Cygnus olor isolate bCygOlo1 chromosome 21, bCygOlo1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Cygnus olor isolate bCygOlo1 chromosome 21, bCygOlo1.pri.v2, whole genome shotgun sequence.
sequence version: NC_049189.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_049189.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA642912
dblink: SAMN12621369
keyword: WGS
keyword: RefSeq
source: Cygnus olor (mute swan)
organism: Cygnus olor
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020085.2.\nAssembly name: bCygOlo1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/31. The original whole-genome shotgun project has the\naccession WNMI00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v. 1.0.3+\n 1.Nov.2018; scaff10x v. 4.1.0; Bionano\n solve v. 3.2.1_04122018; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2020-11-30; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bCygOlo1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.23x\nSequencing Technology :: PacBio Sequel 1 CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cygnus olor Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 9108455
topology: linear
so has quality: SO_0000987
location: 1..9108455
location: region:1-9108455:1
RO_0002162: 8869

NC_049189
type: RefSeq
SIO_000068: refseq

PRJNA642912
type: BioProject
SIO_000068: bioproject

SAMN12621369
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9108455:1
position: 9108455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-9108455:1:source
so part of: sequence
organism: Cygnus olor
mol type: genomic DNA
isolate: bCygOlo1
chromosome: 21
sex: male
tissue type: muscle
dev stage: adult
country: Germany: Mainau
lat lon: 50.149850 N 11.063270 E
collection date: 2015-07-01
collected by: Robert Kraus

8869
type: Taxonomy
SIO_000068: taxonomy

MRPS16
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: MRPS16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 863..1790
location: region:863-1790:1
so has part: feature:863-1790:1:exon
subclass of: SO_0000010

121058321
type: Gene
SIO_000068: ncbigene

position:863:1
position: 863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1790:1
position: 1790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863-1790:1:exon

MRPS16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: MRPS16
product: mitochondrial ribosomal protein S16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533720.1
SIO_010081: MRPS16
subclass of: SO_0000673
so part of: MRPS16
location: join(863..1115,1184..1444,1530..1790)
location: region:863-1790:1
so has part: feature:863-1115:1:exon
so has part: feature:1184-1444:1:exon
so has part: feature:1530-1790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863-1115:1:exon

position:1115:1
position: 1115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1184-1444:1:exon

position:1184:1
position: 1184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444:1
position: 1444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1530-1790:1:exon

position:1530:1
position: 1530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPS16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: MRPS16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S16, mitochondrial
translation: MVQLGSRLLKGCRGGHVVIRFALGGCTNRPFFRIVAAHSRRARDGKYLEQLGCLDPLPNARGEKVAGLNLERLRHWLGCGAQLSRPAEKLLGLAGFLPLHPMTVTGAERLRRRRRAQEAAVPPVAGGLHQPGETP
SIO_010081: MRPS16
subclass of: SO_0000673
so part of: MRPS16
location: join(1103..1115,1184..1444,1530..1663)
location: region:1103-1663:1
so has part: feature:1103-1115:1:exon
so has part: feature:1184-1444:1:exon
so has part: feature:1530-1663:1:exon

XP_040389654.1
type: Protein
SIO_000068: ncbiprotein

position:1103:1
position: 1103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663:1
position: 1663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103-1115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1184-1444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530-1663:1:exon

SLC45A1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3612..75602)
location: region:3612-75602:-1
so has part: feature:3612-75602:-1:exon
subclass of: SO_0000010

121058315
type: Gene
SIO_000068: ncbigene

position:3612:-1
position: 3612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75602:-1
position: 75602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3612-75602:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040533702.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(3612..4179,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24293,30967..31077,33754..33947))
location: region:3612-33947:-1
so has part: feature:33754-33947:-1:exon
so has part: feature:30967-31077:-1:exon
so has part: feature:24158-24293:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:3612-4179:-1:exon

position:33947:-1
position: 33947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33754-33947:-1:exon

position:33754:-1
position: 33754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30967-31077:-1:exon

position:30967:-1
position: 30967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31077:-1
position: 31077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24158-24293:-1:exon

position:24158:-1
position: 24158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24293:-1
position: 24293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13917-14329:-1:exon

position:13917:-1
position: 13917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14329:-1
position: 14329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12805-12897:-1:exon

position:12805:-1
position: 12805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12897:-1
position: 12897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12095-12319:-1:exon

position:12095:-1
position: 12095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12319:-1
position: 12319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10528-11267:-1:exon

position:10528:-1
position: 10528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11267:-1
position: 11267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9262-9415:-1:exon

position:9262:-1
position: 9262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9415:-1
position: 9415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8201-8377:-1:exon

position:8201:-1
position: 8201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8377:-1
position: 8377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3612-4179:-1:exon

position:4179:-1
position: 4179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040533698.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(3612..4179,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24293,30967..31077,33754..33945))
location: region:3612-33945:-1
so has part: feature:33754-33945:-1:exon
so has part: feature:30967-31077:-1:exon
so has part: feature:24158-24293:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:3612-4179:-1:exon

position:33945:-1
position: 33945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33754-33945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30967-31077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24158-24293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7355-7560:-1:exon

position:7355:-1
position: 7355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7560:-1
position: 7560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3612-4179:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X8
translation: MAGSSQESYEKQGIKLFSCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSEMTGRSLLNCELQCDVYLLESRHFKYSV
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(4094..4179,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24210))
location: region:4094-24210:-1
so has part: feature:24158-24210:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:4094-4179:-1:exon

XP_040389636.1
type: Protein
SIO_000068: ncbiprotein

position:4094:-1
position: 4094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24210:-1
position: 24210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4094-4179:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X4
translation: MAGSSQESYEKQGIKLFSCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEK
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(4174..4179,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24210))
location: region:4174-24210:-1
so has part: feature:24158-24210:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:4174-4179:-1:exon

XP_040389632.1
type: Protein
SIO_000068: ncbiprotein

position:4174:-1
position: 4174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4174-4179:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533697.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,75473..75602))
location: region:6990-75602:-1
so has part: feature:75473-75602:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:6990-7288:-1:exon

position:6990:-1
position: 6990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75473-75602:-1:exon

position:75473:-1
position: 75473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6990-7288:-1:exon

position:7288:-1
position: 7288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040533699.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,34429..34490,75473..75598))
location: region:6990-75598:-1
so has part: feature:75473-75598:-1:exon
so has part: feature:34429-34490:-1:exon
so has part: feature:13917-14329:-1:exon
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urn:…
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urn:…
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reference: sequence
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SIO_000300: 10
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SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040533693.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,33754..33927,34429..34490,75473..75552))
location: region:6990-75552:-1
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so has part: feature:13917-14329:-1:exon
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urn:…
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urn:…
SIO_000300: 2
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reference: sequence
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urn:…
SIO_000300: 4
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SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040533696.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,30967..31077,34429..34490,75473..75546))
location: region:6990-75546:-1
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urn:…
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SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040533689.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24293,30967..31077,34429..34490,75473..75546))
location: region:6990-75546:-1
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urn:…
SIO_000300: 1
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SIO_000300: 10
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SIO_000300: 11
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6990-7288:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040533690.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24293,30967..31077,33754..33927,34429..34490))
location: region:6990-34490:-1
so has part: feature:34429-34490:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 10
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SIO_000300: 11
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6990-7288:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533695.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,30967..31077,33754..33939))
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so has part: feature:33754-33939:-1:exon
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reference: sequence
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040533703.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,11080..11267,12095..12319,12805..12897,13917..14329,24158..24293,30967..31077,33754..33939))
location: region:6990-33939:-1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 8
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SIO_000628: feature:6990-7288:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040533700.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..10752,11080..11267,12095..12319,12805..12897,13917..14329,24158..24293,30967..31077,33754..33939))
location: region:6990-33939:-1
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SIO_000300: 1
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urn:…
SIO_000300: 9
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SIO_000300: 10
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SIO_000300: 12
SIO_000628: feature:6990-7288:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040533692.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..27131))
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reference: sequence
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 9
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SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533701.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..10752,11080..11267,12095..12319,12805..12897,13917..14329,18652..18757))
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SIO_000300: 2
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urn:…
SIO_000300: 9
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6990-7288:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533694.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,18652..18757))
location: region:6990-18757:-1
so has part: feature:18652-18757:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:6990-7288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18652-18757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6990-7288:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533704.1
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(6990..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13717..13832,13917..14007))
location: region:6990-14007:-1
so has part: feature:13917-14007:-1:exon
so has part: feature:13717-13832:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:6990-7288:-1:exon

position:14007:-1
position: 14007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13917-14007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13717-13832:-1:exon

position:13717:-1
position: 13717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13832:-1
position: 13832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6990-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X5
translation: MRQKQDFLAGCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,34429..34457))
location: region:7004-34457:-1
so has part: feature:34429-34457:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389633.1
type: Protein
SIO_000068: ncbiprotein

position:7004:-1
position: 7004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34457:-1
position: 34457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34429-34457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X2
translation: MILKIYRDRDCCISQSCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,33754..33800))
location: region:7004-33800:-1
so has part: feature:33754-33800:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389627.1
type: Protein
SIO_000068: ncbiprotein

position:33800:-1
position: 33800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33754-33800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X9
translation: MAGSSQESYEKQGIKLFSCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,11080..11267,12095..12319,12805..12897,13917..14329,24158..24210))
location: region:7004-24210:-1
so has part: feature:24158-24210:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:11080-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11080-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X6
translation: MAGSSQESYEKQGIKLFSCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..10752,11080..11267,12095..12319,12805..12897,13917..14329,24158..24210))
location: region:7004-24210:-1
so has part: feature:24158-24210:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:11080-11267:-1:exon
so has part: feature:10528-10752:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11080-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10528-10752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X1
translation: MAGSSQESYEKQGIKLFSCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24210))
location: region:7004-24210:-1
so has part: feature:24158-24210:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X1
translation: MAGSSQESYEKQGIKLFSCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24210))
location: region:7004-24210:-1
so has part: feature:24158-24210:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X1
translation: MAGSSQESYEKQGIKLFSCLLVMIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24210))
location: region:7004-24210:-1
so has part: feature:24158-24210:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24158-24210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X7
translation: MIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..10752,11080..11267,12095..12319,12805..12897,13917..14316))
location: region:7004-14316:-1
so has part: feature:13917-14316:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:11080-11267:-1:exon
so has part: feature:10528-10752:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389635.1
type: Protein
SIO_000068: ncbiprotein

position:14316:-1
position: 14316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13917-14316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11080-11267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10528-10752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X3
translation: MIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14316))
location: region:7004-14316:-1
so has part: feature:13917-14316:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13917-14316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X3
translation: MIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14316))
location: region:7004-14316:-1
so has part: feature:13917-14316:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13917-14316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X3
translation: MIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14316))
location: region:7004-14316:-1
so has part: feature:13917-14316:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13917-14316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X3
translation: MIPPSATTPVSDAALLPSVASQEIWRSQVPGYSGSVTQHISHRANNFKRHPKRRKYIRPSPPPPPNTPCPIDLIDFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLALGALLGLSLMLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14316))
location: region:7004-14316:-1
so has part: feature:13917-14316:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13917-14316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X10
translation: MLNGRDIGNALSDTVNNHKWGIILTVCGVVLMDFSADSADNPSHAYMMDVCGPMDQDRGLNIHALLAGLGGGFGYVVGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTMLTLLSIPERPLGSFSRKKKVMKSPSLPLPPSPPLFFEEAVNENFASHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDSSLTGINEFSSSFGTSNIDNVLIDCFTGGHNSYLALPASLPRHPVSVSFPQVPDGRYQEENGILEQGESSITMGPDSEALTVGSLDAIKPRSSGILKRPQTLAIPDIVTGRCPENSRRRNVTFSQQVANILLDGVKYESELNGSSETSEQPLSIRLLCSTICHMPKALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFQGNPKAPHNSDEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLSTLSRNIYVVLSLCATYGVLFATLCTLPYSLLCDYYQSCEFTGLKAEGMRRGMGVDISLLSCQYFLAQILVALAMGPLTAAVGSASGAMYFASLVSFLGCLFSSLCVSYEPIPPAEELPPTEEQRPLLPCAQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(7004..7288,7355..7560,8201..8377,9262..9415,10528..11267,12095..12296))
location: region:7004-12296:-1
so has part: feature:12095-12296:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8201-8377:-1:exon
so has part: feature:7355-7560:-1:exon
so has part: feature:7004-7288:-1:exon

XP_040389638.1
type: Protein
SIO_000068: ncbiprotein

position:12296:-1
position: 12296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12095-12296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8201-8377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7355-7560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7004-7288:-1:exon

SLC45A1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814165.1
SIO_010081: SLC45A1
so part of: SLC45A1
location: complement(join(7388..7560,8010..8377,9262..9415,10528..11267,12095..12319,12805..12897,13917..14329,24158..24293,30967..31077,33754..33943))
location: region:7388-33943:-1
so has part: feature:33754-33943:-1:exon
so has part: feature:30967-31077:-1:exon
so has part: feature:24158-24293:-1:exon
so has part: feature:13917-14329:-1:exon
so has part: feature:12805-12897:-1:exon
so has part: feature:12095-12319:-1:exon
so has part: feature:10528-11267:-1:exon
so has part: feature:9262-9415:-1:exon
so has part: feature:8010-8377:-1:exon
so has part: feature:7388-7560:-1:exon

position:7388:-1
position: 7388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33943:-1
position: 33943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33754-33943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30967-31077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24158-24293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13917-14329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12805-12897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12095-12319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10528-11267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9262-9415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8010-8377:-1:exon

position:8010:-1
position: 8010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7388-7560:-1:exon

LOC121058318
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14223..76552
location: region:14223-76552:1
so has part: feature:14223-76552:1:exon
subclass of: SO_0000010

121058318
type: Gene
SIO_000068: ncbigene

position:14223:1
position: 14223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76552:1
position: 76552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14223-76552:1:exon

LOC121058318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058318
product: translation initiation factor IF-2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533711.1
SIO_010081: LOC121058318
subclass of: SO_0000673
so part of: LOC121058318
location: join(14223..14329,75473..75614,75863..76552)
location: region:14223-76552:1
so has part: feature:14223-14329:1:exon
so has part: feature:75473-75614:1:exon
so has part: feature:75863-76552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14223-14329:1:exon

position:14329:1
position: 14329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75473-75614:1:exon

position:75473:1
position: 75473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75614:1
position: 75614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75863-76552:1:exon

position:75863:1
position: 75863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121058318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X4
translation: MVESSRVGNSGHGRITQDLSVCPASPSFGSSFRVGRRGASTRWRQTTKRAPLPGPAPRGLLRLQGKAARIARDGHRRALAKRACACPTKPQRPRCPGERAARRGCQSAPLPGPAGRGAATSRCRPLLPAAGAEQRRPQRHRARTPRCRRPRGAASAGSRRSSLRRPPPAEAPVRPRAPLASAQRQPEPAQRTRLPLRSGAARPEAWAAGGASATEAAKYRRRPRAGVPPAALSSTGLPGSCRGAPPSLLRPWRGRRPFKAFPDECAAGGGGRGEGGAPRRPRLPL
SIO_010081: LOC121058318
subclass of: SO_0000673
so part of: LOC121058318
location: join(14304..14329,75473..75614,75863..76552)
location: region:14304-76552:1
so has part: feature:14304-14329:1:exon
so has part: feature:75473-75614:1:exon
so has part: feature:75863-76552:1:exon

XP_040389645.1
type: Protein
SIO_000068: ncbiprotein

position:14304:1
position: 14304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14304-14329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75473-75614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75863-76552:1:exon

LOC121058318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058318
product: translation initiation factor IF-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533709.1
SIO_010081: LOC121058318
subclass of: SO_0000673
so part of: LOC121058318
location: join(67454..74572,75473..75614,75863..76552)
location: region:67454-76552:1
so has part: feature:67454-74572:1:exon
so has part: feature:75473-75614:1:exon
so has part: feature:75863-76552:1:exon

position:67454:1
position: 67454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67454-74572:1:exon

position:74572:1
position: 74572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75473-75614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75863-76552:1:exon

LOC121058318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058318
product: translation initiation factor IF-2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533710.1
SIO_010081: LOC121058318
subclass of: SO_0000673
so part of: LOC121058318
location: join(67454..74572,75473..75614,75876..76442)
location: region:67454-76442:1
so has part: feature:67454-74572:1:exon
so has part: feature:75473-75614:1:exon
so has part: feature:75876-76442:1:exon

position:76442:1
position: 76442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67454-74572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75473-75614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75876-76442:1:exon

position:75876:1
position: 75876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121058318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058318
product: translation initiation factor IF-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533708.1
SIO_010081: LOC121058318
subclass of: SO_0000673
so part of: LOC121058318
location: join(67476..74572,75473..76552)
location: region:67476-76552:1
so has part: feature:67476-74572:1:exon
so has part: feature:75473-76552:1:exon

position:67476:1
position: 67476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67476-74572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75473-76552:1:exon

LOC121058318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X2
translation: MGPGHNIAQFHPNTGVNLFFTKTKTSFVCSILFFGWLAPPFVFCFLSSAYTSHIEPALEDLFVISHISGHGRITQDLSVCPASPSFGSSFRVGRRGASTRWRQTTKRAPLPGPAPRGLLRLQGKAARIARDGHRRALAKRACACPTKPQRPRCPGERAARRGCQSAPLPGPAGRGAATSRCRPLLPAAGAEQRRPQRHRARTPRCRRPRGAASAGSRRSSLRRPPPAEAPVRPRAPLASAQRQPEPAQRTRLPLRSGAARPEAWAAGGASATEAAKYRRRPRAGVPPAALSSTGLPGSCRGAPPSLLRPWRGRRPFKAFPDECAAGGGGRGEGGAPRRPRLPL
SIO_010081: LOC121058318
subclass of: SO_0000673
so part of: LOC121058318
location: join(74373..74572,75473..75614,75863..76552)
location: region:74373-76552:1
so has part: feature:74373-74572:1:exon
so has part: feature:75473-75614:1:exon
so has part: feature:75863-76552:1:exon

XP_040389643.1
type: Protein
SIO_000068: ncbiprotein

position:74373:1
position: 74373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74373-74572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75473-75614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75863-76552:1:exon

LOC121058318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X3
translation: MGPGHNIAQFHPNTGVNLFFTKTKTSFVCSILFFGWLAPPFVFCFLSSAYTSHIEPALEDLFVISHISGHGRITQDLSVCPASPSFGSSFRVGRRGASTRWRQTTKRAPLPGPAFVCKGKLRGSLGTDTGGLWRSERVRARRSRSDPAAPGSGLRAGAVSQRRFPAPPEGAPPPPGAAHCSRQPEPSSGARSGTGREPRAAAAHEAPPAPARAAPPSGGRRRRKLPSGLAPRSPPPSGSRSPPSERGFRSARERPARRPGRRGAPRRRRRRSIGGGPGPGSRQPHSAVPACLEAAGALPPPC
SIO_010081: LOC121058318
subclass of: SO_0000673
so part of: LOC121058318
location: join(74373..74572,75473..75614,75876..76442)
location: region:74373-76442:1
so has part: feature:74373-74572:1:exon
so has part: feature:75473-75614:1:exon
so has part: feature:75876-76442:1:exon

XP_040389644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74373-74572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75473-75614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75876-76442:1:exon

LOC121058318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X1
translation: MACTPLCLLLSLICLHIAHRACFRGPLRYFSHQRTRTDNAGPQRLPGISQFRQLISGREEGSEHPLAADDKAGASPGPGAETEGIGVTQPVPRPGRAARPGACRCLAAGGESLTQARVWRPSDFTGSQGRDLSRPRARGADRAAARPAAPRDRRPGEGGAGYPRGLLRLQGKAARIARDGHRRALAKRACACPTKPQRPRCPGERAARRGCQSAPLPGPAGRGAATSRCRPLLPAAGAEQRRPQRHRARTPRCRRPRGAASAGSRRSSLRRPPPAEAPVRPRAPLASAQRQPEPAQRTRLPLRSGAARPEAWAAGGASATEAAKYRRRPRAGVPPAALSSTGLPGSCRGAPPSLLRPWRGRRPFKAFPDECAAGGGGRGEGGAPRRPRLPL
SIO_010081: LOC121058318
subclass of: SO_0000673
so part of: LOC121058318
location: join(74477..74572,75473..76552)
location: region:74477-76552:1
so has part: feature:74477-74572:1:exon
so has part: feature:75473-76552:1:exon

XP_040389642.1
type: Protein
SIO_000068: ncbiprotein

position:74477:1
position: 74477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74477-74572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75473-76552:1:exon

ERRFI1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ERRFI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 76531..86897
location: region:76531-86897:1
so has part: feature:76531-86897:1:exon
subclass of: SO_0000010

121058317
type: Gene
SIO_000068: ncbigene

position:76531:1
position: 76531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86897:1
position: 86897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76531-86897:1:exon

ERRFI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ERRFI1
product: ERBB receptor feedback inhibitor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533705.1
SIO_010081: ERRFI1
subclass of: SO_0000673
so part of: ERRFI1
location: join(76531..76664,83398..83593,83712..83788,84330..86897)
location: region:76531-86897:1
so has part: feature:76531-76664:1:exon
so has part: feature:83398-83593:1:exon
so has part: feature:83712-83788:1:exon
so has part: feature:84330-86897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76531-76664:1:exon

position:76664:1
position: 76664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83398-83593:1:exon

position:83398:1
position: 83398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83593:1
position: 83593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83712-83788:1:exon

position:83712:1
position: 83712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83788:1
position: 83788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:84330-86897:1:exon

position:84330:1
position: 84330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121058322
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77077..84413)
location: region:77077-84413:-1
so has part: feature:77077-84413:-1:exon
subclass of: SO_0000011

121058322
type: Gene
SIO_000068: ncbigene

position:77077:-1
position: 77077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84413:-1
position: 84413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77077-84413:-1:exon

LOC121058322
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058322
product: uncharacterized LOC121058322, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814167.1
SIO_010081: LOC121058322
subclass of: SO_0000673
so part of: LOC121058322
location: complement(join(77077..78031,80654..80729,82277..82364,84322..84413))
location: region:77077-84413:-1
so has part: feature:84322-84413:-1:exon
so has part: feature:82277-82364:-1:exon
so has part: feature:80654-80729:-1:exon
so has part: feature:77077-78031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84322-84413:-1:exon

position:84322:-1
position: 84322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82277-82364:-1:exon

position:82277:-1
position: 82277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82364:-1
position: 82364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80654-80729:-1:exon

position:80654:-1
position: 80654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80729:-1
position: 80729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77077-78031:-1:exon

position:78031:-1
position: 78031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121058322
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058322
product: uncharacterized LOC121058322, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005814166.1
SIO_010081: LOC121058322
subclass of: SO_0000673
so part of: LOC121058322
location: complement(join(78689..80729,82277..82364,84322..84413))
location: region:78689-84413:-1
so has part: feature:84322-84413:-1:exon
so has part: feature:82277-82364:-1:exon
so has part: feature:78689-80729:-1:exon

position:78689:-1
position: 78689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84322-84413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82277-82364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78689-80729:-1:exon

ERRFI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ERRFI1
product: ERBB receptor feedback inhibitor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533707.1
SIO_010081: ERRFI1
subclass of: SO_0000673
so part of: ERRFI1
location: join(82411..82624,83398..83593,83712..83788,84330..86897)
location: region:82411-86897:1
so has part: feature:82411-82624:1:exon
so has part: feature:83398-83593:1:exon
so has part: feature:83712-83788:1:exon
so has part: feature:84330-86897:1:exon

position:82411:1
position: 82411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82411-82624:1:exon

position:82624:1
position: 82624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83398-83593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83712-83788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84330-86897:1:exon

ERRFI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ERRFI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERBB receptor feedback inhibitor 1
translation: MSAAGVAAQEMRVPLKNGFLHASQGVGSLKTCWGSHSGFENTFFNVDPIAVAYNLNPSAEQHLPSIGHSSNHVSTSDPSFAESCIQVPSQKSSPAPVSPKNEQPISRCEDYLAPGFSKLSLAVGYVSEETPPHMPTKNGPIQFLCASSNDRSSRPLPPLPISEDLTPDEVDREVEFLTCSDTDFLLEDYELPPFKSSAPSRRSFRGCGQINYAYFDAPAGPKTEDTNPTQSLNGYTSSIYPPPQQLHRRLRRSHSGPAGSLNKPVVRLSGYLNRSSPNSDEDKPEIPPRVPIPPRALKPDYRRWSAEVASSAYSDEDRPPKVPPREPLSRSNSRTPSPKSLPSYLNGVMPPTQSFAPDPKYVSTKALQRQNSEGSSNKVPCILPIIENGKKASSTHYYLLPERPPYLDKYEKFFREAEETSSNMEMQSWSGDCVAASSATKLDSKPRVDITGHLKRKHLSYVVSP
SIO_010081: ERRFI1
subclass of: SO_0000673
so part of: ERRFI1
location: join(83472..83593,83712..83788,84330..85528)
location: region:83472-85528:1
so has part: feature:83472-83593:1:exon
so has part: feature:83712-83788:1:exon
so has part: feature:84330-85528:1:exon

XP_040389639.1
type: Protein
SIO_000068: ncbiprotein

position:83472:1
position: 83472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85528:1
position: 85528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83472-83593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83712-83788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84330-85528:1:exon

ERRFI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ERRFI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERBB receptor feedback inhibitor 1
translation: MSAAGVAAQEMRVPLKNGFLHASQGVGSLKTCWGSHSGFENTFFNVDPIAVAYNLNPSAEQHLPSIGHSSNHVSTSDPSFAESCIQVPSQKSSPAPVSPKNEQPISRCEDYLAPGFSKLSLAVGYVSEETPPHMPTKNGPIQFLCASSNDRSSRPLPPLPISEDLTPDEVDREVEFLTCSDTDFLLEDYELPPFKSSAPSRRSFRGCGQINYAYFDAPAGPKTEDTNPTQSLNGYTSSIYPPPQQLHRRLRRSHSGPAGSLNKPVVRLSGYLNRSSPNSDEDKPEIPPRVPIPPRALKPDYRRWSAEVASSAYSDEDRPPKVPPREPLSRSNSRTPSPKSLPSYLNGVMPPTQSFAPDPKYVSTKALQRQNSEGSSNKVPCILPIIENGKKASSTHYYLLPERPPYLDKYEKFFREAEETSSNMEMQSWSGDCVAASSATKLDSKPRVDITGHLKRKHLSYVVSP
SIO_010081: ERRFI1
subclass of: SO_0000673
so part of: ERRFI1
location: join(83472..83593,83712..83788,84330..85528)
location: region:83472-85528:1
so has part: feature:83472-83593:1:exon
so has part: feature:83712-83788:1:exon
so has part: feature:84330-85528:1:exon

XP_040389641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83472-83593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83712-83788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84330-85528:1:exon

PARK7
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(94533..103826)
location: region:94533-103826:-1
so has part: feature:94533-103826:-1:exon
subclass of: SO_0000010

