIO_000068: ncbiprotein

position:404008:-1
position: 404008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403853-404008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:401548-401667:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392790-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X7
translation: MMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..404008))
location: region:392790-404008:-1
so has part: feature:403853-404008:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401667:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403853-404008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:401548-401667:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392790-392894:-1:exon

SRRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 1 isoform X7
translation: MMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNSDIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAAADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
SIO_010081: SRRM1
subclass of: SO_0000673
so part of: SRRM1
location: complement(join(392790..392894,393112..393306,394067..394253,395172..395630,395969..396073,397767..397808,398365..398509,399118..399204,399546..399626,399772..400043,401548..401667,402214..402417,402902..403102,403527..403639,403853..404008))
location: region:392790-404008:-1
so has part: feature:403853-404008:-1:exon
so has part: feature:403527-403639:-1:exon
so has part: feature:402902-403102:-1:exon
so has part: feature:402214-402417:-1:exon
so has part: feature:401548-401667:-1:exon
so has part: feature:399772-400043:-1:exon
so has part: feature:399546-399626:-1:exon
so has part: feature:399118-399204:-1:exon
so has part: feature:398365-398509:-1:exon
so has part: feature:397767-397808:-1:exon
so has part: feature:395969-396073:-1:exon
so has part: feature:395172-395630:-1:exon
so has part: feature:394067-394253:-1:exon
so has part: feature:393112-393306:-1:exon
so has part: feature:392790-392894:-1:exon

XP_040390681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403853-404008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403527-403639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402902-403102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402214-402417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:401548-401667:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399772-400043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399546-399626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399118-399204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398365-398509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397767-397808:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395969-396073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:395172-395630:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:394067-394253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:393112-393306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392790-392894:-1:exon

LOC121058871
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(412529..425716)
location: region:412529-425716:-1
so has part: feature:412529-425716:-1:exon
subclass of: SO_0000010

121058871
type: Gene
SIO_000068: ncbigene

position:412529:-1
position: 412529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425716:-1
position: 425716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412529-425716:-1:exon

LOC121058871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058871
product: non-compact myelin associated protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040534984.1
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(412529..413302,413813..413897,414291..414385,425184..425716))
location: region:412529-425716:-1
so has part: feature:425184-425716:-1:exon
so has part: feature:414291-414385:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:412529-413302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425184-425716:-1:exon

position:425184:-1
position: 425184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414291-414385:-1:exon

position:414291:-1
position: 414291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414385:-1
position: 414385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413813-413897:-1:exon

position:413813:-1
position: 413813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413897:-1
position: 413897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412529-413302:-1:exon

position:413302:-1
position: 413302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121058871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058871
product: non-compact myelin associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040534982.1
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(412529..413302,413813..413897,414291..414385,416985..417108,425184..425716))
location: region:412529-425716:-1
so has part: feature:425184-425716:-1:exon
so has part: feature:416985-417108:-1:exon
so has part: feature:414291-414385:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:412529-413302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425184-425716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416985-417108:-1:exon

position:416985:-1
position: 416985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417108:-1
position: 417108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414291-414385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412529-413302:-1:exon

LOC121058871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058871
product: non-compact myelin associated protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040534986.1
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(412529..413302,413813..413897,414291..414385,424776..425151))
location: region:412529-425151:-1
so has part: feature:424776-425151:-1:exon
so has part: feature:414291-414385:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:412529-413302:-1:exon

position:425151:-1
position: 425151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424776-425151:-1:exon

position:424776:-1
position: 424776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414291-414385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412529-413302:-1:exon

LOC121058871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058871
product: non-compact myelin associated protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040534983.1
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(412529..413302,413813..413897,414291..414385,416985..417108,419564..421012))
location: region:412529-421012:-1
so has part: feature:419564-421012:-1:exon
so has part: feature:416985-417108:-1:exon
so has part: feature:414291-414385:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:412529-413302:-1:exon

position:421012:-1
position: 421012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419564-421012:-1:exon

position:419564:-1
position: 419564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416985-417108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414291-414385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412529-413302:-1:exon

LOC121058871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058871
product: non-compact myelin associated protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040534987.1
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(412529..413302,413813..413897,414291..414385,414495..416213))
location: region:412529-416213:-1
so has part: feature:414495-416213:-1:exon
so has part: feature:414291-414385:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:412529-413302:-1:exon

position:416213:-1
position: 416213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414495-416213:-1:exon

position:414495:-1
position: 414495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414291-414385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412529-413302:-1:exon

LOC121058871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRHMRVKRELEPKSTKTAMPPALGQNSDSVIQHPAVTFIPVDIHMQSRQL
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(413155..413302,413813..413897,414291..414375))
location: region:413155-414375:-1
so has part: feature:414291-414375:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:413155-413302:-1:exon

XP_040390916.1
type: Protein
SIO_000068: ncbiprotein

position:413155:-1
position: 413155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414375:-1
position: 414375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414291-414375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413155-413302:-1:exon

LOC121058871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRHMRVKRELEPKSTKTAMPPALGQNSDSVIQHPAVTFIPVDIHMQSRQL
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(413155..413302,413813..413897,414291..414375))
location: region:413155-414375:-1
so has part: feature:414291-414375:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:413155-413302:-1:exon

XP_040390917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414291-414375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413155-413302:-1:exon

LOC121058871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRHMRVKRELEPKSTKTAMPPALGQNSDSVIQHPAVTFIPVDIHMQSRQL
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(413155..413302,413813..413897,414291..414375))
location: region:413155-414375:-1
so has part: feature:414291-414375:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:413155-413302:-1:exon

XP_040390918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414291-414375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413155-413302:-1:exon

LOC121058871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRHMRVKRELEPKSTKTAMPPALGQNSDSVIQHPAVTFIPVDIHMQSRQL
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(413155..413302,413813..413897,414291..414375))
location: region:413155-414375:-1
so has part: feature:414291-414375:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:413155-413302:-1:exon

XP_040390920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414291-414375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413155-413302:-1:exon

LOC121058871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: noncompact myelin-associated protein
translation: MTTAAPLINNTQFSLNVTTKSQEQSLYQSSGAIVAAIVVGVIIIFTVVLLILKTYNRHMRVKRELEPKSTKTAMPPALGQNSDSVIQHPAVTFIPVDIHMQSRQL
SIO_010081: LOC121058871
subclass of: SO_0000673
so part of: LOC121058871
location: complement(join(413155..413302,413813..413897,414291..414375))
location: region:413155-414375:-1
so has part: feature:414291-414375:-1:exon
so has part: feature:413813-413897:-1:exon
so has part: feature:413155-413302:-1:exon

XP_040390921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414291-414375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413813-413897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413155-413302:-1:exon

LOC121058872
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 426810..428836
location: region:426810-428836:1
so has part: feature:426810-428836:1:exon
subclass of: SO_0000011

121058872
type: Gene
SIO_000068: ncbigene

position:426810:1
position: 426810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428836:1
position: 428836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426810-428836:1:exon

LOC121058872
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058872
product: uncharacterized LOC121058872
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814382.1
SIO_010081: LOC121058872
subclass of: SO_0000673
so part of: LOC121058872
location: join(426810..426970,427243..428836)
location: region:426810-428836:1
so has part: feature:426810-426970:1:exon
so has part: feature:427243-428836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426810-426970:1:exon

position:426970:1
position: 426970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427243-428836:1:exon

position:427243:1
position: 427243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RCAN3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RCAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(427818..439209)
location: region:427818-439209:-1
so has part: feature:427818-439209:-1:exon
subclass of: SO_0000010

121058870
type: Gene
SIO_000068: ncbigene

position:427818:-1
position: 427818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439209:-1
position: 439209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427818-439209:-1:exon

RCAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RCAN3
product: RCAN family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534981.1
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(427818..429935,430650..430821,431396..431569,434108..434352,439080..439209))
location: region:427818-439209:-1
so has part: feature:439080-439209:-1:exon
so has part: feature:434108-434352:-1:exon
so has part: feature:431396-431569:-1:exon
so has part: feature:430650-430821:-1:exon
so has part: feature:427818-429935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439080-439209:-1:exon

position:439080:-1
position: 439080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434108-434352:-1:exon

position:434108:-1
position: 434108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434352:-1
position: 434352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:431396-431569:-1:exon

position:431396:-1
position: 431396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431569:-1
position: 431569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430650-430821:-1:exon

position:430650:-1
position: 430650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430821:-1
position: 430821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427818-429935:-1:exon

position:429935:-1
position: 429935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RCAN3
product: RCAN family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040534980.1
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(427818..429935,430650..430821,431396..431569,434108..434352,435384..435442))
location: region:427818-435442:-1
so has part: feature:435384-435442:-1:exon
so has part: feature:434108-434352:-1:exon
so has part: feature:431396-431569:-1:exon
so has part: feature:430650-430821:-1:exon
so has part: feature:427818-429935:-1:exon

position:435442:-1
position: 435442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435384-435442:-1:exon

position:435384:-1
position: 435384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434108-434352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431396-431569:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430650-430821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427818-429935:-1:exon

RCAN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RCAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcipressin-3
translation: MLRDTMKSWSDSQSDLYSSDQEEEEQMIFGENEDDLEEMMDLSDLPTSLFACSVHEAVFEVQEEKERFEALFTVYDNQVTFQSFKSFRRVRINFSNPEAAARARIELHETDFNGKKLKLYFAQVQVSNEVGNKSYLLPPQPVKQFLISPPASPPVGWKQSEDATPLINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEDEIKNPKQKIMQTRRPEPPATILNESKAFDCTLEVGGTMHC
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(429727..429935,430650..430821,431396..431569,434108..434302))
location: region:429727-434302:-1
so has part: feature:434108-434302:-1:exon
so has part: feature:431396-431569:-1:exon
so has part: feature:430650-430821:-1:exon
so has part: feature:429727-429935:-1:exon

XP_040390914.1
type: Protein
SIO_000068: ncbiprotein

position:429727:-1
position: 429727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434302:-1
position: 434302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434108-434302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431396-431569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430650-430821:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429727-429935:-1:exon

RCAN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RCAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcipressin-3
translation: MLRDTMKSWSDSQSDLYSSDQEEEEQMIFGENEDDLEEMMDLSDLPTSLFACSVHEAVFEVQEEKERFEALFTVYDNQVTFQSFKSFRRVRINFSNPEAAARARIELHETDFNGKKLKLYFAQVQVSNEVGNKSYLLPPQPVKQFLISPPASPPVGWKQSEDATPLINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEDEIKNPKQKIMQTRRPEPPATILNESKAFDCTLEVGGTMHC
SIO_010081: RCAN3
subclass of: SO_0000673
so part of: RCAN3
location: complement(join(429727..429935,430650..430821,431396..431569,434108..434302))
location: region:429727-434302:-1
so has part: feature:434108-434302:-1:exon
so has part: feature:431396-431569:-1:exon
so has part: feature:430650-430821:-1:exon
so has part: feature:429727-429935:-1:exon

XP_040390915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434108-434302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431396-431569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430650-430821:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429727-429935:-1:exon

LOC121058837
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 439373..447907
location: region:439373-447907:1
so has part: feature:439373-447907:1:exon
subclass of: SO_0000011

121058837
type: Gene
SIO_000068: ncbigene

position:439373:1
position: 439373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447907:1
position: 447907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439373-447907:1:exon

LOC121058837
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058837
product: uncharacterized LOC121058837
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005814374.1
SIO_010081: LOC121058837
subclass of: SO_0000673
so part of: LOC121058837
location: join(439373..439940,447648..447907)
location: region:439373-447907:1
so has part: feature:439373-439940:1:exon
so has part: feature:447648-447907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439373-439940:1:exon

position:439940:1
position: 439940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447648-447907:1:exon

position:447648:1
position: 447648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NIPAL3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(440616..455203)
location: region:440616-455203:-1
so has part: feature:440616-455203:-1:exon
subclass of: SO_0000010

121058836
type: Gene
SIO_000068: ncbigene

position:440616:-1
position: 440616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455203:-1
position: 455203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440616-455203:-1:exon

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040534897.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(440616..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453369,455064..455203))
location: region:440616-455203:-1
so has part: feature:455064-455203:-1:exon
so has part: feature:453121-453369:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:440616-444892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455064-455203:-1:exon

position:455064:-1
position: 455064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453121-453369:-1:exon

position:453121:-1
position: 453121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453369:-1
position: 453369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451220-451288:-1:exon

position:451220:-1
position: 451220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451288:-1
position: 451288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450950-451121:-1:exon

position:450950:-1
position: 450950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451121:-1
position: 451121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450792-450851:-1:exon

position:450792:-1
position: 450792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450851:-1
position: 450851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:449960-450105:-1:exon

position:449960:-1
position: 449960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450105:-1
position: 450105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:449127-449223:-1:exon

position:449127:-1
position: 449127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449223:-1
position: 449223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:448759-448894:-1:exon

position:448759:-1
position: 448759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448894:-1
position: 448894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:448017-448105:-1:exon

position:448017:-1
position: 448017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448105:-1
position: 448105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:446733-446796:-1:exon

position:446733:-1
position: 446733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446796:-1
position: 446796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:445558-445652:-1:exon

position:445558:-1
position: 445558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445652:-1
position: 445652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:440616-444892:-1:exon

position:444892:-1
position: 444892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040534894.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(440616..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453527,455064..455203))
location: region:440616-455203:-1
so has part: feature:455064-455203:-1:exon
so has part: feature:453121-453527:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:440616-444892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455064-455203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453121-453527:-1:exon

position:453527:-1
position: 453527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440616-444892:-1:exon

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040534898.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(440616..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453527,454297..454359))
location: region:440616-454359:-1
so has part: feature:454297-454359:-1:exon
so has part: feature:453121-453527:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:440616-444892:-1:exon

position:454359:-1
position: 454359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454297-454359:-1:exon

position:454297:-1
position: 454297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453121-453527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440616-444892:-1:exon

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040534899.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(440616..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450081,450792..450851,450950..451121,451220..451288,453121..453527,454117..454270))
location: region:440616-454270:-1
so has part: feature:454117-454270:-1:exon
so has part: feature:453121-453527:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450081:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:440616-444892:-1:exon

position:454270:-1
position: 454270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454117-454270:-1:exon

position:454117:-1
position: 454117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453121-453527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449960-450081:-1:exon

position:450081:-1
position: 450081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440616-444892:-1:exon

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534893.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(440616..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453527,454117..454270))
location: region:440616-454270:-1
so has part: feature:454117-454270:-1:exon
so has part: feature:453121-453527:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:440616-444892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454117-454270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453121-453527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440616-444892:-1:exon

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040534895.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(440616..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453369,454117..454264))
location: region:440616-454264:-1
so has part: feature:454117-454264:-1:exon
so has part: feature:453121-453369:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:440616-444892:-1:exon

position:454264:-1
position: 454264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454117-454264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453121-453369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440616-444892:-1:exon

NIPAL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534900.1
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(442872..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453074..453211))
location: region:442872-453211:-1
so has part: feature:453074-453211:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:442872-444892:-1:exon

position:442872:-1
position: 442872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453211:-1
position: 453211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453074-453211:-1:exon

position:453074:-1
position: 453074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:442872-444892:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X2
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLSCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIVFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSIPFEPYISMDAMPGMQNMHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(444693..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450081,450792..450851,450950..451121,451220..451288,453121..453219))
location: region:444693-453219:-1
so has part: feature:453121-453219:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450081:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:444693-444892:-1:exon

XP_040390833.1
type: Protein
SIO_000068: ncbiprotein

position:444693:-1
position: 444693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453219:-1
position: 453219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453121-453219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449960-450081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444693-444892:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIVFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSIPFEPYISMDAMPGMQNMHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(444693..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453219))
location: region:444693-453219:-1
so has part: feature:453121-453219:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:444693-444892:-1:exon

XP_040390827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453121-453219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444693-444892:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIVFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSIPFEPYISMDAMPGMQNMHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(444693..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453219))
location: region:444693-453219:-1
so has part: feature:453121-453219:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:444693-444892:-1:exon

XP_040390828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453121-453219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444693-444892:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIVFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSIPFEPYISMDAMPGMQNMHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(444693..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453219))
location: region:444693-453219:-1
so has part: feature:453121-453219:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:444693-444892:-1:exon

XP_040390829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453121-453219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444693-444892:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIVFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSIPFEPYISMDAMPGMQNMHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(444693..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453219))
location: region:444693-453219:-1
so has part: feature:453121-453219:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:444693-444892:-1:exon

XP_040390831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453121-453219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444693-444892:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X1
translation: MEGGNSPNLQLQQLPLATAAVSVQPHTDSFSYKENLIGALLAIFGHLVISIALNLQKYSHIRLAGSKDPRAYFKTKTWWCGLFLLVLGELGVFSSYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAIIGTYLLITFGPNSHEKMTGENITRHLVSWPFLLYMLLEIIVFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSIPFEPYISMDAMPGMQNMHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(444693..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453219))
location: region:444693-453219:-1
so has part: feature:453121-453219:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:444693-444892:-1:exon

XP_040390832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453121-453219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444693-444892:-1:exon

NIPAL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NIPAL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIPA-like protein 3 isoform X3
translation: MTGENITRHLVSWPFLLYMLLEIIVFCLLLYFYKEKNANYIVVILLLVALLGSMTVVTVKAVAGMIVVSIQGNLQLDYPIFYIMLVCMIATAVFQATFLAQASQLYDSSQIASIGYILSTTIAITAGATFYLDFTGEDVLHICMFALGCLIAFLGVFLITRNRKKSIPFEPYISMDAMPGMQNMHDKGIAVQPDLKASFSYGALENNDNMPEIYTPATLPIVQEQHGSRGVSAPPYRVLEHSKKE
SIO_010081: NIPAL3
subclass of: SO_0000673
so part of: NIPAL3
location: complement(join(444693..444892,445558..445652,446733..446796,448017..448105,448759..448894,449127..449223,449960..450016))
location: region:444693-450016:-1
so has part: feature:449960-450016:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:448017-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:444693-444892:-1:exon

XP_040390834.1
type: Protein
SIO_000068: ncbiprotein

position:450016:-1
position: 450016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449960-450016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448017-448105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444693-444892:-1:exon

NIPAL3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: NIPAL3
product: NIPA like domain containing 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005814373.1
SIO_010081: NIPAL3
so part of: NIPAL3
location: complement(join(444830..444892,445558..445652,446733..446796,447936..448105,448759..448894,449127..449223,449960..450105,450792..450851,450950..451121,451220..451288,453121..453527,454117..454271))
location: region:444830-454271:-1
so has part: feature:454117-454271:-1:exon
so has part: feature:453121-453527:-1:exon
so has part: feature:451220-451288:-1:exon
so has part: feature:450950-451121:-1:exon
so has part: feature:450792-450851:-1:exon
so has part: feature:449960-450105:-1:exon
so has part: feature:449127-449223:-1:exon
so has part: feature:448759-448894:-1:exon
so has part: feature:447936-448105:-1:exon
so has part: feature:446733-446796:-1:exon
so has part: feature:445558-445652:-1:exon
so has part: feature:444830-444892:-1:exon

position:444830:-1
position: 444830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454271:-1
position: 454271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454117-454271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453121-453527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451220-451288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450950-451121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450792-450851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449960-450105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449127-449223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448759-448894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447936-448105:-1:exon

position:447936:-1
position: 447936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:446733-446796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445558-445652:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444830-444892:-1:exon

STPG1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: STPG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 455099..466448
location: region:455099-466448:1
so has part: feature:455099-466448:1:exon
subclass of: SO_0000010

121059052
type: Gene
SIO_000068: ncbigene

position:455099:1
position: 455099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466448:1
position: 466448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455099-466448:1:exon