121058320
type: Gene
SIO_000068: ncbigene

position:94533:-1
position: 94533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103826:-1
position: 103826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94533-103826:-1:exon

PARK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PARK7
product: Parkinsonism associated deglycase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533718.1
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94533..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100700,103591..103826))
location: region:94533-103826:-1
so has part: feature:103591-103826:-1:exon
so has part: feature:100597-100700:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94533-94984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103591-103826:-1:exon

position:103591:-1
position: 103591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100597-100700:-1:exon

position:100597:-1
position: 100597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100700:-1
position: 100700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99885-99986:-1:exon

position:99885:-1
position: 99885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99986:-1
position: 99986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99178-99237:-1:exon

position:99178:-1
position: 99178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99237:-1
position: 99237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98261-98330:-1:exon

position:98261:-1
position: 98261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98330:-1
position: 98330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95888-95974:-1:exon

position:95888:-1
position: 95888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95974:-1
position: 95974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94533-94984:-1:exon

position:94984:-1
position: 94984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PARK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PARK7
product: Parkinsonism associated deglycase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533713.1
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94533..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100731,103591..103824))
location: region:94533-103824:-1
so has part: feature:103591-103824:-1:exon
so has part: feature:100597-100731:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94533-94984:-1:exon

position:103824:-1
position: 103824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103591-103824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100597-100731:-1:exon

position:100731:-1
position: 100731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94533-94984:-1:exon

PARK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PARK7
product: Parkinsonism associated deglycase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533717.1
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94533..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100700,102850..102972))
location: region:94533-102972:-1
so has part: feature:102850-102972:-1:exon
so has part: feature:100597-100700:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94533-94984:-1:exon

position:102972:-1
position: 102972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102850-102972:-1:exon

position:102850:-1
position: 102850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100597-100700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94533-94984:-1:exon

PARK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PARK7
product: Parkinsonism associated deglycase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040533719.1
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94533..94984,95888..95974,98261..98330,99885..99986,100597..100731,102850..102968))
location: region:94533-102968:-1
so has part: feature:102850-102968:-1:exon
so has part: feature:100597-100731:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94533-94984:-1:exon

position:102968:-1
position: 102968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102850-102968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100597-100731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94533-94984:-1:exon

PARK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PARK7
product: Parkinsonism associated deglycase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533714.1
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94533..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100731,102850..102965))
location: region:94533-102965:-1
so has part: feature:102850-102965:-1:exon
so has part: feature:100597-100731:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94533-94984:-1:exon

position:102965:-1
position: 102965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102850-102965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100597-100731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94533-94984:-1:exon

PARK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PARK7
product: Parkinsonism associated deglycase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533716.1
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94533..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100731,101614..102767))
location: region:94533-102767:-1
so has part: feature:101614-102767:-1:exon
so has part: feature:100597-100731:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94533-94984:-1:exon

position:102767:-1
position: 102767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101614-102767:-1:exon

position:101614:-1
position: 101614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100597-100731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94533-94984:-1:exon

PARK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Parkinson disease protein 7 isoform X2
translation: MASKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKDPVQCSRDVFICPDASLEDARKESSAVKDVLKDQESRKGLIAAICAGPTALLAHGIGFGSKVTTHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVETLMGKEVAEQVKAPLILKE
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94824..94984,95888..95974,98261..98330,99885..99986,100597..100686))
location: region:94824-100686:-1
so has part: feature:100597-100686:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94824-94984:-1:exon

XP_040389653.1
type: Protein
SIO_000068: ncbiprotein

position:94824:-1
position: 94824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100686:-1
position: 100686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100597-100686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94824-94984:-1:exon

PARK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Parkinson disease protein 7 isoform X1
translation: MASKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKDPVQCSRDVFICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESSAVKDVLKDQESRKGLIAAICAGPTALLAHGIGFGSKVTTHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVETLMGKEVAEQVKAPLILKE
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94824..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100686))
location: region:94824-100686:-1
so has part: feature:100597-100686:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94824-94984:-1:exon

XP_040389647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100597-100686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94824-94984:-1:exon

PARK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Parkinson disease protein 7 isoform X1
translation: MASKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKDPVQCSRDVFICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESSAVKDVLKDQESRKGLIAAICAGPTALLAHGIGFGSKVTTHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVETLMGKEVAEQVKAPLILKE
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94824..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100686))
location: region:94824-100686:-1
so has part: feature:100597-100686:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94824-94984:-1:exon

XP_040389648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100597-100686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94824-94984:-1:exon

PARK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Parkinson disease protein 7 isoform X1
translation: MASKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKDPVQCSRDVFICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESSAVKDVLKDQESRKGLIAAICAGPTALLAHGIGFGSKVTTHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVETLMGKEVAEQVKAPLILKE
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94824..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100686))
location: region:94824-100686:-1
so has part: feature:100597-100686:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94824-94984:-1:exon

XP_040389650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100597-100686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94824-94984:-1:exon

PARK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Parkinson disease protein 7 isoform X1
translation: MASKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKDPVQCSRDVFICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESSAVKDVLKDQESRKGLIAAICAGPTALLAHGIGFGSKVTTHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVETLMGKEVAEQVKAPLILKE
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94824..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100686))
location: region:94824-100686:-1
so has part: feature:100597-100686:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94824-94984:-1:exon

XP_040389651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100597-100686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94824-94984:-1:exon

PARK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Parkinson disease protein 7 isoform X1
translation: MASKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKDPVQCSRDVFICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESSAVKDVLKDQESRKGLIAAICAGPTALLAHGIGFGSKVTTHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVETLMGKEVAEQVKAPLILKE
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(94824..94984,95888..95974,98261..98330,99178..99237,99885..99986,100597..100686))
location: region:94824-100686:-1
so has part: feature:100597-100686:-1:exon
so has part: feature:99885-99986:-1:exon
so has part: feature:99178-99237:-1:exon
so has part: feature:98261-98330:-1:exon
so has part: feature:95888-95974:-1:exon
so has part: feature:94824-94984:-1:exon

XP_040389652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100597-100686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99885-99986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99178-99237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98261-98330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95888-95974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94824-94984:-1:exon

TNFRSF9
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TNFRSF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 104341..109553
location: region:104341-109553:1
so has part: feature:104341-109553:1:exon
subclass of: SO_0000010

121058319
type: Gene
SIO_000068: ncbigene

position:104341:1
position: 104341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109553:1
position: 109553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104341-109553:1:exon

TNFRSF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TNFRSF9
product: TNF receptor superfamily member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040533712.1
SIO_010081: TNFRSF9
subclass of: SO_0000673
so part of: TNFRSF9
location: join(104341..104667,104750..104866,105123..105260,105696..105762,105857..105993,106214..106348,108120..109553)
location: region:104341-109553:1
so has part: feature:104341-104667:1:exon
so has part: feature:104750-104866:1:exon
so has part: feature:105123-105260:1:exon
so has part: feature:105696-105762:1:exon
so has part: feature:105857-105993:1:exon
so has part: feature:106214-106348:1:exon
so has part: feature:108120-109553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104341-104667:1:exon

position:104667:1
position: 104667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104750-104866:1:exon

position:104750:1
position: 104750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104866:1
position: 104866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105123-105260:1:exon

position:105123:1
position: 105123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105260:1
position: 105260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105696-105762:1:exon

position:105696:1
position: 105696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105762:1
position: 105762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:105857-105993:1:exon

position:105857:1
position: 105857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105993:1
position: 105993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:106214-106348:1:exon

position:106214:1
position: 106214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106348:1
position: 106348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108120-109553:1:exon

position:108120:1
position: 108120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TNFRSF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 9
translation: MGAAAARPPRASRARALLPAALLALALSPGPAAAAPCGADCPAGTFVVSAGCGRGADCRQCPPDTFSSAAGLSGCTLCRKCEGRFRYLKACSPKSDAECTCKEGYRCSGDGCSRCDRSCGVGEESAGSGCQTCHYGTFNDQPNGSCKNWTKCSANQVVEPGTAAKDVVCKHTSDNPTLATILSTTSPGIPLFVTVPGKNIQMDIIRISLAVAGLLCIVFLLPSCVCFSIWQKKKLHAVFKKMHTTPEQSVQEDACSCRFPEEEQGEYQDCGKSTEFRDLLEN
SIO_010081: TNFRSF9
subclass of: SO_0000673
so part of: TNFRSF9
location: join(104538..104667,104750..104866,105123..105260,105696..105762,105857..105993,106214..106348,108120..108244)
location: region:104538-108244:1
so has part: feature:104538-104667:1:exon
so has part: feature:104750-104866:1:exon
so has part: feature:105123-105260:1:exon
so has part: feature:105696-105762:1:exon
so has part: feature:105857-105993:1:exon
so has part: feature:106214-106348:1:exon
so has part: feature:108120-108244:1:exon

XP_040389646.1
type: Protein
SIO_000068: ncbiprotein

position:104538:1
position: 104538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108244:1
position: 108244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104538-104667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104750-104866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105123-105260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105696-105762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105857-105993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:106214-106348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108120-108244:1:exon

UTS2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: UTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 122615..126489
location: region:122615-126489:1
so has part: feature:122615-126489:1:exon
subclass of: SO_0000010

121058235
type: Gene
SIO_000068: ncbigene

position:122615:1
position: 122615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126489:1
position: 126489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122615-126489:1:exon

UTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: UTS2
product: urotensin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040533527.1
SIO_010081: UTS2
subclass of: SO_0000673
so part of: UTS2
location: join(122615..122753,124902..125003,125558..125601,126245..126489)
location: region:122615-126489:1
so has part: feature:122615-122753:1:exon
so has part: feature:124902-125003:1:exon
so has part: feature:125558-125601:1:exon
so has part: feature:126245-126489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122615-122753:1:exon

position:122753:1
position: 122753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124902-125003:1:exon

position:124902:1
position: 124902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125003:1
position: 125003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:125558-125601:1:exon

position:125558:1
position: 125558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125601:1
position: 125601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126245-126489:1:exon

position:126245:1
position: 126245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: UTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urotensin-2
translation: MYKLVFCCLIIISFSCPLFSLPTINTSEMSHQLSADEDSRLNLERLGSTSLLQFLQDLLSTLTEDNKADLSSNSYNPRENIKEIFYGNHPRIALLGRLLTKDRKQYKKRGNLSECFWKYCV
SIO_010081: UTS2
subclass of: SO_0000673
so part of: UTS2
location: join(122651..122753,124902..125003,125558..125601,126245..126361)
location: region:122651-126361:1
so has part: feature:122651-122753:1:exon
so has part: feature:124902-125003:1:exon
so has part: feature:125558-125601:1:exon
so has part: feature:126245-126361:1:exon

XP_040389461.1
type: Protein
SIO_000068: ncbiprotein

position:122651:1
position: 122651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126361:1
position: 126361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122651-122753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124902-125003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125558-125601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126245-126361:1:exon

PER3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(128834..153273)
location: region:128834-153273:-1
so has part: feature:128834-153273:-1:exon
subclass of: SO_0000010

121058233
type: Gene
SIO_000068: ncbigene

position:128834:-1
position: 128834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153273:-1
position: 153273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128834-153273:-1:exon

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PER3
product: period circadian regulator 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533524.1
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(128834..129408,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139941,140476..140603,141941..142085,146046..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..153273))
location: region:128834-153273:-1
so has part: feature:152619-153273:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146046-146122:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:128834-129408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152619-153273:-1:exon

position:152619:-1
position: 152619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

position:151294:-1
position: 151294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151448:-1
position: 151448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

position:150605:-1
position: 150605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150720:-1
position: 150720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

position:149523:-1
position: 149523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149724:-1
position: 149724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

position:148837:-1
position: 148837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148885:-1
position: 148885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

position:147311:-1
position: 147311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147453:-1
position: 147453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

position:146852:-1
position: 146852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146930:-1
position: 146930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:146046-146122:-1:exon

position:146046:-1
position: 146046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146122:-1
position: 146122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:141941-142085:-1:exon

position:141941:-1
position: 141941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142085:-1
position: 142085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:140476-140603:-1:exon

position:140476:-1
position: 140476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140603:-1
position: 140603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:139759-139941:-1:exon

position:139759:-1
position: 139759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139941:-1
position: 139941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:138844-139095:-1:exon

position:138844:-1
position: 138844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139095:-1
position: 139095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:137609-138345:-1:exon

position:137609:-1
position: 137609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138345:-1
position: 138345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:136332-136512:-1:exon

position:136332:-1
position: 136332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136512:-1
position: 136512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:135581-135761:-1:exon

position:135581:-1
position: 135581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135761:-1
position: 135761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:135122-135272:-1:exon

position:135122:-1
position: 135122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135272:-1
position: 135272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:128834-129408:-1:exon

position:129408:-1
position: 129408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PER3
product: period circadian regulator 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040533523.1
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(128836..129408,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139923,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..153272))
location: region:128836-153272:-1
so has part: feature:152619-153272:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139923:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:128836-129408:-1:exon

position:128836:-1
position: 128836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153272:-1
position: 153272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152619-153272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

position:146016:-1
position: 146016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

position:145622:-1
position: 145622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145778:-1
position: 145778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

position:144522:-1
position: 144522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144627:-1
position: 144627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

position:143987:-1
position: 143987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144112:-1
position: 144112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

position:143119:-1
position: 143119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143245:-1
position: 143245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139923:-1:exon

position:139923:-1
position: 139923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:128836-129408:-1:exon

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PER3
product: period circadian regulator 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040533521.1
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(128836..129408,135122..135272,135581..135761,136332..136512,137609..138342,138844..139095,139759..139941,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..153272))
location: region:128836-153272:-1
so has part: feature:152619-153272:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138342:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:128836-129408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152619-153272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138342:-1:exon

position:138342:-1
position: 138342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:128836-129408:-1:exon

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PER3
product: period circadian regulator 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040533520.1
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(128837..129408,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139941,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..153272))
location: region:128837-153272:-1
so has part: feature:152619-153272:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:128837-129408:-1:exon

position:128837:-1
position: 128837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152619-153272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:128837-129408:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X5
translation: MDVSESQGSRSERGAGRPSSAAPGAGSGREAAFNAAGVGKQEGEQREDAELRWGTREGASSGRKRCDGPKSSRSDFFSYESNGSSARSFRRQSKVNNSDQLDWSQSHKDLMMMMIQEMKKWLPEDKRSSSKPSTISALNYALQCVQQVQANKEFFQALNDRRVFQTGMMTYSIEELVTVASEHTPKNNDTFVVVFSLLSGRIVHISKQAASILNCKKEVLDSSRFVELLAPQDVSVFYTHTDQSHLPLWNVENQTASLYEYAQVKSFFCRIRGGKDQEQETHCYPFRITPYLVHVCTSVHIDAESCCLALAEKIHSGYEAPRIPMEKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSMLMYLHPEDRKRHSASCFLQTVRSDSTEEPGNVLYDDSKKTPLVPSYQQINCVDSIIRYLESCSIPVLKRKRKSSTNTSSSSSDDDKKAQRSQQEFKALEVSSQTPVSADWEEMLKKQTTAGIVGTPLADLTLSNKSPSVVSATSQCSYSSTIVHVPHPQSEVTTMEDTTVGNERMELLPVNALSLIMVPEELKPVGLTKETLSAHTQKEEQNYVDKFRQRILLSPFRTYLQQGSRSNNGHSCGQGDSPSKERSTASCKKGKHGKFKCQKPQRQSLDSHSCSKNRNSLPREKRTIRKQSFFPPEVSCLRSSSMNVFPPVGFPVYSDSLSNFPASPVGEELALCSLKPEPTSLSQLCCEAPSFPALYPPNLGTSMAVFFHSYPMYAQLPQYAFLPSPQYIYPPSSYPCTTVPLAPPPSAPSPIAPNSANQPFPASSATSTEEQQEGQHDWALQLSSSRGSSPLQLNLLQEELPKPVEPSIITDVRAQAEAKCDNDPEGSGNSASSPCASSEFTDHQLHEDSQSGTGSAASGSGSALFSSLDFHSNETSGYGTAGSGKSSKYFASNDSSETFKEEKNQEAKEKETPHKSKCESAWVMMDHTPEQVLMTYQMPNRIKEEVLKEDLAKLIVMQKQQPWFTDEQKEELAEVHAWIHTQSVPLQINTQVLQRQVWLIVLKEAWRRKAKTAGSASYKTKDLAIY
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(129301..129408,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139941,140476..140603,141941..142085,146046..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..152911))
location: region:129301-152911:-1
so has part: feature:152619-152911:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146046-146122:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:129301-129408:-1:exon

XP_040389458.1
type: Protein
SIO_000068: ncbiprotein

position:129301:-1
position: 129301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152911:-1
position: 152911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152619-152911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146046-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139759-139941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:129301-129408:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X4
translation: MDVSESQGSRSERGAGRPSSAAPGAGSGREAAFNAAGVGKQEGEQREDAELRWGTREGASSGRKRCDGPKSSRSDFFSYESNGSSARSFRRQSKVNNSDQLDWSQSHKDLMMMMIQEMKKWLPEDKRSSSKPSTISALNYALQCVQQVQANKEFFQALNDRRVFQTGMMTYSIEELVTVASEHTPKNNDTFVVVFSLLSGRIVHISKQAASILNCKKEVLDSSRFVELLAPQDVSVFYTHTDQSHLPLWNVENQTASLYEYAQVKSFFCRIRGGKDQEQETHCYPFRITPYLVHVCTSVHIDAESCCLALAEKIHSGYEAPRIPMEKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSMLMYLHPEDRPLMIAVHRKILKFAGQSPFEHLPIRFCTQNGDYVILDTSWSSFVNPWSRKVVFIIGRHKVRTSPLNEDVFAARNKETSSVEKEIRELQGQIYKLLLQPVHSSISSGYGSLGSSGSYEHYISIASSSDSNGNCAEETQEPITLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQAMSSEMLGGKRHSASCFLQTVRSDSTEEPGNVLYDDSKKTPLVPSYQQINCVDSIIRYLESCSIPVLKRKRKSSTNTSSSSSDDDKKAQRSQQEFKALEVSADWEEMLKKQTTAGIVGTPLADLTLSNKSPSVVSATSQCSYSSTIVHVPHPQSEVTTMEDTTVGNERMELLPVNALSLIMVPEELKPVGLTKETLSAHTQKEEQNYVDKFRQRILLSPFRTYLQQGSRSNNGHSCGQGDSPSKERSTASCKKGKHGKFKCQKPQRQSLDSHSCSKNRNSLPREKRTIRKQSFFPPEVSCLRSSSMNVFPPVGFPVYSDSLSNFPASPVGEELALCSLKPEPTSLSQLCCEAPSFPALYPPNLGTSMAVFFHSYPMYAQLPQYAFLPSPQYIYPPSSYPCTTVPLAPPPSAPSPIAPNSANQPFPASSATSTEEQQEGQHDWALQLSSSRGSSPLQLNLLQEELPKPVEPSIITDVRAQAEAKCDNDPEGSGNSASSPCASSEFTDHQLHEDSQSGTGSAASGSGSALFSSLDFHSNETSGYGTAGSGKSSKYFASNDSSETFKEEKNQEAKEKETPHKSKCESAWVMMDHTPEQVLMTYQMPNRIKEEVLKEDLAKLIVMQKQQPWFTDEQKEELAEVHAWIHTQSVPLQINTQVLQRQVWLIVLKEAWRRKAKTAGSASYKTKDLAIY
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(129301..129408,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139923,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..152911))
location: region:129301-152911:-1
so has part: feature:152619-152911:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139923:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:129301-129408:-1:exon

XP_040389457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152619-152911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139923:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129301-129408:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X2
translation: MDVSESQGSRSERGAGRPSSAAPGAGSGREAAFNAAGVGKQEGEQREDAELRWGTREGASSGRKRCDGPKSSRSDFFSYESNGSSARSFRRQSKVNNSDQLDWSQSHKDLMMMMIQEMKKWLPEDKRSSSKPSTISALNYALQCVQQVQANKEFFQALNDRRVFQTGMMTYSIEELVTVASEHTPKNNDTFVVVFSLLSGRIVHISKQAASILNCKKEVLDSSRFVELLAPQDVSVFYTHTDQSHLPLWNVENQTASLYEYAQVKSFFCRIRGGKDQEQETHCYPFRITPYLVHVCTSVHIDAESCCLALAEKIHSGYEAPRIPMEKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSMLMYLHPEDRPLMIAVHRKILKFAGQSPFEHLPIRFCTQNGDYVILDTSWSSFVNPWSRKVVFIIGRHKVRTSPLNEDVFAARNKETSSVEKEIRELQGQIYKLLLQPVHSSISSGYGSLGSSGSYEHYISIASSSDSNGNCAEETQEPITLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQAMSSEMLGGKRHSASCFLQTVRSDSTEEPGNVLYDDSKKTPLVPSYQQINCVDSIIRYLESCSIPVLKRKRKSSTNTSSSSSDDDKKAQRSQQEFKALEVSSQTPVSADWEEMLKKQTTAGIVGTPLADLTLSNKSPSVVSATSQCSYSSTIVHVPHPQSEVTTMEDTTVGNERMELLPVNALSLIMVPEELKPVGLTKETLSAHTQKEEQNYVDKFRQRILLSPFRTYLQQGSRSNNGHSCGQDSPSKERSTASCKKGKHGKFKCQKPQRQSLDSHSCSKNRNSLPREKRTIRKQSFFPPEVSCLRSSSMNVFPPVGFPVYSDSLSNFPASPVGEELALCSLKPEPTSLSQLCCEAPSFPALYPPNLGTSMAVFFHSYPMYAQLPQYAFLPSPQYIYPPSSYPCTTVPLAPPPSAPSPIAPNSANQPFPASSATSTEEQQEGQHDWALQLSSSRGSSPLQLNLLQEELPKPVEPSIITDVRAQAEAKCDNDPEGSGNSASSPCASSEFTDHQLHEDSQSGTGSAASGSGSALFSSLDFHSNETSGYGTAGSGKSSKYFASNDSSETFKEEKNQEAKEKETPHKSKCESAWVMMDHTPEQVLMTYQMPNRIKEEVLKEDLAKLIVMQKQQPWFTDEQKEELAEVHAWIHTQSVPLQINTQVLQRQVWLIVLKEAWRRKAKTAGSASYKTKDLAIY
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(129301..129408,135122..135272,135581..135761,136332..136512,137609..138342,138844..139095,139759..139941,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..152911))
location: region:129301-152911:-1
so has part: feature:152619-152911:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138342:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:129301-129408:-1:exon

XP_040389455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152619-152911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138342:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129301-129408:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X1
translation: MDVSESQGSRSERGAGRPSSAAPGAGSGREAAFNAAGVGKQEGEQREDAELRWGTREGASSGRKRCDGPKSSRSDFFSYESNGSSARSFRRQSKVNNSDQLDWSQSHKDLMMMMIQEMKKWLPEDKRSSSKPSTISALNYALQCVQQVQANKEFFQALNDRRVFQTGMMTYSIEELVTVASEHTPKNNDTFVVVFSLLSGRIVHISKQAASILNCKKEVLDSSRFVELLAPQDVSVFYTHTDQSHLPLWNVENQTASLYEYAQVKSFFCRIRGGKDQEQETHCYPFRITPYLVHVCTSVHIDAESCCLALAEKIHSGYEAPRIPMEKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSMLMYLHPEDRPLMIAVHRKILKFAGQSPFEHLPIRFCTQNGDYVILDTSWSSFVNPWSRKVVFIIGRHKVRTSPLNEDVFAARNKETSSVEKEIRELQGQIYKLLLQPVHSSISSGYGSLGSSGSYEHYISIASSSDSNGNCAEETQEPITLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQAMSSEMLGGKRHSASCFLQTVRSDSTEEPGNVLYDDSKKTPLVPSYQQINCVDSIIRYLESCSIPVLKRKRKSSTNTSSSSSDDDKKAQRSQQEFKALEVSSQTPVSADWEEMLKKQTTAGIVGTPLADLTLSNKSPSVVSATSQCSYSSTIVHVPHPQSEVTTMEDTTVGNERMELLPVNALSLIMVPEELKPVGLTKETLSAHTQKEEQNYVDKFRQRILLSPFRTYLQQGSRSNNGHSCGQGDSPSKERSTASCKKGKHGKFKCQKPQRQSLDSHSCSKNRNSLPREKRTIRKQSFFPPEVSCLRSSSMNVFPPVGFPVYSDSLSNFPASPVGEELALCSLKPEPTSLSQLCCEAPSFPALYPPNLGTSMAVFFHSYPMYAQLPQYAFLPSPQYIYPPSSYPCTTVPLAPPPSAPSPIAPNSANQPFPASSATSTEEQQEGQHDWALQLSSSRGSSPLQLNLLQEELPKPVEPSIITDVRAQAEAKCDNDPEGSGNSASSPCASSEFTDHQLHEDSQSGTGSAASGSGSALFSSLDFHSNETSGYGTAGSGKSSKYFASNDSSETFKEEKNQEAKEKETPHKSKCESAWVMMDHTPEQVLMTYQMPNRIKEEVLKEDLAKLIVMQKQQPWFTDEQKEELAEVHAWIHTQSVPLQINTQVLQRQVWLIVLKEAWRRKAKTAGSASYKTKDLAIY
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(129301..129408,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139941,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..152911))
location: region:129301-152911:-1
so has part: feature:152619-152911:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:129301-129408:-1:exon

XP_040389454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152619-152911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129301-129408:-1:exon