STPG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: STPG1
product: sperm tail PG-rich repeat containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040535416.1
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(455099..455363,455665..455768,457951..458052,458835..459163,461559..461604,461688..461799,462501..462666,464119..466448)
location: region:455099-466448:1
so has part: feature:455099-455363:1:exon
so has part: feature:455665-455768:1:exon
so has part: feature:457951-458052:1:exon
so has part: feature:458835-459163:1:exon
so has part: feature:461559-461604:1:exon
so has part: feature:461688-461799:1:exon
so has part: feature:462501-462666:1:exon
so has part: feature:464119-466448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455099-455363:1:exon

position:455363:1
position: 455363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455665-455768:1:exon

position:455665:1
position: 455665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455768:1
position: 455768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457951-458052:1:exon

position:457951:1
position: 457951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458052:1
position: 458052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:458835-459163:1:exon

position:458835:1
position: 458835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459163:1
position: 459163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:461559-461604:1:exon

position:461559:1
position: 461559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461604:1
position: 461604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461688-461799:1:exon

position:461688:1
position: 461688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461799:1
position: 461799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:462501-462666:1:exon

position:462501:1
position: 462501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462666:1
position: 462666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:464119-466448:1:exon

position:464119:1
position: 464119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STPG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: STPG1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:455751..455753,aa:OTHER)
product: LOW QUALITY PROTEIN: O(6)-methylguanine-induced apoptosis 2
translation: MSGSNIDPDPMKCRWFCHDTAVTLCGWRTRLASTPASRQLQRSQDEAFERRPVPAERGASRVAPGRTAPEFGRTQRPWPLSSGSEFGEGFQISSSPYKHHCKVISNSEKKGFNSQSKXFQYNQSENPGPGFYNVTHQSPGINSTSLSKKGTGYFPSLVPRTARKKISSYPAANAYNSLSYFQSRRDFSVGNSRVFQQPVSRKTEKIPTPAPNQYHVRRFGREDKAGSRAQLTCNAGEVMFDVPGDAMKFQKTQELAVTELVWVQLSSCIIRIIHDGDNWILNTSMDFCKQSNNVSAHAVFVSQTTRGLNLEKIGKWPSPCHYNISDSLTKVSPKGITPCFKSKTSRLTRTDRITAEHTIYQPHKPTREAKKTPFNQKFCLMLCAPAIPPCKDPPFPGPGQYNLVDYRGSPKQNCSSAVFVSNTEQWMGSGSQEGFPGPGKNKNYSEVLLTARDVRPTNVTKQHYCPFNRKETKHRNWRAHLQRHIDT
SIO_010081: STPG1
subclass of: SO_0000673
so part of: STPG1
location: join(455099..455363,455665..455768,457951..458052,458835..459163,461559..461604,461688..461799,462501..462666,464119..464458)
location: region:455099-464458:1
so has part: feature:455099-455363:1:exon
so has part: feature:455665-455768:1:exon
so has part: feature:457951-458052:1:exon
so has part: feature:458835-459163:1:exon
so has part: feature:461559-461604:1:exon
so has part: feature:461688-461799:1:exon
so has part: feature:462501-462666:1:exon
so has part: feature:464119-464458:1:exon

XP_040391350.1
type: Protein
SIO_000068: ncbiprotein

position:464458:1
position: 464458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455099-455363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455665-455768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457951-458052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458835-459163:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461559-461604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461688-461799:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462501-462666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:464119-464458:1:exon

GRHL3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GRHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(469801..508992)
location: region:469801-508992:-1
so has part: feature:469801-508992:-1:exon
subclass of: SO_0000010

121058957
type: Gene
SIO_000068: ncbigene

position:469801:-1
position: 469801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508992:-1
position: 508992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469801-508992:-1:exon

GRHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GRHL3
product: grainyhead like transcription factor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535159.1
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(469801..470688,474522..474586,475741..475826,475971..476059,476782..476816,477701..477834,478245..478323,478928..479086,480864..480958,481659..481770,482745..482898,484754..484833,485135..485471,487062..487123,487830..488016,508974..508992))
location: region:469801-508992:-1
so has part: feature:508974-508992:-1:exon
so has part: feature:487830-488016:-1:exon
so has part: feature:487062-487123:-1:exon
so has part: feature:485135-485471:-1:exon
so has part: feature:484754-484833:-1:exon
so has part: feature:482745-482898:-1:exon
so has part: feature:481659-481770:-1:exon
so has part: feature:480864-480958:-1:exon
so has part: feature:478928-479086:-1:exon
so has part: feature:478245-478323:-1:exon
so has part: feature:477701-477834:-1:exon
so has part: feature:476782-476816:-1:exon
so has part: feature:475971-476059:-1:exon
so has part: feature:475741-475826:-1:exon
so has part: feature:474522-474586:-1:exon
so has part: feature:469801-470688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508974-508992:-1:exon

position:508974:-1
position: 508974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487830-488016:-1:exon

position:487830:-1
position: 487830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488016:-1
position: 488016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:487062-487123:-1:exon

position:487062:-1
position: 487062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487123:-1
position: 487123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:485135-485471:-1:exon

position:485135:-1
position: 485135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485471:-1
position: 485471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484754-484833:-1:exon

position:484754:-1
position: 484754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484833:-1
position: 484833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:482745-482898:-1:exon

position:482745:-1
position: 482745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482898:-1
position: 482898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:481659-481770:-1:exon

position:481659:-1
position: 481659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481770:-1
position: 481770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:480864-480958:-1:exon

position:480864:-1
position: 480864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480958:-1
position: 480958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:478928-479086:-1:exon

position:478928:-1
position: 478928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479086:-1
position: 479086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:478245-478323:-1:exon

position:478245:-1
position: 478245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478323:-1
position: 478323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:477701-477834:-1:exon

position:477701:-1
position: 477701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477834:-1
position: 477834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:476782-476816:-1:exon

position:476782:-1
position: 476782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476816:-1
position: 476816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:475971-476059:-1:exon

position:475971:-1
position: 475971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476059:-1
position: 476059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:475741-475826:-1:exon

position:475741:-1
position: 475741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475826:-1
position: 475826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:474522-474586:-1:exon

position:474522:-1
position: 474522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474586:-1
position: 474586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:469801-470688:-1:exon

position:470688:-1
position: 470688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GRHL3
product: grainyhead like transcription factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535157.1
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(469801..470688,474522..474586,475741..475826,475971..476059,476782..476816,477701..477834,478245..478323,478928..479086,480864..480958,481659..481770,482745..482898,484754..484833,485135..485471,487062..487123,487830..488016,498351..498544))
location: region:469801-498544:-1
so has part: feature:498351-498544:-1:exon
so has part: feature:487830-488016:-1:exon
so has part: feature:487062-487123:-1:exon
so has part: feature:485135-485471:-1:exon
so has part: feature:484754-484833:-1:exon
so has part: feature:482745-482898:-1:exon
so has part: feature:481659-481770:-1:exon
so has part: feature:480864-480958:-1:exon
so has part: feature:478928-479086:-1:exon
so has part: feature:478245-478323:-1:exon
so has part: feature:477701-477834:-1:exon
so has part: feature:476782-476816:-1:exon
so has part: feature:475971-476059:-1:exon
so has part: feature:475741-475826:-1:exon
so has part: feature:474522-474586:-1:exon
so has part: feature:469801-470688:-1:exon

position:498544:-1
position: 498544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498351-498544:-1:exon

position:498351:-1
position: 498351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487830-488016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487062-487123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485135-485471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484754-484833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482745-482898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481659-481770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480864-480958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478928-479086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478245-478323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:477701-477834:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:476782-476816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:475971-476059:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:475741-475826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:474522-474586:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:469801-470688:-1:exon

GRHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GRHL3
product: grainyhead like transcription factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040535158.1
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(469801..470688,474522..474586,475741..475826,475971..476059,476782..476816,477701..477834,478245..478323,478928..479086,480864..480958,481659..481770,482745..482898,484754..484833,485135..485471,487062..487123,487830..488016,490393..490442))
location: region:469801-490442:-1
so has part: feature:490393-490442:-1:exon
so has part: feature:487830-488016:-1:exon
so has part: feature:487062-487123:-1:exon
so has part: feature:485135-485471:-1:exon
so has part: feature:484754-484833:-1:exon
so has part: feature:482745-482898:-1:exon
so has part: feature:481659-481770:-1:exon
so has part: feature:480864-480958:-1:exon
so has part: feature:478928-479086:-1:exon
so has part: feature:478245-478323:-1:exon
so has part: feature:477701-477834:-1:exon
so has part: feature:476782-476816:-1:exon
so has part: feature:475971-476059:-1:exon
so has part: feature:475741-475826:-1:exon
so has part: feature:474522-474586:-1:exon
so has part: feature:469801-470688:-1:exon

position:490442:-1
position: 490442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490393-490442:-1:exon

position:490393:-1
position: 490393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487830-488016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487062-487123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485135-485471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484754-484833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482745-482898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481659-481770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480864-480958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478928-479086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478245-478323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:477701-477834:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:476782-476816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:475971-476059:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:475741-475826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:474522-474586:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:469801-470688:-1:exon

GRHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GRHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: grainyhead-like protein 3 homolog isoform X1
translation: MSNELDFRSVRLMKNDTMNFQKFSYTNEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSLLYDYYMVPKEKRILPSGMMGRNELGKRHCHGMEYDPEIASFDGSAHLMKLLSENTSMTQEYCEPQKKNGLNLEGIPTPHKPAMLPPGISKLDATPDTYMVPPGDVYDNSSLNSLFETIPVAPTQQRWQPDSTFKEDPQESLLFSDILKPQPEPPCSESYATDSVKSDFEYTLGSPKAIHIKSGDSPMAYLNKGQFYPITLRTAGDSKCLHLSSNKVKSVVMIVFDNEKIPTEQLKFWKHWHSRQPTAKQRVIDVADCKENFNTVQNIEELAYNALSFVWNVHEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDYGNGTSQLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKGKCLDSNNNGLKGCLLSGFRGNEITFLRPETDLETQPVLFIPNVHFSNQQRCGTVLPPAVPNSANRLPLKRSGTSFTDEFDPIPPKQTKEEDPQRVLLYVRRESEEVFDALMLKTPDLQGLRTAISEKYGLPEESIYKVYKKCKRGILVNMDNNIIQHYSNHMAFLLDMVEAEDKIQVILKEL
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(470574..470688,474522..474586,475741..475826,475971..476059,476782..476816,477701..477834,478245..478323,478928..479086,480864..480958,481659..481770,482745..482898,484754..484833,485135..485471,487062..487123,487830..488016,498351..498367))
location: region:470574-498367:-1
so has part: feature:498351-498367:-1:exon
so has part: feature:487830-488016:-1:exon
so has part: feature:487062-487123:-1:exon
so has part: feature:485135-485471:-1:exon
so has part: feature:484754-484833:-1:exon
so has part: feature:482745-482898:-1:exon
so has part: feature:481659-481770:-1:exon
so has part: feature:480864-480958:-1:exon
so has part: feature:478928-479086:-1:exon
so has part: feature:478245-478323:-1:exon
so has part: feature:477701-477834:-1:exon
so has part: feature:476782-476816:-1:exon
so has part: feature:475971-476059:-1:exon
so has part: feature:475741-475826:-1:exon
so has part: feature:474522-474586:-1:exon
so has part: feature:470574-470688:-1:exon

XP_040391091.1
type: Protein
SIO_000068: ncbiprotein

position:470574:-1
position: 470574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498367:-1
position: 498367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498351-498367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487830-488016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487062-487123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485135-485471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484754-484833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482745-482898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481659-481770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480864-480958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478928-479086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478245-478323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:477701-477834:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:476782-476816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:475971-476059:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:475741-475826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:474522-474586:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:470574-470688:-1:exon

GRHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GRHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: grainyhead-like protein 3 homolog isoform X2
translation: MKNDTMNFQKFSYTNEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSLLYDYYMVPKEKRILPSGMMGRNELGKRHCHGMEYDPEIASFDGSAHLMKLLSENTSMTQEYCEPQKKNGLNLEGIPTPHKPAMLPPGISKLDATPDTYMVPPGDVYDNSSLNSLFETIPVAPTQQRWQPDSTFKEDPQESLLFSDILKPQPEPPCSESYATDSVKSDFEYTLGSPKAIHIKSGDSPMAYLNKGQFYPITLRTAGDSKCLHLSSNKVKSVVMIVFDNEKIPTEQLKFWKHWHSRQPTAKQRVIDVADCKENFNTVQNIEELAYNALSFVWNVHEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDYGNGTSQLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKGKCLDSNNNGLKGCLLSGFRGNEITFLRPETDLETQPVLFIPNVHFSNQQRCGTVLPPAVPNSANRLPLKRSGTSFTDEFDPIPPKQTKEEDPQRVLLYVRRESEEVFDALMLKTPDLQGLRTAISEKYGLPEESIYKVYKKCKRGILVNMDNNIIQHYSNHMAFLLDMVEAEDKIQVILKEL
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(470574..470688,474522..474586,475741..475826,475971..476059,476782..476816,477701..477834,478245..478323,478928..479086,480864..480958,481659..481770,482745..482898,484754..484833,485135..485471,487062..487123,487830..487997))
location: region:470574-487997:-1
so has part: feature:487830-487997:-1:exon
so has part: feature:487062-487123:-1:exon
so has part: feature:485135-485471:-1:exon
so has part: feature:484754-484833:-1:exon
so has part: feature:482745-482898:-1:exon
so has part: feature:481659-481770:-1:exon
so has part: feature:480864-480958:-1:exon
so has part: feature:478928-479086:-1:exon
so has part: feature:478245-478323:-1:exon
so has part: feature:477701-477834:-1:exon
so has part: feature:476782-476816:-1:exon
so has part: feature:475971-476059:-1:exon
so has part: feature:475741-475826:-1:exon
so has part: feature:474522-474586:-1:exon
so has part: feature:470574-470688:-1:exon

XP_040391092.1
type: Protein
SIO_000068: ncbiprotein

position:487997:-1
position: 487997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487830-487997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487062-487123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485135-485471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484754-484833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482745-482898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481659-481770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480864-480958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478928-479086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478245-478323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:477701-477834:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:476782-476816:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:475971-476059:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:475741-475826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:474522-474586:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:470574-470688:-1:exon

GRHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GRHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: grainyhead-like protein 3 homolog isoform X2
translation: MKNDTMNFQKFSYTNEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSLLYDYYMVPKEKRILPSGMMGRNELGKRHCHGMEYDPEIASFDGSAHLMKLLSENTSMTQEYCEPQKKNGLNLEGIPTPHKPAMLPPGISKLDATPDTYMVPPGDVYDNSSLNSLFETIPVAPTQQRWQPDSTFKEDPQESLLFSDILKPQPEPPCSESYATDSVKSDFEYTLGSPKAIHIKSGDSPMAYLNKGQFYPITLRTAGDSKCLHLSSNKVKSVVMIVFDNEKIPTEQLKFWKHWHSRQPTAKQRVIDVADCKENFNTVQNIEELAYNALSFVWNVHEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDYGNGTSQLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKGKCLDSNNNGLKGCLLSGFRGNEITFLRPETDLETQPVLFIPNVHFSNQQRCGTVLPPAVPNSANRLPLKRSGTSFTDEFDPIPPKQTKEEDPQRVLLYVRRESEEVFDALMLKTPDLQGLRTAISEKYGLPEESIYKVYKKCKRGILVNMDNNIIQHYSNHMAFLLDMVEAEDKIQVILKEL
SIO_010081: GRHL3
subclass of: SO_0000673
so part of: GRHL3
location: complement(join(470574..470688,474522..474586,475741..475826,475971..476059,476782..476816,477701..477834,478245..478323,478928..479086,480864..480958,481659..481770,482745..482898,484754..484833,485135..485471,487062..487123,487830..487997))
location: region:470574-487997:-1
so has part: feature:487830-487997:-1:exon
so has part: feature:487062-487123:-1:exon
so has part: feature:485135-485471:-1:exon
so has part: feature:484754-484833:-1:exon
so has part: feature:482745-482898:-1:exon
so has part: feature:481659-481770:-1:exon
so has part: feature:480864-480958:-1:exon
so has part: feature:478928-479086:-1:exon
so has part: feature:478245-478323:-1:exon
so has part: feature:477701-477834:-1:exon
so has part: feature:476782-476816:-1:exon
so has part: feature:475971-476059:-1:exon
so has part: feature:475741-475826:-1:exon
so has part: feature:474522-474586:-1:exon
so has part: feature:470574-470688:-1:exon

XP_040391093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487830-487997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487062-487123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485135-485471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484754-484833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482745-482898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481659-481770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480864-480958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478928-479086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478245-478323:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:477701-477834:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:476782-476816:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:475971-476059:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:475741-475826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:474522-474586:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:470574-470688:-1:exon

IFNLR1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: IFNLR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 531600..537542
location: region:531600-537542:1
so has part: feature:531600-537542:1:exon
subclass of: SO_0000010

121058988
type: Gene
SIO_000068: ncbigene

position:531600:1
position: 531600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537542:1
position: 537542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531600-537542:1:exon

IFNLR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IFNLR1
product: interferon lambda receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040535228.1
SIO_010081: IFNLR1
subclass of: SO_0000673
so part of: IFNLR1
location: join(531600..532082,532762..532885,533139..533320,533748..533890,534427..534583,535344..535471,535693..537542)
location: region:531600-537542:1
so has part: feature:531600-532082:1:exon
so has part: feature:532762-532885:1:exon
so has part: feature:533139-533320:1:exon
so has part: feature:533748-533890:1:exon
so has part: feature:534427-534583:1:exon
so has part: feature:535344-535471:1:exon
so has part: feature:535693-537542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531600-532082:1:exon

position:532082:1
position: 532082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532762-532885:1:exon

position:532762:1
position: 532762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532885:1
position: 532885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:533139-533320:1:exon

position:533139:1
position: 533139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533320:1
position: 533320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533748-533890:1:exon

position:533748:1
position: 533748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533890:1
position: 533890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:534427-534583:1:exon

position:534427:1
position: 534427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534583:1
position: 534583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:535344-535471:1:exon

position:535344:1
position: 535344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535471:1
position: 535471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:535693-537542:1:exon

position:535693:1
position: 535693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFNLR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IFNLR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon lambda receptor 1
translation: MSAWRIRVLVALCFLRQPRGHIQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVTYTVRYESQERMDKWIKVRHCKNIHSTSCNLTCVLPNFFIKFRARVKAVSGKLQSPWVESQFKEYYLDVELAPPVLNVNVQENILHVNATFPLATCVESFSWMYDLNLWEAGSEDKKQYESIFRKNTVTIDTTALRGNYCLSARSSFQSIGFKYSKFSQPVCMLLNHKAVEWKLPYSAMIPVFVLPVLLASAFITWLLKQDAKHKKLPHALDLSNFKGAGAPFHCELSEEFLADSLACTEKPVSQGKKNRTSPRNNLPWMASLLSSSSSEEEEEDEEDSRTFIPYTEMRRFPKRCLNYQPSRTAGPETGRDSTSGGLSVDSGSVMDFKALGFSFSPVRQNEVDTSGSQGNEKASLPHSSSLGRISLTDVRFPGPREHGQHDTDRDDCLEMTPLQTPLNRICAKLPADECRNHHHVTTCHQKPLADLPIQVREKSQLSVDPSMEQLICFQTLQVAEDEGIASDCDSDHFIEGTPPASTVLSDAFGTSNMEGKYDQKFKFKGYQHTHYMGRS
SIO_010081: IFNLR1
subclass of: SO_0000673
so part of: IFNLR1
location: join(532025..532082,532762..532885,533139..533320,533748..533890,534427..534583,535344..535471,535693..536592)
location: region:532025-536592:1
so has part: feature:532025-532082:1:exon
so has part: feature:532762-532885:1:exon
so has part: feature:533139-533320:1:exon
so has part: feature:533748-533890:1:exon
so has part: feature:534427-534583:1:exon
so has part: feature:535344-535471:1:exon
so has part: feature:535693-536592:1:exon