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PER3
product: period circadian regulator 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040533525.1
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(129924..133822,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139923,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..153271))
location: region:129924-153271:-1
so has part: feature:152619-153271:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139923:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:129924-133822:-1:exon

position:129924:-1
position: 129924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153271:-1
position: 153271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152619-153271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139923:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129924-133822:-1:exon

position:133822:-1
position: 133822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PER3
product: period circadian regulator 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040533522.1
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(129924..133822,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139941,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..153271))
location: region:129924-153271:-1
so has part: feature:152619-153271:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:129924-133822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152619-153271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:129924-133822:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X6
translation: MDVSESQGSRSERGAGRPSSAAPGAGSGREAAFNAAGVGKQEGEQREDAELRWGTREGASSGRKRCDGPKSSRSDFFSYESNGSSARSFRRQSKVNNSDQLDWSQSHKDLMMMMIQEMKKWLPEDKRSSSKPSTISALNYALQCVQQVQANKEFFQALNDRRVFQTGMMTYSIEELVTVASEHTPKNNDTFVVVFSLLSGRIVHISKQAASILNCKKEVLDSSRFVELLAPQDVSVFYTHTDQSHLPLWNVENQTASLYEYAQVKSFFCRIRGGKDQEQETHCYPFRITPYLVHVCTSVHIDAESCCLALAEKIHSGYEAPRIPMEKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSMLMYLHPEDRPLMIAVHRKILKFAGQSPFEHLPIRFCTQNGDYVILDTSWSSFVNPWSRKVVFIIGRHKVRTSPLNEDVFAARNKETSSVEKEIRELQGQIYKLLLQPVHSSISSGYGSLGSSGSYEHYISIASSSDSNGNCAEETQEPITLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQAMSSEMLGGKRHSASCFLQTVRSDSTEEPGNVLYDDSKKTPLVPSYQQINCVDSIIRYLESCSIPVLKRKRKSSTNTSSSSSDDDKKAQRSQQEFKALEVSADWEEMLKKQTTAGIVGTPLADLTLSNKSPSVVSATSQCSYSSTIVHVPHPQSEVTTMEDTTVGNERMELLPVNALSLIMVPEELKPVGLTKETLSAHTQKEEQNYVDKFRQRILLSPFRTYLQQGSRSNNGHSCGQGDSPSKERSTASCKKGKHGKFKCQKPQRQSLDSHSCSKNRNSLPREKRTIRKQSFFPPEVSCLRSSSMNVFPPVGFPVYSDSLSNFPASPVGEELALCSLKPEPTSLSQLCCEAPSFPALYPPNLGTSMAVFFHSYPMYAQLPQYAFLPSPQYIYPPSSYPCTTVPLAPPPSAPSPIAPNSANQPFPASSATSTEEQQEGQHDWALQLSSSRGSSPLQLNLLQEELPKPVEPSIITDVRAQAEAKCDNDPEGSGNSASSPCASSEFTDHQLHEDSQSGTGSAASGSGSALFSSLDFHSNETSGYGTAGSGKSSKYFASNDSSETFKEEKNQEAKEKETPHKSKCESAWVMMDHTPEQVLMTYQMPNRIKEEVLKEDLAKLIVMQKQQPWFTDEQKEELAEVHAWIHTQSVPLQINTQGCVTCNIREASCEADDNTENKGKSIPLLQH
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(133730..133822,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139923,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..152911))
location: region:133730-152911:-1
so has part: feature:152619-152911:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139923:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:133730-133822:-1:exon

XP_040389459.1
type: Protein
SIO_000068: ncbiprotein

position:133730:-1
position: 133730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152619-152911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139923:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:133730-133822:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X3
translation: MDVSESQGSRSERGAGRPSSAAPGAGSGREAAFNAAGVGKQEGEQREDAELRWGTREGASSGRKRCDGPKSSRSDFFSYESNGSSARSFRRQSKVNNSDQLDWSQSHKDLMMMMIQEMKKWLPEDKRSSSKPSTISALNYALQCVQQVQANKEFFQALNDRRVFQTGMMTYSIEELVTVASEHTPKNNDTFVVVFSLLSGRIVHISKQAASILNCKKEVLDSSRFVELLAPQDVSVFYTHTDQSHLPLWNVENQTASLYEYAQVKSFFCRIRGGKDQEQETHCYPFRITPYLVHVCTSVHIDAESCCLALAEKIHSGYEAPRIPMEKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSMLMYLHPEDRPLMIAVHRKILKFAGQSPFEHLPIRFCTQNGDYVILDTSWSSFVNPWSRKVVFIIGRHKVRTSPLNEDVFAARNKETSSVEKEIRELQGQIYKLLLQPVHSSISSGYGSLGSSGSYEHYISIASSSDSNGNCAEETQEPITLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQAMSSEMLGGKRHSASCFLQTVRSDSTEEPGNVLYDDSKKTPLVPSYQQINCVDSIIRYLESCSIPVLKRKRKSSTNTSSSSSDDDKKAQRSQQEFKALEVSSQTPVSADWEEMLKKQTTAGIVGTPLADLTLSNKSPSVVSATSQCSYSSTIVHVPHPQSEVTTMEDTTVGNERMELLPVNALSLIMVPEELKPVGLTKETLSAHTQKEEQNYVDKFRQRILLSPFRTYLQQGSRSNNGHSCGQGDSPSKERSTASCKKGKHGKFKCQKPQRQSLDSHSCSKNRNSLPREKRTIRKQSFFPPEVSCLRSSSMNVFPPVGFPVYSDSLSNFPASPVGEELALCSLKPEPTSLSQLCCEAPSFPALYPPNLGTSMAVFFHSYPMYAQLPQYAFLPSPQYIYPPSSYPCTTVPLAPPPSAPSPIAPNSANQPFPASSATSTEEQQEGQHDWALQLSSSRGSSPLQLNLLQEELPKPVEPSIITDVRAQAEAKCDNDPEGSGNSASSPCASSEFTDHQLHEDSQSGTGSAASGSGSALFSSLDFHSNETSGYGTAGSGKSSKYFASNDSSETFKEEKNQEAKEKETPHKSKCESAWVMMDHTPEQVLMTYQMPNRIKEEVLKEDLAKLIVMQKQQPWFTDEQKEELAEVHAWIHTQSVPLQINTQGCVTCNIREASCEADDNTENKGKSIPLLQH
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(133730..133822,135122..135272,135581..135761,136332..136512,137609..138345,138844..139095,139759..139941,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..152911))
location: region:133730-152911:-1
so has part: feature:152619-152911:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135581-135761:-1:exon
so has part: feature:135122-135272:-1:exon
so has part: feature:133730-133822:-1:exon

XP_040389456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152619-152911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135581-135761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135122-135272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:133730-133822:-1:exon

PER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: PER3
product: period circadian regulator 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005814128.1
SIO_010081: PER3
so part of: PER3
location: complement(join(135751..135761,136332..136512,136963..137149,137609..138345,138844..139095,139759..139941,140476..140603,141941..142085,143119..143245,143987..144112,144522..144627,145622..145778,146016..146122,146852..146930,147311..147453,148837..148885,149523..149724,150605..150720,151294..151448,152619..153271))
location: region:135751-153271:-1
so has part: feature:152619-153271:-1:exon
so has part: feature:151294-151448:-1:exon
so has part: feature:150605-150720:-1:exon
so has part: feature:149523-149724:-1:exon
so has part: feature:148837-148885:-1:exon
so has part: feature:147311-147453:-1:exon
so has part: feature:146852-146930:-1:exon
so has part: feature:146016-146122:-1:exon
so has part: feature:145622-145778:-1:exon
so has part: feature:144522-144627:-1:exon
so has part: feature:143987-144112:-1:exon
so has part: feature:143119-143245:-1:exon
so has part: feature:141941-142085:-1:exon
so has part: feature:140476-140603:-1:exon
so has part: feature:139759-139941:-1:exon
so has part: feature:138844-139095:-1:exon
so has part: feature:137609-138345:-1:exon
so has part: feature:136963-137149:-1:exon
so has part: feature:136332-136512:-1:exon
so has part: feature:135751-135761:-1:exon

position:135751:-1
position: 135751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152619-153271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151294-151448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150605-150720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149523-149724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148837-148885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147311-147453:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146852-146930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146016-146122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145622-145778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144522-144627:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143987-144112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143119-143245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141941-142085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:140476-140603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:139759-139941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138844-139095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:137609-138345:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136963-137149:-1:exon

position:136963:-1
position: 136963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137149:-1
position: 137149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:136332-136512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:135751-135761:-1:exon

VAMP3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: VAMP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(153764..157973)
location: region:153764-157973:-1
so has part: feature:153764-157973:-1:exon
subclass of: SO_0000010

121058234
type: Gene
SIO_000068: ncbigene

position:153764:-1
position: 153764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157973:-1
position: 157973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153764-157973:-1:exon

VAMP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: VAMP3
product: vesicle associated membrane protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533526.1
SIO_010081: VAMP3
subclass of: SO_0000673
so part of: VAMP3
location: complement(join(153764..153958,154715..154766,155473..155631,156275..156356,157802..157973))
location: region:153764-157973:-1
so has part: feature:157802-157973:-1:exon
so has part: feature:156275-156356:-1:exon
so has part: feature:155473-155631:-1:exon
so has part: feature:154715-154766:-1:exon
so has part: feature:153764-153958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157802-157973:-1:exon

position:157802:-1
position: 157802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156275-156356:-1:exon

position:156275:-1
position: 156275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156356:-1
position: 156356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155473-155631:-1:exon

position:155473:-1
position: 155473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155631:-1
position: 155631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:154715-154766:-1:exon

position:154715:-1
position: 154715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154766:-1
position: 154766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153764-153958:-1:exon

position:153958:-1
position: 153958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VAMP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: VAMP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 3
translation: MSASVPGSSNVAAGSNRRLQQTQHQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWAILIAVVLFIIIIIIVWSAFS
SIO_010081: VAMP3
subclass of: SO_0000673
so part of: VAMP3
location: complement(join(153939..153958,154715..154766,155473..155631,156275..156356,157802..157803))
location: region:153939-157803:-1
so has part: feature:157802-157803:-1:exon
so has part: feature:156275-156356:-1:exon
so has part: feature:155473-155631:-1:exon
so has part: feature:154715-154766:-1:exon
so has part: feature:153939-153958:-1:exon

XP_040389460.1
type: Protein
SIO_000068: ncbiprotein

position:153939:-1
position: 153939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157803:-1
position: 157803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157802-157803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156275-156356:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155473-155631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154715-154766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153939-153958:-1:exon

CAMTA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(162596..538040)
location: region:162596-538040:-1
so has part: feature:162596-538040:-1:exon
subclass of: SO_0000010

121058414
type: Gene
SIO_000068: ncbigene

position:162596:-1
position: 162596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538040:-1
position: 538040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162596-538040:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040533948.1
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(162596..164879,180150..180224,180417..180610,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,534043..534136,537962..538040))
location: region:162596-538040:-1
so has part: feature:537962-538040:-1:exon
so has part: feature:534043-534136:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:162596-164879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537962-538040:-1:exon

position:537962:-1
position: 537962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534043-534136:-1:exon

position:534043:-1
position: 534043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534136:-1
position: 534136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:507349-507467:-1:exon

position:507349:-1
position: 507349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507467:-1
position: 507467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434818-434885:-1:exon

position:434818:-1
position: 434818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434885:-1
position: 434885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:391294-391429:-1:exon

position:391294:-1
position: 391294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391429:-1
position: 391429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:303641-303712:-1:exon

position:303641:-1
position: 303641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303712:-1
position: 303712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:229118-229271:-1:exon

position:229118:-1
position: 229118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229271:-1
position: 229271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:218562-218702:-1:exon

position:218562:-1
position: 218562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218702:-1
position: 218702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:214447-216302:-1:exon

position:214447:-1
position: 214447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216302:-1
position: 216302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:210219-210345:-1:exon

position:210219:-1
position: 210219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210345:-1
position: 210345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:209110-209244:-1:exon

position:209110:-1
position: 209110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209244:-1
position: 209244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:191000-191139:-1:exon

position:191000:-1
position: 191000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191139:-1
position: 191139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:190558-190754:-1:exon

position:190558:-1
position: 190558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190754:-1
position: 190754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:190127-190205:-1:exon

position:190127:-1
position: 190127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190205:-1
position: 190205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:188953-189268:-1:exon

position:188953:-1
position: 188953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189268:-1
position: 189268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:188027-188550:-1:exon

position:188027:-1
position: 188027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188550:-1
position: 188550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:185540-185727:-1:exon

position:185540:-1
position: 185540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185727:-1
position: 185727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
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CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
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CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040533945.1
SIO_010081: CAMTA1
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CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533946.1
SIO_010081: CAMTA1
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CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533942.1
SIO_010081: CAMTA1
subclass of: SO_0000673
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CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040533949.1
SIO_010081: CAMTA1
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type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519629-519772:-1:exon

position:519629:-1
position: 519629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:162596-164879:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533943.1
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(162596..164879,169981..170162,175092..175122,180150..180224,180417..180610,183364..183384,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,519629..519772))
location: region:162596-519772:-1
so has part: feature:519629-519772:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:183364-183384:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:175092-175122:-1:exon
so has part: feature:169981-170162:-1:exon
so has part: feature:162596-164879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519629-519772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:183364-183384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:175092-175122:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:169981-170162:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:162596-164879:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X6
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSAHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTGSSESLSMLPSTVSEELVLSTTLEGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVSTLGIPSVKTESSSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPEANGSIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYSQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQPQLGQNPRIQCPSSTDSSAESWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSATETISPSEGIRDYGRELSQHIPEVAGYRGSGSQAGIKWNPKDIYIGVSAVQVAGSQKGTALGKDTVAHRLRQREQMNVLMMADREMVDAELLSYRDNVGDEDCLPHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPLVERTESAAMSTTMSWLASYLADVDHLPSAAQIRSLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRKQNRRAATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHRVKELKKAKELEDTQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(164816..164879,180150..180224,180417..180610,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,534043..534109))
location: region:164816-534109:-1
so has part: feature:534043-534109:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:164816-164879:-1:exon

XP_040389882.1
type: Protein
SIO_000068: ncbiprotein

position:164816:-1
position: 164816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534109:-1
position: 534109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534043-534109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:164816-164879:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X3
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSAHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTGSSESLSMLPSTVSEELVLSTTLEGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVSTLGIPSVKTESSSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPEANGSIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYSQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQPQLGQNPRIQCPSSTDSSAESWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSATETISPSEGIRDYGRELSQHIPEVAGYRGSGSQAGIKWNPKDIYIGVSAVQVAGSQKGTALGKDTVAHRLRQREQMNVLMMADREMVDAELLSYRDNVGDEDCLPHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPLVERTESAAMSTTMSWLASYLADVDHLPSAAQIRSLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRKQNRRAATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHRVKELKKAKELEDTQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(164816..164879,180150..180224,180417..180610,183364..183384,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,534043..534109))
location: region:164816-534109:-1
so has part: feature:534043-534109:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:183364-183384:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:164816-164879:-1:exon

XP_040389878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534043-534109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:183364-183384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:164816-164879:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X1
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSAHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTGSSESLSMLPSTVSEELVLSTTLEGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVSTLGIPSVKTESSSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPEANGSIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYSQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQPQLGQNPRIQCPSSTDSSAESWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSATETISPSEGIRDYGRELSQHIPEVAGYRGSGSQAGIKWNPKDIYIGVSAVQVAGSQKGTALGKDTVAHRLRQREQMNVLMMADREMVDAELLSYRDNVGDEDCLPHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPLVERTESAAMSTTMSWLASYLADVDHLPSAAQIRSLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRKQNRRAATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSPLVDHRLYKRGLNVFGAQMCVLNCRPHALGCHSYWAFLSFLFCNPNEISGKRQELPFLKCPTGYFSSQSNRVKELKKAKELEDTQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(164816..164879,169981..170162,175092..175122,180150..180224,180417..180610,183364..183384,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,534043..534109))
location: region:164816-534109:-1
so has part: feature:534043-534109:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:183364-183384:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:175092-175122:-1:exon
so has part: feature:169981-170162:-1:exon
so has part: feature:164816-164879:-1:exon

XP_040389876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534043-534109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:183364-183384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:175092-175122:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:169981-170162:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:164816-164879:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X7
translation: MAAENKPEDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSAHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTGSSESLSMLPSTVSEELVLSTTLEGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVSTLGIPSVKTESSSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPEANGSIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYSQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQPQLGQNPRIQCPSSTDSSAESWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSATETISPSEGIRDYGRELSQHIPEVAGYRGSGSQAGIKWNPKDIYIGVSAVQVAGSQKGTALGKDTVAHRLRQREQMNVLMMADREMVDAELLSYRDNVGDEDCLPHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPLVERTESAAMSTTMSWLASYLADVDHLPSAAQIRSLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRKQNRRAATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHRVKELKKAKELEDTQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(164816..164879,180150..180224,180417..180610,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,519629..519653))
location: region:164816-519653:-1
so has part: feature:519629-519653:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:164816-164879:-1:exon

XP_040389883.1
type: Protein
SIO_000068: ncbiprotein

position:519653:-1
position: 519653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519629-519653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:164816-164879:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X2
translation: MAAENKPEDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSAHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTGSSESLSMLPSTVSEELVLSTTLEGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVSTLGIPSVKTESSSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPEANGSIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYSQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQPQLGQNPRIQCPSSTDSSAESWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSATETISPSEGIRDYGRELSQHIPEVAGYRGSGSQAGIKWNPKDIYIGVSAVQVAGSQKGTALGKDTVAHRLRQREQMNVLMMADREMVDAELLSYRDNVGDEDCLPHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPLVERTESAAMSTTMSWLASYLADVDHLPSAAQIRSLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRKQNRRAATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSPLVDHRLYKRGLNVFGAQMCVLNCRPHALGCHSYWAFLSFLFCNPNEISGKRQELPFLKCPTGYFSSQSNRVKELKKAKELEDTQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(164816..164879,169981..170162,175092..175122,180150..180224,180417..180610,183364..183384,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,519629..519653))
location: region:164816-519653:-1
so has part: feature:519629-519653:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:183364-183384:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:175092-175122:-1:exon
so has part: feature:169981-170162:-1:exon
so has part: feature:164816-164879:-1:exon

XP_040389877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519629-519653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:183364-183384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:175092-175122:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:169981-170162:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:164816-164879:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X4
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSAHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTGSSESLSMLPSTVSEELVLSTTLEGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVSTLGIPSVKTESSSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPEANGSIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYSQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQPQLGQNPRIQCPSSTDSSAESWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSATETISPSEGIRDYGRELSQHIPEVAGYRGSGSQAGIKWNPKDIYIGVSAVQVAGSQKGTALGKDTVAHRLRQREQMNVLMMADREMVDAELLSYRDNVGDEDCLPHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPLVERTESAAMSTTMSWLASYLADVDHLPSAAQIRSLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRKQNRRAATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(164847..164879,175092..175122,180150..180224,180417..180610,183364..183384,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,534043..534109))
location: region:164847-534109:-1
so has part: feature:534043-534109:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:183364-183384:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:175092-175122:-1:exon
so has part: feature:164847-164879:-1:exon

XP_040389879.1
type: Protein
SIO_000068: ncbiprotein

position:164847:-1
position: 164847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534043-534109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:183364-183384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:175092-175122:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:164847-164879:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X5
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSAHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTGSSESLSMLPSTVSEELVLSTTLEGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVSTLGIPSVKTESSSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPEANGSIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYSQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQPQLGQNPRIQCPSSTDSSAESWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSATETISPSEGIRDYGRELSQHIPEVAGYRGSGSQAGIKWNPKDIYIGVSAVQVAGSQKGTALGKDTVAHRLRQREQMNVLMMADREMVDAELLSYRDNVGDEDCLPHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPLVERTESAAMSTTMSWLASYLADVDHLPSAAQIRSLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRKQNRRAATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSPLVDHRLYKRAISALRATE
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(164875..164879,169981..170005,175092..175122,180150..180224,180417..180610,183364..183384,184294..184365,184864..185110,185540..185727,188027..188550,188953..189268,190127..190205,190558..190754,191000..191139,209110..209244,210219..210345,214447..216302,218562..218702,229118..229271,303641..303712,391294..391429,434818..434885,507349..507467,534043..534109))
location: region:164875-534109:-1
so has part: feature:534043-534109:-1:exon
so has part: feature:507349-507467:-1:exon
so has part: feature:434818-434885:-1:exon
so has part: feature:391294-391429:-1:exon
so has part: feature:303641-303712:-1:exon
so has part: feature:229118-229271:-1:exon
so has part: feature:218562-218702:-1:exon
so has part: feature:214447-216302:-1:exon
so has part: feature:210219-210345:-1:exon
so has part: feature:209110-209244:-1:exon
so has part: feature:191000-191139:-1:exon
so has part: feature:190558-190754:-1:exon
so has part: feature:190127-190205:-1:exon
so has part: feature:188953-189268:-1:exon
so has part: feature:188027-188550:-1:exon
so has part: feature:185540-185727:-1:exon
so has part: feature:184864-185110:-1:exon
so has part: feature:184294-184365:-1:exon
so has part: feature:183364-183384:-1:exon
so has part: feature:180417-180610:-1:exon
so has part: feature:180150-180224:-1:exon
so has part: feature:175092-175122:-1:exon
so has part: feature:169981-170005:-1:exon
so has part: feature:164875-164879:-1:exon

XP_040389880.1
type: Protein
SIO_000068: ncbiprotein

position:164875:-1
position: 164875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534043-534109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507349-507467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434818-434885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391294-391429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303641-303712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229118-229271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218562-218702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214447-216302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210219-210345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209110-209244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191000-191139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190558-190754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190127-190205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188953-189268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188027-188550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:185540-185727:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184864-185110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184294-184365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:183364-183384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180417-180610:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:180150-180224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:175092-175122:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:169981-170005:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:164875-164879:-1:exon

LOC121058415
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058415
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(443687..476444)
location: region:443687-476444:-1
so has part: feature:443687-476444:-1:exon
subclass of: SO_0000011

121058415
type: Gene
SIO_000068: ncbigene

position:443687:-1
position: 443687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476444:-1
position: 476444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443687-476444:-1:exon

LOC121058415
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058415
product: uncharacterized LOC121058415
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814196.1
SIO_010081: LOC121058415
subclass of: SO_0000673
so part of: LOC121058415
location: complement(join(443687..444719,476349..476444))
location: region:443687-476444:-1
so has part: feature:476349-476444:-1:exon
so has part: feature:443687-444719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476349-476444:-1:exon

position:476349:-1
position: 476349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443687-444719:-1:exon

position:444719:-1
position: 444719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNAJC11
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DNAJC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 538104..559875
location: region:538104-559875:1
so has part: feature:538104-559875:1:exon
subclass of: SO_0000010

121058329
type: Gene
SIO_000068: ncbigene

position:538104:1
position: 538104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559875:1
position: 559875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538104-559875:1:exon

DNAJC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNAJC11
product: DnaJ heat shock protein family (Hsp40) member C11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 196 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533728.1
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(538104..538235,541915..542044,544409..544482,545632..545733,550993..551121,551878..552000,553459..553532,554568..554757,555125..555210,555664..555780,556735..556890,557195..557264,557386..557443,558085..558227,558694..558823,559618..559875)
location: region:538104-559875:1
so has part: feature:538104-538235:1:exon
so has part: feature:541915-542044:1:exon
so has part: feature:544409-544482:1:exon
so has part: feature:545632-545733:1:exon
so has part: feature:550993-551121:1:exon
so has part: feature:551878-552000:1:exon
so has part: feature:553459-553532:1:exon
so has part: feature:554568-554757:1:exon
so has part: feature:555125-555210:1:exon
so has part: feature:555664-555780:1:exon
so has part: feature:556735-556890:1:exon
so has part: feature:557195-557264:1:exon
so has part: feature:557386-557443:1:exon
so has part: feature:558085-558227:1:exon
so has part: feature:558694-558823:1:exon
so has part: feature:559618-559875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538104-538235:1:exon

position:538235:1
position: 538235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541915-542044:1:exon

position:541915:1
position: 541915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542044:1
position: 542044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544409-544482:1:exon

position:544409:1
position: 544409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544482:1
position: 544482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545632-545733:1:exon

position:545632:1
position: 545632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545733:1
position: 545733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550993-551121:1:exon

position:550993:1
position: 550993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551121:1
position: 551121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551878-552000:1:exon

position:551878:1
position: 551878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552000:1
position: 552000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:553459-553532:1:exon

position:553459:1
position: 553459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553532:1
position: 553532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:554568-554757:1:exon

position:554568:1
position: 554568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554757:1
position: 554757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:555125-555210:1:exon

position:555125:1
position: 555125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555210:1
position: 555210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:555664-555780:1:exon

position:555664:1
position: 555664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555780:1
position: 555780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:556735-556890:1:exon

position:556735:1
position: 556735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556890:1
position: 556890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:557195-557264:1:exon

position:557195:1
position: 557195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557264:1
position: 557264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:557386-557443:1:exon

position:557386:1
position: 557386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557443:1
position: 557443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:558085-558227:1:exon

position:558085:1
position: 558085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558227:1
position: 558227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:558694-558823:1:exon

position:558694:1
position: 558694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558823:1
position: 558823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:559618-559875:1:exon

position:559618:1
position: 559618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNAJC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 11 isoform X2
translation: MAAALAEEAPDNEDYYALLNVRREASQEELKAAYRRLCMLYHPDKHRDPELKTQAERLFNLVHQAYEVLSDPQTRAIYDIYGRRGLEMEGWEVVERKRTPAEIREEFERLQREREERRLQQRTNPKGTISVGIDATDLFDRYDEEYEDVQGSSFPQIEINKMHISQSIEAPLTATDTAILSGNLSTQNGNGGGSINLALRRVTSAKGWGELEFGAGDLQGPLFGLKIFRNLTPRCFITTNCALQFSSRGIRPGLTTVLARNLDKNTMGYLQWRWGIQSAMNTSVVRDTKTSHFTVALQLGIPHSFMMVSYQHKFQDEDQTRVKGSLKAGFFGTIVEYGAERKISRHSILGATVSVGVPQGVSLKIKLNRASQTYFFPVHLTDQLLPSAVFYATVGPLVIYFAMHRLIIKPYLRAQKERELEKQRESTASDILQKKQEAEAAVRLMQESVRRIIEAEEARMGLIVVNAWYGKFVNDNSRKNEKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKSLKVLYQFRGVLHQVMSADNEALRIPKQSHRIDADG
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(538164..538235,541915..542044,544409..544482,545632..545733,550993..551121,551878..552000,553459..553532,554568..554757,555125..555210,555664..555780,556735..556890,557195..557264,557386..557443,558085..558227,558694..558823,559618..559643)
location: region:538164-559643:1
so has part: feature:538164-538235:1:exon
so has part: feature:541915-542044:1:exon
so has part: feature:544409-544482:1:exon
so has part: feature:545632-545733:1:exon
so has part: feature:550993-551121:1:exon
so has part: feature:551878-552000:1:exon
so has part: feature:553459-553532:1:exon
so has part: feature:554568-554757:1:exon
so has part: feature:555125-555210:1:exon
so has part: feature:555664-555780:1:exon
so has part: feature:556735-556890:1:exon
so has part: feature:557195-557264:1:exon
so has part: feature:557386-557443:1:exon
so has part: feature:558085-558227:1:exon
so has part: feature:558694-558823:1:exon
so has part: feature:559618-559643:1:exon

XP_040389662.1
type: Protein
SIO_000068: ncbiprotein

position:538164:1
position: 538164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559643:1
position: 559643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538164-538235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541915-542044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544409-544482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545632-545733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550993-551121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551878-552000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553459-553532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554568-554757:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555125-555210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555664-555780:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556735-556890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:557195-557264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:557386-557443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:558085-558227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:558694-558823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:559618-559643:1:exon