XP_040391162.1
type: Protein
SIO_000068: ncbiprotein

position:532025:1
position: 532025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536592:1
position: 536592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532025-532082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532762-532885:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533139-533320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:533748-533890:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534427-534583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535344-535471:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:535693-536592:1:exon

IL22RA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: IL22RA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 540887..549365
location: region:540887-549365:1
so has part: feature:540887-549365:1:exon
subclass of: SO_0000010

121058950
type: Gene
SIO_000068: ncbigene

position:540887:1
position: 540887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549365:1
position: 549365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540887-549365:1:exon

IL22RA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: IL22RA1
product: interleukin 22 receptor subunit alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040535143.1
SIO_010081: IL22RA1
subclass of: SO_0000673
so part of: IL22RA1
location: join(540887..541106,543607..543739,544427..544608,545843..546027,546496..546631,546864..546985,547900..549365)
location: region:540887-549365:1
so has part: feature:540887-541106:1:exon
so has part: feature:543607-543739:1:exon
so has part: feature:544427-544608:1:exon
so has part: feature:545843-546027:1:exon
so has part: feature:546496-546631:1:exon
so has part: feature:546864-546985:1:exon
so has part: feature:547900-549365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540887-541106:1:exon

position:541106:1
position: 541106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543607-543739:1:exon

position:543607:1
position: 543607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543739:1
position: 543739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544427-544608:1:exon

position:544427:1
position: 544427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544608:1
position: 544608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545843-546027:1:exon

position:545843:1
position: 545843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546027:1
position: 546027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:546496-546631:1:exon

position:546496:1
position: 546496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546631:1
position: 546631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:546864-546985:1:exon

position:546864:1
position: 546864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546985:1
position: 546985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:547900-549365:1:exon

position:547900:1
position: 547900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL22RA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: IL22RA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-22 receptor subunit alpha-1
translation: MKKFLIVLAVCSVVGIATTERSSCLKRAAFSSTNFENILTWETEADIPPGTVFDVQYKQYGEKAWLNKRECQNITQPFCNLTHETENFTEHYYARVRATGQNYCSSNWVRSERFEPRKETVIGAPELEYIPYVRSIKFLIRPPYTPLRGEDGHQLTIEDIYSKFGSVDYHLTLFNQRTHQKWIKNEHNKEFEVINLDPDTEYNGTVYIHLRERSSKSQVFWVKTLADTTWLLYCFVALGFCAGLVFAAISYVIYKYVKQHSAQPMSLDFRGISSFQPLTLTVEHIIKPINLSKPSLLIPEVQLVQISQHLDKALEPPRPLCPPEATYQHQADVQASQLPAQPPCPASTNPAYAPQRAEQRVSNLPLTYGVCVDGTDHVDKNNLHPNQVLKEVSPDSFAGVKLVNQVLGKSCSHWSYKEQRPNVALWGSSGVGEPALVQRSPGQMQQLLLQTDGMESKVHVPQLALSLVGQEGCYRQQTAELPLLLSSVTVDGDQVPEDESLPSPSAALLLSVSTGNSFPGENNTEWWMSSGSVSHPENKFYFLETQETQKLTAVKELSCTKLNNVLSQDTISDRGNGFSLTTLFKDLNLKVLWDQEDENTEFY
SIO_010081: IL22RA1
subclass of: SO_0000673
so part of: IL22RA1
location: join(541064..541106,543607..543739,544427..544608,545843..546027,546496..546631,546864..546985,547900..548910)
location: region:541064-548910:1
so has part: feature:541064-541106:1:exon
so has part: feature:543607-543739:1:exon
so has part: feature:544427-544608:1:exon
so has part: feature:545843-546027:1:exon
so has part: feature:546496-546631:1:exon
so has part: feature:546864-546985:1:exon
so has part: feature:547900-548910:1:exon

XP_040391077.1
type: Protein
SIO_000068: ncbiprotein

position:541064:1
position: 541064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548910:1
position: 548910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541064-541106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543607-543739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544427-544608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545843-546027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546496-546631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546864-546985:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547900-548910:1:exon

MYOM3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MYOM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 553860..580696
location: region:553860-580696:1
so has part: feature:553860-580696:1:exon
subclass of: SO_0000010

121058949
type: Gene
SIO_000068: ncbigene

position:553860:1
position: 553860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580696:1
position: 580696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553860-580696:1:exon

MYOM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MYOM3
product: myomesin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535142.1
SIO_010081: MYOM3
subclass of: SO_0000673
so part of: MYOM3
location: join(553860..554213,556304..556438,556592..556666,557327..557486,557731..557888,558946..559041,559694..559782,560982..561026,561231..561371,562412..562573,562858..562999,563091..563290,564001..564128,565027..565210,566108..566282,566920..567041,567717..567904,568073..568199,568697..568875,568952..569066,569288..569444,569813..569922,570419..570463,570595..570731,572356..572500,573751..573810,574809..574876,575164..575274,575919..576006,576335..576373,576895..577000,577812..577975,578598..578634,578756..578778,578869..578924,579991..580696)
location: region:553860-580696:1
so has part: feature:553860-554213:1:exon
so has part: feature:556304-556438:1:exon
so has part: feature:556592-556666:1:exon
so has part: feature:557327-557486:1:exon
so has part: feature:557731-557888:1:exon
so has part: feature:558946-559041:1:exon
so has part: feature:559694-559782:1:exon
so has part: feature:560982-561026:1:exon
so has part: feature:561231-561371:1:exon
so has part: feature:562412-562573:1:exon
so has part: feature:562858-562999:1:exon
so has part: feature:563091-563290:1:exon
so has part: feature:564001-564128:1:exon
so has part: feature:565027-565210:1:exon
so has part: feature:566108-566282:1:exon
so has part: feature:566920-567041:1:exon
so has part: feature:567717-567904:1:exon
so has part: feature:568073-568199:1:exon
so has part: feature:568697-568875:1:exon
so has part: feature:568952-569066:1:exon
so has part: feature:569288-569444:1:exon
so has part: feature:569813-569922:1:exon
so has part: feature:570419-570463:1:exon
so has part: feature:570595-570731:1:exon
so has part: feature:572356-572500:1:exon
so has part: feature:573751-573810:1:exon
so has part: feature:574809-574876:1:exon
so has part: feature:575164-575274:1:exon
so has part: feature:575919-576006:1:exon
so has part: feature:576335-576373:1:exon
so has part: feature:576895-577000:1:exon
so has part: feature:577812-577975:1:exon
so has part: feature:578598-578634:1:exon
so has part: feature:578756-578778:1:exon
so has part: feature:578869-578924:1:exon
so has part: feature:579991-580696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553860-554213:1:exon

position:554213:1
position: 554213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556304-556438:1:exon

position:556304:1
position: 556304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556438:1
position: 556438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:556592-556666:1:exon

position:556592:1
position: 556592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556666:1
position: 556666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:557327-557486:1:exon

position:557327:1
position: 557327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557486:1
position: 557486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:557731-557888:1:exon

position:557731:1
position: 557731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557888:1
position: 557888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:558946-559041:1:exon

position:558946:1
position: 558946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559041:1
position: 559041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:559694-559782:1:exon

position:559694:1
position: 559694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559782:1
position: 559782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:560982-561026:1:exon

position:560982:1
position: 560982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561026:1
position: 561026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:561231-561371:1:exon

position:561231:1
position: 561231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561371:1
position: 561371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:562412-562573:1:exon

position:562412:1
position: 562412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562573:1
position: 562573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:562858-562999:1:exon

position:562858:1
position: 562858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562999:1
position: 562999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:563091-563290:1:exon

position:563091:1
position: 563091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563290:1
position: 563290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:564001-564128:1:exon

position:564001:1
position: 564001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564128:1
position: 564128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:565027-565210:1:exon

position:565027:1
position: 565027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565210:1
position: 565210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:566108-566282:1:exon

position:566108:1
position: 566108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566282:1
position: 566282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:566920-567041:1:exon

position:566920:1
position: 566920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567041:1
position: 567041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:567717-567904:1:exon

position:567717:1
position: 567717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567904:1
position: 567904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:568073-568199:1:exon

position:568073:1
position: 568073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568199:1
position: 568199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:568697-568875:1:exon

position:568697:1
position: 568697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568875:1
position: 568875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:568952-569066:1:exon

position:568952:1
position: 568952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569066:1
position: 569066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:569288-569444:1:exon

position:569288:1
position: 569288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569444:1
position: 569444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:569813-569922:1:exon

position:569813:1
position: 569813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569922:1
position: 569922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:570419-570463:1:exon

position:570419:1
position: 570419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570463:1
position: 570463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:570595-570731:1:exon

position:570595:1
position: 570595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570731:1
position: 570731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:572356-572500:1:exon

position:572356:1
position: 572356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572500:1
position: 572500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:573751-573810:1:exon

position:573751:1
position: 573751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573810:1
position: 573810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:574809-574876:1:exon

position:574809:1
position: 574809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574876:1
position: 574876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:575164-575274:1:exon

position:575164:1
position: 575164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575274:1
position: 575274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:575919-576006:1:exon

position:575919:1
position: 575919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576006:1
position: 576006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:576335-576373:1:exon

position:576335:1
position: 576335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576373:1
position: 576373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:576895-577000:1:exon

position:576895:1
position: 576895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577000:1
position: 577000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:577812-577975:1:exon

position:577812:1
position: 577812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577975:1
position: 577975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:578598-578634:1:exon

position:578598:1
position: 578598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578634:1
position: 578634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:578756-578778:1:exon

position:578756:1
position: 578756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578778:1
position: 578778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:578869-578924:1:exon

position:578869:1
position: 578869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578924:1
position: 578924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:579991-580696:1:exon

position:579991:1
position: 579991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYOM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MYOM3
product: myomesin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535141.1
SIO_010081: MYOM3
subclass of: SO_0000673
so part of: MYOM3
location: join(553861..554213,556304..556438,556592..556666,557327..557486,557731..557888,558946..559041,559694..559782,560982..561026,561231..561371,562412..562573,562858..562999,563091..563290,563622..563675,564001..564128,565027..565210,566108..566282,566920..567041,567717..567904,568073..568199,568697..568875,568952..569066,569288..569444,569813..569922,570419..570463,570595..570731,572356..572500,573751..573810,574809..574876,575164..575274,575919..576006,576335..576373,576895..577000,577812..577975,578598..578634,578756..578778,578869..578924,579991..580696)
location: region:553861-580696:1
so has part: feature:553861-554213:1:exon
so has part: feature:556304-556438:1:exon
so has part: feature:556592-556666:1:exon
so has part: feature:557327-557486:1:exon
so has part: feature:557731-557888:1:exon
so has part: feature:558946-559041:1:exon
so has part: feature:559694-559782:1:exon
so has part: feature:560982-561026:1:exon
so has part: feature:561231-561371:1:exon
so has part: feature:562412-562573:1:exon
so has part: feature:562858-562999:1:exon
so has part: feature:563091-563290:1:exon
so has part: feature:563622-563675:1:exon
so has part: feature:564001-564128:1:exon
so has part: feature:565027-565210:1:exon
so has part: feature:566108-566282:1:exon
so has part: feature:566920-567041:1:exon
so has part: feature:567717-567904:1:exon
so has part: feature:568073-568199:1:exon
so has part: feature:568697-568875:1:exon
so has part: feature:568952-569066:1:exon
so has part: feature:569288-569444:1:exon
so has part: feature:569813-569922:1:exon
so has part: feature:570419-570463:1:exon
so has part: feature:570595-570731:1:exon
so has part: feature:572356-572500:1:exon
so has part: feature:573751-573810:1:exon
so has part: feature:574809-574876:1:exon
so has part: feature:575164-575274:1:exon
so has part: feature:575919-576006:1:exon
so has part: feature:576335-576373:1:exon
so has part: feature:576895-577000:1:exon
so has part: feature:577812-577975:1:exon
so has part: feature:578598-578634:1:exon
so has part: feature:578756-578778:1:exon
so has part: feature:578869-578924:1:exon
so has part: feature:579991-580696:1:exon

position:553861:1
position: 553861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553861-554213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556304-556438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556592-556666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:557327-557486:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:557731-557888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558946-559041:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559694-559782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:560982-561026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561231-561371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:562412-562573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562858-562999:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:563091-563290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:563622-563675:1:exon

position:563622:1
position: 563622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563675:1
position: 563675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:564001-564128:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:565027-565210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566108-566282:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:566920-567041:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:567717-567904:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:568073-568199:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568697-568875:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:568952-569066:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:569288-569444:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:569813-569922:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:570419-570463:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:570595-570731:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:572356-572500:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:573751-573810:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:574809-574876:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:575164-575274:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:575919-576006:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:576335-576373:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:576895-577000:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:577812-577975:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:578598-578634:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:578756-578778:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:578869-578924:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:579991-580696:1:exon

MYOM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MYOM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-3 isoform X1
translation: MLYLRLEDGHSNMGNILLGRVILSVVNREKETFLCPFSCMRTGTLAVVFTGKKVHFWLPSMGTRTFFHHREEEQKAEREQSLKMTSTTRKKRFKTSEEEETFSLSELSIAAALALTSEIPQDYKLRREAAILELEQRGQKRVRFGNEMEKLEKEVIRNCRLLRVRADRKALRRKAVDKAQMEKDYIELRSGRPPMFWIPLRVHAVWERMEVTLACTILASPPPQVTWYKNGIPINLRLAPAGKYKIKNKFGMLTLHISRCSMEDSAEYSVEIKNQYGEAYSFATVLVRKYYGKESGFDSEIYRRSLIAREADFAFSMKPLFSREKEPFTLSCYFSSDLLEHQRDIAWFRDGELLQNSECQKLKYQDREASLTVSCAHKEDEGFYTIRVPSLDGYKEQTTYVFVRDATAETAGAPGSPLNVKCHDINKDCLILSWVAPSDNGGSPILGYFIERCVAGSEDWVPCNDKPVKTCRYPVLGLAEGQTYQFQVKAVNKAGISHPSKTSAPVTTYDPSKDKRVTVIPYDEGRKIEIFKDDLEGHIKIPLPPTNVHASEVREDYVALAWDEPDPRGREPLNYYVEKSIVGSNSWQMVNLDMPVNSPRFALFDLVKGKSYRFRVRSVNKYGISEPSLPSEPITAGAKLATLPPPSQVLAFRDTKTSVVLQWDKLKDGLEPLGYYIYCRETGTEGWQTVNNKPVTCNEFTVPGLQPGKEYVFCVKSVSEAGLSDSSPETDPIVVRPAIARPSAPRGFVLLSCGKSDMTVGWKPPKRRGGTKLLGYFLDQHDTSELDWHEVNIQPIPQRVYTVGNLKEGHLYEFRACAVNMAGVGEVSEPSDAFKCEEWTMPEPGPPYDVKFTEVRDSSLMLHWQAPLYTGAGPVTGYYVDVCEEGSEEWKQINKQSVATTHMKVSDLETGKCFIFRVRALNKAGIGPPSLPSDPVVAKTKPGTNEIELGVDEEGLIYMAFEAPEKNDSSEFIWSKDYEGPPDADRVRTEEKGNKSKLILTDPSEKDLGVYSVEVTDVDEDISASCTLTKEDLDKLLKRSHEIRNPLIKLISGWNIDVLEKGEVRLWLEVEKLSPNAELHLIFNEKELKSTPTHKINFVKGKGLVELIIQNFCDDDKGMYTAQLQDGKAKNQFTLVLLDERFAKVAEEADAKRREWKKKQGPYFIENLRWKVTESCEVLLTCKATNLRKDTSFQWFFNKKTRTGGVFDPQTGIGTLRVKKITKADEGQYKALVSDDRGEDYTQLDLTKGSFEDLLKELCRISALSASPLKIQPTEEGIKIYTDVKYYTDYMKTTWYHKEKQVESRDRLKAGSTMNQIWLHILNPTDADKGKYVLELFDGNDTHKLSTDLSGQAFEDALAEHRRLKEAAVAEKCRARVVQGLPDVATIMEDKTLCLTCCVSGDPYPEITWFKNEKVIVFKDRYKMDVKGTVVTITIEKVCNEDTGKYSIYVKNKYGSETGQVTISVYKHGEIPVGTEEKSQVETVMRKPK
SIO_010081: MYOM3
subclass of: SO_0000673
so part of: MYOM3
location: join(554062..554213,556304..556438,556592..556666,557327..557486,557731..557888,558946..559041,559694..559782,560982..561026,561231..561371,562412..562573,562858..562999,563091..563290,563622..563675,564001..564128,565027..565210,566108..566282,566920..567041,567717..567904,568073..568199,568697..568875,568952..569066,569288..569444,569813..569922,570419..570463,570595..570731,572356..572500,573751..573810,574809..574876,575164..575274,575919..576006,576335..576373,576895..577000,577812..577975,578598..578634,578756..578778,578869..578924,579991..580287)
location: region:554062-580287:1
so has part: feature:554062-554213:1:exon
so has part: feature:556304-556438:1:exon
so has part: feature:556592-556666:1:exon
so has part: feature:557327-557486:1:exon
so has part: feature:557731-557888:1:exon
so has part: feature:558946-559041:1:exon
so has part: feature:559694-559782:1:exon
so has part: feature:560982-561026:1:exon
so has part: feature:561231-561371:1:exon
so has part: feature:562412-562573:1:exon
so has part: feature:562858-562999:1:exon
so has part: feature:563091-563290:1:exon
so has part: feature:563622-563675:1:exon
so has part: feature:564001-564128:1:exon
so has part: feature:565027-565210:1:exon
so has part: feature:566108-566282:1:exon
so has part: feature:566920-567041:1:exon
so has part: feature:567717-567904:1:exon
so has part: feature:568073-568199:1:exon
so has part: feature:568697-568875:1:exon
so has part: feature:568952-569066:1:exon
so has part: feature:569288-569444:1:exon
so has part: feature:569813-569922:1:exon
so has part: feature:570419-570463:1:exon
so has part: feature:570595-570731:1:exon
so has part: feature:572356-572500:1:exon
so has part: feature:573751-573810:1:exon
so has part: feature:574809-574876:1:exon
so has part: feature:575164-575274:1:exon
so has part: feature:575919-576006:1:exon
so has part: feature:576335-576373:1:exon
so has part: feature:576895-577000:1:exon
so has part: feature:577812-577975:1:exon
so has part: feature:578598-578634:1:exon
so has part: feature:578756-578778:1:exon
so has part: feature:578869-578924:1:exon
so has part: feature:579991-580287:1:exon

XP_040391075.1
type: Protein
SIO_000068: ncbiprotein

position:554062:1
position: 554062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580287:1
position: 580287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554062-554213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556304-556438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556592-556666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:557327-557486:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:557731-557888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558946-559041:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559694-559782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:560982-561026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561231-561371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:562412-562573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562858-562999:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:563091-563290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:563622-563675:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:564001-564128:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:565027-565210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566108-566282:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:566920-567041:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:567717-567904:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:568073-568199:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568697-568875:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:568952-569066:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:569288-569444:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:569813-569922:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:570419-570463:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:570595-570731:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:572356-572500:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:573751-573810:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:574809-574876:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:575164-575274:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:575919-576006:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:576335-576373:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:576895-577000:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:577812-577975:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:578598-578634:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:578756-578778:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:578869-578924:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:579991-580287:1:exon