DNAJC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNAJC11
product: DnaJ heat shock protein family (Hsp40) member C11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040533727.1
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(538446..538992,541915..542044,544409..544482,545632..545733,550993..551121,551878..552000,553459..553532,554568..554757,555125..555210,555664..555780,556735..556890,557195..557264,557386..557443,558085..558227,558694..558823,559618..559875)
location: region:538446-559875:1
so has part: feature:538446-538992:1:exon
so has part: feature:541915-542044:1:exon
so has part: feature:544409-544482:1:exon
so has part: feature:545632-545733:1:exon
so has part: feature:550993-551121:1:exon
so has part: feature:551878-552000:1:exon
so has part: feature:553459-553532:1:exon
so has part: feature:554568-554757:1:exon
so has part: feature:555125-555210:1:exon
so has part: feature:555664-555780:1:exon
so has part: feature:556735-556890:1:exon
so has part: feature:557195-557264:1:exon
so has part: feature:557386-557443:1:exon
so has part: feature:558085-558227:1:exon
so has part: feature:558694-558823:1:exon
so has part: feature:559618-559875:1:exon

position:538446:1
position: 538446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538446-538992:1:exon

position:538992:1
position: 538992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541915-542044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544409-544482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545632-545733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550993-551121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551878-552000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553459-553532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554568-554757:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555125-555210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555664-555780:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556735-556890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:557195-557264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:557386-557443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:558085-558227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:558694-558823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:559618-559875:1:exon

DNAJC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DNAJC11
product: DnaJ heat shock protein family (Hsp40) member C11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040533730.1
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(538654..538819,541915..542044,544409..544482,545632..545733,550993..551121,551878..552000,553459..553532,554568..554757,555125..555210,555664..555780,556735..556890,557195..557264,557386..557443,558085..558227,558694..558823,559618..559875)
location: region:538654-559875:1
so has part: feature:538654-538819:1:exon
so has part: feature:541915-542044:1:exon
so has part: feature:544409-544482:1:exon
so has part: feature:545632-545733:1:exon
so has part: feature:550993-551121:1:exon
so has part: feature:551878-552000:1:exon
so has part: feature:553459-553532:1:exon
so has part: feature:554568-554757:1:exon
so has part: feature:555125-555210:1:exon
so has part: feature:555664-555780:1:exon
so has part: feature:556735-556890:1:exon
so has part: feature:557195-557264:1:exon
so has part: feature:557386-557443:1:exon
so has part: feature:558085-558227:1:exon
so has part: feature:558694-558823:1:exon
so has part: feature:559618-559875:1:exon

position:538654:1
position: 538654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538654-538819:1:exon

position:538819:1
position: 538819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541915-542044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544409-544482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545632-545733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550993-551121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551878-552000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553459-553532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554568-554757:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555125-555210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555664-555780:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556735-556890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:557195-557264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:557386-557443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:558085-558227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:558694-558823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:559618-559875:1:exon

DNAJC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNAJC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 11 isoform X1
translation: MREDRKECREHELRTAKKGFFSAPFLVAVILQSIWCFTNRNGTAGPRIVFQHTGQCRKVKDEASQEELKAAYRRLCMLYHPDKHRDPELKTQAERLFNLVHQAYEVLSDPQTRAIYDIYGRRGLEMEGWEVVERKRTPAEIREEFERLQREREERRLQQRTNPKGTISVGIDATDLFDRYDEEYEDVQGSSFPQIEINKMHISQSIEAPLTATDTAILSGNLSTQNGNGGGSINLALRRVTSAKGWGELEFGAGDLQGPLFGLKIFRNLTPRCFITTNCALQFSSRGIRPGLTTVLARNLDKNTMGYLQWRWGIQSAMNTSVVRDTKTSHFTVALQLGIPHSFMMVSYQHKFQDEDQTRVKGSLKAGFFGTIVEYGAERKISRHSILGATVSVGVPQGVSLKIKLNRASQTYFFPVHLTDQLLPSAVFYATVGPLVIYFAMHRLIIKPYLRAQKERELEKQRESTASDILQKKQEAEAAVRLMQESVRRIIEAEEARMGLIVVNAWYGKFVNDNSRKNEKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKSLKVLYQFRGVLHQVMSADNEALRIPKQSHRIDADG
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(538807..538992,541915..542044,544409..544482,545632..545733,550993..551121,551878..552000,553459..553532,554568..554757,555125..555210,555664..555780,556735..556890,557195..557264,557386..557443,558085..558227,558694..558823,559618..559643)
location: region:538807-559643:1
so has part: feature:538807-538992:1:exon
so has part: feature:541915-542044:1:exon
so has part: feature:544409-544482:1:exon
so has part: feature:545632-545733:1:exon
so has part: feature:550993-551121:1:exon
so has part: feature:551878-552000:1:exon
so has part: feature:553459-553532:1:exon
so has part: feature:554568-554757:1:exon
so has part: feature:555125-555210:1:exon
so has part: feature:555664-555780:1:exon
so has part: feature:556735-556890:1:exon
so has part: feature:557195-557264:1:exon
so has part: feature:557386-557443:1:exon
so has part: feature:558085-558227:1:exon
so has part: feature:558694-558823:1:exon
so has part: feature:559618-559643:1:exon

XP_040389661.1
type: Protein
SIO_000068: ncbiprotein

position:538807:1
position: 538807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538807-538992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541915-542044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544409-544482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545632-545733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550993-551121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551878-552000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553459-553532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554568-554757:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555125-555210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555664-555780:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556735-556890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:557195-557264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:557386-557443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:558085-558227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:558694-558823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:559618-559643:1:exon

DNAJC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DNAJC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 11 isoform X3
translation: MLYHPDKHRDPELKTQAERLFNLVHQAYEVLSDPQTRAIYDIYGRRGLEMEGWEVVERKRTPAEIREEFERLQREREERRLQQRTNPKGTISVGIDATDLFDRYDEEYEDVQGSSFPQIEINKMHISQSIEAPLTATDTAILSGNLSTQNGNGGGSINLALRRVTSAKGWGELEFGAGDLQGPLFGLKIFRNLTPRCFITTNCALQFSSRGIRPGLTTVLARNLDKNTMGYLQWRWGIQSAMNTSVVRDTKTSHFTVALQLGIPHSFMMVSYQHKFQDEDQTRVKGSLKAGFFGTIVEYGAERKISRHSILGATVSVGVPQGVSLKIKLNRASQTYFFPVHLTDQLLPSAVFYATVGPLVIYFAMHRLIIKPYLRAQKERELEKQRESTASDILQKKQEAEAAVRLMQESVRRIIEAEEARMGLIVVNAWYGKFVNDNSRKNEKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKSLKVLYQFRGVLHQVMSADNEALRIPKQSHRIDADG
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(541957..542044,544409..544482,545632..545733,550993..551121,551878..552000,553459..553532,554568..554757,555125..555210,555664..555780,556735..556890,557195..557264,557386..557443,558085..558227,558694..558823,559618..559643)
location: region:541957-559643:1
so has part: feature:541957-542044:1:exon
so has part: feature:544409-544482:1:exon
so has part: feature:545632-545733:1:exon
so has part: feature:550993-551121:1:exon
so has part: feature:551878-552000:1:exon
so has part: feature:553459-553532:1:exon
so has part: feature:554568-554757:1:exon
so has part: feature:555125-555210:1:exon
so has part: feature:555664-555780:1:exon
so has part: feature:556735-556890:1:exon
so has part: feature:557195-557264:1:exon
so has part: feature:557386-557443:1:exon
so has part: feature:558085-558227:1:exon
so has part: feature:558694-558823:1:exon
so has part: feature:559618-559643:1:exon

XP_040389664.1
type: Protein
SIO_000068: ncbiprotein

position:541957:1
position: 541957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541957-542044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544409-544482:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545632-545733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550993-551121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551878-552000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:553459-553532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554568-554757:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555125-555210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555664-555780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556735-556890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:557195-557264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:557386-557443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:558085-558227:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:558694-558823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:559618-559643:1:exon

PHF13
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PHF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(563817..568661)
location: region:563817-568661:-1
so has part: feature:563817-568661:-1:exon
subclass of: SO_0000010

121058331
type: Gene
SIO_000068: ncbigene

position:563817:-1
position: 563817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568661:-1
position: 568661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563817-568661:-1:exon

PHF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PHF13
product: PHD finger protein 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040533731.1
SIO_010081: PHF13
subclass of: SO_0000673
so part of: PHF13
location: complement(join(563817..566401,566806..567358,567654..567755,568489..568661))
location: region:563817-568661:-1
so has part: feature:568489-568661:-1:exon
so has part: feature:567654-567755:-1:exon
so has part: feature:566806-567358:-1:exon
so has part: feature:563817-566401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568489-568661:-1:exon

position:568489:-1
position: 568489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:567654-567755:-1:exon

position:567654:-1
position: 567654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567755:-1
position: 567755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:566806-567358:-1:exon

position:566806:-1
position: 566806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567358:-1
position: 567358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:563817-566401:-1:exon

position:566401:-1
position: 566401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PHF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 13
translation: MDSDSCASPFAPEDFSPASRRHRTVEDFNKFCTFVLAYAGYIPYPQEETPLRNSPSPPNSTGGTIDSDSWDPRFNDVPSSVSLPAKNRKNFSQLKRAKPYGSLFQRAKPGGFLPERKQVDKIRKKKKLKRREMEVSAEEDYEEKLLELEAEDSFVETPMSPSSEGDPQSVTEHSSVWDSDTPSSVSYPAVTAEQTVEIQSVGKRTVIRQGKQVVFRDEDGTGDDEDIMVDSDDDSWDLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVYICQKCRDSKFDIRRSNRSRTGSRRRFLD
SIO_010081: PHF13
subclass of: SO_0000673
so part of: PHF13
location: complement(join(566175..566401,566806..567358,567654..567755,568489..568527))
location: region:566175-568527:-1
so has part: feature:568489-568527:-1:exon
so has part: feature:567654-567755:-1:exon
so has part: feature:566806-567358:-1:exon
so has part: feature:566175-566401:-1:exon

XP_040389665.1
type: Protein
SIO_000068: ncbiprotein

position:566175:-1
position: 566175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568527:-1
position: 568527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568489-568527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567654-567755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:566806-567358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566175-566401:-1:exon

KLHL21
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: KLHL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 568773..578556
location: region:568773-578556:1
so has part: feature:568773-578556:1:exon
subclass of: SO_0000010

121058333
type: Gene
SIO_000068: ncbigene

position:568773:1
position: 568773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578556:1
position: 578556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568773-578556:1:exon

KLHL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KLHL21
product: kelch like family member 21, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040533734.1
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(568773..568820,569879..570979,572877..573282,575121..575193,575503..578556)
location: region:568773-578556:1
so has part: feature:568773-568820:1:exon
so has part: feature:569879-570979:1:exon
so has part: feature:572877-573282:1:exon
so has part: feature:575121-575193:1:exon
so has part: feature:575503-578556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568773-568820:1:exon

position:568820:1
position: 568820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569879-570979:1:exon

position:569879:1
position: 569879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570979:1
position: 570979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:572877-573282:1:exon

position:572877:1
position: 572877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573282:1
position: 573282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:575121-575193:1:exon

position:575121:1
position: 575121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575193:1
position: 575193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:575503-578556:1:exon

position:575503:1
position: 575503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KLHL21
product: kelch like family member 21, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040533735.1
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(568961..569058,569879..570979,572877..573282,575121..575193,575503..578556)
location: region:568961-578556:1
so has part: feature:568961-569058:1:exon
so has part: feature:569879-570979:1:exon
so has part: feature:572877-573282:1:exon
so has part: feature:575121-575193:1:exon
so has part: feature:575503-578556:1:exon

position:568961:1
position: 568961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568961-569058:1:exon

position:569058:1
position: 569058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569879-570979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572877-573282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575121-575193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575503-578556:1:exon

KLHL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KLHL21
product: kelch like family member 21, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533736.1
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(569366..570979,572877..573282,575121..575193,575503..578556)
location: region:569366-578556:1
so has part: feature:569366-570979:1:exon
so has part: feature:572877-573282:1:exon
so has part: feature:575121-575193:1:exon
so has part: feature:575503-578556:1:exon

position:569366:1
position: 569366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569366-570979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572877-573282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575121-575193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575503-578556:1:exon

KLHL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KLHL21
product: kelch like family member 21, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533737.1
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(569466..569702,569879..570979,572877..573282,575121..575193,575503..578556)
location: region:569466-578556:1
so has part: feature:569466-569702:1:exon
so has part: feature:569879-570979:1:exon
so has part: feature:572877-573282:1:exon
so has part: feature:575121-575193:1:exon
so has part: feature:575503-578556:1:exon

position:569466:1
position: 569466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569466-569702:1:exon

position:569702:1
position: 569702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569879-570979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572877-573282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575121-575193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575503-578556:1:exon

KLHL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KLHL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 21 isoform X2
translation: MGKENVCRGCLVYPVSRAEDVSPCANPPVWFFLLLQAALRVDRGAPYRLWRSASSSRQGMAASTGSGGTAAAAAATGEPAHAVSLLRGLSALRAERSLLDVTVVAGGREFGAHRAVLAAASGYFRAMFGGALREARAERVRLHGVEPECLARLLDFAYTGRVGGLGPDIAERLLRAADLLQFPAVKEACGAWLARQLEPANALDMQDFAEAFACPALAAAAHRFVLRHVSELGAQLERLPLPRLLSYLRDDGLCIPKEEAAFQLALRWVRADPAARAPLLPQLLAHVRLPFVRRFYLLAHVEGEPLVARCPPCLRLLREARDFQAARLDRHDRGPCARMRPRPSTGLAEILVLVGGCDRDCDELVTVDCYNPRTGHWRYLAEFPEHLGGGYSVAALGNDIYVTGGSDGSRLYDCVWRYNSSVNEWTEVSPMLKAREYHSSTVLDGLLYVIASDSTERYDHSVDSWEALQPMLYPMDNCSTTSCRGKLFAIGSLSGKESMVMQCYDPDSDLWSLVNCGHLPPWSFAPKTVTLNGLMYFIRDDSAEVDVYNPVKNEWDKIPAMLQVHVGGSVAVLGGKLYVSGGYDNTFELSDVLEAYDPETRTWSVVGRLPEPIFWHGSVSIFRQFMPETTQEDDSITLDNTINLNRQRQNLHNQNLNELR
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(569770..570979,572877..573282,575121..575193,575503..575796)
location: region:569770-575796:1
so has part: feature:569770-570979:1:exon
so has part: feature:572877-573282:1:exon
so has part: feature:575121-575193:1:exon
so has part: feature:575503-575796:1:exon

XP_040389670.1
type: Protein
SIO_000068: ncbiprotein

position:569770:1
position: 569770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575796:1
position: 575796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569770-570979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572877-573282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575121-575193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575503-575796:1:exon

KLHL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KLHL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 21 isoform X1
translation: MAASTGSGGTAAAAAATGEPAHAVSLLRGLSALRAERSLLDVTVVAGGREFGAHRAVLAAASGYFRAMFGGALREARAERVRLHGVEPECLARLLDFAYTGRVGGLGPDIAERLLRAADLLQFPAVKEACGAWLARQLEPANALDMQDFAEAFACPALAAAAHRFVLRHVSELGAQLERLPLPRLLSYLRDDGLCIPKEEAAFQLALRWVRADPAARAPLLPQLLAHVRLPFVRRFYLLAHVEGEPLVARCPPCLRLLREARDFQAARLDRHDRGPCARMRPRPSTGLAEILVLVGGCDRDCDELVTVDCYNPRTGHWRYLAEFPEHLGGGYSVAALGNDIYVTGGSDGSRLYDCVWRYNSSVNEWTEVSPMLKAREYHSSTVLDGLLYVIASDSTERYDHSVDSWEALQPMLYPMDNCSTTSCRGKLFAIGSLSGKESMVMQCYDPDSDLWSLVNCGHLPPWSFAPKTVTLNGLMYFIRDDSAEVDVYNPVKNEWDKIPAMLQVHVGGSVAVLGGKLYVSGGYDNTFELSDVLEAYDPETRTWSVVGRLPEPIFWHGSVSIFRQFMPETTQEDDSITLDNTINLNRQRQNLHNQNLNELR
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(569947..570979,572877..573282,575121..575193,575503..575796)
location: region:569947-575796:1
so has part: feature:569947-570979:1:exon
so has part: feature:572877-573282:1:exon
so has part: feature:575121-575193:1:exon
so has part: feature:575503-575796:1:exon

XP_040389668.1
type: Protein
SIO_000068: ncbiprotein

position:569947:1
position: 569947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569947-570979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572877-573282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575121-575193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575503-575796:1:exon

KLHL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KLHL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 21 isoform X1
translation: MAASTGSGGTAAAAAATGEPAHAVSLLRGLSALRAERSLLDVTVVAGGREFGAHRAVLAAASGYFRAMFGGALREARAERVRLHGVEPECLARLLDFAYTGRVGGLGPDIAERLLRAADLLQFPAVKEACGAWLARQLEPANALDMQDFAEAFACPALAAAAHRFVLRHVSELGAQLERLPLPRLLSYLRDDGLCIPKEEAAFQLALRWVRADPAARAPLLPQLLAHVRLPFVRRFYLLAHVEGEPLVARCPPCLRLLREARDFQAARLDRHDRGPCARMRPRPSTGLAEILVLVGGCDRDCDELVTVDCYNPRTGHWRYLAEFPEHLGGGYSVAALGNDIYVTGGSDGSRLYDCVWRYNSSVNEWTEVSPMLKAREYHSSTVLDGLLYVIASDSTERYDHSVDSWEALQPMLYPMDNCSTTSCRGKLFAIGSLSGKESMVMQCYDPDSDLWSLVNCGHLPPWSFAPKTVTLNGLMYFIRDDSAEVDVYNPVKNEWDKIPAMLQVHVGGSVAVLGGKLYVSGGYDNTFELSDVLEAYDPETRTWSVVGRLPEPIFWHGSVSIFRQFMPETTQEDDSITLDNTINLNRQRQNLHNQNLNELR
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(569947..570979,572877..573282,575121..575193,575503..575796)
location: region:569947-575796:1
so has part: feature:569947-570979:1:exon
so has part: feature:572877-573282:1:exon
so has part: feature:575121-575193:1:exon
so has part: feature:575503-575796:1:exon

XP_040389669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569947-570979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572877-573282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575121-575193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575503-575796:1:exon

KLHL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KLHL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 21 isoform X1
translation: MAASTGSGGTAAAAAATGEPAHAVSLLRGLSALRAERSLLDVTVVAGGREFGAHRAVLAAASGYFRAMFGGALREARAERVRLHGVEPECLARLLDFAYTGRVGGLGPDIAERLLRAADLLQFPAVKEACGAWLARQLEPANALDMQDFAEAFACPALAAAAHRFVLRHVSELGAQLERLPLPRLLSYLRDDGLCIPKEEAAFQLALRWVRADPAARAPLLPQLLAHVRLPFVRRFYLLAHVEGEPLVARCPPCLRLLREARDFQAARLDRHDRGPCARMRPRPSTGLAEILVLVGGCDRDCDELVTVDCYNPRTGHWRYLAEFPEHLGGGYSVAALGNDIYVTGGSDGSRLYDCVWRYNSSVNEWTEVSPMLKAREYHSSTVLDGLLYVIASDSTERYDHSVDSWEALQPMLYPMDNCSTTSCRGKLFAIGSLSGKESMVMQCYDPDSDLWSLVNCGHLPPWSFAPKTVTLNGLMYFIRDDSAEVDVYNPVKNEWDKIPAMLQVHVGGSVAVLGGKLYVSGGYDNTFELSDVLEAYDPETRTWSVVGRLPEPIFWHGSVSIFRQFMPETTQEDDSITLDNTINLNRQRQNLHNQNLNELR
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(569947..570979,572877..573282,575121..575193,575503..575796)
location: region:569947-575796:1
so has part: feature:569947-570979:1:exon
so has part: feature:572877-573282:1:exon
so has part: feature:575121-575193:1:exon
so has part: feature:575503-575796:1:exon

XP_040389671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:569947-570979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572877-573282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575121-575193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575503-575796:1:exon

ZBTB48
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ZBTB48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(576615..585349)
location: region:576615-585349:-1
so has part: feature:576615-585349:-1:exon
subclass of: SO_0000010

121058332
type: Gene
SIO_000068: ncbigene

position:576615:-1
position: 576615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585349:-1
position: 585349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576615-585349:-1:exon

ZBTB48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZBTB48
product: zinc finger and BTB domain containing 48, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533732.1
SIO_010081: ZBTB48
subclass of: SO_0000673
so part of: ZBTB48
location: complement(join(576615..579799,580141..580229,580413..580656,581012..581148,581774..581891,582411..582497,582966..583058,583538..583649,584596..585349))
location: region:576615-585349:-1
so has part: feature:584596-585349:-1:exon
so has part: feature:583538-583649:-1:exon
so has part: feature:582966-583058:-1:exon
so has part: feature:582411-582497:-1:exon
so has part: feature:581774-581891:-1:exon
so has part: feature:581012-581148:-1:exon
so has part: feature:580413-580656:-1:exon
so has part: feature:580141-580229:-1:exon
so has part: feature:576615-579799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584596-585349:-1:exon

position:584596:-1
position: 584596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:583538-583649:-1:exon

position:583538:-1
position: 583538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583649:-1
position: 583649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:582966-583058:-1:exon

position:582966:-1
position: 582966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583058:-1
position: 583058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:582411-582497:-1:exon

position:582411:-1
position: 582411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582497:-1
position: 582497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:581774-581891:-1:exon

position:581774:-1
position: 581774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581891:-1
position: 581891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:581012-581148:-1:exon

position:581012:-1
position: 581012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581148:-1
position: 581148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:580413-580656:-1:exon

position:580413:-1
position: 580413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580656:-1
position: 580656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:580141-580229:-1:exon

position:580141:-1
position: 580141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580229:-1
position: 580229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:576615-579799:-1:exon

position:579799:-1
position: 579799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZBTB48
product: zinc finger and BTB domain containing 48, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533733.1
SIO_010081: ZBTB48
subclass of: SO_0000673
so part of: ZBTB48
location: complement(join(576615..579799,580141..580229,580413..580577,581012..581148,581774..581928,582411..582497,582966..583058,583538..583649,584596..585349))
location: region:576615-585349:-1
so has part: feature:584596-585349:-1:exon
so has part: feature:583538-583649:-1:exon
so has part: feature:582966-583058:-1:exon
so has part: feature:582411-582497:-1:exon
so has part: feature:581774-581928:-1:exon
so has part: feature:581012-581148:-1:exon
so has part: feature:580413-580577:-1:exon
so has part: feature:580141-580229:-1:exon
so has part: feature:576615-579799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584596-585349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583538-583649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:582966-583058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582411-582497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:581774-581928:-1:exon

position:581928:-1
position: 581928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:581012-581148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:580413-580577:-1:exon

position:580577:-1
position: 580577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:580141-580229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576615-579799:-1:exon

ZBTB48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZBTB48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere zinc finger-associated protein isoform X1
translation: MAGAAAAHSVRVLRELNRQRAAGQFCDATLGVGGRQFRAHWPVLASCSRFFRGVGGGGGAGPVPLPEGLADTFQLLLDFFYTGRLALTAHNRARLLAAAEQLGVPDAVALCRAFRPAADRHRPRRAPGAAPRRADGAAAAPPEPGGEAVREGAAGSGAAAGGALTAAVPPQASPAAAAAAAGGGQGRGGGEALPGRKAPRGKKKPPAGAAAAAVPEAGLAGSGKGTAAPAECPTCHKTFLSKYYLKVHNRKHTGEKPFECSKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQEVFKRRMELRLHMVSHTGEMPYKCSSCAQQFMQKKDLQSHMIKLHGAPKPHASYVCTRRSSTGERSCLSVRSADTEPQVATACRCTSRPSTGTSAPMFVSSAITPSHRKPTSTCTCARTPVRSPSSATSAARPSGHKCSLRLCLDGDTQWTADLQLSLPLLTAASLDKHNRTHTGERPFSCEFCDQRFTEKGPLLRHIASRHQEGRPHFCQICGKTFKAIEQLRVHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVENYNPRQRKLRNLIIEDEKAVVVALQPPQELEVGSAEVIVESLSHGSLPEEIPVQRLCSNENFSTADVIEQSLIITTAIPDDCET
SIO_010081: ZBTB48
subclass of: SO_0000673
so part of: ZBTB48
location: complement(join(579503..579799,580141..580229,580413..580656,581012..581148,581774..581891,582411..582497,582966..583058,583538..583649,584596..585344))
location: region:579503-585344:-1
so has part: feature:584596-585344:-1:exon
so has part: feature:583538-583649:-1:exon
so has part: feature:582966-583058:-1:exon
so has part: feature:582411-582497:-1:exon
so has part: feature:581774-581891:-1:exon
so has part: feature:581012-581148:-1:exon
so has part: feature:580413-580656:-1:exon
so has part: feature:580141-580229:-1:exon
so has part: feature:579503-579799:-1:exon

XP_040389666.1
type: Protein
SIO_000068: ncbiprotein

position:579503:-1
position: 579503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585344:-1
position: 585344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584596-585344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583538-583649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:582966-583058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582411-582497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:581774-581891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581012-581148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:580413-580656:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:580141-580229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579503-579799:-1:exon

ZBTB48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZBTB48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere zinc finger-associated protein isoform X2
translation: MAGAAAAHSVRVLRELNRQRAAGQFCDATLGVGGRQFRAHWPVLASCSRFFRGVGGGGGAGPVPLPEGLADTFQLLLDFFYTGRLALTAHNRARLLAAAEQLGVPDAVALCRAFRPAADRHRPRRAPGAAPRRADGAAAAPPEPGGEAVREGAAGSGAAAGGALTAAVPPQASPAAAAAAAGGGQGRGGGEALPGRKAPRGKKKPPAGAAAAAVPEAGLAGSGKGTAAPAECPTCHKTFLSKYYLKVHNRKHTGEKPFECSKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQEVFKRRMELRLHMVSHTGEMPYKCSSCAQQFMQKKDLQSHMIKLHGAPKPHACSTCSKCFLSRTELRLHEAFKHRGEKLFVCEECGHRASSRNGLQMHIKAKHRNERPYVCEFCHHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASLDKHNRTHTGERPFSCEFCDQRFTEKGPLLRHIASRHQEGRPHFCQICGKTFKAIEQLRVHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVENYNPRQRKLRNLIIEDEKAVVVALQPPQELEVGSAEVIVESLSHGSLPEEIPVQRLCSNENFSTADVIEQSLIITTAIPDDCET
SIO_010081: ZBTB48
subclass of: SO_0000673
so part of: ZBTB48
location: complement(join(579503..579799,580141..580229,580413..580577,581012..581148,581774..581928,582411..582497,582966..583058,583538..583649,584596..585344))
location: region:579503-585344:-1
so has part: feature:584596-585344:-1:exon
so has part: feature:583538-583649:-1:exon
so has part: feature:582966-583058:-1:exon
so has part: feature:582411-582497:-1:exon
so has part: feature:581774-581928:-1:exon
so has part: feature:581012-581148:-1:exon
so has part: feature:580413-580577:-1:exon
so has part: feature:580141-580229:-1:exon
so has part: feature:579503-579799:-1:exon

XP_040389667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584596-585344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583538-583649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:582966-583058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582411-582497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:581774-581928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581012-581148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:580413-580577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:580141-580229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579503-579799:-1:exon

TAS1R1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TAS1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(585448..590644)
location: region:585448-590644:-1
so has part: feature:585448-590644:-1:exon
subclass of: SO_0000010