MYOM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MYOM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-3 isoform X2
translation: MLYLRLEDGHSNMGNILLGRVILSVVNREKETFLCPFSCMRTGTLAVVFTGKKVHFWLPSMGTRTFFHHREEEQKAEREQSLKMTSTTRKKRFKTSEEEETFSLSELSIAAALALTSEIPQDYKLRREAAILELEQRGQKRVRFGNEMEKLEKEVIRNCRLLRVRADRKALRRKAVDKAQMEKDYIELRSGRPPMFWIPLRVHAVWERMEVTLACTILASPPPQVTWYKNGIPINLRLAPAGKYKIKNKFGMLTLHISRCSMEDSAEYSVEIKNQYGEAYSFATVLVRKYYGKESGFDSEIYRRSLIAREADFAFSMKPLFSREKEPFTLSCYFSSDLLEHQRDIAWFRDGELLQNSECQKLKYQDREASLTVSCAHKEDEGFYTIRVPSLDGYKEQTTYVFVRDATAETAGAPGSPLNVKCHDINKDCLILSWVAPSDNGGSPILGYFIERCVAGSEDWVPCNDKPVKTCRYPVLGLAEGQTYQFQVKAVNKAGISHPSKTSAPVTTYDPSKDKRVTGHIKIPLPPTNVHASEVREDYVALAWDEPDPRGREPLNYYVEKSIVGSNSWQMVNLDMPVNSPRFALFDLVKGKSYRFRVRSVNKYGISEPSLPSEPITAGAKLATLPPPSQVLAFRDTKTSVVLQWDKLKDGLEPLGYYIYCRETGTEGWQTVNNKPVTCNEFTVPGLQPGKEYVFCVKSVSEAGLSDSSPETDPIVVRPAIARPSAPRGFVLLSCGKSDMTVGWKPPKRRGGTKLLGYFLDQHDTSELDWHEVNIQPIPQRVYTVGNLKEGHLYEFRACAVNMAGVGEVSEPSDAFKCEEWTMPEPGPPYDVKFTEVRDSSLMLHWQAPLYTGAGPVTGYYVDVCEEGSEEWKQINKQSVATTHMKVSDLETGKCFIFRVRALNKAGIGPPSLPSDPVVAKTKPGTNEIELGVDEEGLIYMAFEAPEKNDSSEFIWSKDYEGPPDADRVRTEEKGNKSKLILTDPSEKDLGVYSVEVTDVDEDISASCTLTKEDLDKLLKRSHEIRNPLIKLISGWNIDVLEKGEVRLWLEVEKLSPNAELHLIFNEKELKSTPTHKINFVKGKGLVELIIQNFCDDDKGMYTAQLQDGKAKNQFTLVLLDERFAKVAEEADAKRREWKKKQGPYFIENLRWKVTESCEVLLTCKATNLRKDTSFQWFFNKKTRTGGVFDPQTGIGTLRVKKITKADEGQYKALVSDDRGEDYTQLDLTKGSFEDLLKELCRISALSASPLKIQPTEEGIKIYTDVKYYTDYMKTTWYHKEKQVESRDRLKAGSTMNQIWLHILNPTDADKGKYVLELFDGNDTHKLSTDLSGQAFEDALAEHRRLKEAAVAEKCRARVVQGLPDVATIMEDKTLCLTCCVSGDPYPEITWFKNEKVIVFKDRYKMDVKGTVVTITIEKVCNEDTGKYSIYVKNKYGSETGQVTISVYKHGEIPVGTEEKSQVETVMRKPK
SIO_010081: MYOM3
subclass of: SO_0000673
so part of: MYOM3
location: join(554062..554213,556304..556438,556592..556666,557327..557486,557731..557888,558946..559041,559694..559782,560982..561026,561231..561371,562412..562573,562858..562999,563091..563290,564001..564128,565027..565210,566108..566282,566920..567041,567717..567904,568073..568199,568697..568875,568952..569066,569288..569444,569813..569922,570419..570463,570595..570731,572356..572500,573751..573810,574809..574876,575164..575274,575919..576006,576335..576373,576895..577000,577812..577975,578598..578634,578756..578778,578869..578924,579991..580287)
location: region:554062-580287:1
so has part: feature:554062-554213:1:exon
so has part: feature:556304-556438:1:exon
so has part: feature:556592-556666:1:exon
so has part: feature:557327-557486:1:exon
so has part: feature:557731-557888:1:exon
so has part: feature:558946-559041:1:exon
so has part: feature:559694-559782:1:exon
so has part: feature:560982-561026:1:exon
so has part: feature:561231-561371:1:exon
so has part: feature:562412-562573:1:exon
so has part: feature:562858-562999:1:exon
so has part: feature:563091-563290:1:exon
so has part: feature:564001-564128:1:exon
so has part: feature:565027-565210:1:exon
so has part: feature:566108-566282:1:exon
so has part: feature:566920-567041:1:exon
so has part: feature:567717-567904:1:exon
so has part: feature:568073-568199:1:exon
so has part: feature:568697-568875:1:exon
so has part: feature:568952-569066:1:exon
so has part: feature:569288-569444:1:exon
so has part: feature:569813-569922:1:exon
so has part: feature:570419-570463:1:exon
so has part: feature:570595-570731:1:exon
so has part: feature:572356-572500:1:exon
so has part: feature:573751-573810:1:exon
so has part: feature:574809-574876:1:exon
so has part: feature:575164-575274:1:exon
so has part: feature:575919-576006:1:exon
so has part: feature:576335-576373:1:exon
so has part: feature:576895-577000:1:exon
so has part: feature:577812-577975:1:exon
so has part: feature:578598-578634:1:exon
so has part: feature:578756-578778:1:exon
so has part: feature:578869-578924:1:exon
so has part: feature:579991-580287:1:exon

XP_040391076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:554062-554213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556304-556438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556592-556666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:557327-557486:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:557731-557888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558946-559041:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559694-559782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:560982-561026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561231-561371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:562412-562573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562858-562999:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:563091-563290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:564001-564128:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:565027-565210:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:566108-566282:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566920-567041:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:567717-567904:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:568073-568199:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:568697-568875:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568952-569066:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:569288-569444:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:569813-569922:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:570419-570463:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:570595-570731:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:572356-572500:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:573751-573810:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:574809-574876:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:575164-575274:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:575919-576006:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:576335-576373:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:576895-577000:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:577812-577975:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:578598-578634:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:578756-578778:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:578869-578924:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:579991-580287:1:exon

LOC121058888
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 583217..586115
location: region:583217-586115:1
so has part: feature:583217-586115:1:exon
subclass of: SO_0000010

121058888
type: Gene
SIO_000068: ncbigene

position:583217:1
position: 583217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586115:1
position: 586115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583217-586115:1:exon

LOC121058888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058888
product: fatty acid-binding protein, liver
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040535015.1
SIO_010081: LOC121058888
subclass of: SO_0000673
so part of: LOC121058888
location: join(583217..583574,584572..584744,585040..585129,586009..586115)
location: region:583217-586115:1
so has part: feature:583217-583574:1:exon
so has part: feature:584572-584744:1:exon
so has part: feature:585040-585129:1:exon
so has part: feature:586009-586115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583217-583574:1:exon

position:583574:1
position: 583574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584572-584744:1:exon

position:584572:1
position: 584572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584744:1
position: 584744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:585040-585129:1:exon

position:585040:1
position: 585040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585129:1
position: 585129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:586009-586115:1:exon

position:586009:1
position: 586009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121058888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein, liver
translation: MAFSGTWQVYAQENYEEFLKALALSEDLIKVARDIKPVVEIQQKGDDFVVTSKTPKQSVTNSFTLGKEADITTMDGKKLKCTVNLVNGKLVCKSDKFSHEQEVKGNEMVETITFGGVTLVRRSKRV
SIO_010081: LOC121058888
subclass of: SO_0000673
so part of: LOC121058888
location: join(583508..583574,584572..584744,585040..585129,586009..586059)
location: region:583508-586059:1
so has part: feature:583508-583574:1:exon
so has part: feature:584572-584744:1:exon
so has part: feature:585040-585129:1:exon
so has part: feature:586009-586059:1:exon

XP_040390949.1
type: Protein
SIO_000068: ncbiprotein

position:583508:1
position: 583508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586059:1
position: 586059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583508-583574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584572-584744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:585040-585129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586009-586059:1:exon

SRSF10
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 587035..597865
location: region:587035-597865:1
so has part: feature:587035-597865:1:exon
subclass of: SO_0000010

121058749
type: Gene
SIO_000068: ncbigene

position:587035:1
position: 587035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597865:1
position: 597865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587035-597865:1:exon

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534673.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587035..587326,589133..589237,590953..591056,592750..592912,593225..593275,593447..597865)
location: region:587035-597865:1
so has part: feature:587035-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593225-593275:1:exon
so has part: feature:593447-597865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587035-587326:1:exon

position:587326:1
position: 587326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

position:589133:1
position: 589133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589237:1
position: 589237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

position:590953:1
position: 590953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591056:1
position: 591056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

position:592750:1
position: 592750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592912:1
position: 592912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:593225-593275:1:exon

position:593225:1
position: 593225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593275:1
position: 593275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:593447-597865:1:exon

position:593447:1
position: 593447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 103 long SRA reads, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534677.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587038..587326,589133..589237,590953..591056,592750..592912,593222..593275,596650..597865)
location: region:587038-597865:1
so has part: feature:587038-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593222-593275:1:exon
so has part: feature:596650-597865:1:exon

position:587038:1
position: 587038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587038-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593222-593275:1:exon

position:593222:1
position: 593222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:596650-597865:1:exon

position:596650:1
position: 596650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 136 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534672.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587051..587326,589133..589237,590953..591056,592750..592912,593222..593275,593447..597865)
location: region:587051-597865:1
so has part: feature:587051-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593222-593275:1:exon
so has part: feature:593447-597865:1:exon

position:587051:1
position: 587051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587051-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593222-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593447-597865:1:exon

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534676.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587060..587326,589133..589237,590953..591056,592750..592912,593225..593275,593447..593548,596650..597865)
location: region:587060-597865:1
so has part: feature:587060-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593225-593275:1:exon
so has part: feature:593447-593548:1:exon
so has part: feature:596650-597865:1:exon

position:587060:1
position: 587060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587060-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593225-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593447-593548:1:exon

position:593548:1
position: 593548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:596650-597865:1:exon

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534678.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587062..587326,589133..589237,590953..591056,592750..592912,593225..593275,596650..597865)
location: region:587062-597865:1
so has part: feature:587062-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593225-593275:1:exon
so has part: feature:596650-597865:1:exon

position:587062:1
position: 587062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587062-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593225-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:596650-597865:1:exon

SRSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SRSF10
product: serine and arginine rich splicing factor 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534675.1
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587063..587326,589133..589237,590953..591056,592750..592912,593222..593275,593447..593548,596650..597865)
location: region:587063-597865:1
so has part: feature:587063-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593222-593275:1:exon
so has part: feature:593447-593548:1:exon
so has part: feature:596650-597865:1:exon

position:587063:1
position: 587063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587063-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593222-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593447-593548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596650-597865:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X3
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRGRTKL
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587262..587326,589133..589237,590953..591056,592750..592912,593222..593275,593447..593548,596650..596668)
location: region:587262-596668:1
so has part: feature:587262-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593222-593275:1:exon
so has part: feature:593447-593548:1:exon
so has part: feature:596650-596668:1:exon

XP_040390609.1
type: Protein
SIO_000068: ncbiprotein

position:587262:1
position: 587262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596668:1
position: 596668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587262-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593222-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593447-593548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596650-596668:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X5
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNSRPTGRPRRSRSHSDNDRGRTKL
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587262..587326,589133..589237,590953..591056,592750..592912,593222..593275,596650..596668)
location: region:587262-596668:1
so has part: feature:587262-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593222-593275:1:exon
so has part: feature:596650-596668:1:exon

XP_040390611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587262-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593222-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:596650-596668:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X4
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRGRTKL
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587262..587326,589133..589237,590953..591056,592750..592912,593225..593275,593447..593548,596650..596668)
location: region:587262-596668:1
so has part: feature:587262-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593225-593275:1:exon
so has part: feature:593447-593548:1:exon
so has part: feature:596650-596668:1:exon

XP_040390610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587262-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593225-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593447-593548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596650-596668:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X6
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNRPTGRPRRSRSHSDNDRGRTKL
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587262..587326,589133..589237,590953..591056,592750..592912,593225..593275,596650..596668)
location: region:587262-596668:1
so has part: feature:587262-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593225-593275:1:exon
so has part: feature:596650-596668:1:exon

XP_040390612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587262-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593225-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:596650-596668:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X1
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRSASHTKSRGTSKTDSKTHYKSSSRYEKESRKKEPARSKSQSRSHSRSRSKSRSRSWTSPKSSGH
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587262..587326,589133..589237,590953..591056,592750..592912,593222..593275,593447..593744)
location: region:587262-593744:1
so has part: feature:587262-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593222-593275:1:exon
so has part: feature:593447-593744:1:exon

XP_040390606.1
type: Protein
SIO_000068: ncbiprotein

position:593744:1
position: 593744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587262-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593222-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593447-593744:1:exon

SRSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SRSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X2
translation: MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNLYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYSYRRSYSPRNRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSRSRSASHTKSRGTSKTDSKTHYKSSSRYEKESRKKEPARSKSQSRSHSRSRSKSRSRSWTSPKSSGH
SIO_010081: SRSF10
subclass of: SO_0000673
so part of: SRSF10
location: join(587262..587326,589133..589237,590953..591056,592750..592912,593225..593275,593447..593744)
location: region:587262-593744:1
so has part: feature:587262-587326:1:exon
so has part: feature:589133-589237:1:exon
so has part: feature:590953-591056:1:exon
so has part: feature:592750-592912:1:exon
so has part: feature:593225-593275:1:exon
so has part: feature:593447-593744:1:exon

XP_040390607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:587262-587326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589133-589237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590953-591056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592750-592912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593225-593275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593447-593744:1:exon

PNRC2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PNRC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(598467..602704)
location: region:598467-602704:-1
so has part: feature:598467-602704:-1:exon
subclass of: SO_0000010

121058750
type: Gene
SIO_000068: ncbigene

position:598467:-1
position: 598467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602704:-1
position: 602704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598467-602704:-1:exon

PNRC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PNRC2
product: proline rich nuclear receptor coactivator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534679.1
SIO_010081: PNRC2
subclass of: SO_0000673
so part of: PNRC2
location: complement(join(598467..600691,601475..601680,602504..602704))
location: region:598467-602704:-1
so has part: feature:602504-602704:-1:exon
so has part: feature:601475-601680:-1:exon
so has part: feature:598467-600691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602504-602704:-1:exon

position:602504:-1
position: 602504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601475-601680:-1:exon

position:601475:-1
position: 601475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601680:-1
position: 601680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:598467-600691:-1:exon

position:600691:-1
position: 600691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNRC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PNRC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich nuclear receptor coactivator 2
translation: MGGGERFNIPAPQSRNITKNHQQLKNRQKSKDQNSQMKMNYMKKERGHGCNSSSGAWQAMQKGGKNNAHFPNNQNWSPNLSNRNLFFTPQTNQNYAGAKFSEPPSPSVLPKPPSHWVPVSFKPSDKEIMTFQLKTLLKVQA
SIO_010081: PNRC2
subclass of: SO_0000673
so part of: PNRC2
location: complement(600248..600673)
location: region:600248-600673:-1
so has part: feature:600248-600673:-1:exon

XP_040390613.1
type: Protein
SIO_000068: ncbiprotein

position:600248:-1
position: 600248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600673:-1
position: 600673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600248-600673:-1:exon

CNR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CNR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 605335..611866
location: region:605335-611866:1
so has part: feature:605335-611866:1:exon
subclass of: SO_0000010

121058752
type: Gene
SIO_000068: ncbigene

position:605335:1
position: 605335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611866:1
position: 611866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605335-611866:1:exon

CNR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CNR2
product: cannabinoid receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040534682.1
SIO_010081: CNR2
subclass of: SO_0000673
so part of: CNR2
location: join(605335..606020,609921..611866)
location: region:605335-611866:1
so has part: feature:605335-606020:1:exon
so has part: feature:609921-611866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605335-606020:1:exon

position:606020:1
position: 606020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609921-611866:1:exon

position:609921:1
position: 609921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CNR2
product: cannabinoid receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040534681.1
SIO_010081: CNR2
subclass of: SO_0000673
so part of: CNR2
location: join(605344..606267,609921..611866)
location: region:605344-611866:1
so has part: feature:605344-606267:1:exon
so has part: feature:609921-611866:1:exon

position:605344:1
position: 605344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605344-606267:1:exon

position:606267:1
position: 606267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609921-611866:1:exon

CNR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CNR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cannabinoid receptor 2
translation: MDICKTYENASKCSANSKLMECFMVLSTQAQKISIATLCGLFGTLCIFENSVVLYLIFSSPGTRRKPSYIFISSLALADLLASIIFVGSFVNFHVLNETDSSKELFLLKLGGVNTSFTASLSSLLLTAVDRYVSISRPSEYKLLVTRKRAWAALGVLWAMCVTTASLPILGWNCCTLNSTCSELFPFVDDNYLSSWVCLVMVLLGCIVYAYTHVLWRAHQHVAYMGKQQAQVGKQNTRMRMDVMLAKTLVMVLTVLVLCWSPVLILMIYSIFAKLTNHLRKVFAFCSVLCLLNSMVNPIIYALRSKELFSSLRAVFFRFKRRLRGTDDSPEADSAHKSSIVETVCEDDVRVT
SIO_010081: CNR2
subclass of: SO_0000673
so part of: CNR2
location: 609985..611043
location: region:609985-611043:1
so has part: feature:609985-611043:1:exon

XP_040390615.1
type: Protein
SIO_000068: ncbiprotein

position:609985:1
position: 609985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611043:1
position: 611043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609985-611043:1:exon

CNR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CNR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cannabinoid receptor 2
translation: MDICKTYENASKCSANSKLMECFMVLSTQAQKISIATLCGLFGTLCIFENSVVLYLIFSSPGTRRKPSYIFISSLALADLLASIIFVGSFVNFHVLNETDSSKELFLLKLGGVNTSFTASLSSLLLTAVDRYVSISRPSEYKLLVTRKRAWAALGVLWAMCVTTASLPILGWNCCTLNSTCSELFPFVDDNYLSSWVCLVMVLLGCIVYAYTHVLWRAHQHVAYMGKQQAQVGKQNTRMRMDVMLAKTLVMVLTVLVLCWSPVLILMIYSIFAKLTNHLRKVFAFCSVLCLLNSMVNPIIYALRSKELFSSLRAVFFRFKRRLRGTDDSPEADSAHKSSIVETVCEDDVRVT
SIO_010081: CNR2
subclass of: SO_0000673
so part of: CNR2
location: 609985..611043
location: region:609985-611043:1
so has part: feature:609985-611043:1:exon

XP_040390616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609985-611043:1:exon

FUCA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: FUCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 612269..617391
location: region:612269-617391:1
so has part: feature:612269-617391:1:exon
subclass of: SO_0000010

121058751
type: Gene
SIO_000068: ncbigene

position:612269:1
position: 612269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617391:1
position: 617391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612269-617391:1:exon

FUCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FUCA1
product: alpha-L-fucosidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040534680.1
SIO_010081: FUCA1
subclass of: SO_0000673
so part of: FUCA1
location: join(612269..612697,613162..613296,613528..613665,614338..614443,614922..615122,615335..615522,616348..616447,617152..617391)
location: region:612269-617391:1
so has part: feature:612269-612697:1:exon
so has part: feature:613162-613296:1:exon
so has part: feature:613528-613665:1:exon
so has part: feature:614338-614443:1:exon
so has part: feature:614922-615122:1:exon
so has part: feature:615335-615522:1:exon
so has part: feature:616348-616447:1:exon
so has part: feature:617152-617391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:612269-612697:1:exon

position:612697:1
position: 612697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:613162-613296:1:exon

position:613162:1
position: 613162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613296:1
position: 613296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:613528-613665:1:exon

position:613528:1
position: 613528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613665:1
position: 613665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614338-614443:1:exon

position:614338:1
position: 614338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614443:1
position: 614443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:614922-615122:1:exon

position:614922:1
position: 614922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615122:1
position: 615122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:615335-615522:1:exon

position:615335:1
position: 615335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615522:1
position: 615522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:616348-616447:1:exon

position:616348:1
position: 616348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616447:1
position: 616447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:617152-617391:1:exon

position:617152:1
position: 617152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FUCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FUCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tissue alpha-L-fucosidase
translation: MAAGPLLWLAAALGPAVAAPRYGPDWGSLDARPLPAWFDRAKVGVFVHWGVFSVPAWGSEWFWWHWQGERRADYERFVRERYPPATAYADFAPRFTAHDFQPREWARLFQRAGARYVVLTTKHHEGFTNWGSPVSWNWNSVDMGPHRDLVGELGQALRESNIRYGLYHSLLEWFNPLYLADKESGFKTQNFVLKKTMPELYDLVLKYKPDLIWSDGDWEAPDSYWNSTSFLAWLYNDSPVKDTVVVNDRWCNNCSCRHGGYYNCADKYKPGTLPAHKWEMCSSIDKLSWGYRSNMHIDELMDEASIIEELVQTVSFGGNYLLNVGPTKEGVIVPIFQERLLALGRWLDTNGEAIYESKPWRVQMEDTGTVWYTSKGPVVYAIFLIWPQDNVLQLSSPTPSPATQVSMLGFAGTLEWQKAPGKGLLVTLPPMPLSPLPAQPGWALRLEGVN
SIO_010081: FUCA1
subclass of: SO_0000673
so part of: FUCA1
location: join(612354..612697,613162..613296,613528..613665,614338..614443,614922..615122,615335..615522,616348..616447,617152..617292)
location: region:612354-617292:1
so has part: feature:612354-612697:1:exon
so has part: feature:613162-613296:1:exon
so has part: feature:613528-613665:1:exon
so has part: feature:614338-614443:1:exon
so has part: feature:614922-615122:1:exon
so has part: feature:615335-615522:1:exon
so has part: feature:616348-616447:1:exon
so has part: feature:617152-617292:1:exon

XP_040390614.1
type: Protein
SIO_000068: ncbiprotein

position:612354:1
position: 612354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617292:1
position: 617292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612354-612697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:613162-613296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:613528-613665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614338-614443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:614922-615122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615335-615522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616348-616447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:617152-617292:1:exon

PITHD1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PITHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(617907..634718)
location: region:617907-634718:-1
so has part: feature:617907-634718:-1:exon
subclass of: SO_0000010

121059017
type: Gene
SIO_000068: ncbigene

position:617907:-1
position: 617907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634718:-1
position: 634718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617907-634718:-1:exon

PITHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PITHD1
product: PITH domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535275.1
SIO_010081: PITHD1
subclass of: SO_0000673
so part of: PITHD1
location: complement(join(617907..617954,632177..632287,632496..632604,633128..633232,634199..634276,634354..634397,634498..634718))
location: region:617907-634718:-1
so has part: feature:634498-634718:-1:exon
so has part: feature:634354-634397:-1:exon
so has part: feature:634199-634276:-1:exon
so has part: feature:633128-633232:-1:exon
so has part: feature:632496-632604:-1:exon
so has part: feature:632177-632287:-1:exon
so has part: feature:617907-617954:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634498-634718:-1:exon

position:634498:-1
position: 634498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634354-634397:-1:exon

position:634354:-1
position: 634354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634397:-1
position: 634397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634199-634276:-1:exon

position:634199:-1
position: 634199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634276:-1
position: 634276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633128-633232:-1:exon

position:633128:-1
position: 633128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633232:-1
position: 633232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:632496-632604:-1:exon

position:632496:-1
position: 632496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632604:-1
position: 632604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:632177-632287:-1:exon

position:632177:-1
position: 632177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632287:-1
position: 632287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:617907-617954:-1:exon

position:617954:-1
position: 617954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMGCL
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HMGCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 618064..622201
location: region:618064-622201:1
so has part: feature:618064-622201:1:exon
subclass of: SO_0000010

121059013
type: Gene
SIO_000068: ncbigene

position:618064:1
position: 618064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622201:1
position: 622201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618064-622201:1:exon

HMGCL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HMGCL
product: 3-hydroxy-3-methylglutaryl-CoA lyase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535269.1
SIO_010081: HMGCL
subclass of: SO_0000673
so part of: HMGCL
location: join(618064..618155,618320..618403,618507..618614,619024..619119,619649..619797,620389..620452,620792..620980,621117..621242,621563..622201)
location: region:618064-622201:1
so has part: feature:618064-618155:1:exon
so has part: feature:618320-618403:1:exon
so has part: feature:618507-618614:1:exon
so has part: feature:619024-619119:1:exon
so has part: feature:619649-619797:1:exon
so has part: feature:620389-620452:1:exon
so has part: feature:620792-620980:1:exon
so has part: feature:621117-621242:1:exon
so has part: feature:621563-622201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618064-618155:1:exon

position:618155:1
position: 618155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618320-618403:1:exon

position:618320:1
position: 618320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618403:1
position: 618403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:618507-618614:1:exon

position:618507:1
position: 618507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618614:1
position: 618614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:619024-619119:1:exon

position:619024:1
position: 619024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619119:1
position: 619119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:619649-619797:1:exon

position:619649:1
position: 619649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619797:1
position: 619797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620389-620452:1:exon

position:620389:1
position: 620389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620452:1
position: 620452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:620792-620980:1:exon

position:620792:1
position: 620792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620980:1
position: 620980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:621117-621242:1:exon

position:621117:1
position: 621117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621242:1
position: 621242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:621563-622201:1:exon

position:621563:1
position: 621563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMGCL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HMGCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxymethylglutaryl-CoA lyase, mitochondrial
translation: MAAARRLLPRWAGSLRPIGAAAAGALPPRVKVVEVGPRDGLQNEQSIVPTAVKIGLIDMLSGTGLRVIEATSFVSPRWVPQMADHAEVMQGINKLPGVSYPVLTPNLKGFQAAVAAGAKEVSIFGAASELFTKKNINCSIEESLERFSEVMSAARAASIPVRGYVSCVLGCPYEGKISAAKVAEVSKKMYSMGCYEISLGDTIGIGTPGSMREMLTAVMKEVPVGALAVHCHDTYGQALANILVALQMGVSVVDASVAGLGGCPYAKGASGNVATEDLVYMLNGLGIHTGVDLQKLMDTGTFICNALNRRTNSKVSQASCRL
SIO_010081: HMGCL
subclass of: SO_0000673
so part of: HMGCL
location: join(618105..618155,618320..618403,618507..618614,619024..619119,619649..619797,620389..620452,620792..620980,621117..621242,621563..621664)
location: region:618105-621664:1
so has part: feature:618105-618155:1:exon
so has part: feature:618320-618403:1:exon
so has part: feature:618507-618614:1:exon
so has part: feature:619024-619119:1:exon
so has part: feature:619649-619797:1:exon
so has part: feature:620389-620452:1:exon
so has part: feature:620792-620980:1:exon
so has part: feature:621117-621242:1:exon
so has part: feature:621563-621664:1:exon

XP_040391203.1
type: Protein
SIO_000068: ncbiprotein

position:618105:1
position: 618105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621664:1
position: 621664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618105-618155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618320-618403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618507-618614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619024-619119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619649-619797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620389-620452:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620792-620980:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621117-621242:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621563-621664:1:exon

GALE
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GALE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 622595..625916
location: region:622595-625916:1
so has part: feature:622595-625916:1:exon
subclass of: SO_0000010

121059012
type: Gene
SIO_000068: ncbigene

position:622595:1
position: 622595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625916:1
position: 625916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622595-625916:1:exon

GALE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GALE
product: UDP-galactose-4-epimerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535268.1
SIO_010081: GALE
subclass of: SO_0000673
so part of: GALE
location: join(622595..622762,623034..623149,623400..623513,623654..623830,623955..624068,624164..624230,624341..624426,624544..624621,624762..624876,624964..625916)
location: region:622595-625916:1
so has part: feature:622595-622762:1:exon
so has part: feature:623034-623149:1:exon
so has part: feature:623400-623513:1:exon
so has part: feature:623654-623830:1:exon
so has part: feature:623955-624068:1:exon
so has part: feature:624164-624230:1:exon
so has part: feature:624341-624426:1:exon
so has part: feature:624544-624621:1:exon
so has part: feature:624762-624876:1:exon
so has part: feature:624964-625916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622595-622762:1:exon

position:622762:1
position: 622762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623034-623149:1:exon

position:623034:1
position: 623034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623149:1
position: 623149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623400-623513:1:exon

position:623400:1
position: 623400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623513:1
position: 623513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623654-623830:1:exon

position:623654:1
position: 623654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623830:1
position: 623830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:623955-624068:1:exon

position:623955:1
position: 623955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624068:1
position: 624068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:624164-624230:1:exon

position:624164:1
position: 624164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624230:1
position: 624230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:624341-624426:1:exon

position:624341:1
position: 624341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624426:1
position: 624426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:624544-624621:1:exon

position:624544:1
position: 624544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624621:1
position: 624621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:624762-624876:1:exon

position:624762:1
position: 624762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624876:1
position: 624876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:624964-625916:1:exon

position:624964:1
position: 624964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GALE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucose 4-epimerase
translation: MAEQVLVTGGAGYIGSHCVLQLAEAGYAPVVVDNLHNAIRGPDALPESLRRVQLLARRPIAFHELDVTDGAALRELFGKHRFSAVVHFAGLKAVGESVRQPLEYDRVNLTGTIRLLEAMKAHGVKNIVFSSSATVYGDPKYLPLDENHPVGGCTNPYGKSKYFIEEMIRDLCKAEKDWNAVLLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRREFLSVFGNDYETIDGTGVRDYIHVVDLAKGHIAALKKLKENCGCKIYNLGTGTGYSVLQMVRAMEKASGREIKYKFTGRREGDVASCYANPELAERELGWKAAFGLDKMCEDLWRWQLQNPTGFSKN
SIO_010081: GALE
subclass of: SO_0000673
so part of: GALE
location: join(622642..622762,623034..623149,623400..623513,623654..623830,623955..624068,624164..624230,624341..624426,624544..624621,624762..624876,624964..625019)
location: region:622642-625019:1
so has part: feature:622642-622762:1:exon
so has part: feature:623034-623149:1:exon
so has part: feature:623400-623513:1:exon
so has part: feature:623654-623830:1:exon
so has part: feature:623955-624068:1:exon
so has part: feature:624164-624230:1:exon
so has part: feature:624341-624426:1:exon
so has part: feature:624544-624621:1:exon
so has part: feature:624762-624876:1:exon
so has part: feature:624964-625019:1:exon

XP_040391202.1
type: Protein
SIO_000068: ncbiprotein

position:622642:1
position: 622642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625019:1
position: 625019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622642-622762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623034-623149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623400-623513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623654-623830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623955-624068:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:624164-624230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:624341-624426:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:624544-624621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:624762-624876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624964-625019:1:exon

LOC121059011
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 626057..627522
location: region:626057-627522:1
so has part: feature:626057-627522:1:exon
subclass of: SO_0000010

121059011
type: Gene
SIO_000068: ncbigene

position:626057:1
position: 626057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627522:1
position: 627522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626057-627522:1:exon

LOC121059011
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059011
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535267.1
SIO_010081: LOC121059011
subclass of: SO_0000673
so part of: LOC121059011
location: join(626057..626325,626384..627522)
location: region:626057-627522:1
so has part: feature:626057-626325:1:exon
so has part: feature:626384-627522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626057-626325:1:exon

position:626325:1
position: 626325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626384-627522:1:exon

position:626384:1
position: 626384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121059011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MVYLTLWLTLWNTHTHKKIPNVYKEDKERREKKKKRGWGGARRGEESCGEEWREAARPPAVPARPRSVPLTRSGQNALQRGHRGLPASAHGPAARGELWSRPRQPLAALPPRPGAQQLYREKAEGAAAPNPKHAEEPGPPRCQQQLCWFKTSPRKRRKPKTTQETKGGSDRAGSPESGLLLCTSQAGRAGPEPPAALAPPREVPAPSPGVPRGSAGRGQDRARTSPHRASGPGRAAALSPEGLEAFGFLKDVSSSSPAGPRSAVGSAQGGEARRRAAPLNSECPRPCGRGGGSREPPGSPPAGCHGPAPLPVQPVPQRSWPGRGKAWAAASSQLGEGARPGPGQPLIAHGKPTGPQPPPGHGAAPRPRAAPQEGHGGSRAVLVR
SIO_010081: LOC121059011
subclass of: SO_0000673
so part of: LOC121059011
location: join(626057..626325,626384..627269)
location: region:626057-627269:1
so has part: feature:626057-626325:1:exon
so has part: feature:626384-627269:1:exon

XP_040391201.1
type: Protein
SIO_000068: ncbiprotein

position:627269:1
position: 627269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626057-626325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626384-627269:1:exon

LYPLA2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LYPLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(627415..631953)
location: region:627415-631953:-1
so has part: feature:627415-631953:-1:exon
subclass of: SO_0000010

121059015
type: Gene
SIO_000068: ncbigene

position:627415:-1
position: 627415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631953:-1
position: 631953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627415-631953:-1:exon

LYPLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LYPLA2
product: lysophospholipase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535271.1
SIO_010081: LYPLA2
subclass of: SO_0000673
so part of: LYPLA2
location: complement(join(627415..628254,628389..628565,628719..628820,628911..628984,629251..629321,629499..629546,629737..629802,630372..630403,630902..631007,631804..631953))
location: region:627415-631953:-1
so has part: feature:631804-631953:-1:exon
so has part: feature:630902-631007:-1:exon
so has part: feature:630372-630403:-1:exon
so has part: feature:629737-629802:-1:exon
so has part: feature:629499-629546:-1:exon
so has part: feature:629251-629321:-1:exon
so has part: feature:628911-628984:-1:exon
so has part: feature:628719-628820:-1:exon
so has part: feature:628389-628565:-1:exon
so has part: feature:627415-628254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631804-631953:-1:exon

position:631804:-1
position: 631804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:630902-631007:-1:exon

position:630902:-1
position: 630902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631007:-1
position: 631007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:630372-630403:-1:exon

position:630372:-1
position: 630372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630403:-1
position: 630403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:629737-629802:-1:exon

position:629737:-1
position: 629737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629802:-1
position: 629802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:629499-629546:-1:exon

position:629499:-1
position: 629499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629546:-1
position: 629546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:629251-629321:-1:exon

position:629251:-1
position: 629251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629321:-1
position: 629321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:628911-628984:-1:exon

position:628911:-1
position: 628911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628984:-1
position: 628984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:628719-628820:-1:exon

position:628719:-1
position: 628719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628820:-1
position: 628820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:628389-628565:-1:exon

position:628389:-1
position: 628389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628565:-1
position: 628565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:627415-628254:-1:exon

position:628254:-1
position: 628254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LYPLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LYPLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-protein thioesterase 2
translation: MCGNNMSVPLLADAVTVSGAERETAAVIFLHGLGDTGHSWADALSSIRLPYVKYICPHAPRIPVTLNMKMVMPSWFDLMGLTPDAPEDEAGIKKAAENIKAIIEHEMKNGIPPNRIILGGFSQGGALSLYTALTCQHQLAGIVALSCWLPLHKAFPQAASNGVNKDIAILQCHGEMDPMIPVRFGALTAEKLKSVVTPAKVQFKTYPGVMHSSCPQEMLAVKEFIEKLLPRI
SIO_010081: LYPLA2
subclass of: SO_0000673
so part of: LYPLA2
location: complement(join(628204..628254,628389..628565,628719..628820,628911..628984,629251..629321,629499..629546,629737..629802,630372..630403,630902..630979))
location: region:628204-630979:-1
so has part: feature:630902-630979:-1:exon
so has part: feature:630372-630403:-1:exon
so has part: feature:629737-629802:-1:exon
so has part: feature:629499-629546:-1:exon
so has part: feature:629251-629321:-1:exon
so has part: feature:628911-628984:-1:exon
so has part: feature:628719-628820:-1:exon
so has part: feature:628389-628565:-1:exon
so has part: feature:628204-628254:-1:exon

XP_040391205.1
type: Protein
SIO_000068: ncbiprotein

position:628204:-1
position: 628204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630979:-1
position: 630979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630902-630979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630372-630403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629737-629802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629499-629546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:629251-629321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628911-628984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628719-628820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628389-628565:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:628204-628254:-1:exon

PITHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PITHD1
product: PITH domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535274.1
SIO_010081: PITHD1
subclass of: SO_0000673
so part of: PITHD1
location: complement(join(632068..632287,632496..632604,633128..633232,634199..634276,634354..634397,634498..634718))
location: region:632068-634718:-1
so has part: feature:634498-634718:-1:exon
so has part: feature:634354-634397:-1:exon
so has part: feature:634199-634276:-1:exon
so has part: feature:633128-633232:-1:exon
so has part: feature:632496-632604:-1:exon
so has part: feature:632068-632287:-1:exon

position:632068:-1
position: 632068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634498-634718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634354-634397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634199-634276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633128-633232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632496-632604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632068-632287:-1:exon

PITHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PITHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PITH domain-containing protein 1
translation: MAQGPAHGPGRCCCCGAGGGGERGAAWGLHLRIDRQRLHCLNERRDGSGALVFRAWEERGDRGKFVESDEDAELLFNVPFTGSVKLKGVIVMGEDDGSHPAEMRLFKNIPHMSFDDAAREPDQMFSLNRDPTGELEYPTKVARFSSVNHLSIHFPKNFGAETTKIFYIGLKGEWTEAARHEVTICSYEAAPNPAEHRLQQLTPQTHFIS
SIO_010081: PITHD1
subclass of: SO_0000673
so part of: PITHD1
location: complement(join(632186..632287,632496..632604,633128..633232,634199..634276,634354..634397,634498..634689))
location: region:632186-634689:-1
so has part: feature:634498-634689:-1:exon
so has part: feature:634354-634397:-1:exon
so has part: feature:634199-634276:-1:exon
so has part: feature:633128-633232:-1:exon
so has part: feature:632496-632604:-1:exon
so has part: feature:632186-632287:-1:exon

XP_040391208.1
type: Protein
SIO_000068: ncbiprotein

position:632186:-1
position: 632186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634689:-1
position: 634689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634498-634689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634354-634397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634199-634276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633128-633232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632496-632604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632186-632287:-1:exon

PITHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PITHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PITH domain-containing protein 1
translation: MAQGPAHGPGRCCCCGAGGGGERGAAWGLHLRIDRQRLHCLNERRDGSGALVFRAWEERGDRGKFVESDEDAELLFNVPFTGSVKLKGVIVMGEDDGSHPAEMRLFKNIPHMSFDDAAREPDQMFSLNRDPTGELEYPTKVARFSSVNHLSIHFPKNFGAETTKIFYIGLKGEWTEAARHEVTICSYEAAPNPAEHRLQQLTPQTHFIS
SIO_010081: PITHD1
subclass of: SO_0000673
so part of: PITHD1
location: complement(join(632186..632287,632496..632604,633128..633232,634199..634276,634354..634397,634498..634689))
location: region:632186-634689:-1
so has part: feature:634498-634689:-1:exon
so has part: feature:634354-634397:-1:exon
so has part: feature:634199-634276:-1:exon
so has part: feature:633128-633232:-1:exon
so has part: feature:632496-632604:-1:exon
so has part: feature:632186-632287:-1:exon

XP_040391209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634498-634689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634354-634397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634199-634276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633128-633232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632496-632604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632186-632287:-1:exon

ELOA
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ELOA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(635974..648103)
location: region:635974-648103:-1
so has part: feature:635974-648103:-1:exon
subclass of: SO_0000010

121059007
type: Gene
SIO_000068: ncbigene

position:635974:-1
position: 635974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648103:-1
position: 648103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635974-648103:-1:exon

ELOA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ELOA
product: elongin A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 186 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535261.1
SIO_010081: ELOA
subclass of: SO_0000673
so part of: ELOA
location: complement(join(635974..636986,637629..637780,638100..638211,638749..638929,639241..639338,639578..639733,640232..640346,641641..642859,643734..643852,644428..644484,647810..648103))
location: region:635974-648103:-1
so has part: feature:647810-648103:-1:exon
so has part: feature:644428-644484:-1:exon
so has part: feature:643734-643852:-1:exon
so has part: feature:641641-642859:-1:exon
so has part: feature:640232-640346:-1:exon
so has part: feature:639578-639733:-1:exon
so has part: feature:639241-639338:-1:exon
so has part: feature:638749-638929:-1:exon
so has part: feature:638100-638211:-1:exon
so has part: feature:637629-637780:-1:exon
so has part: feature:635974-636986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647810-648103:-1:exon

position:647810:-1
position: 647810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:644428-644484:-1:exon

position:644428:-1
position: 644428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644484:-1
position: 644484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:643734-643852:-1:exon

position:643734:-1
position: 643734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643852:-1
position: 643852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641641-642859:-1:exon

position:641641:-1
position: 641641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642859:-1
position: 642859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:640232-640346:-1:exon

position:640232:-1
position: 640232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640346:-1
position: 640346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:639578-639733:-1:exon

position:639578:-1
position: 639578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639733:-1
position: 639733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:639241-639338:-1:exon

position:639241:-1
position: 639241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639338:-1
position: 639338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:638749-638929:-1:exon

position:638749:-1
position: 638749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638929:-1
position: 638929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:638100-638211:-1:exon

position:638100:-1
position: 638100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638211:-1
position: 638211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:637629-637780:-1:exon

position:637629:-1
position: 637629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637780:-1
position: 637780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:635974-636986:-1:exon

position:636986:-1
position: 636986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELOA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ELOA
product: elongin A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040535260.1
SIO_010081: ELOA
subclass of: SO_0000673
so part of: ELOA
location: complement(join(635974..636986,637629..637780,638100..638211,638749..638929,639241..639338,639578..639730,640232..640346,641641..642859,643734..643852,644428..644484,647810..647986))
location: region:635974-647986:-1
so has part: feature:647810-647986:-1:exon
so has part: feature:644428-644484:-1:exon
so has part: feature:643734-643852:-1:exon
so has part: feature:641641-642859:-1:exon
so has part: feature:640232-640346:-1:exon
so has part: feature:639578-639730:-1:exon
so has part: feature:639241-639338:-1:exon
so has part: feature:638749-638929:-1:exon
so has part: feature:638100-638211:-1:exon
so has part: feature:637629-637780:-1:exon
so has part: feature:635974-636986:-1:exon

position:647986:-1
position: 647986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647810-647986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:644428-644484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643734-643852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641641-642859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:640232-640346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639578-639730:-1:exon

position:639730:-1
position: 639730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:639241-639338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638749-638929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638100-638211:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637629-637780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635974-636986:-1:exon

ELOA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ELOA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin-A isoform X2
translation: MAPARRCPHPPWPPPAGQRRATSASRPHPRWRRRPGSAVWRAGGEAASAAAARPAVKMAESVLEVVGRLQSRLAGSSEPKKLLKSLKRLSELPITVDILVETGVGKTVNGLRKHELVGDFAKNLVARWKKLVPVSQEADRNNLDSEDRDYERSSSRKKQREPSPREDEEHDQDYSEPFQPSCSQSYSPDHREKKSKRYSGPERAHETYDYSSQEDKGWSRSSPALSSDQEYSDYGQAVSPEPSESPQDMYTDPYASEEQEEPAVFHQKAGKGHGFQEKLGGSRERNPGEFHDKGNVSRNKEHKASHKEKQRLDGRVEDRTSAFSPERSHKTSFKEHLRESPVAGCSKEKQRMSDGTKKEKSRESSSSRKEKLHVQPHLQESPDNHVKKRKHRDADKSKLEKSKPGLETSSREREKRRAESDSSNRVKEKGISGSLKTSEGKHKASEVDKKSVGFSSSFGEGEVEDEFEQPTMSFESYLSYDQPQKKKKKVAKPSVPAGEKDQGHSKQNGSKASTKSSSSSRKSPSHKRTSEKKAEKKQPEPPKPNRILIDVVPTLPDIPLPPIQANYRPLPSIESITCSQTKRKAVSSPVEESEAGFTGRRLNSKMQVYSGSKTAYLPKMMTLHEQCIRVLSNNIDSIYEVGGVPFSVLEPVLERCTPEQLYRIEECNHVLIEDTDQLWHNHCLRDFKNEKPEEFESWREMYLRLHDAREQRLLMLARNIGSAHANKPKGRVAKMAFVNSAVKPPRDVRRRQEKFGTGGALLPEKTKIKPVFYTSGKSHARVSEEQSYDGPSTSSAHSVPSSGSTFSSYDPRKPPVKKIAPMMAKTIKAFKNRFSRR
SIO_010081: ELOA
subclass of: SO_0000673
so part of: ELOA
location: complement(join(636925..636986,637629..637780,638100..638211,638749..638929,639241..639338,639578..639733,640232..640346,641641..642859,643734..643852,644428..644484,647810..648052))
location: region:636925-648052:-1
so has part: feature:647810-648052:-1:exon
so has part: feature:644428-644484:-1:exon
so has part: feature:643734-643852:-1:exon
so has part: feature:641641-642859:-1:exon
so has part: feature:640232-640346:-1:exon
so has part: feature:639578-639733:-1:exon
so has part: feature:639241-639338:-1:exon
so has part: feature:638749-638929:-1:exon
so has part: feature:638100-638211:-1:exon
so has part: feature:637629-637780:-1:exon
so has part: feature:636925-636986:-1:exon

XP_040391195.1
type: Protein
SIO_000068: ncbiprotein

position:636925:-1
position: 636925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648052:-1
position: 648052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647810-648052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:644428-644484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643734-643852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641641-642859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:640232-640346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639578-639733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639241-639338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638749-638929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638100-638211:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637629-637780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:636925-636986:-1:exon

ELOA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ELOA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin-A isoform X1
translation: MAESVLEVVGRLQSRLAGSSEPKKLLKSLKRLSELPITVDILVETGVGKTVNGLRKHELVGDFAKNLVARWKKLVPVSQEADRNNLDSEDRDYERSSSRKKQREPSPREDEEHDQDYSEPFQPSCSQSYSPDHREKKSKRYSGPERAHETYDYSSQEDKGWSRSSPALSSDQEYSDYGQAVSPEPSESPQDMYTDPYASEEQEEPAVFHQKAGKGHGFQEKLGGSRERNPGEFHDKGNVSRNKEHKASHKEKQRLDGRVEDRTSAFSPERSHKTSFKEHLRESPVAGCSKEKQRMSDGTKKEKSRESSSSRKEKLHVQPHLQESPDNHVKKRKHRDADKSKLEKSKPGLETSSREREKRRAESDSSNRVKEKGISGSLKTSEGKHKASEVDKKSVGFSSSFGEGEVEDEFEQPTMSFESYLSYDQPQKKKKKVAKPSVPAGEKDQGHSKQNGSKASTKSSSSSRKSPSHKRTSEKKAEKKQPEPPKPNRILIDVVPTLPDIPLPPIQANYRPLPSIESITCSQTKRKVSSPVEESEAGFTGRRLNSKMQVYSGSKTAYLPKMMTLHEQCIRVLSNNIDSIYEVGGVPFSVLEPVLERCTPEQLYRIEECNHVLIEDTDQLWHNHCLRDFKNEKPEEFESWREMYLRLHDAREQRLLMLARNIGSAHANKPKGRVAKMAFVNSAVKPPRDVRRRQEKFGTGGALLPEKTKIKPVFYTSGKSHARVSEEQSYDGPSTSSAHSVPSSGSTFSSYDPRKPPVKKIAPMMAKTIKAFKNRFSRR
SIO_010081: ELOA
subclass of: SO_0000673
so part of: ELOA
location: complement(join(636925..636986,637629..637780,638100..638211,638749..638929,639241..639338,639578..639730,640232..640346,641641..642859,643734..643852,644428..644484,647810..647881))
location: region:636925-647881:-1
so has part: feature:647810-647881:-1:exon
so has part: feature:644428-644484:-1:exon
so has part: feature:643734-643852:-1:exon
so has part: feature:641641-642859:-1:exon
so has part: feature:640232-640346:-1:exon
so has part: feature:639578-639730:-1:exon
so has part: feature:639241-639338:-1:exon
so has part: feature:638749-638929:-1:exon
so has part: feature:638100-638211:-1:exon
so has part: feature:637629-637780:-1:exon
so has part: feature:636925-636986:-1:exon

XP_040391194.1
type: Protein
SIO_000068: ncbiprotein

position:647881:-1
position: 647881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647810-647881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:644428-644484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643734-643852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641641-642859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:640232-640346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639578-639730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639241-639338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638749-638929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638100-638211:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637629-637780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:636925-636986:-1:exon

RPL11
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RPL11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(649220..652659)
location: region:649220-652659:-1
so has part: feature:649220-652659:-1:exon
subclass of: SO_0000010

121059016
type: Gene
SIO_000068: ncbigene

position:649220:-1
position: 649220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652659:-1
position: 652659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649220-652659:-1:exon

RPL11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RPL11
product: ribosomal protein L11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535272.1
SIO_010081: RPL11
subclass of: SO_0000673
so part of: RPL11
location: complement(join(649220..649295,650258..650368,651106..651237,651635..651741,652055..652205,652504..652659))
location: region:649220-652659:-1
so has part: feature:652504-652659:-1:exon
so has part: feature:652055-652205:-1:exon
so has part: feature:651635-651741:-1:exon
so has part: feature:651106-651237:-1:exon
so has part: feature:650258-650368:-1:exon
so has part: feature:649220-649295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:652504-652659:-1:exon

position:652504:-1
position: 652504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:652055-652205:-1:exon

position:652055:-1
position: 652055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652205:-1
position: 652205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:651635-651741:-1:exon

position:651635:-1
position: 651635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651741:-1
position: 651741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:651106-651237:-1:exon

position:651106:-1
position: 651106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651237:-1
position: 651237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:650258-650368:-1:exon

position:650258:-1
position: 650258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650368:-1
position: 650368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:649220-649295:-1:exon

position:649295:-1
position: 649295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RPL11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L11
translation: MAAGTRGCQATCPGGGAGPASGRQGALPPHKAPRRGGARLFPASAMAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGNIGAKHRIGKEEAMRWFQQKYDGIILPGK
SIO_010081: RPL11
subclass of: SO_0000673
so part of: RPL11
location: complement(join(649266..649295,650258..650368,651106..651237,651635..651741,652055..652205,652504..652644))
location: region:649266-652644:-1
so has part: feature:652504-652644:-1:exon
so has part: feature:652055-652205:-1:exon
so has part: feature:651635-651741:-1:exon
so has part: feature:651106-651237:-1:exon
so has part: feature:650258-650368:-1:exon
so has part: feature:649266-649295:-1:exon

XP_040391206.1
type: Protein
SIO_000068: ncbiprotein

position:649266:-1
position: 649266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652644:-1
position: 652644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652504-652644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652055-652205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651635-651741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651106-651237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650258-650368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649266-649295:-1:exon

LOC121059010
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(652874..656748)
location: region:652874-656748:-1
so has part: feature:652874-656748:-1:exon
subclass of: SO_0000010

121059010
type: Gene
SIO_000068: ncbigene

position:652874:-1
position: 652874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656748:-1
position: 656748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652874-656748:-1:exon

LOC121059010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059010
product: sodium-dependent phosphate transport protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040535266.1
SIO_010081: LOC121059010
subclass of: SO_0000673
so part of: LOC121059010
location: complement(join(652874..653143,653657..653747,654092..654239,654322..654487,654653..654814,655002..655120,655480..655566,655703..655790,655869..656102,656336..656493,656620..656748))
location: region:652874-656748:-1
so has part: feature:656620-656748:-1:exon
so has part: feature:656336-656493:-1:exon
so has part: feature:655869-656102:-1:exon
so has part: feature:655703-655790:-1:exon
so has part: feature:655480-655566:-1:exon
so has part: feature:655002-655120:-1:exon
so has part: feature:654653-654814:-1:exon
so has part: feature:654322-654487:-1:exon
so has part: feature:654092-654239:-1:exon
so has part: feature:653657-653747:-1:exon
so has part: feature:652874-653143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656620-656748:-1:exon

position:656620:-1
position: 656620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656336-656493:-1:exon

position:656336:-1
position: 656336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656493:-1
position: 656493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:655869-656102:-1:exon

position:655869:-1
position: 655869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656102:-1
position: 656102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:655703-655790:-1:exon

position:655703:-1
position: 655703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655790:-1
position: 655790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:655480-655566:-1:exon

position:655480:-1
position: 655480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655566:-1
position: 655566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:655002-655120:-1:exon

position:655002:-1
position: 655002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655120:-1
position: 655120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:654653-654814:-1:exon

position:654653:-1
position: 654653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654814:-1
position: 654814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:654322-654487:-1:exon

position:654322:-1
position: 654322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654487:-1
position: 654487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:654092-654239:-1:exon

position:654092:-1
position: 654092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654239:-1
position: 654239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:653657-653747:-1:exon

position:653657:-1
position: 653657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653747:-1
position: 653747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:652874-653143:-1:exon

position:653143:-1
position: 653143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059010
product: sodium-dependent phosphate transport protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535264.1
SIO_010081: LOC121059010
subclass of: SO_0000673
so part of: LOC121059010
location: complement(join(652874..653143,653657..653747,654092..654239,654322..654547,654653..654814,655002..655120,655480..655566,655703..655790,655869..656102,656336..656493,656620..656748))
location: region:652874-656748:-1
so has part: feature:656620-656748:-1:exon
so has part: feature:656336-656493:-1:exon
so has part: feature:655869-656102:-1:exon
so has part: feature:655703-655790:-1:exon
so has part: feature:655480-655566:-1:exon
so has part: feature:655002-655120:-1:exon
so has part: feature:654653-654814:-1:exon
so has part: feature:654322-654547:-1:exon
so has part: feature:654092-654239:-1:exon
so has part: feature:653657-653747:-1:exon
so has part: feature:652874-653143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656620-656748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656336-656493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655869-656102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655703-655790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655480-655566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655002-655120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654653-654814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654322-654547:-1:exon

position:654547:-1
position: 654547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:654092-654239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:653657-653747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:652874-653143:-1:exon

LOC121059010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 3-like isoform X2
translation: MERAAGSAEAPHEAAPLLPRPPAPGSGPCSARCALALLAHGALLVAYALRAALSIAIIAITGGSPPGGNRSAPGPRPPQAPAYNWSAETQGIILSSFFYGYGLTQALGGYGAGLFGGKLVLGSGLLLSSALTLLVPRAAELGVGVLVGLQALLGLAQGVIFPAQYALWAKWAPPLERSRLMNIADAGCTFGTFSALLVAGIICQSLGWPLVFYIFGGVGCAWCLCWFLLVYEDPASHPWISAGEREYIVSSLAHQGSSHGRSLPLGAMAKSLPLWAIAIACFCTDWLFYMLLTSMPTFMSNVLHFDLREGSESASFPALQNGLLSSLPYIGNGLGHILAGLLADFLLAQRVLGTAAVRKLFSALGMLLPSVFLVVVPYIGSSSTAAVVLLTLALTIISMTGAGININHIDIAPRYAGFLLGVTNTFGIIAGIIAPTAVGLLVSQDLQAGWRNAFFAAAALNVFGLIFYVAFGSGTVQGWAREEPAAP
SIO_010081: LOC121059010
subclass of: SO_0000673
so part of: LOC121059010
location: complement(join(653012..653143,653657..653747,654092..654239,654322..654487,654653..654814,655002..655120,655480..655566,655703..655790,655869..656102,656336..656493,656620..656698))
location: region:653012-656698:-1
so has part: feature:656620-656698:-1:exon
so has part: feature:656336-656493:-1:exon
so has part: feature:655869-656102:-1:exon
so has part: feature:655703-655790:-1:exon
so has part: feature:655480-655566:-1:exon
so has part: feature:655002-655120:-1:exon
so has part: feature:654653-654814:-1:exon
so has part: feature:654322-654487:-1:exon
so has part: feature:654092-654239:-1:exon
so has part: feature:653657-653747:-1:exon
so has part: feature:653012-653143:-1:exon

XP_040391200.1
type: Protein
SIO_000068: ncbiprotein

position:653012:-1
position: 653012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656698:-1
position: 656698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656620-656698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656336-656493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655869-656102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655703-655790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655480-655566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655002-655120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654653-654814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654322-654487:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654092-654239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:653657-653747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:653012-653143:-1:exon

LOC121059010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 3-like isoform X1
translation: MERAAGSAEAPHEAAPLLPRPPAPGSGPCSARCALALLAHGALLVAYALRAALSIAIIAITGGSPPGGNRSAPGPRPPQAPAYNWSAETQGIILSSFFYGYGLTQALGGYGAGLFGGKLVLGSGLLLSSALTLLVPRAAELGVGVLVGLQALLGLAQGVIFPAQYALWAKWAPPLERSRLMNIADAGCTFGTFSALLVAGIICQSLGWPLVFYIFGGVGCAWCLCWFLLVYEDPASHPWISAGEREYIVSSLAHQGSSHGRSLPLGAMAKSLPLWAIAIACFCTDWLFYMLLTSMPTFMSNVLHFDLREWLWDRWCCSLRAPGCVASCQGSESASFPALQNGLLSSLPYIGNGLGHILAGLLADFLLAQRVLGTAAVRKLFSALGMLLPSVFLVVVPYIGSSSTAAVVLLTLALTIISMTGAGININHIDIAPRYAGFLLGVTNTFGIIAGIIAPTAVGLLVSQDLQAGWRNAFFAAAALNVFGLIFYVAFGSGTVQGWAREEPAAP
SIO_010081: LOC121059010
subclass of: SO_0000673
so part of: LOC121059010
location: complement(join(653012..653143,653657..653747,654092..654239,654322..654547,654653..654814,655002..655120,655480..655566,655703..655790,655869..656102,656336..656493,656620..656698))
location: region:653012-656698:-1
so has part: feature:656620-656698:-1:exon
so has part: feature:656336-656493:-1:exon
so has part: feature:655869-656102:-1:exon
so has part: feature:655703-655790:-1:exon
so has part: feature:655480-655566:-1:exon
so has part: feature:655002-655120:-1:exon
so has part: feature:654653-654814:-1:exon
so has part: feature:654322-654547:-1:exon
so has part: feature:654092-654239:-1:exon
so has part: feature:653657-653747:-1:exon
so has part: feature:653012-653143:-1:exon

XP_040391198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:656620-656698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656336-656493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655869-656102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655703-655790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655480-655566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655002-655120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654653-654814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654322-654547:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654092-654239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:653657-653747:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:653012-653143:-1:exon

PPT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 656933..661746
location: region:656933-661746:1
so has part: feature:656933-661746:1:exon
subclass of: SO_0000010

121059014
type: Gene
SIO_000068: ncbigene

position:656933:1
position: 656933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661746:1
position: 661746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656933-661746:1:exon

PPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PPT1
product: palmitoyl-protein thioesterase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535270.1
SIO_010081: PPT1
subclass of: SO_0000673
so part of: PPT1
location: join(656933..657095,657201..657310,658094..658221,658514..658584,659401..659503,659580..659670,660157..660255,660476..660547,661012..661746)
location: region:656933-661746:1
so has part: feature:656933-657095:1:exon
so has part: feature:657201-657310:1:exon
so has part: feature:658094-658221:1:exon
so has part: feature:658514-658584:1:exon
so has part: feature:659401-659503:1:exon
so has part: feature:659580-659670:1:exon
so has part: feature:660157-660255:1:exon
so has part: feature:660476-660547:1:exon
so has part: feature:661012-661746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656933-657095:1:exon

position:657095:1
position: 657095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:657201-657310:1:exon

position:657201:1
position: 657201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657310:1
position: 657310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:658094-658221:1:exon

position:658094:1
position: 658094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658221:1
position: 658221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:658514-658584:1:exon

position:658514:1
position: 658514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658584:1
position: 658584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:659401-659503:1:exon

position:659401:1
position: 659401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659503:1
position: 659503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:659580-659670:1:exon

position:659580:1
position: 659580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659670:1
position: 659670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:660157-660255:1:exon

position:660157:1
position: 660157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660255:1
position: 660255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:660476-660547:1:exon

position:660476:1
position: 660476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660547:1
position: 660547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:661012-661746:1:exon

position:661012:1
position: 661012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyl-protein thioesterase 1
translation: MAALGAAVPLLLLGLGPGLGLGRAAPPVVLWHGMGDSCCNPRSMGYIRGVLQRRLPGTYVLALRLGASPLQDVENSFFMNANDQVREVCSQLAKDPHLKGGYNAIGFSQGGQFLRAVAQRCPSPPMFNLISVGGQHQGVYGFPRCPGESSHICDWIRKTLDLGAYTQAVQEHLVQAEYWHDPLREEDYRKNSIFLADINQERGINETYKKNLRALKKFVMVKFLNDTMVDPPISEWFGFYKSGQAKETVPLRETPLYTEDRLGLQEMDKAGKLVFLGVDGDHLQFSEEWFCTTILPFLQ
SIO_010081: PPT1
subclass of: SO_0000673
so part of: PPT1
location: join(656993..657095,657201..657310,658094..658221,658514..658584,659401..659503,659580..659670,660157..660255,660476..660547,661012..661134)
location: region:656993-661134:1
so has part: feature:656993-657095:1:exon
so has part: feature:657201-657310:1:exon
so has part: feature:658094-658221:1:exon
so has part: feature:658514-658584:1:exon
so has part: feature:659401-659503:1:exon
so has part: feature:659580-659670:1:exon
so has part: feature:660157-660255:1:exon
so has part: feature:660476-660547:1:exon
so has part: feature:661012-661134:1:exon

XP_040391204.1
type: Protein
SIO_000068: ncbiprotein

position:656993:1
position: 656993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661134:1
position: 661134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656993-657095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657201-657310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658094-658221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658514-658584:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659401-659503:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659580-659670:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:660157-660255:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:660476-660547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:661012-661134:1:exon

CAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(661937..670930)
location: region:661937-670930:-1
so has part: feature:661937-670930:-1:exon
subclass of: SO_0000010

121059009
type: Gene
SIO_000068: ncbigene

position:661937:-1
position: 661937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670930:-1
position: 670930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661937-670930:-1:exon

CAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAP1
product: cyclase associated actin cytoskeleton regulatory protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535263.1
SIO_010081: CAP1
subclass of: SO_0000673
so part of: CAP1
location: complement(join(661937..663348,663746..663889,664440..664522,664625..664748,664956..665143,665836..666014,666122..666227,666773..666858,666966..667109,668610..668687,669330..669430,669679..669790,670326..670930))
location: region:661937-670930:-1
so has part: feature:670326-670930:-1:exon
so has part: feature:669679-669790:-1:exon
so has part: feature:669330-669430:-1:exon
so has part: feature:668610-668687:-1:exon
so has part: feature:666966-667109:-1:exon
so has part: feature:666773-666858:-1:exon
so has part: feature:666122-666227:-1:exon
so has part: feature:665836-666014:-1:exon
so has part: feature:664956-665143:-1:exon
so has part: feature:664625-664748:-1:exon
so has part: feature:664440-664522:-1:exon
so has part: feature:663746-663889:-1:exon
so has part: feature:661937-663348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670326-670930:-1:exon

position:670326:-1
position: 670326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669679-669790:-1:exon

position:669679:-1
position: 669679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669790:-1
position: 669790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:669330-669430:-1:exon

position:669330:-1
position: 669330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669430:-1
position: 669430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:668610-668687:-1:exon

position:668610:-1
position: 668610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668687:-1
position: 668687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666966-667109:-1:exon

position:666966:-1
position: 666966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667109:-1
position: 667109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:666773-666858:-1:exon

position:666773:-1
position: 666773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666858:-1
position: 666858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:666122-666227:-1:exon

position:666122:-1
position: 666122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666227:-1
position: 666227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:665836-666014:-1:exon

position:665836:-1
position: 665836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666014:-1
position: 666014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:664956-665143:-1:exon

position:664956:-1
position: 664956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665143:-1
position: 665143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:664625-664748:-1:exon

position:664625:-1
position: 664625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664748:-1
position: 664748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:664440-664522:-1:exon

position:664440:-1
position: 664440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664522:-1
position: 664522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:663746-663889:-1:exon

position:663746:-1
position: 663746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663889:-1
position: 663889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:661937-663348:-1:exon

position:663348:-1
position: 663348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: adenylyl cyclase-associated protein 1
translation: MTRAEAAFRGGSDPKAGGGESERGASLQGQPVAVVDGADMERLVERLEKAVERLETVCQGPGMCGDGSSKGVAQYVQAFDALLAGPVAEYVKISKEVGGDVQKHAEMVHAGLMSERSVLVMASQHQQPAENVFSALLKPISEQIQVVQNFREKNRGSKLFNHLSAVSESIPALGWVAMAPKPGPYVKEMTDAAMFYTNRILKEYKDVDKKQVDWVKAYLSIWTELQAYIKEYHTTGLTWSKTGPVATEGAKAPSAPAAGAAPPPPRPPPPPAPAPTGSSTDDSASRSALFAQINRGEGITSGLRHVSDDMKTHKNPALKNQGGPIRSGPKPFTAPKPACSANPSQKTSPKQPAILELEGKKWRVENQENAANLVISDTELKQVAYVFKCTNSTLQIKGKINSITLDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFTEFPVPEQFKTVWNGQKLVTTVTEIAG
SIO_010081: CAP1
subclass of: SO_0000673
so part of: CAP1
location: complement(join(663265..663348,663746..663889,664440..664522,664625..664748,664956..665143,665836..666014,666122..666227,666773..666858,666966..667109,668610..668687,669330..669430,669679..669790,670326..670424))
location: region:663265-670424:-1
so has part: feature:670326-670424:-1:exon
so has part: feature:669679-669790:-1:exon
so has part: feature:669330-669430:-1:exon
so has part: feature:668610-668687:-1:exon
so has part: feature:666966-667109:-1:exon
so has part: feature:666773-666858:-1:exon
so has part: feature:666122-666227:-1:exon
so has part: feature:665836-666014:-1:exon
so has part: feature:664956-665143:-1:exon
so has part: feature:664625-664748:-1:exon
so has part: feature:664440-664522:-1:exon
so has part: feature:663746-663889:-1:exon
so has part: feature:663265-663348:-1:exon

XP_040391197.1
type: Protein
SIO_000068: ncbiprotein

position:663265:-1
position: 663265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670424:-1
position: 670424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670326-670424:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669679-669790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669330-669430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:668610-668687:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666966-667109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:666773-666858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666122-666227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665836-666014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664956-665143:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664625-664748:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:664440-664522:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:663746-663889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:663265-663348:-1:exon

MFSD2A
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MFSD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(675503..684158)
location: region:675503-684158:-1
so has part: feature:675503-684158:-1:exon
subclass of: SO_0000010

121059008
type: Gene
SIO_000068: ncbigene

position:675503:-1
position: 675503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684158:-1
position: 684158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675503-684158:-1:exon

MFSD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MFSD2A
product: major facilitator superfamily domain containing 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535262.1
SIO_010081: MFSD2A
subclass of: SO_0000673
so part of: MFSD2A
location: complement(join(675503..675922,676183..676359,676537..676680,676848..676960,677215..677298,678038..678121,678251..678373,678962..679052,679153..679325,679820..679898,680018..680141,683284..683408,683806..683928,684069..684158))
location: region:675503-684158:-1
so has part: feature:684069-684158:-1:exon
so has part: feature:683806-683928:-1:exon
so has part: feature:683284-683408:-1:exon
so has part: feature:680018-680141:-1:exon
so has part: feature:679820-679898:-1:exon
so has part: feature:679153-679325:-1:exon
so has part: feature:678962-679052:-1:exon
so has part: feature:678251-678373:-1:exon
so has part: feature:678038-678121:-1:exon
so has part: feature:677215-677298:-1:exon
so has part: feature:676848-676960:-1:exon
so has part: feature:676537-676680:-1:exon
so has part: feature:676183-676359:-1:exon
so has part: feature:675503-675922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684069-684158:-1:exon

position:684069:-1
position: 684069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683806-683928:-1:exon

position:683806:-1
position: 683806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683928:-1
position: 683928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:683284-683408:-1:exon

position:683284:-1
position: 683284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683408:-1
position: 683408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:680018-680141:-1:exon

position:680018:-1
position: 680018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680141:-1
position: 680141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:679820-679898:-1:exon

position:679820:-1
position: 679820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679898:-1
position: 679898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:679153-679325:-1:exon

position:679153:-1
position: 679153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679325:-1
position: 679325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:678962-679052:-1:exon

position:678962:-1
position: 678962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679052:-1
position: 679052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:678251-678373:-1:exon

position:678251:-1
position: 678251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678373:-1
position: 678373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:678038-678121:-1:exon

position:678038:-1
position: 678038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678121:-1
position: 678121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:677215-677298:-1:exon

position:677215:-1
position: 677215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677298:-1
position: 677298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:676848-676960:-1:exon

position:676848:-1
position: 676848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676960:-1
position: 676960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:676537-676680:-1:exon

position:676537:-1
position: 676537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676680:-1
position: 676680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:676183-676359:-1:exon

position:676183:-1
position: 676183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676359:-1
position: 676359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:675503-675922:-1:exon

position:675922:-1
position: 675922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MFSD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MFSD2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium-dependent lysophosphatidylcholine symporter 1
translation: MAGGGGAERAGIAVAAAGLLPPARRQPRRREGRERLSVCSKLCYAVGGAPYQTTGCALGFFLQIYLLDVAQLDPFYASIILFVGRAWDAITDPLVGFFISKTPWTRFGRLMPWIIFSTPFAVISYFLIWFVPNISRGQVMWYLVFYCLFQTLVTCFHVPYSALTMFISREQSERDSATAYRMTVEVLGTVLGTAIQGQIVGKVVTPCIQSPLFVSESNASASMGDVNMTHYTGSLMDMRNAYMVAAGVIGALYILCAVILSVGVREKRESSELQSDEPVSFFRGLKLVMNHGAYIKLITGFLFTSLAFMLLEGNFALFCTYTLGFRNEFQNILLAIMLSATLTIPFWQWFLTRFGKKTAVYVGISSAIPFLIVVVVLDSNLVVTYIVAVAAGISVAATFLLPWSMLPDVIDDFKLQHPDSRGHEAIFFSFYVFFTKFTSGVSLGISTLSLDFAGYQTRGCSQPNEVNFTLKMLVSAVPVGLILLGLLLFKLYPIDEEKRRENKKALQDLREESNSSSESDNTELASIV
SIO_010081: MFSD2A
subclass of: SO_0000673
so part of: MFSD2A
location: complement(join(675865..675922,676183..676359,676537..676680,676848..676960,677215..677298,678038..678121,678251..678373,678962..679052,679153..679325,679820..679898,680018..680141,683284..683408,683806..683928,684069..684158))
location: region:675865-684158:-1
so has part: feature:684069-684158:-1:exon
so has part: feature:683806-683928:-1:exon
so has part: feature:683284-683408:-1:exon
so has part: feature:680018-680141:-1:exon
so has part: feature:679820-679898:-1:exon
so has part: feature:679153-679325:-1:exon
so has part: feature:678962-679052:-1:exon
so has part: feature:678251-678373:-1:exon
so has part: feature:678038-678121:-1:exon
so has part: feature:677215-677298:-1:exon
so has part: feature:676848-676960:-1:exon
so has part: feature:676537-676680:-1:exon
so has part: feature:676183-676359:-1:exon
so has part: feature:675865-675922:-1:exon

XP_040391196.1
type: Protein
SIO_000068: ncbiprotein

position:675865:-1
position: 675865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684069-684158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683806-683928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683284-683408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:680018-680141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679820-679898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679153-679325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:678962-679052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678251-678373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678038-678121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:677215-677298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:676848-676960:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:676537-676680:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:676183-676359:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:675865-675922:-1:exon

MYCL
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MYCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 689213..692923
location: region:689213-692923:1
so has part: feature:689213-692923:1:exon
subclass of: SO_0000010

121059024
type: Gene
SIO_000068: ncbigene

position:689213:1
position: 689213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692923:1
position: 692923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689213-692923:1:exon

MYCL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MYCL
product: MYCL proto-oncogene, bHLH transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535309.1
SIO_010081: MYCL
subclass of: SO_0000673
so part of: MYCL
location: join(689213..689359,689390..689918,691324..692923)
location: region:689213-692923:1
so has part: feature:689213-689359:1:exon
so has part: feature:689390-689918:1:exon
so has part: feature:691324-692923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689213-689359:1:exon

position:689359:1
position: 689359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:689390-689918:1:exon

position:689390:1
position: 689390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689918:1
position: 689918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:691324-692923:1:exon

position:691324:1
position: 691324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYCL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MYCL
product: MYCL proto-oncogene, bHLH transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535310.1
SIO_010081: MYCL
subclass of: SO_0000673
so part of: MYCL
location: join(689244..689918,691324..692923)
location: region:689244-692923:1
so has part: feature:689244-689918:1:exon
so has part: feature:691324-692923:1:exon

position:689244:1
position: 689244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689244-689918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691324-692923:1:exon

MYCL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MYCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein L-Myc
translation: MERDSSPHYFYDHDAGEDFHRSTAPSEDIWKKFELVPTPPRSPLGAPGDKGGGGGAEERPGGPARHGPAAEEPEYVLGPGPIFGNLSAFILRDCMWSGFSARERLEKAMTEKLAPGPQRAAPHKPSFAQDLGFSSSASECVDPAAVFLCPLAESKVPASSGSEGQSDSEGEEIDVVTVEKRQSLSLRQPVTITLRADPLDPCMKRFHISIHQQQHNYAARSPPDACPQPEPPGRDEEELLSTTESTPASTLPEPGLLKAGTSPGSDSEDVAKRKNHNYLERKRRNDLRSRFLALRDQVPGLASCPKTPKVVILSKSSEYLQSLISAERRMAAEKRQLRLQQSQLLRRIAHLKGH
SIO_010081: MYCL
subclass of: SO_0000673
so part of: MYCL
location: join(689414..689918,691324..691883)
location: region:689414-691883:1
so has part: feature:689414-689918:1:exon
so has part: feature:691324-691883:1:exon

XP_040391243.1
type: Protein
SIO_000068: ncbiprotein

position:689414:1
position: 689414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691883:1
position: 691883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689414-689918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691324-691883:1:exon

MYCL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MYCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein L-Myc
translation: MERDSSPHYFYDHDAGEDFHRSTAPSEDIWKKFELVPTPPRSPLGAPGDKGGGGGAEERPGGPARHGPAAEEPEYVLGPGPIFGNLSAFILRDCMWSGFSARERLEKAMTEKLAPGPQRAAPHKPSFAQDLGFSSSASECVDPAAVFLCPLAESKVPASSGSEGQSDSEGEEIDVVTVEKRQSLSLRQPVTITLRADPLDPCMKRFHISIHQQQHNYAARSPPDACPQPEPPGRDEEELLSTTESTPASTLPEPGLLKAGTSPGSDSEDVAKRKNHNYLERKRRNDLRSRFLALRDQVPGLASCPKTPKVVILSKSSEYLQSLISAERRMAAEKRQLRLQQSQLLRRIAHLKGH
SIO_010081: MYCL
subclass of: SO_0000673
so part of: MYCL
location: join(689414..689918,691324..691883)
location: region:689414-691883:1
so has part: feature:689414-689918:1:exon
so has part: feature:691324-691883:1:exon

XP_040391244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:689414-689918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691324-691883:1:exon

TRIT1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 694941..708131
location: region:694941-708131:1
so has part: feature:694941-708131:1:exon
subclass of: SO_0000010

121059021
type: Gene
SIO_000068: ncbigene

position:694941:1
position: 694941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708131:1
position: 708131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694941-708131:1:exon