121058267
type: Gene
SIO_000068: ncbigene

position:585448:-1
position: 585448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590644:-1
position: 590644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585448-590644:-1:exon

TAS1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TAS1R1
product: taste 1 receptor member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040533619.1
SIO_010081: TAS1R1
subclass of: SO_0000673
so part of: TAS1R1
location: complement(join(585448..586803,587952..588164,588742..589530,589949..590255,590471..590644))
location: region:585448-590644:-1
so has part: feature:590471-590644:-1:exon
so has part: feature:589949-590255:-1:exon
so has part: feature:588742-589530:-1:exon
so has part: feature:587952-588164:-1:exon
so has part: feature:585448-586803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590471-590644:-1:exon

position:590471:-1
position: 590471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589949-590255:-1:exon

position:589949:-1
position: 589949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590255:-1
position: 590255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:588742-589530:-1:exon

position:588742:-1
position: 588742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589530:-1
position: 589530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:587952-588164:-1:exon

position:587952:-1
position: 587952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588164:-1
position: 588164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:585448-586803:-1:exon

position:586803:-1
position: 586803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAS1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TAS1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: taste receptor type 1 member 1
translation: MRPPVLLCLGACLSAAAAAFFSRDGDYRLAGLFQLHGLAPRAAARPLVDDCDDAAAFKSHGYQLFQTMRFTLEEINNSSSLLPNVTLGYEIYDTCSESANIYATLHALVQKGRHDIEMLHAFQHYEPTVVAVIGPDSTQLALTTAAILGVFLVPEISYEASLEKLSLKRFYPSFLRTIPSDRQQVKAIALLLQSFRWTWVALLGSDNAYGRDGLNALYDLLVASDVCVAYRGIIPTNKDASSPELHRLVGILMDIRVNVTVVFSNINSARPFFEVVVQKNITGMVWVASEDWSLAQNIWQVPGIQNTGSVIGMSVEQAESTMLERLESWKYAEERAASESAGSTGAGGENRSSSSESTWPNCTQQCPGCHLLAMAPNIYDTQASNNVYSAVYAVAHGLHDLLGCASGVCSKDRVYPWQLLQKIKQVNFSLHNSQICFDANGNIHKGYDIIMWNWSGLSWAFDVVGTFTVNPDRLLLNRSKILWHTKDHQQKWPALTNSGSRESLKTPICIPHPVARPAGELLQTLPCLGRSLLRAGAPSPPAARAPLSLVPPGSGLLGSPLGELLGKEPSLLLQAQKHLRGRSGTRGEGSSSRQPGVRGTVRSGRSPRAGHLPGPAARSAAQPLSGRVSPPDLYACQACGADEWSPASSEVCFNRTVEFLSWAEPLSWALLTPVALLLLLLAALAALFARHASTPVVRAAGGRLCFLMLGSLACACGSLFCYFGAPTRPCCLLRLPLFAVSFAVFLSSVATRCLRLVAIFKLRGRCPRLRRACLRRGAPALLIAAGAAAQASLCLAAAVTAPPGPRGRREAAAERPALECGGGGAAGAAAAAFNVALSGGCFALSYAGKDLPAGYNEARCLTCGLLLHLACAAAALCTQGAFRGRSAAAAAVLGALGTLAPPLAGYFVPRALALLLRPRLNTAAHFRGAIGSYARRRAAR
SIO_010081: TAS1R1
subclass of: SO_0000673
so part of: TAS1R1
location: complement(join(585448..586803,587952..588164,588742..589530,589949..590255,590471..590628))
location: region:585448-590628:-1
so has part: feature:590471-590628:-1:exon
so has part: feature:589949-590255:-1:exon
so has part: feature:588742-589530:-1:exon
so has part: feature:587952-588164:-1:exon
so has part: feature:585448-586803:-1:exon

XP_040389553.1
type: Protein
SIO_000068: ncbiprotein

position:590628:-1
position: 590628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590471-590628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589949-590255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588742-589530:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587952-588164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585448-586803:-1:exon

NOL9
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NOL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 590743..597958
location: region:590743-597958:1
so has part: feature:590743-597958:1:exon
subclass of: SO_0000010

121058438
type: Gene
SIO_000068: ncbigene

position:590743:1
position: 590743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597958:1
position: 597958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590743-597958:1:exon

NOL9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NOL9
product: nucleolar protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533992.1
SIO_010081: NOL9
subclass of: SO_0000673
so part of: NOL9
location: join(590743..590949,591021..591246,591486..591613,591858..591996,592558..592654,593402..593499,594276..594437,594620..594908,595801..595912,596257..596434,597174..597307,597629..597958)
location: region:590743-597958:1
so has part: feature:590743-590949:1:exon
so has part: feature:591021-591246:1:exon
so has part: feature:591486-591613:1:exon
so has part: feature:591858-591996:1:exon
so has part: feature:592558-592654:1:exon
so has part: feature:593402-593499:1:exon
so has part: feature:594276-594437:1:exon
so has part: feature:594620-594908:1:exon
so has part: feature:595801-595912:1:exon
so has part: feature:596257-596434:1:exon
so has part: feature:597174-597307:1:exon
so has part: feature:597629-597958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590743-590949:1:exon

position:590949:1
position: 590949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591021-591246:1:exon

position:591021:1
position: 591021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591246:1
position: 591246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591486-591613:1:exon

position:591486:1
position: 591486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591613:1
position: 591613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:591858-591996:1:exon

position:591858:1
position: 591858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591996:1
position: 591996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592558-592654:1:exon

position:592558:1
position: 592558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592654:1
position: 592654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:593402-593499:1:exon

position:593402:1
position: 593402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593499:1
position: 593499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:594276-594437:1:exon

position:594276:1
position: 594276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594437:1
position: 594437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:594620-594908:1:exon

position:594620:1
position: 594620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594908:1
position: 594908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:595801-595912:1:exon

position:595801:1
position: 595801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595912:1
position: 595912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:596257-596434:1:exon

position:596257:1
position: 596257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596434:1
position: 596434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:597174-597307:1:exon

position:597174:1
position: 597174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597307:1
position: 597307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:597629-597958:1:exon

position:597629:1
position: 597629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOL9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NOL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polynucleotide 5'-hydroxyl-kinase NOL9
translation: MPARRGPPARRPRRATARTAAARGGRSEAAWREFAASFVRAGMVPPADAGLAAVEAAEGAAVLLLAPQQALTFTGKCRLSCLYGAVRVLGFAIGSHQPGLPVFSPPTHCALALEALPAARPPAADPRQLRAAARAAMRAHRVRRQARVKVMARFSPECAVVLLEHLDTPVTRFLLSLPPLSRLFEAQKKEESSFTTEDAVLASVGIVKCSPDNGLLVSESMFLALEELIQACCAEDEGVPIIMVCGPKSIGKSTFNRYLINLLLNHLPSVEYMECDIGQTEFTPPGCVSLSNVTEPFLGPPFTHQQTPRKMVYYGQTSCEQDTERYIDVVKYVFNSYKKEVPLVINTMGWVKGEGLLLLTDMIRLLSPTHIVQMDVYDWKAMAPLTPEYVHLAPGLYTKGKQQAKSKQMNLSAAESWKSSEGEEDASVPDYKLLYIHPEFPRAGVAGEARVHSSILRDMSILGYLGQLQPPDIGSVLPLHSFVPYQVPFNAVALRVIHTDVAPTNIMYAVNASWVGLCRIPDEIRCQTDGPVLLTQTPVCDCLGFGIVRGVEMEKKLYHVLTPVPPENLRLVNCLLLGNIAIPNCVLVSQEGIEGEIPYVTSEYNYNILGSGKLKKKKRFKKREYTYQCDYT
SIO_010081: NOL9
subclass of: SO_0000673
so part of: NOL9
location: join(590743..590949,591021..591246,591486..591613,591858..591996,592558..592654,593402..593499,594276..594437,594620..594908,595801..595912,596257..596434,597174..597307,597629..597757)
location: region:590743-597757:1
so has part: feature:590743-590949:1:exon
so has part: feature:591021-591246:1:exon
so has part: feature:591486-591613:1:exon
so has part: feature:591858-591996:1:exon
so has part: feature:592558-592654:1:exon
so has part: feature:593402-593499:1:exon
so has part: feature:594276-594437:1:exon
so has part: feature:594620-594908:1:exon
so has part: feature:595801-595912:1:exon
so has part: feature:596257-596434:1:exon
so has part: feature:597174-597307:1:exon
so has part: feature:597629-597757:1:exon

XP_040389926.1
type: Protein
SIO_000068: ncbiprotein

position:597757:1
position: 597757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590743-590949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591021-591246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591486-591613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591858-591996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592558-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593402-593499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:594276-594437:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:594620-594908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:595801-595912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:596257-596434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597174-597307:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:597629-597757:1:exon

PLEKHG5
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PLEKHG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 599065..617370
location: region:599065-617370:1
so has part: feature:599065-617370:1:exon
subclass of: SO_0000010

121058335
type: Gene
SIO_000068: ncbigene

position:599065:1
position: 599065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617370:1
position: 617370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599065-617370:1:exon

PLEKHG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PLEKHG5
product: pleckstrin homology and RhoGEF domain containing G5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040533741.1
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(599065..599203,606069..606145,609845..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..617370)
location: region:599065-617370:1
so has part: feature:599065-599203:1:exon
so has part: feature:606069-606145:1:exon
so has part: feature:609845-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-617370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599065-599203:1:exon

position:599203:1
position: 599203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606069-606145:1:exon

position:606069:1
position: 606069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606145:1
position: 606145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609845-609974:1:exon

position:609845:1
position: 609845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609974:1
position: 609974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:610093-610195:1:exon

position:610093:1
position: 610093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610195:1
position: 610195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:610322-610382:1:exon

position:610322:1
position: 610322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610382:1
position: 610382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:610501-610592:1:exon

position:610501:1
position: 610501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610592:1
position: 610592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:610670-610806:1:exon

position:610670:1
position: 610670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610806:1
position: 610806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:610882-611030:1:exon

position:610882:1
position: 610882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611030:1
position: 611030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:612837-613022:1:exon

position:612837:1
position: 612837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613022:1
position: 613022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:613195-613365:1:exon

position:613195:1
position: 613195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613365:1
position: 613365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:613440-613535:1:exon

position:613440:1
position: 613440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613535:1
position: 613535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:613627-613677:1:exon

position:613627:1
position: 613627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613677:1
position: 613677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:613868-614017:1:exon

position:613868:1
position: 613868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614017:1
position: 614017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:614095-614205:1:exon

position:614095:1
position: 614095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614205:1
position: 614205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:614272-614421:1:exon

position:614272:1
position: 614272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614421:1
position: 614421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:614506-614643:1:exon

position:614506:1
position: 614506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614643:1
position: 614643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:614726-614845:1:exon

position:614726:1
position: 614726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614845:1
position: 614845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:614921-615053:1:exon

position:614921:1
position: 614921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615053:1
position: 615053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:615165-615280:1:exon

position:615165:1
position: 615165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615280:1
position: 615280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:615354-615523:1:exon

position:615354:1
position: 615354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615523:1
position: 615523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:615599-616381:1:exon

position:615599:1
position: 615599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616381:1
position: 616381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:616463-617370:1:exon

position:616463:1
position: 616463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PLEKHG5
product: pleckstrin homology and RhoGEF domain containing G5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533739.1
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(599474..599648,606069..606145,609845..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..617370)
location: region:599474-617370:1
so has part: feature:599474-599648:1:exon
so has part: feature:606069-606145:1:exon
so has part: feature:609845-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-617370:1:exon

position:599474:1
position: 599474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599474-599648:1:exon

position:599648:1
position: 599648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606069-606145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609845-609974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:616463-617370:1:exon

PLEKHG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PLEKHG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family G member 5 isoform X2
translation: MSSAAAKRGSPPRSWLNLRRATHERCPAEEQGLHCQHPDCTDKRRAAKVCHHAECQQLNHSSPLSLCEVCDGRLHGAMHFDGHIRFDLPPQGSILARNVSTRSCPPRTSPASDVEEDDEGPADGRGDRKSSALKLPKKKARRRHTDDPSKECFTLKFDLNVDIEAEIVPAMKKKSLGEVLLPVFERKAIEQSKVDIYLDQSNTPLSLHFEAYRFGGHYLRVKAKPGDELKVEQAARDARSASLPILRPAGTAALFGPVLEPVLGRREGAEVLAPGRRRKNMTEFLGDASIPGPELSPHGSGSLPTNGTDTWKNRAASRFSGFFSSGAGTGPFGREVDKMEQLESKLHTYSSFGLPKLPPQLRFDQDSWEEDGDDSSLALEDSWQQIIEGTEALTRRQCHQQEAIWELLHTEATYIRKLKVITDLFLCCLLNLQESGLLCEVDAERLFGNIREIIQLHRSLWSSVMAPVLDKARRTKALLDPVDFLKGFKTFGSLFKPYIQYCMEEEGCMEYMRTLLRDSELFRAYVTWAEKHKQCSRLKLSDMLVKPHQRLTKYPLLLKSVLKKTDDARTRDAILTMIGSVEHFINHVNSRMRQRQEQQRLAAILSRIDAYEVVEGSTDEVDKLLKEFLRLDLTAPMPGTSPDDTRQLLLEGSLKMREGKDSKMDVYCFLFTDLFLITKPVKKAERTKVVRQPLLVDKVVCRELKDPGSFLLIYLNEFGSAVAAYTFQASGQSLCRSWVEALHNAQNLLQRLRLQELQRGQCQRLQEEEEEEEEEEDGESSTSAASSPTVLRRSSTSLDSQQCPSDGSTETISVLVVDGSDELSSPDLDVGPFGSPSDSTSVSTGTSVSTGTSSSTLIRELPTDTLPLPQGPAAQPSSCRSASIDSAYGTLSPASLRDFTRQQDVVAEEGRDVPTPRPPSPRLRRRTPVQLLPCKAQVLKSKSEASLLQLLASPPAPLSQSRSLSDLCAAPPSPPLPQRTGCAPGHPAAPSTGSSSGDSTSELSEPEEHAETPGPALGQPSRGPQPPARRTLSDPPSAQHRKLTLAQLYRIRTTLLLNSTLTASEV
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(599582..599648,606069..606145,609845..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..616472)
location: region:599582-616472:1
so has part: feature:599582-599648:1:exon
so has part: feature:606069-606145:1:exon
so has part: feature:609845-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-616472:1:exon

XP_040389673.1
type: Protein
SIO_000068: ncbiprotein

position:599582:1
position: 599582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616472:1
position: 616472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599582-599648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606069-606145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609845-609974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:616463-616472:1:exon

PLEKHG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PLEKHG5
product: pleckstrin homology and RhoGEF domain containing G5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040533738.1
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(602928..603536,606069..606145,609845..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..617370)
location: region:602928-617370:1
so has part: feature:602928-603536:1:exon
so has part: feature:606069-606145:1:exon
so has part: feature:609845-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-617370:1:exon

position:602928:1
position: 602928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602928-603536:1:exon

position:603536:1
position: 603536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606069-606145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609845-609974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:616463-617370:1:exon

PLEKHG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PLEKHG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family G member 5 isoform X1
translation: MFLYWKKRGTYELGTLPPALAGLEYRAVERFSWSSSLDITEELADERCPAEEQGLHCQHPDCTDKRRAAKVCHHAECQQLNHSSPLSLCEVCDGRLHGAMHFDGHIRFDLPPQGSILARNVSTRSCPPRTSPASDVEEDDEGPADGRGDRKSSALKLPKKKARRRHTDDPSKECFTLKFDLNVDIEAEIVPAMKKKSLGEVLLPVFERKAIEQSKVDIYLDQSNTPLSLHFEAYRFGGHYLRVKAKPGDELKVEQAARDARSASLPILRPAGTAALFGPVLEPVLGRREGAEVLAPGRRRKNMTEFLGDASIPGPELSPHGSGSLPTNGTDTWKNRAASRFSGFFSSGAGTGPFGREVDKMEQLESKLHTYSSFGLPKLPPQLRFDQDSWEEDGDDSSLALEDSWQQIIEGTEALTRRQCHQQEAIWELLHTEATYIRKLKVITDLFLCCLLNLQESGLLCEVDAERLFGNIREIIQLHRSLWSSVMAPVLDKARRTKALLDPVDFLKGFKTFGSLFKPYIQYCMEEEGCMEYMRTLLRDSELFRAYVTWAEKHKQCSRLKLSDMLVKPHQRLTKYPLLLKSVLKKTDDARTRDAILTMIGSVEHFINHVNSRMRQRQEQQRLAAILSRIDAYEVVEGSTDEVDKLLKEFLRLDLTAPMPGTSPDDTRQLLLEGSLKMREGKDSKMDVYCFLFTDLFLITKPVKKAERTKVVRQPLLVDKVVCRELKDPGSFLLIYLNEFGSAVAAYTFQASGQSLCRSWVEALHNAQNLLQRLRLQELQRGQCQRLQEEEEEEEEEEDGESSTSAASSPTVLRRSSTSLDSQQCPSDGSTETISVLVVDGSDELSSPDLDVGPFGSPSDSTSVSTGTSVSTGTSSSTLIRELPTDTLPLPQGPAAQPSSCRSASIDSAYGTLSPASLRDFTRQQDVVAEEGRDVPTPRPPSPRLRRRTPVQLLPCKAQVLKSKSEASLLQLLASPPAPLSQSRSLSDLCAAPPSPPLPQRTGCAPGHPAAPSTGSSSGDSTSELSEPEEHAETPGPALGQPSRGPQPPARRTLSDPPSAQHRKLTLAQLYRIRTTLLLNSTLTASEV
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(603404..603536,606069..606145,609845..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..616472)
location: region:603404-616472:1
so has part: feature:603404-603536:1:exon
so has part: feature:606069-606145:1:exon
so has part: feature:609845-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-616472:1:exon

XP_040389672.1
type: Protein
SIO_000068: ncbiprotein

position:603404:1
position: 603404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603404-603536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606069-606145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609845-609974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:616463-616472:1:exon

PLEKHG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PLEKHG5
product: pleckstrin homology and RhoGEF domain containing G5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533740.1
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(605797..605844,606069..606145,609845..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..617370)
location: region:605797-617370:1
so has part: feature:605797-605844:1:exon
so has part: feature:606069-606145:1:exon
so has part: feature:609845-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-617370:1:exon

position:605797:1
position: 605797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605797-605844:1:exon

position:605844:1
position: 605844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606069-606145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609845-609974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:616463-617370:1:exon

PLEKHG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PLEKHG5
product: pleckstrin homology and RhoGEF domain containing G5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533742.1
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(606412..607283,609845..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..617370)
location: region:606412-617370:1
so has part: feature:606412-607283:1:exon
so has part: feature:609845-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-617370:1:exon

position:606412:1
position: 606412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606412-607283:1:exon

position:607283:1
position: 607283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609845-609974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:616463-617370:1:exon

PLEKHG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PLEKHG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family G member 5 isoform X3
translation: MHFDGHIRFDLPPQGSILARNVSTRSCPPRTSPASDVEEDDEGPADGRGDRKSSALKLPKKKARRRHTDDPSKECFTLKFDLNVDIEAEIVPAMKKKSLGEVLLPVFERKAIEQSKVDIYLDQSNTPLSLHFEAYRFGGHYLRVKAKPGDELKVEQAARDARSASLPILRPAGTAALFGPVLEPVLGRREGAEVLAPGRRRKNMTEFLGDASIPGPELSPHGSGSLPTNGTDTWKNRAASRFSGFFSSGAGTGPFGREVDKMEQLESKLHTYSSFGLPKLPPQLRFDQDSWEEDGDDSSLALEDSWQQIIEGTEALTRRQCHQQEAIWELLHTEATYIRKLKVITDLFLCCLLNLQESGLLCEVDAERLFGNIREIIQLHRSLWSSVMAPVLDKARRTKALLDPVDFLKGFKTFGSLFKPYIQYCMEEEGCMEYMRTLLRDSELFRAYVTWAEKHKQCSRLKLSDMLVKPHQRLTKYPLLLKSVLKKTDDARTRDAILTMIGSVEHFINHVNSRMRQRQEQQRLAAILSRIDAYEVVEGSTDEVDKLLKEFLRLDLTAPMPGTSPDDTRQLLLEGSLKMREGKDSKMDVYCFLFTDLFLITKPVKKAERTKVVRQPLLVDKVVCRELKDPGSFLLIYLNEFGSAVAAYTFQASGQSLCRSWVEALHNAQNLLQRLRLQELQRGQCQRLQEEEEEEEEEEDGESSTSAASSPTVLRRSSTSLDSQQCPSDGSTETISVLVVDGSDELSSPDLDVGPFGSPSDSTSVSTGTSVSTGTSSSTLIRELPTDTLPLPQGPAAQPSSCRSASIDSAYGTLSPASLRDFTRQQDVVAEEGRDVPTPRPPSPRLRRRTPVQLLPCKAQVLKSKSEASLLQLLASPPAPLSQSRSLSDLCAAPPSPPLPQRTGCAPGHPAAPSTGSSSGDSTSELSEPEEHAETPGPALGQPSRGPQPPARRTLSDPPSAQHRKLTLAQLYRIRTTLLLNSTLTASEV
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(609932..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..616472)
location: region:609932-616472:1
so has part: feature:609932-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-616472:1:exon

XP_040389674.1
type: Protein
SIO_000068: ncbiprotein

position:609932:1
position: 609932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609932-609974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:616463-616472:1:exon

PLEKHG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PLEKHG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family G member 5 isoform X3
translation: MHFDGHIRFDLPPQGSILARNVSTRSCPPRTSPASDVEEDDEGPADGRGDRKSSALKLPKKKARRRHTDDPSKECFTLKFDLNVDIEAEIVPAMKKKSLGEVLLPVFERKAIEQSKVDIYLDQSNTPLSLHFEAYRFGGHYLRVKAKPGDELKVEQAARDARSASLPILRPAGTAALFGPVLEPVLGRREGAEVLAPGRRRKNMTEFLGDASIPGPELSPHGSGSLPTNGTDTWKNRAASRFSGFFSSGAGTGPFGREVDKMEQLESKLHTYSSFGLPKLPPQLRFDQDSWEEDGDDSSLALEDSWQQIIEGTEALTRRQCHQQEAIWELLHTEATYIRKLKVITDLFLCCLLNLQESGLLCEVDAERLFGNIREIIQLHRSLWSSVMAPVLDKARRTKALLDPVDFLKGFKTFGSLFKPYIQYCMEEEGCMEYMRTLLRDSELFRAYVTWAEKHKQCSRLKLSDMLVKPHQRLTKYPLLLKSVLKKTDDARTRDAILTMIGSVEHFINHVNSRMRQRQEQQRLAAILSRIDAYEVVEGSTDEVDKLLKEFLRLDLTAPMPGTSPDDTRQLLLEGSLKMREGKDSKMDVYCFLFTDLFLITKPVKKAERTKVVRQPLLVDKVVCRELKDPGSFLLIYLNEFGSAVAAYTFQASGQSLCRSWVEALHNAQNLLQRLRLQELQRGQCQRLQEEEEEEEEEEDGESSTSAASSPTVLRRSSTSLDSQQCPSDGSTETISVLVVDGSDELSSPDLDVGPFGSPSDSTSVSTGTSVSTGTSSSTLIRELPTDTLPLPQGPAAQPSSCRSASIDSAYGTLSPASLRDFTRQQDVVAEEGRDVPTPRPPSPRLRRRTPVQLLPCKAQVLKSKSEASLLQLLASPPAPLSQSRSLSDLCAAPPSPPLPQRTGCAPGHPAAPSTGSSSGDSTSELSEPEEHAETPGPALGQPSRGPQPPARRTLSDPPSAQHRKLTLAQLYRIRTTLLLNSTLTASEV
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(609932..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..616472)
location: region:609932-616472:1
so has part: feature:609932-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-616472:1:exon

XP_040389675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609932-609974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:616463-616472:1:exon

PLEKHG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PLEKHG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family G member 5 isoform X3
translation: MHFDGHIRFDLPPQGSILARNVSTRSCPPRTSPASDVEEDDEGPADGRGDRKSSALKLPKKKARRRHTDDPSKECFTLKFDLNVDIEAEIVPAMKKKSLGEVLLPVFERKAIEQSKVDIYLDQSNTPLSLHFEAYRFGGHYLRVKAKPGDELKVEQAARDARSASLPILRPAGTAALFGPVLEPVLGRREGAEVLAPGRRRKNMTEFLGDASIPGPELSPHGSGSLPTNGTDTWKNRAASRFSGFFSSGAGTGPFGREVDKMEQLESKLHTYSSFGLPKLPPQLRFDQDSWEEDGDDSSLALEDSWQQIIEGTEALTRRQCHQQEAIWELLHTEATYIRKLKVITDLFLCCLLNLQESGLLCEVDAERLFGNIREIIQLHRSLWSSVMAPVLDKARRTKALLDPVDFLKGFKTFGSLFKPYIQYCMEEEGCMEYMRTLLRDSELFRAYVTWAEKHKQCSRLKLSDMLVKPHQRLTKYPLLLKSVLKKTDDARTRDAILTMIGSVEHFINHVNSRMRQRQEQQRLAAILSRIDAYEVVEGSTDEVDKLLKEFLRLDLTAPMPGTSPDDTRQLLLEGSLKMREGKDSKMDVYCFLFTDLFLITKPVKKAERTKVVRQPLLVDKVVCRELKDPGSFLLIYLNEFGSAVAAYTFQASGQSLCRSWVEALHNAQNLLQRLRLQELQRGQCQRLQEEEEEEEEEEDGESSTSAASSPTVLRRSSTSLDSQQCPSDGSTETISVLVVDGSDELSSPDLDVGPFGSPSDSTSVSTGTSVSTGTSSSTLIRELPTDTLPLPQGPAAQPSSCRSASIDSAYGTLSPASLRDFTRQQDVVAEEGRDVPTPRPPSPRLRRRTPVQLLPCKAQVLKSKSEASLLQLLASPPAPLSQSRSLSDLCAAPPSPPLPQRTGCAPGHPAAPSTGSSSGDSTSELSEPEEHAETPGPALGQPSRGPQPPARRTLSDPPSAQHRKLTLAQLYRIRTTLLLNSTLTASEV
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(609932..609974,610093..610195,610322..610382,610501..610592,610670..610806,610882..611030,612837..613022,613195..613365,613440..613535,613627..613677,613868..614017,614095..614205,614272..614421,614506..614643,614726..614845,614921..615053,615165..615280,615354..615523,615599..616381,616463..616472)
location: region:609932-616472:1
so has part: feature:609932-609974:1:exon
so has part: feature:610093-610195:1:exon
so has part: feature:610322-610382:1:exon
so has part: feature:610501-610592:1:exon
so has part: feature:610670-610806:1:exon
so has part: feature:610882-611030:1:exon
so has part: feature:612837-613022:1:exon
so has part: feature:613195-613365:1:exon
so has part: feature:613440-613535:1:exon
so has part: feature:613627-613677:1:exon
so has part: feature:613868-614017:1:exon
so has part: feature:614095-614205:1:exon
so has part: feature:614272-614421:1:exon
so has part: feature:614506-614643:1:exon
so has part: feature:614726-614845:1:exon
so has part: feature:614921-615053:1:exon
so has part: feature:615165-615280:1:exon
so has part: feature:615354-615523:1:exon
so has part: feature:615599-616381:1:exon
so has part: feature:616463-616472:1:exon

XP_040389676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609932-609974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610093-610195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:610322-610382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610501-610592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610670-610806:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610882-611030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:612837-613022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613195-613365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613440-613535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613627-613677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613868-614017:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:614095-614205:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:614272-614421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614506-614643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614726-614845:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614921-615053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615165-615280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:615354-615523:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:615599-616381:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:616463-616472:1:exon

TNFRSF25
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TNFRSF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 617538..622164
location: region:617538-622164:1
so has part: feature:617538-622164:1:exon
subclass of: SO_0000010

121058337
type: Gene
SIO_000068: ncbigene

position:617538:1
position: 617538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622164:1
position: 622164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617538-622164:1:exon

TNFRSF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TNFRSF25
product: TNF receptor superfamily member 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040533745.1
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(617538..617948,619717..619912,620038..620395,620471..620969,621048..622164)
location: region:617538-622164:1
so has part: feature:617538-617948:1:exon
so has part: feature:619717-619912:1:exon
so has part: feature:620038-620395:1:exon
so has part: feature:620471-620969:1:exon
so has part: feature:621048-622164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:617538-617948:1:exon

position:617948:1
position: 617948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619717-619912:1:exon

position:619717:1
position: 619717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619912:1
position: 619912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620038-620395:1:exon

position:620038:1
position: 620038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620395:1
position: 620395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:620471-620969:1:exon

position:620471:1
position: 620471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620969:1
position: 620969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:621048-622164:1:exon

position:621048:1
position: 621048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TNFRSF25
product: TNF receptor superfamily member 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040533746.1
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(617541..617948,619717..619912,620038..620395,620471..620682,620764..620969,621048..622164)
location: region:617541-622164:1
so has part: feature:617541-617948:1:exon
so has part: feature:619717-619912:1:exon
so has part: feature:620038-620395:1:exon
so has part: feature:620471-620682:1:exon
so has part: feature:620764-620969:1:exon
so has part: feature:621048-622164:1:exon

position:617541:1
position: 617541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617541-617948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619717-619912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620038-620395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620471-620682:1:exon

position:620682:1
position: 620682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:620764-620969:1:exon

position:620764:1
position: 620764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:621048-622164:1:exon

TNFRSF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TNFRSF25
product: TNF receptor superfamily member 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040533747.1
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(617544..617948,619717..619912,620038..620169,620243..620395,620471..620552,620624..620969,621048..622164)
location: region:617544-622164:1
so has part: feature:617544-617948:1:exon
so has part: feature:619717-619912:1:exon
so has part: feature:620038-620169:1:exon
so has part: feature:620243-620395:1:exon
so has part: feature:620471-620552:1:exon
so has part: feature:620624-620969:1:exon
so has part: feature:621048-622164:1:exon

position:617544:1
position: 617544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617544-617948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619717-619912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620038-620169:1:exon

position:620169:1
position: 620169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:620243-620395:1:exon

position:620243:1
position: 620243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:620471-620552:1:exon

position:620552:1
position: 620552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620624-620969:1:exon

position:620624:1
position: 620624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:621048-622164:1:exon

TNFRSF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TNFRSF25
product: TNF receptor superfamily member 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040533748.1
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(617549..617948,619717..619912,620038..620169,620243..620395,620471..620552,620624..620682,620764..620969,621048..622164)
location: region:617549-622164:1
so has part: feature:617549-617948:1:exon
so has part: feature:619717-619912:1:exon
so has part: feature:620038-620169:1:exon
so has part: feature:620243-620395:1:exon
so has part: feature:620471-620552:1:exon
so has part: feature:620624-620682:1:exon
so has part: feature:620764-620969:1:exon
so has part: feature:621048-622164:1:exon

position:617549:1
position: 617549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617549-617948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619717-619912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620038-620169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620243-620395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620471-620552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620624-620682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620764-620969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621048-622164:1:exon

TNFRSF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TNFRSF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 25 isoform X1
translation: MKRHCPGAASVFLAVLWLLASGLLLLGCQDCAVSQGQRGPARLPARPRRLAAKPSCPAGMNWIDAVQQCCPQCPPGTYLKNPCSMHGKGSDCEACPDGTYHSQPNTRTKCHVCYECDHHGELAVPRAALCCAMLYHPAHPHTCSFPARAEQLLGHQQRRLWLQAWPLPQLPERALQRILLQQVPALPGEAGPAALLRHAGHAVRQLQAQLLRRGQRVPAVPHVSSSPGGVAWPAVQRSAHVPSPCRSTPETCGEECQQACGGSTRGAWGGGAGGARAAGWARLCGTPRCSLAGSGLQYLLLALTVPLFMGAFVIYKRRWLQHRALVGSPLLTVPPQGCPSPMAHTFSPTQEAVATETVLCQVCEHGPSTARKSPESWALHKCPDGAALLDGRVEPSAPQEPSTARGPESHPRSPQRCTLLQGSQLYAVINVVPVRRWKEFMRVLELRDTEIELVEMEVTHFRDQQYEMLKRWCQQTSATLDRIFAALEHMELAGCAEALRQSLSAGP
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(617919..617948,619717..619912,620038..620395,620471..620969,621048..621488)
location: region:617919-621488:1
so has part: feature:617919-617948:1:exon
so has part: feature:619717-619912:1:exon
so has part: feature:620038-620395:1:exon
so has part: feature:620471-620969:1:exon
so has part: feature:621048-621488:1:exon

XP_040389679.1
type: Protein
SIO_000068: ncbiprotein

position:617919:1
position: 617919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621488:1
position: 621488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617919-617948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619717-619912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620038-620395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620471-620969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621048-621488:1:exon

TNFRSF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TNFRSF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 25 isoform X2
translation: MKRHCPGAASVFLAVLWLLASGLLLLGCQDCAVSQGQRGPARLPARPRRLAAKPSCPAGMNWIDAVQQCCPQCPPGTYLKNPCSMHGKGSDCEACPDGTYHSQPNTRTKCHVCYECDHHGELAVPRAALCCAMLYHPAHPHTCSFPARAEQLLGHQQRRLWLQAWPLPQLPERALQRILLQQVPALPGEAGPAALLRHAGHAVRQLQAQLLRRGQRVPAVPHVSSSPGGVAWPAVQRSAHVPSPCRSTPETCGEECQQACGGSTRGSGLQYLLLALTVPLFMGAFVIYKRRWLQHRALVGSPLLTVPPQGCPSPMAHTFSPTQEAVATETVLCQVCEHGPSTARKSPESWALHKCPDGAALLDGRVEPSAPQEPSTARGPESHPRSPQRCTLLQGSQLYAVINVVPVRRWKEFMRVLELRDTEIELVEMEVTHFRDQQYEMLKRWCQQTSATLDRIFAALEHMELAGCAEALRQSLSAGP
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(617919..617948,619717..619912,620038..620395,620471..620682,620764..620969,621048..621488)
location: region:617919-621488:1
so has part: feature:617919-617948:1:exon
so has part: feature:619717-619912:1:exon
so has part: feature:620038-620395:1:exon
so has part: feature:620471-620682:1:exon
so has part: feature:620764-620969:1:exon
so has part: feature:621048-621488:1:exon

XP_040389680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617919-617948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619717-619912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620038-620395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620471-620682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620764-620969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621048-621488:1:exon

TNFRSF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TNFRSF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 25 isoform X3
translation: MKRHCPGAASVFLAVLWLLASGLLLLGCQDCAVSQGQRGPARLPARPRRLAAKPSCPAGMNWIDAVQQCCPQCPPGTYLKNPCSMHGKGSDCEACPDGTYHSQPNTRTKCHVCYECDHHAFQRVLSNCSATSNVACGCKPGHFRSCLNEHCNEFSCSKCQLCPGRLVQRPCSDTQDTLCGSCKPNFYAEGSECRPCHMSTPETCGEECQQACGGSTRGAWGGGAGGARAAGWARLCGTPRCSLAGSGLQYLLLALTVPLFMGAFVIYKRRWLQHRALVGSPLLTVPPQGCPSPMAHTFSPTQEAVATETVLCQVCEHGPSTARKSPESWALHKCPDGAALLDGRVEPSAPQEPSTARGPESHPRSPQRCTLLQGSQLYAVINVVPVRRWKEFMRVLELRDTEIELVEMEVTHFRDQQYEMLKRWCQQTSATLDRIFAALEHMELAGCAEALRQSLSAGP
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(617919..617948,619717..619912,620038..620169,620243..620395,620471..620552,620624..620969,621048..621488)
location: region:617919-621488:1
so has part: feature:617919-617948:1:exon
so has part: feature:619717-619912:1:exon
so has part: feature:620038-620169:1:exon
so has part: feature:620243-620395:1:exon
so has part: feature:620471-620552:1:exon
so has part: feature:620624-620969:1:exon
so has part: feature:621048-621488:1:exon

XP_040389681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617919-617948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619717-619912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620038-620169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620243-620395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620471-620552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620624-620969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:621048-621488:1:exon

TNFRSF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TNFRSF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 25 isoform X4
translation: MKRHCPGAASVFLAVLWLLASGLLLLGCQDCAVSQGQRGPARLPARPRRLAAKPSCPAGMNWIDAVQQCCPQCPPGTYLKNPCSMHGKGSDCEACPDGTYHSQPNTRTKCHVCYECDHHAFQRVLSNCSATSNVACGCKPGHFRSCLNEHCNEFSCSKCQLCPGRLVQRPCSDTQDTLCGSCKPNFYAEGSECRPCHMSTPETCGEECQQACGGSTRGSGLQYLLLALTVPLFMGAFVIYKRRWLQHRALVGSPLLTVPPQGCPSPMAHTFSPTQEAVATETVLCQVCEHGPSTARKSPESWALHKCPDGAALLDGRVEPSAPQEPSTARGPESHPRSPQRCTLLQGSQLYAVINVVPVRRWKEFMRVLELRDTEIELVEMEVTHFRDQQYEMLKRWCQQTSATLDRIFAALEHMELAGCAEALRQSLSAGP
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(617919..617948,619717..619912,620038..620169,620243..620395,620471..620552,620624..620682,620764..620969,621048..621488)
location: region:617919-621488:1
so has part: feature:617919-617948:1:exon
so has part: feature:619717-619912:1:exon
so has part: feature:620038-620169:1:exon
so has part: feature:620243-620395:1:exon
so has part: feature:620471-620552:1:exon
so has part: feature:620624-620682:1:exon
so has part: feature:620764-620969:1:exon
so has part: feature:621048-621488:1:exon

XP_040389682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617919-617948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619717-619912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620038-620169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620243-620395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620471-620552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620624-620682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620764-620969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621048-621488:1:exon

ESPN
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ESPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(622143..635182)
location: region:622143-635182:-1
so has part: feature:622143-635182:-1:exon
subclass of: SO_0000010

121058336
type: Gene
SIO_000068: ncbigene

position:622143:-1
position: 622143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635182:-1
position: 635182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622143-635182:-1:exon

ESPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ESPN
product: espin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533744.1
SIO_010081: ESPN
subclass of: SO_0000673
so part of: ESPN
location: complement(join(622143..622718,622813..622824,622910..622989,625553..625834,625938..626083,627280..627306,627632..627815,627890..628051,629518..629789,629866..630085,630195..630326,630409..630591,630691..630877,633426..633619,634890..635182))
location: region:622143-635182:-1
so has part: feature:634890-635182:-1:exon
so has part: feature:633426-633619:-1:exon
so has part: feature:630691-630877:-1:exon
so has part: feature:630409-630591:-1:exon
so has part: feature:630195-630326:-1:exon
so has part: feature:629866-630085:-1:exon
so has part: feature:629518-629789:-1:exon
so has part: feature:627890-628051:-1:exon
so has part: feature:627632-627815:-1:exon
so has part: feature:627280-627306:-1:exon
so has part: feature:625938-626083:-1:exon
so has part: feature:625553-625834:-1:exon
so has part: feature:622910-622989:-1:exon
so has part: feature:622813-622824:-1:exon
so has part: feature:622143-622718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634890-635182:-1:exon

position:634890:-1
position: 634890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633426-633619:-1:exon

position:633426:-1
position: 633426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633619:-1
position: 633619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:630691-630877:-1:exon

position:630691:-1
position: 630691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630877:-1
position: 630877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:630409-630591:-1:exon

position:630409:-1
position: 630409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630591:-1
position: 630591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:630195-630326:-1:exon

position:630195:-1
position: 630195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630326:-1
position: 630326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:629866-630085:-1:exon

position:629866:-1
position: 629866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630085:-1
position: 630085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:629518-629789:-1:exon

position:629518:-1
position: 629518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629789:-1
position: 629789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:627890-628051:-1:exon

position:627890:-1
position: 627890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628051:-1
position: 628051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:627632-627815:-1:exon

position:627632:-1
position: 627632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627815:-1
position: 627815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:627280-627306:-1:exon

position:627280:-1
position: 627280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627306:-1
position: 627306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:625938-626083:-1:exon

position:625938:-1
position: 625938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626083:-1
position: 626083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:625553-625834:-1:exon

position:625553:-1
position: 625553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625834:-1
position: 625834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:622910-622989:-1:exon

position:622910:-1
position: 622910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622989:-1
position: 622989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:622813-622824:-1:exon

position:622813:-1
position: 622813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622824:-1
position: 622824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:622143-622718:-1:exon

position:622718:-1
position: 622718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ESPN
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: espin
translation: MALERALLAARQGDVEALRGLRAAGLLRPGLRDALGASPAHHAARAGRLACLRYLAAEAALRGDARARNGXTPAHDAAATGNLACLQWLLTQGGCGVQDTDNSGATILHLAARFGHHEVIDWLLRFGGSDPTAATDTGALPVHYAAAKGDFPSLRLLLGHCPSTLSAQTKTGATPLYLACQEGHLEIIQYLVKDCGADPHVRANDGMTPLHAAAQMGHNTVIVWLMSFTTVSLSERDDDGATAMHFAASRGHAKVLSWLLLHGGEITADGWGGTPLHDAAENGELECCQILVVNGADLSIRDKDGYTAADLADYNGHSHCAKYLRTVENMSVEHRVLSRDPSADGECRQPDSGMSSPNTTASAPQARFEVGSPASTLSNYDSCNSSQSSTGEKRGGPHGAPTARVPEAALTDMQAYMDMLNPETGPRGRGSASEGPPPPPPSFPPPPPPPATRPPPPPPGYPAPAPPTSPDTADIYVRAKNNLRHVESQALRRELASREGSPEGLRRADSTRRSRNFSKQPSTGDYYKHLGPSAVELPGPCRMAHSEEASPLSADTMHNGGPAESKPGAELPPPPPPPPLPETACPPPPPPPPPAEAPTGPRRSSSSTGKGKALRQMKSTKSFNMMSPTGDNSELLAEIKAGKSLKPTPQSKGFTTVFSGSGQAGANAESPLSSPSPTRTPTPPATPEAVVLPRCVAGASPELVLNGSSPVPGPGAGGPPDVEALVPSHDEQGRPIPEWKRQVMVRKLQLRMQEEEEQRRKEKEEEARLASMPAWRRDILRKKLEEEREQKRKEQEKLKREEEEKEKEQSEKLRTLGYDETKLAPWQRQIILKKGDIAKH
SIO_010081: ESPN
subclass of: SO_0000673
so part of: ESPN
location: complement(join(622571..622718,622813..622824,622910..622989,625553..625834,625938..626083,627280..627306,627632..627815,627890..628051,629518..629789,629866..630085,630195..630326,630409..630591,630691..630877,633426..633619,634890..635182))
location: region:622571-635182:-1
so has part: feature:634890-635182:-1:exon
so has part: feature:633426-633619:-1:exon
so has part: feature:630691-630877:-1:exon
so has part: feature:630409-630591:-1:exon
so has part: feature:630195-630326:-1:exon
so has part: feature:629866-630085:-1:exon
so has part: feature:629518-629789:-1:exon
so has part: feature:627890-628051:-1:exon
so has part: feature:627632-627815:-1:exon
so has part: feature:627280-627306:-1:exon
so has part: feature:625938-626083:-1:exon
so has part: feature:625553-625834:-1:exon
so has part: feature:622910-622989:-1:exon
so has part: feature:622813-622824:-1:exon
so has part: feature:622571-622718:-1:exon

XP_040389678.1
type: Protein
SIO_000068: ncbiprotein

position:622571:-1
position: 622571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634890-635182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633426-633619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630691-630877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630409-630591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:630195-630326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:629866-630085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:629518-629789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:627890-628051:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:627632-627815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:627280-627306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:625938-626083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:625553-625834:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:622910-622989:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:622813-622824:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:622571-622718:-1:exon

LOC121058338
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(623002..625493)
location: region:623002-625493:-1
so has part: feature:623002-625493:-1:exon
subclass of: SO_0000010

121058338
type: Gene
SIO_000068: ncbigene

position:623002:-1
position: 623002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625493:-1
position: 625493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623002-625493:-1:exon

LOC121058338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058338
product: espin-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040533749.1
SIO_010081: LOC121058338
subclass of: SO_0000673
so part of: LOC121058338
location: complement(623002..625493)
location: region:623002-625493:-1
so has part: feature:623002-625493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623002-625493:-1:exon

LOC121058338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: espin-like protein
translation: MLGPFGQLMTEEDILRIERQIENLQVMHKVQTVETELEQLEEELQQLLPLPATLAPERFSLDPRRLQGHAEDLPAWCSKTSALLRSMAMLLAALGGRESPGVRGVASSTMPQRFPPSAPAGTQQDAQREILHCGVSVRSLKANYEGLVGAPVPCNRVTKRKRSLPPGAPVEVCTREPVLEEEYGDGDAVGVLRRSQPVQTELSCLQERIDARKERAVSLFLEHWKKWALAEAPGARTRGDDRLRRLWKQRQAVGRLLARWRSVAHGVPGRQIRRLSRTDVLYWPEHFLPHVRGSPVPYDSLSLDLFMLGYFQLLEMNLSPEERRFRHLLCYEMFDRLGTHSWECIRRFHRAALERVEAGHCCWLDGFEDLKQEFFGDSPTVPTAAVVESSPSSPSLAPTAAAQGGKEPAQLVSELGEFSDEDICRYIDRSFSFWKEKEAEMFDI
SIO_010081: LOC121058338
subclass of: SO_0000673
so part of: LOC121058338
location: complement(623789..625123)
location: region:623789-625123:-1
so has part: feature:623789-625123:-1:exon

XP_040389683.1
type: Protein
SIO_000068: ncbiprotein

position:623789:-1
position: 623789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625123:-1
position: 625123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623789-625123:-1:exon

LOC121058439
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 636447..637313
location: region:636447-637313:1
so has part: feature:636447-637313:1:exon
subclass of: SO_0000010

121058439
type: Gene
SIO_000068: ncbigene

position:636447:1
position: 636447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637313:1
position: 637313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636447-637313:1:exon

LOC121058439
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121058439
product: transcription factor HES-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040533994.1
SIO_010081: LOC121058439
subclass of: SO_0000673
so part of: LOC121058439
location: join(636447..636506,636574..636669,636977..637067,637141..637313)
location: region:636447-637313:1
so has part: feature:636447-636506:1:exon
so has part: feature:636574-636669:1:exon
so has part: feature:636977-637067:1:exon
so has part: feature:637141-637313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636447-636506:1:exon

position:636506:1
position: 636506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636574-636669:1:exon

position:636574:1
position: 636574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636669:1
position: 636669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:636977-637067:1:exon

position:636977:1
position: 636977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637067:1
position: 637067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:637141-637313:1:exon

position:637141:1
position: 637141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121058439
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121058439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HES-2-like
translation: MSPPGSPPRPPRRPAAETRKTLKPLLEKRRRARINESLSQLKALILPLVGKDSSRYSKLEKADILEMTVQFLKEVPAAPSAPEPSESFRAGYRACLARLGALLAPPPPPAARRRLPELPPPACPKAAPPPPAAPLWRPW
SIO_010081: LOC121058439
subclass of: SO_0000673
so part of: LOC121058439
location: join(636447..636506,636574..636669,636977..637067,637141..637313)
location: region:636447-637313:1
so has part: feature:636447-636506:1:exon
so has part: feature:636574-636669:1:exon
so has part: feature:636977-637067:1:exon
so has part: feature:637141-637313:1:exon

XP_040389928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636447-636506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:636574-636669:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636977-637067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637141-637313:1:exon

ACOT7
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ACOT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 638407..650056
location: region:638407-650056:1
so has part: feature:638407-650056:1:exon
subclass of: SO_0000010

121058440
type: Gene
SIO_000068: ncbigene

position:638407:1
position: 638407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650056:1
position: 650056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638407-650056:1:exon

ACOT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ACOT7
product: acyl-CoA thioesterase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040533995.1
SIO_010081: ACOT7
subclass of: SO_0000673
so part of: ACOT7
location: join(638407..638587,639244..639511,639866..639983,640282..640438,642269..642360,642698..642812,643378..643392,643925..644011,646501..646617,647049..647233,649317..650056)
location: region:638407-650056:1
so has part: feature:638407-638587:1:exon
so has part: feature:639244-639511:1:exon
so has part: feature:639866-639983:1:exon
so has part: feature:640282-640438:1:exon
so has part: feature:642269-642360:1:exon
so has part: feature:642698-642812:1:exon
so has part: feature:643378-643392:1:exon
so has part: feature:643925-644011:1:exon
so has part: feature:646501-646617:1:exon
so has part: feature:647049-647233:1:exon
so has part: feature:649317-650056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:638407-638587:1:exon

position:638587:1
position: 638587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639244-639511:1:exon

position:639244:1
position: 639244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639511:1
position: 639511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:639866-639983:1:exon

position:639866:1
position: 639866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639983:1
position: 639983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:640282-640438:1:exon

position:640282:1
position: 640282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640438:1
position: 640438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:642269-642360:1:exon

position:642269:1
position: 642269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642360:1
position: 642360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:642698-642812:1:exon

position:642698:1
position: 642698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642812:1
position: 642812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:643378-643392:1:exon

position:643378:1
position: 643378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643392:1
position: 643392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:643925-644011:1:exon

position:643925:1
position: 643925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644011:1
position: 644011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:646501-646617:1:exon

position:646501:1
position: 646501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646617:1
position: 646617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:647049-647233:1:exon

position:647049:1
position: 647049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647233:1
position: 647233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:649317-650056:1:exon

position:649317:1
position: 649317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACOT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ACOT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic acyl coenzyme A thioester hydrolase
translation: MQPGAHGLLATEPQQGQESCPGTPQRLRRPRGLPVTKQFSLSTSRVPALPAAAGAGREAPRSGPWAPPGPRSRSRSRPRSRPAPPAVPAAPPPTHGRGGAGRGGARFRSAPPPPPPPAAAAAAPLLAGAGAAHVGAGAGRPGPGHHPVSRIMRPDDANVAGNVHGGTVLKMIEEAGAIISTRHCNSGTGEPCVAALARVERTDFLSPMCIGEVANVSAEITYTSKRSVEVQVNVMSENILTGAKKVTNKATLWYVPLSLKNVNKVVEVPPIQYARKEQEDEGRKRYEEQKLDRLETKQRNGDVIMPVINPDRQTKEPHTVGYSQSSLIHLVGPSDCTLLGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHEKIKKGSVITISGRMTFTSNKSMEIEVFVDADPFVDEPQERYRAVSAFFTYVSLSKEGKPLPVPQLLTETEDEKRRFEEGKGRYLQTKAKRQAQMQQAAQH
SIO_010081: ACOT7
subclass of: SO_0000673
so part of: ACOT7
location: join(638407..638587,639244..639511,639866..639983,640282..640438,642269..642360,642698..642812,643378..643392,643925..644011,646501..646617,647049..647233,649317..649421)
location: region:638407-649421:1
so has part: feature:638407-638587:1:exon
so has part: feature:639244-639511:1:exon
so has part: feature:639866-639983:1:exon
so has part: feature:640282-640438:1:exon
so has part: feature:642269-642360:1:exon
so has part: feature:642698-642812:1:exon
so has part: feature:643378-643392:1:exon
so has part: feature:643925-644011:1:exon
so has part: feature:646501-646617:1:exon
so has part: feature:647049-647233:1:exon
so has part: feature:649317-649421:1:exon

XP_040389929.1
type: Protein
SIO_000068: ncbiprotein

position:649421:1
position: 649421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638407-638587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639244-639511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639866-639983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640282-640438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:642269-642360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642698-642812:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643378-643392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643925-644011:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:646501-646617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:647049-647233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:649317-649421:1:exon

GPR153
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GPR153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 650664..654505
location: region:650664-654505:1
so has part: feature:650664-654505:1:exon
subclass of: SO_0000010

121058259
type: Gene
SIO_000068: ncbigene

position:650664:1
position: 650664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654505:1
position: 654505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650664-654505:1:exon

GPR153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GPR153
product: G protein-coupled receptor 153, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040533601.1
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(650664..650712,651897..652363,652504..652933,652997..653186,653263..653447,653516..654505)
location: region:650664-654505:1
so has part: feature:650664-650712:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:652997-653186:1:exon
so has part: feature:653263-653447:1:exon
so has part: feature:653516-654505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650664-650712:1:exon

position:650712:1
position: 650712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

position:651897:1
position: 651897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652363:1
position: 652363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

position:652504:1
position: 652504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652933:1
position: 652933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:652997-653186:1:exon

position:652997:1
position: 652997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653186:1
position: 653186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:653263-653447:1:exon

position:653263:1
position: 653263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653447:1
position: 653447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:653516-654505:1:exon

position:653516:1
position: 653516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GPR153
product: G protein-coupled receptor 153, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533600.1
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651269..651806,651897..652363,652504..652933,653078..653186,653263..653447,653516..654505)
location: region:651269-654505:1
so has part: feature:651269-651806:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:653078-653186:1:exon
so has part: feature:653263-653447:1:exon
so has part: feature:653516-654505:1:exon

position:651269:1
position: 651269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651269-651806:1:exon

position:651806:1
position: 651806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653078-653186:1:exon

position:653078:1
position: 653078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:653263-653447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:653516-654505:1:exon

GPR153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GPR153
product: G protein-coupled receptor 153, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040533599.1
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651275..651806,651897..652363,652504..652933,652997..653186,653263..653447,653516..654505)
location: region:651275-654505:1
so has part: feature:651275-651806:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:652997-653186:1:exon
so has part: feature:653263-653447:1:exon
so has part: feature:653516-654505:1:exon

position:651275:1
position: 651275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651275-651806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652997-653186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653263-653447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:653516-654505:1:exon