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TRIT1
product: tRNA isopentenyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040535296.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: join(694941..695163,699203..699343,699794..699892,700144..700292,701121..701263,701522..701633,701916..702028,703098..703175,704586..704695,705033..705150,707541..708131)
location: region:694941-708131:1
so has part: feature:694941-695163:1:exon
so has part: feature:699203-699343:1:exon
so has part: feature:699794-699892:1:exon
so has part: feature:700144-700292:1:exon
so has part: feature:701121-701263:1:exon
so has part: feature:701522-701633:1:exon
so has part: feature:701916-702028:1:exon
so has part: feature:703098-703175:1:exon
so has part: feature:704586-704695:1:exon
so has part: feature:705033-705150:1:exon
so has part: feature:707541-708131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694941-695163:1:exon

position:695163:1
position: 695163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:699203-699343:1:exon

position:699203:1
position: 699203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699343:1
position: 699343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:699794-699892:1:exon

position:699794:1
position: 699794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699892:1
position: 699892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700144-700292:1:exon

position:700144:1
position: 700144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700292:1
position: 700292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:701121-701263:1:exon

position:701121:1
position: 701121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701263:1
position: 701263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:701522-701633:1:exon

position:701522:1
position: 701522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701633:1
position: 701633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:701916-702028:1:exon

position:701916:1
position: 701916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702028:1
position: 702028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:703098-703175:1:exon

position:703098:1
position: 703098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703175:1
position: 703175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:704586-704695:1:exon

position:704586:1
position: 704586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704695:1
position: 704695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:705033-705150:1:exon

position:705033:1
position: 705033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705150:1
position: 705150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:707541-708131:1:exon

position:707541:1
position: 707541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TRIT1
product: tRNA isopentenyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535299.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: join(694952..695163,699203..699343,699794..699892,700144..700292,701121..701263,701522..701633,701916..702028,703098..703175,704586..704695,705033..705150,705304..707531)
location: region:694952-707531:1
so has part: feature:694952-695163:1:exon
so has part: feature:699203-699343:1:exon
so has part: feature:699794-699892:1:exon
so has part: feature:700144-700292:1:exon
so has part: feature:701121-701263:1:exon
so has part: feature:701522-701633:1:exon
so has part: feature:701916-702028:1:exon
so has part: feature:703098-703175:1:exon
so has part: feature:704586-704695:1:exon
so has part: feature:705033-705150:1:exon
so has part: feature:705304-707531:1:exon

position:694952:1
position: 694952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707531:1
position: 707531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694952-695163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:699203-699343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699794-699892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700144-700292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701121-701263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:701522-701633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:701916-702028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703098-703175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704586-704695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:705033-705150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705304-707531:1:exon

position:705304:1
position: 705304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TRIT1
product: tRNA isopentenyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040535297.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: join(694953..695163,699203..699343,699794..699892,700144..700292,701121..701191,701522..701633,701916..702028,703098..703175,704586..704695,705033..705150,707541..708131)
location: region:694953-708131:1
so has part: feature:694953-695163:1:exon
so has part: feature:699203-699343:1:exon
so has part: feature:699794-699892:1:exon
so has part: feature:700144-700292:1:exon
so has part: feature:701121-701191:1:exon
so has part: feature:701522-701633:1:exon
so has part: feature:701916-702028:1:exon
so has part: feature:703098-703175:1:exon
so has part: feature:704586-704695:1:exon
so has part: feature:705033-705150:1:exon
so has part: feature:707541-708131:1:exon

position:694953:1
position: 694953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694953-695163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:699203-699343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699794-699892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700144-700292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701121-701191:1:exon

position:701191:1
position: 701191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:701522-701633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:701916-702028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703098-703175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704586-704695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:705033-705150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707541-708131:1:exon

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X1
translation: MAAAGPGRAMAAAAAALCLGRAPPPPPRPLVVILGATGTGKSALAVQLGLRLGGEIVSADSMQVYKGLDIITNKVSPQEQRLCRHHMISFVDPLVSNYTVVDFRDKAVALIEDIFARDKIPIVVGGTNYYIESLLWKVLVSTKEKASPAPSPAPDRKVELEQLDGVELHRRLTQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPNSCILWLHADQAALDRRLEQRVDDMLAAGLLEELRDFHRRYNRQKVAENRQDYQHGIFQSIGFKEFHEYLVSEGSCSPETSALLLQRGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDQLRWEEDVLKPALEIVESFIQGREPPAEPVKMEFDANENKRRHRVCELCDRVIIGDREWAAHTRSKSHLHHLKKNRKLEAASRAAGGDAGGAETSGEDRSVPVPQACGAAGAAEQPHFHRDSEEAPGPGWARPERAETLLGDEAGV
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: join(694975..695163,699203..699343,699794..699892,700144..700292,701121..701263,701522..701633,701916..702028,703098..703175,704586..704695,705033..705150,707541..707800)
location: region:694975-707800:1
so has part: feature:694975-695163:1:exon
so has part: feature:699203-699343:1:exon
so has part: feature:699794-699892:1:exon
so has part: feature:700144-700292:1:exon
so has part: feature:701121-701263:1:exon
so has part: feature:701522-701633:1:exon
so has part: feature:701916-702028:1:exon
so has part: feature:703098-703175:1:exon
so has part: feature:704586-704695:1:exon
so has part: feature:705033-705150:1:exon
so has part: feature:707541-707800:1:exon

XP_040391230.1
type: Protein
SIO_000068: ncbiprotein

position:694975:1
position: 694975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707800:1
position: 707800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694975-695163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:699203-699343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699794-699892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700144-700292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701121-701263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:701522-701633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:701916-702028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703098-703175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704586-704695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:705033-705150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707541-707800:1:exon

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X2
translation: MAAAGPGRAMAAAAAALCLGRAPPPPPRPLVVILGATGTGKSALAVQLGLRLGGEIVSADSMQVYKGLDIITNKVSPQEQRLCRHHMISFVDPLVSNYTVVDFRDKAVALIEDIFARDKIPIVVGGTNYYIESLLWKVLVSTKEKASPAPSPAPDRKVELEQLDGVELHRRLTQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEALDRRLEQRVDDMLAAGLLEELRDFHRRYNRQKVAENRQDYQHGIFQSIGFKEFHEYLVSEGSCSPETSALLLQRGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDQLRWEEDVLKPALEIVESFIQGREPPAEPVKMEFDANENKRRHRVCELCDRVIIGDREWAAHTRSKSHLHHLKKNRKLEAASRAAGGDAGGAETSGEDRSVPVPQACGAAGAAEQPHFHRDSEEAPGPGWARPERAETLLGDEAGV
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: join(694975..695163,699203..699343,699794..699892,700144..700292,701121..701191,701522..701633,701916..702028,703098..703175,704586..704695,705033..705150,707541..707800)
location: region:694975-707800:1
so has part: feature:694975-695163:1:exon
so has part: feature:699203-699343:1:exon
so has part: feature:699794-699892:1:exon
so has part: feature:700144-700292:1:exon
so has part: feature:701121-701191:1:exon
so has part: feature:701522-701633:1:exon
so has part: feature:701916-702028:1:exon
so has part: feature:703098-703175:1:exon
so has part: feature:704586-704695:1:exon
so has part: feature:705033-705150:1:exon
so has part: feature:707541-707800:1:exon

XP_040391231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694975-695163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:699203-699343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699794-699892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700144-700292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701121-701191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:701522-701633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:701916-702028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703098-703175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704586-704695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:705033-705150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707541-707800:1:exon

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X3
translation: MAAAGPGRAMAAAAAALCLGRAPPPPPRPLVVILGATGTGKSALAVQLGLRLGGEIVSADSMQVYKGLDIITNKVSPQEQRLCRHHMISFVDPLVSNYTVVDFRDKAVALIEDIFARDKIPIVVGGTNYYIESLLWKVLVSTKEKASPAPSPAPDRKVELEQLDGVELHRRLTQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPNSCILWLHADQAALDRRLEQRVDDMLAAGLLEELRDFHRRYNRQKVAENRQDYQHGIFQSIGFKEFHEYLVSEGSCSPETSALLLQRGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDQLRWEEDVLKPALEIVESFIQGREPPAEPVKMEFDANENKRRHRVCELCDRVIIGDREWAGLFTARL
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: join(694975..695163,699203..699343,699794..699892,700144..700292,701121..701263,701522..701633,701916..702028,703098..703175,704586..704695,705033..705150,705304..705326)
location: region:694975-705326:1
so has part: feature:694975-695163:1:exon
so has part: feature:699203-699343:1:exon
so has part: feature:699794-699892:1:exon
so has part: feature:700144-700292:1:exon
so has part: feature:701121-701263:1:exon
so has part: feature:701522-701633:1:exon
so has part: feature:701916-702028:1:exon
so has part: feature:703098-703175:1:exon
so has part: feature:704586-704695:1:exon
so has part: feature:705033-705150:1:exon
so has part: feature:705304-705326:1:exon

XP_040391233.1
type: Protein
SIO_000068: ncbiprotein

position:705326:1
position: 705326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694975-695163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:699203-699343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699794-699892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700144-700292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701121-701263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:701522-701633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:701916-702028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703098-703175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704586-704695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:705033-705150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705304-705326:1:exon

LOC121059022
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121059022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(711639..718803)
location: region:711639-718803:-1
so has part: feature:711639-718803:-1:exon
subclass of: SO_0000010

121059022
type: Gene
SIO_000068: ncbigene

position:711639:-1
position: 711639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718803:-1
position: 718803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711639-718803:-1:exon

LOC121059022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059022
product: CYFIP-related Rac1 interactor A-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040535306.1
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711639..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,715496..715576,716062..716140,718750..718803))
location: region:711639-718803:-1
so has part: feature:718750-718803:-1:exon
so has part: feature:716062-716140:-1:exon
so has part: feature:715496-715576:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711639-711822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718750-718803:-1:exon

position:718750:-1
position: 718750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:716062-716140:-1:exon

position:716062:-1
position: 716062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716140:-1
position: 716140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:715496-715576:-1:exon

position:715496:-1
position: 715496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715576:-1
position: 715576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:713649-713770:-1:exon

position:713649:-1
position: 713649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713770:-1
position: 713770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:713477-713582:-1:exon

position:713477:-1
position: 713477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713582:-1
position: 713582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:713170-713306:-1:exon

position:713170:-1
position: 713170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713306:-1
position: 713306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:712887-712964:-1:exon

position:712887:-1
position: 712887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712964:-1
position: 712964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:712649-712765:-1:exon

position:712649:-1
position: 712649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712765:-1
position: 712765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:712402-712481:-1:exon

position:712402:-1
position: 712402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712481:-1
position: 712481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:712188-712314:-1:exon

position:712188:-1
position: 712188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712314:-1
position: 712314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:711929-711999:-1:exon

position:711929:-1
position: 711929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711999:-1
position: 711999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:711639-711822:-1:exon

position:711822:-1
position: 711822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121059022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059022
product: CYFIP-related Rac1 interactor A-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040535304.1
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711639..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714240,716062..716129))
location: region:711639-716129:-1
so has part: feature:716062-716129:-1:exon
so has part: feature:714161-714240:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711639-711822:-1:exon

position:716129:-1
position: 716129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716062-716129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714161-714240:-1:exon

position:714161:-1
position: 714161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714240:-1
position: 714240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:711639-711822:-1:exon

LOC121059022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059022
product: CYFIP-related Rac1 interactor A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535302.1
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711639..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714240,715496..715576,716062..716119))
location: region:711639-716119:-1
so has part: feature:716062-716119:-1:exon
so has part: feature:715496-715576:-1:exon
so has part: feature:714161-714240:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711639-711822:-1:exon

position:716119:-1
position: 716119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716062-716119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715496-715576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714161-714240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:711639-711822:-1:exon

LOC121059022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059022
product: CYFIP-related Rac1 interactor A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040535300.1
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711639..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,715496..715576,715669..715945))
location: region:711639-715945:-1
so has part: feature:715669-715945:-1:exon
so has part: feature:715496-715576:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711639-711822:-1:exon

position:715945:-1
position: 715945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715669-715945:-1:exon

position:715669:-1
position: 715669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:715496-715576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:711639-711822:-1:exon

LOC121059022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059022
product: CYFIP-related Rac1 interactor A-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040535305.1
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711639..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714240,715669..715795))
location: region:711639-715795:-1
so has part: feature:715669-715795:-1:exon
so has part: feature:714161-714240:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711639-711822:-1:exon

position:715795:-1
position: 715795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715669-715795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714161-714240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:711639-711822:-1:exon

LOC121059022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059022
product: CYFIP-related Rac1 interactor A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535303.1
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711639..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714240,715496..715614))
location: region:711639-715614:-1
so has part: feature:715496-715614:-1:exon
so has part: feature:714161-714240:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711639-711822:-1:exon

position:715614:-1
position: 715614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715496-715614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714161-714240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:711639-711822:-1:exon

LOC121059022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121059022
product: CYFIP-related Rac1 interactor A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040535301.1
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711639..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..715482))
location: region:711639-715482:-1
so has part: feature:714161-715482:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711639-711822:-1:exon

position:715482:-1
position: 715482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714161-715482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711639-711822:-1:exon

LOC121059022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CYFIP-related Rac1 interactor A-like isoform X1
translation: MGSPAGWPGEAAWSRRAGGRAPRRGRRGERHPQEARRSRACAPLPSPPREIENTEVPGQRPRFRTHGLAAGRVQQGPGGAGPGGAGAGLLAMGNLIKVLGKDLENCPHFFLDFENAQPTEAETAVWNQVNAVLEEAQGVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQVRALLQ
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711759..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,715496..715576,715669..715930))
location: region:711759-715930:-1
so has part: feature:715669-715930:-1:exon
so has part: feature:715496-715576:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711759-711822:-1:exon

XP_040391234.1
type: Protein
SIO_000068: ncbiprotein

position:711759:-1
position: 711759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715930:-1
position: 715930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715669-715930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715496-715576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:711759-711822:-1:exon

LOC121059022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CYFIP-related Rac1 interactor A-like isoform X4
translation: MGNLIKVLGKDLENCPHFFLDFENAQPTEAETAVWNQVNAVLEEAQGVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQVRALLQ
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711759..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,715496..715565))
location: region:711759-715565:-1
so has part: feature:715496-715565:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711759-711822:-1:exon

XP_040391240.1
type: Protein
SIO_000068: ncbiprotein

position:715565:-1
position: 715565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715496-715565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711759-711822:-1:exon

LOC121059022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CYFIP-related Rac1 interactor A-like isoform X2
translation: MGRTGLSPPLPTAQHLFPEHHLTITLFSSCFFSCRFHMGNLLKVLTYNELDQGPNFFLDFENAQPTEAETAVWNQVNAVLEEAQGVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQVRALLQ
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711759..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714344))
location: region:711759-714344:-1
so has part: feature:714161-714344:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711759-711822:-1:exon

XP_040391235.1
type: Protein
SIO_000068: ncbiprotein

position:714344:-1
position: 714344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714161-714344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711759-711822:-1:exon

LOC121059022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CYFIP-related Rac1 interactor A-like isoform X3
translation: MGNLLKVLTYNELDQGPNFFLDFENAQPTEAETAVWNQVNAVLEEAQGVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQVRALLQ
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711759..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714233))
location: region:711759-714233:-1
so has part: feature:714161-714233:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711759-711822:-1:exon

XP_040391236.1
type: Protein
SIO_000068: ncbiprotein

position:714233:-1
position: 714233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714161-714233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711759-711822:-1:exon

LOC121059022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CYFIP-related Rac1 interactor A-like isoform X3
translation: MGNLLKVLTYNELDQGPNFFLDFENAQPTEAETAVWNQVNAVLEEAQGVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQVRALLQ
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711759..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714233))
location: region:711759-714233:-1
so has part: feature:714161-714233:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711759-711822:-1:exon

XP_040391237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:714161-714233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711759-711822:-1:exon

LOC121059022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CYFIP-related Rac1 interactor A-like isoform X3
translation: MGNLLKVLTYNELDQGPNFFLDFENAQPTEAETAVWNQVNAVLEEAQGVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQVRALLQ
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711759..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714233))
location: region:711759-714233:-1
so has part: feature:714161-714233:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711759-711822:-1:exon

XP_040391238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:714161-714233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711759-711822:-1:exon

LOC121059022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121059022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CYFIP-related Rac1 interactor A-like isoform X3
translation: MGNLLKVLTYNELDQGPNFFLDFENAQPTEAETAVWNQVNAVLEEAQGVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQVRALLQ
SIO_010081: LOC121059022
subclass of: SO_0000673
so part of: LOC121059022
location: complement(join(711759..711822,711929..711999,712188..712314,712402..712481,712649..712765,712887..712964,713170..713306,713477..713582,713649..713770,714161..714233))
location: region:711759-714233:-1
so has part: feature:714161-714233:-1:exon
so has part: feature:713649-713770:-1:exon
so has part: feature:713477-713582:-1:exon
so has part: feature:713170-713306:-1:exon
so has part: feature:712887-712964:-1:exon
so has part: feature:712649-712765:-1:exon
so has part: feature:712402-712481:-1:exon
so has part: feature:712188-712314:-1:exon
so has part: feature:711929-711999:-1:exon
so has part: feature:711759-711822:-1:exon

XP_040391239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:714161-714233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713649-713770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713477-713582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713170-713306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712887-712964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712649-712765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712402-712481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712188-712314:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711929-711999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711759-711822:-1:exon

HPCAL4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HPCAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 720632..724759
location: region:720632-724759:1
so has part: feature:720632-724759:1:exon
subclass of: SO_0000010

121059027
type: Gene
SIO_000068: ncbigene

position:720632:1
position: 720632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724759:1
position: 724759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720632-724759:1:exon

HPCAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HPCAL4
product: hippocalcin like 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040535314.1
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: join(720632..720746,722493..722662,722806..723021,723247..724759)
location: region:720632-724759:1
so has part: feature:720632-720746:1:exon
so has part: feature:722493-722662:1:exon
so has part: feature:722806-723021:1:exon
so has part: feature:723247-724759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:720632-720746:1:exon

position:720746:1
position: 720746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722493-722662:1:exon

position:722493:1
position: 722493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722662:1
position: 722662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:722806-723021:1:exon

position:722806:1
position: 722806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723021:1
position: 723021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:723247-724759:1:exon

position:723247:1
position: 723247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HPCAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HPCAL4
product: hippocalcin like 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535313.1
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: join(720638..720746,722393..722662,722806..723021,723247..724759)
location: region:720638-724759:1
so has part: feature:720638-720746:1:exon
so has part: feature:722393-722662:1:exon
so has part: feature:722806-723021:1:exon
so has part: feature:723247-724759:1:exon

position:720638:1
position: 720638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720638-720746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722393-722662:1:exon

position:722393:1
position: 722393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:722806-723021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723247-724759:1:exon

HPCAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HPCAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hippocalcin-like protein 4
translation: MGKHSSKLAPEMLDDLVRSTEFSEQELKQWYKGFLKDCPTGILNLEEFQQLYIKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGTFEQKLNWAFEMYDLDGDGMITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFTKMDKDKDDQISLEEFKEAAKSDPSIVLLLQCDMQK
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: join(722501..722662,722806..723021,723247..723444)
location: region:722501-723444:1
so has part: feature:722501-722662:1:exon
so has part: feature:722806-723021:1:exon
so has part: feature:723247-723444:1:exon

XP_040391247.1
type: Protein
SIO_000068: ncbiprotein

position:722501:1
position: 722501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723444:1
position: 723444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722501-722662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722806-723021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723247-723444:1:exon

HPCAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HPCAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hippocalcin-like protein 4
translation: MGKHSSKLAPEMLDDLVRSTEFSEQELKQWYKGFLKDCPTGILNLEEFQQLYIKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGTFEQKLNWAFEMYDLDGDGMITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFTKMDKDKDDQISLEEFKEAAKSDPSIVLLLQCDMQK
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: join(722501..722662,722806..723021,723247..723444)
location: region:722501-723444:1
so has part: feature:722501-722662:1:exon
so has part: feature:722806-723021:1:exon
so has part: feature:723247-723444:1:exon

XP_040391248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:722501-722662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722806-723021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723247-723444:1:exon

NT5C1A
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NT5C1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 725750..737117
location: region:725750-737117:1
so has part: feature:725750-737117:1:exon
subclass of: SO_0000010

121059023
type: Gene
SIO_000068: ncbigene

position:725750:1
position: 725750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737117:1
position: 737117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725750-737117:1:exon

NT5C1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NT5C1A
product: 5'-nucleotidase, cytosolic IA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040535307.1
SIO_010081: NT5C1A
subclass of: SO_0000673
so part of: NT5C1A
location: join(725750..725873,731740..731907,732683..732812,733024..733146,733593..733777,734083..737117)
location: region:725750-737117:1
so has part: feature:725750-725873:1:exon
so has part: feature:731740-731907:1:exon
so has part: feature:732683-732812:1:exon
so has part: feature:733024-733146:1:exon
so has part: feature:733593-733777:1:exon
so has part: feature:734083-737117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725750-725873:1:exon

position:725873:1
position: 725873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731740-731907:1:exon

position:731740:1
position: 731740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731907:1
position: 731907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:732683-732812:1:exon

position:732683:1
position: 732683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732812:1
position: 732812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:733024-733146:1:exon

position:733024:1
position: 733024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733146:1
position: 733146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:733593-733777:1:exon