GPR153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GPR153
product: G protein-coupled receptor 153, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040533603.1
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651447..651806,651897..652363,652504..652933,652997..653186,653267..653447,653516..653654)
location: region:651447-653654:1
so has part: feature:651447-651806:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:652997-653186:1:exon
so has part: feature:653267-653447:1:exon
so has part: feature:653516-653654:1:exon

position:651447:1
position: 651447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653654:1
position: 653654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651447-651806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652997-653186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653267-653447:1:exon

position:653267:1
position: 653267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:653516-653654:1:exon

GPR153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GPR153
product: G protein-coupled receptor 153, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040533602.1
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651449..651806,651897..652363,652504..652933,652997..653191,653263..653447,653516..653654)
location: region:651449-653654:1
so has part: feature:651449-651806:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:652997-653191:1:exon
so has part: feature:653263-653447:1:exon
so has part: feature:653516-653654:1:exon

position:651449:1
position: 651449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651449-651806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652997-653191:1:exon

position:653191:1
position: 653191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:653263-653447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:653516-653654:1:exon

GPR153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GPR153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 153 isoform X1
translation: MRLVGAVRGCAPWADPAGGVPDPRASRWPARHGAVGSFPLRGRGGCVSSAVAASLLLLPEESNYSCETAVPPLHPLTCPCRRPSGTSLVLGSAAPRTSLDGPWCALGCLRLRPRSASPMVPRPSTMRDEQRLPGNAVAWLACAGVSLLANAWGILSISAKQKKWKPLEFLLCSLAGTHILNTTIPITTYAVVQLRRRRSGYEWNEGLCKVFVSTFYTLTLVTCFSVTSLSYHRMWMVRWPVNYRLSNTRKQAVHTVMGIWMVSFILSTLPAVGWHDTTERFYARDCRFVVTEIGLGFGVCFLLLIGGSMAVGAVCIAIALFHTIWGRRGPDASRNRFHVPTIVVEDAQGKRRSSIDGSEPIKTSLQITYLVTVIVLIYDVLMGFPVLVVSAASLRSDASSDWMVLCLIWCSLAQSLLLPLFLWACDRYRADPRAVCEKCRAVLASDDGDEESSLEGAAAGELVYDRPYEYGCAAEVLALDPVAKRDFSALERGLPPVSPARTEPGDRMQYLQVPPLRRFSHDETDLWTSSQVAAYLQRWGAGGEVAGLARLLAPRRDRPRHGFVPCPEEQLAYRHRRRSADSLASLLHVPGEGLRLADLRGLGGEEGATGSPGRSASVALLPVAAPQQAGLLSAFPLATLQHEPRALPGPPGALAVPGPRLAPEDPARLFAPRPAERCGGRALRPGLGDGGRGSSSSLLSSPSASSGYVTFLSGSIGSAS
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651543..651806,651897..652363,652504..652933,652997..653186,653263..653447,653516..654142)
location: region:651543-654142:1
so has part: feature:651543-651806:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:652997-653186:1:exon
so has part: feature:653263-653447:1:exon
so has part: feature:653516-654142:1:exon

XP_040389533.1
type: Protein
SIO_000068: ncbiprotein

position:651543:1
position: 651543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654142:1
position: 654142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651543-651806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652997-653186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653263-653447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:653516-654142:1:exon

GPR153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GPR153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 153 isoform X2
translation: MRLVGAVRGCAPWADPAGGVPDPRASRWPARHGAVGSFPLRGRGGCVSSAVAASLLLLPEESNYSCETAVPPLHPLTCPCRRPSGTSLVLGSAAPRTSLDGPWCALGCLRLRPRSASPMVPRPSTMRDEQRLPGNAVAWLACAGVSLLANAWGILSISAKQKKWKPLEFLLCSLAGTHILNTTIPITTYAVVQLRRRRSGYEWNEGLCKVFVSTFYTLTLVTCFSVTSLSYHRMWMVRWPVNYRLSNTRKQAVHTVMGIWMVSFILSTLPAVGWHDTTERFYARDCRFVVTEIGLGFGVCFLLLIGGSMAVGAVCIAIALFHTIWGRRGPDASRNRFHVPTIVVEDAQGKRRSSIDGSEPIKTSLQITYLVTVIVLIYDVLMGFPVLSLLLPLFLWACDRYRADPRAVCEKCRAVLASDDGDEESSLEGAAAGELVYDRPYEYGCAAEVLALDPVAKRDFSALERGLPPVSPARTEPGDRMQYLQVPPLRRFSHDETDLWTSSQVAAYLQRWGAGGEVAGLARLLAPRRDRPRHGFVPCPEEQLAYRHRRRSADSLASLLHVPGEGLRLADLRGLGGEEGATGSPGRSASVALLPVAAPQQAGLLSAFPLATLQHEPRALPGPPGALAVPGPRLAPEDPARLFAPRPAERCGGRALRPGLGDGGRGSSSSLLSSPSASSGYVTFLSGSIGSAS
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651543..651806,651897..652363,652504..652933,653078..653186,653263..653447,653516..654142)
location: region:651543-654142:1
so has part: feature:651543-651806:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:653078-653186:1:exon
so has part: feature:653263-653447:1:exon
so has part: feature:653516-654142:1:exon

XP_040389534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651543-651806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653078-653186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653263-653447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:653516-654142:1:exon

GPR153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GPR153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 153 isoform X4
translation: MRLVGAVRGCAPWADPAGGVPDPRASRWPARHGAVGSFPLRGRGGCVSSAVAASLLLLPEESNYSCETAVPPLHPLTCPCRRPSGTSLVLGSAAPRTSLDGPWCALGCLRLRPRSASPMVPRPSTMRDEQRLPGNAVAWLACAGVSLLANAWGILSISAKQKKWKPLEFLLCSLAGTHILNTTIPITTYAVVQLRRRRSGYEWNEGLCKVFVSTFYTLTLVTCFSVTSLSYHRMWMVRWPVNYRLSNTRKQAVHTVMGIWMVSFILSTLPAVGWHDTTERFYARDCRFVVTEIGLGFGVCFLLLIGGSMAVGAVCIAIALFHTIWGRRGPDASRNRFHVPTIVVEDAQGKRRSSIDGSEPIKTSLQITYLVTVIVLIYDVLMGFPVLVVSAASLRSDASSDWMVLCLIWCSLAQSLLLPLFLWACDRYRADPRAVCEKCRAVLASDDGDEGGKAAWRVLRLASWCTTAPTSTAARPRSWRWTPSPSVTSRRWSGACPQ
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651543..651806,651897..652363,652504..652933,652997..653191,653263..653403)
location: region:651543-653403:1
so has part: feature:651543-651806:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:652997-653191:1:exon
so has part: feature:653263-653403:1:exon

XP_040389536.1
type: Protein
SIO_000068: ncbiprotein

position:653403:1
position: 653403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651543-651806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652997-653191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653263-653403:1:exon

GPR153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GPR153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 153 isoform X5
translation: MRLVGAVRGCAPWADPAGGVPDPRASRWPARHGAVGSFPLRGRGGCVSSAVAASLLLLPEESNYSCETAVPPLHPLTCPCRRPSGTSLVLGSAAPRTSLDGPWCALGCLRLRPRSASPMVPRPSTMRDEQRLPGNAVAWLACAGVSLLANAWGILSISAKQKKWKPLEFLLCSLAGTHILNTTIPITTYAVVQLRRRRSGYEWNEGLCKVFVSTFYTLTLVTCFSVTSLSYHRMWMVRWPVNYRLSNTRKQAVHTVMGIWMVSFILSTLPAVGWHDTTERFYARDCRFVVTEIGLGFGVCFLLLIGGSMAVGAVCIAIALFHTIWGRRGPDASRNRFHVPTIVVEDAQGKRRSSIDGSEPIKTSLQITYLVTVIVLIYDVLMGFPVLVVSAASLRSDASSDWMVLCLIWCSLAQSLLLPLFLWACDRYRADPRAVCEKCRAVLASDDGDEAAWRVLRLASWCTTAPTSTAARPRSWRWTPSPSVTSRRWSGACPQ
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651543..651806,651897..652363,652504..652933,652997..653186,653267..653403)
location: region:651543-653403:1
so has part: feature:651543-651806:1:exon
so has part: feature:651897-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:652997-653186:1:exon
so has part: feature:653267-653403:1:exon

XP_040389537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651543-651806:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651897-652363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652997-653186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653267-653403:1:exon

GPR153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GPR153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 153 isoform X3
translation: MVPRPSTMRDEQRLPGNAVAWLACAGVSLLANAWGILSISAKQKKWKPLEFLLCSLAGTHILNTTIPITTYAVVQLRRRRSGYEWNEGLCKVFVSTFYTLTLVTCFSVTSLSYHRMWMVRWPVNYRLSNTRKQAVHTVMGIWMVSFILSTLPAVGWHDTTERFYARDCRFVVTEIGLGFGVCFLLLIGGSMAVGAVCIAIALFHTIWGRRGPDASRNRFHVPTIVVEDAQGKRRSSIDGSEPIKTSLQITYLVTVIVLIYDVLMGFPVLVVSAASLRSDASSDWMVLCLIWCSLAQSLLLPLFLWACDRYRADPRAVCEKCRAVLASDDGDEESSLEGAAAGELVYDRPYEYGCAAEVLALDPVAKRDFSALERGLPPVSPARTEPGDRMQYLQVPPLRRFSHDETDLWTSSQVAAYLQRWGAGGEVAGLARLLAPRRDRPRHGFVPCPEEQLAYRHRRRSADSLASLLHVPGEGLRLADLRGLGGEEGATGSPGRSASVALLPVAAPQQAGLLSAFPLATLQHEPRALPGPPGALAVPGPRLAPEDPARLFAPRPAERCGGRALRPGLGDGGRGSSSSLLSSPSASSGYVTFLSGSIGSAS
SIO_010081: GPR153
subclass of: SO_0000673
so part of: GPR153
location: join(651987..652363,652504..652933,652997..653186,653263..653447,653516..654142)
location: region:651987-654142:1
so has part: feature:651987-652363:1:exon
so has part: feature:652504-652933:1:exon
so has part: feature:652997-653186:1:exon
so has part: feature:653263-653447:1:exon
so has part: feature:653516-654142:1:exon

XP_040389535.1
type: Protein
SIO_000068: ncbiprotein

position:651987:1
position: 651987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651987-652363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652504-652933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652997-653186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653263-653447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653516-654142:1:exon

ICMT
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ICMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 654719..659192
location: region:654719-659192:1
so has part: feature:654719-659192:1:exon
subclass of: SO_0000010

121058269
type: Gene
SIO_000068: ncbigene

position:654719:1
position: 654719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659192:1
position: 659192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654719-659192:1:exon

ICMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ICMT
product: isoprenylcysteine carboxyl methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533621.1
SIO_010081: ICMT
subclass of: SO_0000673
so part of: ICMT
location: join(654719..654957,655040..655128,655593..655762,656244..656461,657380..659192)
location: region:654719-659192:1
so has part: feature:654719-654957:1:exon
so has part: feature:655040-655128:1:exon
so has part: feature:655593-655762:1:exon
so has part: feature:656244-656461:1:exon
so has part: feature:657380-659192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654719-654957:1:exon

position:654957:1
position: 654957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655040-655128:1:exon

position:655040:1
position: 655040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655128:1
position: 655128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:655593-655762:1:exon

position:655593:1
position: 655593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655762:1
position: 655762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:656244-656461:1:exon

position:656244:1
position: 656244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656461:1
position: 656461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:657380-659192:1:exon

position:657380:1
position: 657380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ICMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ICMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-S-isoprenylcysteine O-methyltransferase
translation: MAAAAAAGRWRRGRLGREARASLAAFLLGASVAALPLALGSPPALLAAPGLRGRLALALHVAAVNGALLLLYPRPLYKIAVRAGFLGFAFGCGLLLSAGRSAWRHFGWYVCSLSLFHYSEYLVTAINNPRSLSLDSFLLNHSFEYNLAALSSWVEFTLEKLLVPEMKQITWLSTVGLLMVIFGDCLRKAAMLTAGSNFNHIVQNEKSDTHTLVTSGVYGWFRHPSYVGWFYWSIGTQVLLCNPICVVGYTLASWRFFRERIEEEEITLIHFFGEEYLEYKKKVPSGLPFIKGVKVEL
SIO_010081: ICMT
subclass of: SO_0000673
so part of: ICMT
location: join(654724..654957,655040..655128,655593..655762,656244..656461,657380..657562)
location: region:654724-657562:1
so has part: feature:654724-654957:1:exon
so has part: feature:655040-655128:1:exon
so has part: feature:655593-655762:1:exon
so has part: feature:656244-656461:1:exon
so has part: feature:657380-657562:1:exon

XP_040389555.1
type: Protein
SIO_000068: ncbiprotein

position:654724:1
position: 654724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657562:1
position: 657562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654724-654957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655040-655128:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:655593-655762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656244-656461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657380-657562:1:exon

RNF207
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RNF207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(659313..665270)
location: region:659313-665270:-1
so has part: feature:659313-665270:-1:exon
subclass of: SO_0000010

121058268
type: Gene
SIO_000068: ncbigene

position:659313:-1
position: 659313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665270:-1
position: 665270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659313-665270:-1:exon

RNF207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RNF207
product: ring finger protein 207
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533620.1
SIO_010081: RNF207
subclass of: SO_0000673
so part of: RNF207
location: complement(join(659313..660204,660520..660600,660687..660804,660877..660928,661005..661190,661279..661468,663013..663134,663236..663304,663412..663480,663602..663674,663862..663908,664029..664154,664231..664306,664380..664461,664526..664670,664754..664886,665013..665270))
location: region:659313-665270:-1
so has part: feature:665013-665270:-1:exon
so has part: feature:664754-664886:-1:exon
so has part: feature:664526-664670:-1:exon
so has part: feature:664380-664461:-1:exon
so has part: feature:664231-664306:-1:exon
so has part: feature:664029-664154:-1:exon
so has part: feature:663862-663908:-1:exon
so has part: feature:663602-663674:-1:exon
so has part: feature:663412-663480:-1:exon
so has part: feature:663236-663304:-1:exon
so has part: feature:663013-663134:-1:exon
so has part: feature:661279-661468:-1:exon
so has part: feature:661005-661190:-1:exon
so has part: feature:660877-660928:-1:exon
so has part: feature:660687-660804:-1:exon
so has part: feature:660520-660600:-1:exon
so has part: feature:659313-660204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:665013-665270:-1:exon

position:665013:-1
position: 665013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664754-664886:-1:exon

position:664754:-1
position: 664754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664886:-1
position: 664886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:664526-664670:-1:exon

position:664526:-1
position: 664526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664670:-1
position: 664670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:664380-664461:-1:exon

position:664380:-1
position: 664380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664461:-1
position: 664461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:664231-664306:-1:exon

position:664231:-1
position: 664231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664306:-1
position: 664306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:664029-664154:-1:exon

position:664029:-1
position: 664029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664154:-1
position: 664154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:663862-663908:-1:exon

position:663862:-1
position: 663862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663908:-1
position: 663908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:663602-663674:-1:exon

position:663602:-1
position: 663602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663674:-1
position: 663674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:663412-663480:-1:exon

position:663412:-1
position: 663412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663480:-1
position: 663480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:663236-663304:-1:exon

position:663236:-1
position: 663236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663304:-1
position: 663304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:663013-663134:-1:exon

position:663013:-1
position: 663013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663134:-1
position: 663134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:661279-661468:-1:exon

position:661279:-1
position: 661279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661468:-1
position: 661468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:661005-661190:-1:exon

position:661005:-1
position: 661005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661190:-1
position: 661190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:660877-660928:-1:exon

position:660877:-1
position: 660877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660928:-1
position: 660928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:660687-660804:-1:exon

position:660687:-1
position: 660687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660804:-1
position: 660804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:660520-660600:-1:exon

position:660520:-1
position: 660520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660600:-1
position: 660600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:659313-660204:-1:exon

position:660204:-1
position: 660204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RNF207
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RING finger protein 207
translation: MAGGIFSPLGSCSELEKGAWHPLVCLLCHEPFQHPCLLDCYHNFCASCCAGRAADGRLRCPLCGHPSVVRGGTGLPPVDRLLQFLVDSSADGEEDVQCANCDRRCAKADLDAMCFCNTCSQPLCAPCREETHRAKVFARHEIVSLSKRTKDIHKKCPLHEEPYIMFSTEKKSMLCINCFRDMQGESRAHCIDIETAYVQGCEKLDQAVMAVKELQTSTREAIILLKAMIEEVRNSASQEETAINALFSGMQEQLSERKKALLKAVQSQHEEKEKAFKEQLAHLASLLPTLQVHLVICSAFLSSANKAEFLDLGYQLMERLQRIVKLPHRLRPAQTSKINTEYRAEFARCLEPLLMLTPRRSVVGSAGGIGPGIAGTNMIPVGQSSKTLIVPGCPPSGDKMSTGSMVRKPTLHRYISTKVLLAEGRETPFAEHCRNYENTYRMLQTEIQGLKDQVQELHRDLTKHHSLIRTEIMSEILQKSLQMDVQIAAHYSSVEMMRSVFEEVWEETYQRVANEQEIYEAQLHDLLQLRQENSCLTTITKQIAPYVRSIAKVKERLEPRLQEPREPKDEHTQTLLRIDDNSEAAHRDGSPGGKESRERALGSRGGGRTPTLAPEDPLLKNEERCRSKQKSGTESTAREDPGASS
SIO_010081: RNF207
subclass of: SO_0000673
so part of: RNF207
location: complement(join(660027..660204,660520..660600,660687..660804,660877..660928,661005..661190,661279..661468,663013..663134,663236..663304,663412..663480,663602..663674,663862..663908,664029..664154,664231..664306,664380..664461,664526..664670,664754..664886,665013..665205))
location: region:660027-665205:-1
so has part: feature:665013-665205:-1:exon
so has part: feature:664754-664886:-1:exon
so has part: feature:664526-664670:-1:exon
so has part: feature:664380-664461:-1:exon
so has part: feature:664231-664306:-1:exon
so has part: feature:664029-664154:-1:exon
so has part: feature:663862-663908:-1:exon
so has part: feature:663602-663674:-1:exon
so has part: feature:663412-663480:-1:exon
so has part: feature:663236-663304:-1:exon
so has part: feature:663013-663134:-1:exon
so has part: feature:661279-661468:-1:exon
so has part: feature:661005-661190:-1:exon
so has part: feature:660877-660928:-1:exon
so has part: feature:660687-660804:-1:exon
so has part: feature:660520-660600:-1:exon
so has part: feature:660027-660204:-1:exon

XP_040389554.1
type: Protein
SIO_000068: ncbiprotein

position:660027:-1
position: 660027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665205:-1
position: 665205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665013-665205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664754-664886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664526-664670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664380-664461:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664231-664306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:664029-664154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663862-663908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:663602-663674:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663412-663480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:663236-663304:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:663013-663134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661279-661468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:661005-661190:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:660877-660928:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:660687-660804:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:660520-660600:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:660027-660204:-1:exon

RPL22
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RPL22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 666078..669216
location: region:666078-669216:1
so has part: feature:666078-669216:1:exon
subclass of: SO_0000010

121058162
type: Gene
SIO_000068: ncbigene

position:666078:1
position: 666078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669216:1
position: 669216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666078-669216:1:exon

RPL22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RPL22
product: ribosomal protein L22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040533314.1
SIO_010081: RPL22
subclass of: SO_0000673
so part of: RPL22
location: join(666078..666231,666590..666694,667467..667591,669001..669216)
location: region:666078-669216:1
so has part: feature:666078-666231:1:exon
so has part: feature:666590-666694:1:exon
so has part: feature:667467-667591:1:exon
so has part: feature:669001-669216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666078-666231:1:exon

position:666231:1
position: 666231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666590-666694:1:exon

position:666590:1
position: 666590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666694:1
position: 666694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:667467-667591:1:exon

position:667467:1
position: 667467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667591:1
position: 667591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:669001-669216:1:exon

position:669001:1
position: 669001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RPL22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L22
translation: MAPVKKPAAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEEED
SIO_010081: RPL22
subclass of: SO_0000673
so part of: RPL22
location: join(666220..666231,666590..666694,667467..667591,669001..669145)
location: region:666220-669145:1
so has part: feature:666220-666231:1:exon
so has part: feature:666590-666694:1:exon
so has part: feature:667467-667591:1:exon
so has part: feature:669001-669145:1:exon

XP_040389248.1
type: Protein
SIO_000068: ncbiprotein

position:666220:1
position: 666220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669145:1
position: 669145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666220-666231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666590-666694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667467-667591:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669001-669145:1:exon

CHD5
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 669257..705518
location: region:669257-705518:1
so has part: feature:669257-705518:1:exon
subclass of: SO_0000010

121058160
type: Gene
SIO_000068: ncbigene

position:669257:1
position: 669257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705518:1
position: 705518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669257-705518:1:exon

CHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHD5
product: chromodomain helicase DNA binding protein 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533305.1
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669257..669388,671173..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,685968..686018,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696921,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704247,704433..705518)
location: region:669257-705518:1
so has part: feature:669257-669388:1:exon
so has part: feature:671173-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:685968-686018:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696921:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704247:1:exon
so has part: feature:704433-705518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669257-669388:1:exon

position:669388:1
position: 669388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671173-671303:1:exon

position:671173:1
position: 671173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671303:1
position: 671303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

position:675023:1
position: 675023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675202:1
position: 675202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

position:676321:1
position: 676321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676439:1
position: 676439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

position:676980:1
position: 676980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677218:1
position: 677218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

position:678178:1
position: 678178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678302:1
position: 678302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

position:680351:1
position: 680351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680474:1
position: 680474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

position:682286:1
position: 682286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682452:1
position: 682452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

position:683228:1
position: 683228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683446:1
position: 683446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

position:684507:1
position: 684507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684713:1
position: 684713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

position:684800:1
position: 684800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685011:1
position: 685011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:685968-686018:1:exon

position:685968:1
position: 685968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686018:1
position: 686018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:687332-687463:1:exon

position:687332:1
position: 687332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687463:1
position: 687463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:688062-688170:1:exon

position:688062:1
position: 688062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688170:1
position: 688170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:688712-688903:1:exon

position:688712:1
position: 688712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688903:1
position: 688903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:688992-689192:1:exon

position:688992:1
position: 688992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689192:1
position: 689192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:689591-689728:1:exon

position:689591:1
position: 689591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689728:1
position: 689728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:690448-690569:1:exon

position:690448:1
position: 690448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690569:1
position: 690569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:691041-691214:1:exon

position:691041:1
position: 691041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691214:1
position: 691214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:691777-691918:1:exon

position:691777:1
position: 691777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691918:1
position: 691918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:692128-692259:1:exon

position:692128:1
position: 692128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692259:1
position: 692259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:692823-692940:1:exon

position:692823:1
position: 692823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692940:1
position: 692940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:693460-693584:1:exon

position:693460:1
position: 693460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693584:1
position: 693584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:694563-694794:1:exon

position:694563:1
position: 694563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694794:1
position: 694794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:694885-695010:1:exon

position:694885:1
position: 694885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695010:1
position: 695010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:695123-695295:1:exon

position:695123:1
position: 695123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695295:1
position: 695295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:696205-696379:1:exon

position:696205:1
position: 696205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696379:1
position: 696379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:696829-696921:1:exon

position:696829:1
position: 696829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696921:1
position: 696921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:697428-697516:1:exon

position:697428:1
position: 697428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697516:1
position: 697516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:697684-697817:1:exon

position:697684:1
position: 697684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697817:1
position: 697817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:698015-698159:1:exon

position:698015:1
position: 698015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698159:1
position: 698159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:699793-699952:1:exon

position:699793:1
position: 699793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699952:1
position: 699952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:700117-700196:1:exon

position:700117:1
position: 700117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700196:1
position: 700196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:700694-700823:1:exon

position:700694:1
position: 700694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700823:1
position: 700823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:701515-701604:1:exon

position:701515:1
position: 701515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701604:1
position: 701604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:702001-702138:1:exon

position:702001:1
position: 702001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702138:1
position: 702138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:702334-702442:1:exon

position:702334:1
position: 702334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702442:1
position: 702442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:702645-702777:1:exon

position:702645:1
position: 702645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702777:1
position: 702777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:703263-703458:1:exon

position:703263:1
position: 703263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703458:1
position: 703458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:703599-703762:1:exon

position:703599:1
position: 703599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703762:1
position: 703762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:703966-704080:1:exon

position:703966:1
position: 703966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704080:1
position: 704080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:704197-704247:1:exon

position:704197:1
position: 704197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704247:1
position: 704247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:704433-705518:1:exon

position:704433:1
position: 704433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHD5
product: chromodomain helicase DNA binding protein 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533306.1
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
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position:704436:1
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CHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHD5
product: chromodomain helicase DNA binding protein 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533309.1
SIO_010081: CHD5
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CHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHD5
product: chromodomain helicase DNA binding protein 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040533310.1
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
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SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:704197-704247:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:704433-705518:1:exon

CHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHD5
product: chromodomain helicase DNA binding protein 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040533311.1
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669257..669388,671173..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696915,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704247,704433..705518)
location: region:669257-705518:1
so has part: feature:669257-669388:1:exon
so has part: feature:671173-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696915:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704247:1:exon
so has part: feature:704433-705518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669257-669388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671173-671303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696829-696915:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:704197-704247:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:704433-705518:1:exon

CHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHD5
product: chromodomain helicase DNA binding protein 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533307.1
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669257..669388,671176..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,685968..686018,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696921,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704247,704433..705518)
location: region:669257-705518:1
so has part: feature:669257-669388:1:exon
so has part: feature:671176-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:685968-686018:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696921:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704247:1:exon
so has part: feature:704433-705518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669257-669388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671176-671303:1:exon

position:671176:1
position: 671176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685968-686018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:696829-696921:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:704197-704247:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:704433-705518:1:exon

CHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 5 isoform X1
translation: MRGPAAGEELPEEADNDEDVSEEDDGVLEGLDEFFPEEQVAVQKKKKSKKLKDSKAAKIKRRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKDKKTKRKKKDEEDDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSALPAVIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWTWKEPPAPLPSTLPAPDAELPLPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHRSFVPLRSHAAHLHSHQSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPVPASPAHMHPGPLTLAEKIETQLGFQEEKEQVEQKPKKVSDSQVPASAEKVESEEHQESCESKEKLKEEKQEEGEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDTKVEEKEQSETQQNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669325..669388,671173..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,685968..686018,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696921,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704204)
location: region:669325-704204:1
so has part: feature:669325-669388:1:exon
so has part: feature:671173-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:685968-686018:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696921:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704204:1:exon

XP_040389239.1
type: Protein
SIO_000068: ncbiprotein

position:669325:1
position: 669325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704204:1
position: 704204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669325-669388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671173-671303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685968-686018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:696829-696921:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:704197-704204:1:exon

CHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 5 isoform X1
translation: MRGPAAGEELPEEADNDEDVSEEDDGVLEGLDEFFPEEQVAVQKKKKSKKLKDSKAAKIKRRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKDKKTKRKKKDEEDDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSALPAVIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWTWKEPPAPLPSTLPAPDAELPLPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHRSFVPLRSHAAHLHSHQSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPVPASPAHMHPGPLTLAEKIETQLGFQEEKEQVEQKPKKVSDSQVPASAEKVESEEHQESCESKEKLKEEKQEEGEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDTKVEEKEQSETQQNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669325..669388,671173..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,685968..686018,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696921,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704204)
location: region:669325-704204:1
so has part: feature:669325-669388:1:exon
so has part: feature:671173-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:685968-686018:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696921:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704204:1:exon

XP_040389240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669325-669388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671173-671303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685968-686018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:696829-696921:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:704197-704204:1:exon

CHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 5 isoform X3
translation: MRGPAAGEELPEEADNDEDVSEEDDGVLEGLDEFFPEEQVAVQKKKKSKKLKDSKAAKIKRRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKDKKTKRKKKDEEDDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSALPAVIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWTWKEPPAPLPSTLPAPDAELPLPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHRSFVPLRSHAAHLHSHQSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPVPASPAHMHPGPLTLAEKIETQLGFQEEKEQVEQKPKKVSDSQVPASAEKVESEEHQESCESKEKLKEEKQEEGEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDTKVEEKEQSETQQNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669325..669388,671173..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,685968..686018,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696915,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704204)
location: region:669325-704204:1
so has part: feature:669325-669388:1:exon
so has part: feature:671173-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:685968-686018:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696915:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704204:1:exon

XP_040389243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669325-669388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671173-671303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685968-686018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:696829-696915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:704197-704204:1:exon

CHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 5 isoform X4
translation: MRGPAAGEELPEEADNDEDVSEEDDGVLEGLDEFFPEEQVAVQKKKKSKKLKDSKAAKIKRRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKDKKTKRKKKDEEDDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSALPAVIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWTWKEPPAPLPSTLPAPDAELPLPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPVPASPAHMHPGPLTLAEKIETQLGFQEEKEQVEQKPKKVSDSQVPASAEKVESEEHQESCESKEKLKEEKQEEGEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDTKVEEKEQSETQQNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669325..669388,671173..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696921,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704204)
location: region:669325-704204:1
so has part: feature:669325-669388:1:exon
so has part: feature:671173-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696921:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704204:1:exon

XP_040389244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669325-669388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671173-671303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696829-696921:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:704197-704204:1:exon

CHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 5 isoform X5
translation: MRGPAAGEELPEEADNDEDVSEEDDGVLEGLDEFFPEEQVAVQKKKKSKKLKDSKAAKIKRRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKDKKTKRKKKDEEDDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSALPAVIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWTWKEPPAPLPSTLPAPDAELPLPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPVPASPAHMHPGPLTLAEKIETQLGFQEEKEQVEQKPKKVSDSQVPASAEKVESEEHQESCESKEKLKEEKQEEGEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDTKVEEKEQSETQQNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669325..669388,671173..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696915,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704204)
location: region:669325-704204:1
so has part: feature:669325-669388:1:exon
so has part: feature:671173-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696915:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704204:1:exon

XP_040389245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669325-669388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671173-671303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696829-696915:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:704197-704204:1:exon

CHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 5 isoform X2
translation: MRGPAAGEELPEEADNDEDVSEDDGVLEGLDEFFPEEQVAVQKKKKSKKLKDSKAAKIKRRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKKKKKKLKEKKDKKTKRKKKDEEDDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSALPAVIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWTWKEPPAPLPSTLPAPDAELPLPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHRSFVPLRSHAAHLHSHQSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPVPASPAHMHPGPLTLAEKIETQLGFQEEKEQVEQKPKKVSDSQVPASAEKVESEEHQESCESKEKLKEEKQEEGEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDTKVEEKEQSETQQNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(669325..669388,671176..671303,675023..675202,676321..676439,676980..677218,678178..678302,680351..680474,682286..682452,683228..683446,684507..684713,684800..685011,685968..686018,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696921,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704204)
location: region:669325-704204:1
so has part: feature:669325-669388:1:exon
so has part: feature:671176-671303:1:exon
so has part: feature:675023-675202:1:exon
so has part: feature:676321-676439:1:exon
so has part: feature:676980-677218:1:exon
so has part: feature:678178-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:685968-686018:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696921:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704204:1:exon

XP_040389241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:669325-669388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671176-671303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675023-675202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676321-676439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676980-677218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678178-678302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685968-686018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:696829-696921:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:704197-704204:1:exon

CHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CHD5
product: chromodomain helicase DNA binding protein 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040533312.1
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(678287..678302,680351..680474,682022..682089,682286..682452,683228..683446,684507..684713,684800..685011,685968..686018,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696921,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704247,704433..705518)
location: region:678287-705518:1
so has part: feature:678287-678302:1:exon
so has part: feature:680351-680474:1:exon
so has part: feature:682022-682089:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:685968-686018:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696921:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704247:1:exon
so has part: feature:704433-705518:1:exon

position:678287:1
position: 678287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678287-678302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680351-680474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682022-682089:1:exon

position:682022:1
position: 682022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682089:1
position: 682089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685968-686018:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:696829-696921:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:704197-704247:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:704433-705518:1:exon

CHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 5 isoform X6
translation: MIQCGEKDRVEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEDEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWTWKEPPAPLPSTLPAPDAELPLPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHRSFVPLRSHAAHLHSHQSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPVPASPAHMHPGPLTLAEKIETQLGFQEEKEQVEQKPKKVSDSQVPASAEKVESEEHQESCESKEKLKEEKQEEGEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDTKVEEKEQSETQQNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(682062..682089,682286..682452,683228..683446,684507..684713,684800..685011,685968..686018,687332..687463,688062..688170,688712..688903,688992..689192,689591..689728,690448..690569,691041..691214,691777..691918,692128..692259,692823..692940,693460..693584,694563..694794,694885..695010,695123..695295,696205..696379,696829..696921,697428..697516,697684..697817,698015..698159,699793..699952,700117..700196,700694..700823,701515..701604,702001..702138,702334..702442,702645..702777,703263..703458,703599..703762,703966..704080,704197..704204)
location: region:682062-704204:1
so has part: feature:682062-682089:1:exon
so has part: feature:682286-682452:1:exon
so has part: feature:683228-683446:1:exon
so has part: feature:684507-684713:1:exon
so has part: feature:684800-685011:1:exon
so has part: feature:685968-686018:1:exon
so has part: feature:687332-687463:1:exon
so has part: feature:688062-688170:1:exon
so has part: feature:688712-688903:1:exon
so has part: feature:688992-689192:1:exon
so has part: feature:689591-689728:1:exon
so has part: feature:690448-690569:1:exon
so has part: feature:691041-691214:1:exon
so has part: feature:691777-691918:1:exon
so has part: feature:692128-692259:1:exon
so has part: feature:692823-692940:1:exon
so has part: feature:693460-693584:1:exon
so has part: feature:694563-694794:1:exon
so has part: feature:694885-695010:1:exon
so has part: feature:695123-695295:1:exon
so has part: feature:696205-696379:1:exon
so has part: feature:696829-696921:1:exon
so has part: feature:697428-697516:1:exon
so has part: feature:697684-697817:1:exon
so has part: feature:698015-698159:1:exon
so has part: feature:699793-699952:1:exon
so has part: feature:700117-700196:1:exon
so has part: feature:700694-700823:1:exon
so has part: feature:701515-701604:1:exon
so has part: feature:702001-702138:1:exon
so has part: feature:702334-702442:1:exon
so has part: feature:702645-702777:1:exon
so has part: feature:703263-703458:1:exon
so has part: feature:703599-703762:1:exon
so has part: feature:703966-704080:1:exon
so has part: feature:704197-704204:1:exon

XP_040389246.1
type: Protein
SIO_000068: ncbiprotein

position:682062:1
position: 682062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682062-682089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682286-682452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683228-683446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684507-684713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:684800-685011:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685968-686018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:687332-687463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:688062-688170:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688712-688903:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:688992-689192:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:689591-689728:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:690448-690569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:691041-691214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:691777-691918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:692128-692259:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:692823-692940:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:693460-693584:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:694563-694794:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:694885-695010:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:695123-695295:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:696205-696379:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:696829-696921:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:697428-697516:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:697684-697817:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:698015-698159:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:699793-699952:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:700117-700196:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:700694-700823:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:701515-701604:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:702001-702138:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:702334-702442:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:702645-702777:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:703263-703458:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:703599-703762:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:703966-704080:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:704197-704204:1:exon

KCNAB2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: KCNAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(707145..727812)
location: region:707145-727812:-1
so has part: feature:707145-727812:-1:exon
subclass of: SO_0000010

121058161
type: Gene
SIO_000068: ncbigene

position:707145:-1
position: 707145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727812:-1
position: 727812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707145-727812:-1:exon

KCNAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KCNAB2
product: potassium voltage-gated channel subfamily A regulatory beta subunit 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040533313.1
SIO_010081: KCNAB2
subclass of: SO_0000673
so part of: KCNAB2
location: complement(join(707145..707846,708045..708133,708204..708324,708597..708692,708787..708907,709052..709137,712336..712422,712522..712565,712646..712690,712896..712940,714871..714950,715167..715204,715925..715968,726417..726458,726796..726915,727679..727812))
location: region:707145-727812:-1
so has part: feature:727679-727812:-1:exon
so has part: feature:726796-726915:-1:exon
so has part: feature:726417-726458:-1:exon
so has part: feature:715925-715968:-1:exon
so has part: feature:715167-715204:-1:exon
so has part: feature:714871-714950:-1:exon
so has part: feature:712896-712940:-1:exon
so has part: feature:712646-712690:-1:exon
so has part: feature:712522-712565:-1:exon
so has part: feature:712336-712422:-1:exon
so has part: feature:709052-709137:-1:exon
so has part: feature:708787-708907:-1:exon
so has part: feature:708597-708692:-1:exon
so has part: feature:708204-708324:-1:exon
so has part: feature:708045-708133:-1:exon
so has part: feature:707145-707846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727679-727812:-1:exon

position:727679:-1
position: 727679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726796-726915:-1:exon

position:726796:-1
position: 726796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726915:-1
position: 726915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:726417-726458:-1:exon

position:726417:-1
position: 726417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726458:-1
position: 726458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:715925-715968:-1:exon

position:715925:-1
position: 715925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715968:-1
position: 715968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:715167-715204:-1:exon

position:715167:-1
position: 715167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715204:-1
position: 715204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:714871-714950:-1:exon

position:714871:-1
position: 714871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714950:-1
position: 714950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:712896-712940:-1:exon

position:712896:-1
position: 712896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712940:-1
position: 712940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:712646-712690:-1:exon

position:712646:-1
position: 712646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712690:-1
position: 712690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:712522-712565:-1:exon

position:712522:-1
position: 712522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712565:-1
position: 712565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:712336-712422:-1:exon

position:712336:-1
position: 712336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712422:-1
position: 712422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:709052-709137:-1:exon

position:709052:-1
position: 709052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709137:-1
position: 709137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:708787-708907:-1:exon

position:708787:-1
position: 708787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708907:-1
position: 708907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:708597-708692:-1:exon

position:708597:-1
position: 708597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708692:-1
position: 708692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:708204-708324:-1:exon

position:708204:-1
position: 708204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708324:-1
position: 708324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:708045-708133:-1:exon

position:708045:-1
position: 708045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708133:-1
position: 708133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:707145-707846:-1:exon

position:707846:-1
position: 707846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KCNAB2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: voltage-gated potassium channel subunit beta-2
translation: MYPESTTDSPARLSLRQTGSPGMIYSARYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYRS
SIO_010081: KCNAB2
subclass of: SO_0000673
so part of: KCNAB2
location: complement(join(707757..707846,708045..708133,708204..708324,708597..708692,708787..708907,709052..709137,712336..712422,712522..712565,712646..712690,712896..712940,714871..714950,715167..715204,715925..715968,726417..726458,726796..726872))
location: region:707757-726872:-1
so has part: feature:726796-726872:-1:exon
so has part: feature:726417-726458:-1:exon
so has part: feature:715925-715968:-1:exon
so has part: feature:715167-715204:-1:exon
so has part: feature:714871-714950:-1:exon
so has part: feature:712896-712940:-1:exon
so has part: feature:712646-712690:-1:exon
so has part: feature:712522-712565:-1:exon
so has part: feature:712336-712422:-1:exon
so has part: feature:709052-709137:-1:exon
so has part: feature:708787-708907:-1:exon
so has part: feature:708597-708692:-1:exon
so has part: feature:708204-708324:-1:exon
so has part: feature:708045-708133:-1:exon
so has part: feature:707757-707846:-1:exon

XP_040389247.1
type: Protein
SIO_000068: ncbiprotein

position:707757:-1
position: 707757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726872:-1
position: 726872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726796-726872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:726417-726458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715925-715968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715167-715204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:714871-714950:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712896-712940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712646-712690:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712522-712565:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712336-712422:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709052-709137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:708787-708907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:708597-708692:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:708204-708324:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:708045-708133:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:707757-707846:-1:exon

NPHP4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 735499..768152
location: region:735499-768152:1
so has part: feature:735499-768152:1:exon
subclass of: SO_0000010

121058250
type: Gene
SIO_000068: ncbigene

position:735499:1
position: 735499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768152:1
position: 768152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735499-768152:1:exon

NPHP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NPHP4
product: nephrocystin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040533564.1
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(735499..735637,736646..736836,737879..738031,739876..740048,740353..740417,741778..741933,743690..743826,744469..744626,744719..744845,748393..748575,749450..749579,752814..752860,753917..754218,754362..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..768152)
location: region:735499-768152:1
so has part: feature:735499-735637:1:exon
so has part: feature:736646-736836:1:exon
so has part: feature:737879-738031:1:exon
so has part: feature:739876-740048:1:exon
so has part: feature:740353-740417:1:exon
so has part: feature:741778-741933:1:exon
so has part: feature:743690-743826:1:exon
so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:748393-748575:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754362-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-768152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:735499-735637:1:exon

position:735637:1
position: 735637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736646-736836:1:exon

position:736646:1
position: 736646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736836:1
position: 736836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:737879-738031:1:exon

position:737879:1
position: 737879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738031:1
position: 738031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:739876-740048:1:exon

position:739876:1
position: 739876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740048:1
position: 740048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:740353-740417:1:exon

position:740353:1
position: 740353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740417:1
position: 740417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:741778-741933:1:exon

position:741778:1
position: 741778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741933:1
position: 741933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:743690-743826:1:exon

position:743690:1
position: 743690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743826:1
position: 743826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:744469-744626:1:exon

position:744469:1
position: 744469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744626:1
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urn:…
SIO_000300: 9
SIO_000628: feature:744719-744845:1:exon

position:744719:1
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position:744845:1
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urn:…
SIO_000300: 10
SIO_000628: feature:748393-748575:1:exon

position:748393:1
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reference: sequence
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position:748575:1
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urn:…
SIO_000300: 11
SIO_000628: feature:749450-749579:1:exon

position:749450:1
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position:749579:1
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urn:…
SIO_000300: 12
SIO_000628: feature:752814-752860:1:exon

position:752814:1
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reference: sequence
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position:752860:1
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urn:…
SIO_000300: 13
SIO_000628: feature:753917-754218:1:exon

position:753917:1
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reference: sequence
type: ForwardStrandPosition
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position:754218:1
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urn:…
SIO_000300: 14
SIO_000628: feature:754362-754553:1:exon

position:754362:1
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position:754553:1
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urn:…
SIO_000300: 15
SIO_000628: feature:755199-755386:1:exon

position:755199:1
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position:755386:1
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urn:…
SIO_000300: 16
SIO_000628: feature:756747-756907:1:exon

position:756747:1
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reference: sequence
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position:756907:1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:757505-757685:1:exon

position:757505:1
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reference: sequence
type: ForwardStrandPosition
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position:757685:1
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urn:…
SIO_000300: 18
SIO_000628: feature:759820-759948:1:exon

position:759820:1
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reference: sequence
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position:759948:1
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urn:…
SIO_000300: 19
SIO_000628: feature:760075-760274:1:exon

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position:760274:1
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urn:…
SIO_000300: 20
SIO_000628: feature:760348-760574:1:exon

position:760348:1
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reference: sequence
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position:760574:1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:760780-760969:1:exon

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reference: sequence
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position:760969:1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:761264-761344:1:exon

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reference: sequence
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position:761344:1
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urn:…
SIO_000300: 23
SIO_000628: feature:761463-761619:1:exon

position:761463:1
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reference: sequence
type: ForwardStrandPosition
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position:761619:1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:762036-762121:1:exon

position:762036:1
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reference: sequence
type: ForwardStrandPosition
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position:762121:1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:763255-763340:1:exon

position:763255:1
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reference: sequence
type: ForwardStrandPosition
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position:763340:1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:763770-763941:1:exon

position:763770:1
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reference: sequence
type: ForwardStrandPosition
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position:763941:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:765404-765583:1:exon

position:765404:1
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reference: sequence
type: ForwardStrandPosition
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position:765583:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:767064-767207:1:exon

position:767064:1
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reference: sequence
type: ForwardStrandPosition
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position:767207:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:767501-768152:1:exon

position:767501:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPHP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NPHP4
product: nephrocystin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040533565.1
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(735602..735637,736646..736836,737879..738031,739876..740048,740353..740417,741778..741933,743690..743826,744469..744626,744719..744845,748393..748575,749450..749579,752814..752860,753917..754218,754368..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..768152)
location: region:735602-768152:1
so has part: feature:735602-735637:1:exon
so has part: feature:736646-736836:1:exon
so has part: feature:737879-738031:1:exon
so has part: feature:739876-740048:1:exon
so has part: feature:740353-740417:1:exon
so has part: feature:741778-741933:1:exon
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so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:748393-748575:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754368-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-768152:1:exon

position:735602:1
position: 735602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735602-735637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736646-736836:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:737879-738031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739876-740048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740353-740417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741778-741933:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:748393-748575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:754368-754553:1:exon

position:754368:1
position: 754368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:767501-768152:1:exon

NPHP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NPHP4
product: nephrocystin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040533566.1
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(735921..736836,737879..738031,739876..740048,740353..740417,741778..741933,743690..743826,744469..744626,744719..744845,749450..749579,752814..752860,753917..754218,754362..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..768152)
location: region:735921-768152:1
so has part: feature:735921-736836:1:exon
so has part: feature:737879-738031:1:exon
so has part: feature:739876-740048:1:exon
so has part: feature:740353-740417:1:exon
so has part: feature:741778-741933:1:exon
so has part: feature:743690-743826:1:exon
so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754362-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-768152:1:exon

position:735921:1
position: 735921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735921-736836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737879-738031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739876-740048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740353-740417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741778-741933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:754362-754553:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:767501-768152:1:exon

NPHP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-4 isoform X1
translation: MPRGRGDLLSIKMSEWERIFLQNLTVPPYSQRRRNIPKESTAFQCVLKYVEGTVITQRAAGGSAGVEFQLRLSLFDVAYHHFFGRTWRSSARTPRSAPQQRPRVVFNEAVYFHTSLNHPSIMAVVEVVATAQTPEGLCRDLSCGFGLVPLFDSRWDPTDLAVKDRVLKLYHGTPRALLHPLFQDPVEKNKYMTIMENSHLQYTLKPHPPLETIFHLLPENLLVSGLQKIPGLLPAHGDTSDCFLKPRLMKSVTCYLDKLSIRLYPSLEKFEEELLELLNSDRSLKVSARPAGSALSVQERRLRVGVHNGLRFVQAPQVAVLLPAAEVARGRPDGPPASVAGQALLLRSRLQLSEMVPHPAFGVCFQLEYVVCAAAGASSKAEAGSALGPAADMHAVRWALWSPFLGTDSSPVVLPLRGGARRSPGQALVFRAPADSENSEEVKQVASGTVQFHVSTDSEENLATSTDISSKARKESEKPPTPSLSPPSPLRLEVSPRGPGLSLSELSASPCGKGEPPLPRSSGAPVPRPRGTPRDTSVLRAPGTARAEPAVPWHVAGITHLEADLHPGSPDLDLSGSEQLRELPFAPAQAPIVAVGLPAGSSSTVCSRASLALLHASGFPEILDCNKEPVEIAEPLDSTSFSPQLEEADALQSNEIILQFLAFSRAPQDGVEGTWPRTVFLTFQFYHFPPVTTPRLQLVDMDNEKAARSAAPPQLLVQINKDGTPHTGAPGLQLKYMVDPAFLKPGEQRWFVCYLADHSLQIDIWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVATTEYEQDAVAVGRDALWHGAVRPVDVRVAVRGRLHLCLANVGHRCEETPRIPRRPSPSRARLVPSLDSVSSLRGGSLLSLHAGSGPRVSRARKLAEVDGELAATLCSHRPEASPASPRAPHEAADVRRRKLRRMALVRQQEDAGGSTPQRTGRHEQRLQHLRDLQVISAYRERTKSESITQMLSQAITATHTVYAVLGTAEFFEFALKNPYSVQHTVTIEFDHPELSVILDAREWRHFKELTKVATPLEEDMFHLRDDLRPQVYLRPKETVHIPFRYQTFSAEPAVAAVPGPAGLSAGDDAATTSWQPGAMQTKHIQVTFRVSGGKPIALLRVKVEPRPHVVDQTFRFYHPELTFLKKAIRLPPWHTLPGAPAGMPGGEPEMYVRCSDPNIICETKNMGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDAWLAAPLRIWQFYLHSLQRLDVSCTAGQLARLALPLRGTRALRKVKAFSSHPHELKVDPEGVFVLPPNGVLDLYVGVRPRRAGSRFIYLNLVDVEYHQLVSSWLVCVSCRQPLISKAFEITLPAGGGRGSNKRITYTNPYPTRRVYFLGTSRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQSTGEEEILIHINDHEDKNEETFCVKVVYQ
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(736666..736836,737879..738031,739876..740048,740353..740417,741778..741933,743690..743826,744469..744626,744719..744845,748393..748575,749450..749579,752814..752860,753917..754218,754362..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..767641)
location: region:736666-767641:1
so has part: feature:736666-736836:1:exon
so has part: feature:737879-738031:1:exon
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so has part: feature:753917-754218:1:exon
so has part: feature:754362-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
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so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-767641:1:exon

XP_040389498.1
type: Protein
SIO_000068: ncbiprotein

position:736666:1
position: 736666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767641:1
position: 767641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736666-736836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737879-738031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739876-740048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740353-740417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741778-741933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:748393-748575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:754362-754553:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:767501-767641:1:exon

NPHP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-4 isoform X2
translation: MPRGRGDLLSIKMSEWERIFLQNLTVPPYSQRRRNIPKESTAFQCVLKYVEGTVITQRAAGGSAGVEFQLRLSLFDVAYHHFFGRTWRSSARTPRSAPQQRPRVVFNEAVYFHTSLNHPSIMAVVEVVATAQTPEGLCRDLSCGFGLVPLFDSRWDPTDLAVKDRVLKLYHGTPRALLHPLFQDPVEKNKYMTIMENSHLQYTLKPHPPLETIFHLLPENLLVSGLQKIPGLLPAHGDTSDCFLKPRLMKSVTCYLDKLSIRLYPSLEKFEEELLELLNSDRSLKVSARPAGSALSVQERRLRVGVHNGLRFVQAPQVAVLLPAAEVARGRPDGPPASVAGQALLLRSRLQLSEMVPHPAFGVCFQLEYVVCAAAGASSKAEAGSALGPAADMHAVRWALWSPFLGTDSSPVVLPLRGGARRSPGQALVFRAPADSENSEEVKQVASGTVQFHVSTDSEENLATSTDISSKARKESEKPPTPSLSPPSPLRLEVSPRGPGLSLSELSASPCGKGEPPLPRSSGAPVPRPRGTPRDTSVLRAPGTARAEPAVPWHVAGITHLEADLHPGSPDLDLSGSEQLRELPFAPAQAPIVAVGLPAGSTVCSRASLALLHASGFPEILDCNKEPVEIAEPLDSTSFSPQLEEADALQSNEIILQFLAFSRAPQDGVEGTWPRTVFLTFQFYHFPPVTTPRLQLVDMDNEKAARSAAPPQLLVQINKDGTPHTGAPGLQLKYMVDPAFLKPGEQRWFVCYLADHSLQIDIWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVATTEYEQDAVAVGRDALWHGAVRPVDVRVAVRGRLHLCLANVGHRCEETPRIPRRPSPSRARLVPSLDSVSSLRGGSLLSLHAGSGPRVSRARKLAEVDGELAATLCSHRPEASPASPRAPHEAADVRRRKLRRMALVRQQEDAGGSTPQRTGRHEQRLQHLRDLQVISAYRERTKSESITQMLSQAITATHTVYAVLGTAEFFEFALKNPYSVQHTVTIEFDHPELSVILDAREWRHFKELTKVATPLEEDMFHLRDDLRPQVYLRPKETVHIPFRYQTFSAEPAVAAVPGPAGLSAGDDAATTSWQPGAMQTKHIQVTFRVSGGKPIALLRVKVEPRPHVVDQTFRFYHPELTFLKKAIRLPPWHTLPGAPAGMPGGEPEMYVRCSDPNIICETKNMGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDAWLAAPLRIWQFYLHSLQRLDVSCTAGQLARLALPLRGTRALRKVKAFSSHPHELKVDPEGVFVLPPNGVLDLYVGVRPRRAGSRFIYLNLVDVEYHQLVSSWLVCVSCRQPLISKAFEITLPAGGGRGSNKRITYTNPYPTRRVYFLGTSRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQSTGEEEILIHINDHEDKNEETFCVKVVYQ
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(736666..736836,737879..738031,739876..740048,740353..740417,741778..741933,743690..743826,744469..744626,744719..744845,748393..748575,749450..749579,752814..752860,753917..754218,754368..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..767641)
location: region:736666-767641:1
so has part: feature:736666-736836:1:exon
so has part: feature:737879-738031:1:exon
so has part: feature:739876-740048:1:exon
so has part: feature:740353-740417:1:exon
so has part: feature:741778-741933:1:exon
so has part: feature:743690-743826:1:exon
so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:748393-748575:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754368-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-767641:1:exon

XP_040389499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:736666-736836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737879-738031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739876-740048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740353-740417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741778-741933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:748393-748575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:754368-754553:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:767501-767641:1:exon

NPHP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-4 isoform X3
translation: MPRGRGDLLSIKMSEWERIFLQNLTVPPYSQRRRNIPKESTAFQCVLKYVEGTVITQRAAGGSAGVEFQLRLSLFDVAYHHFFGRTWRSSARTPRSAPQQRPRVVFNEAVYFHTSLNHPSIMAVVEVVATAQTPEGLCRDLSCGFGLVPLFDSRWDPTDLAVKDRVLKLYHGTPRALLHPLFQDPVEKNKYMTIMENSHLQYTLKPHPPLETIFHLLPENLLVSGLQKIPGLLPAHGDTSDCFLKPRLMKSVTCYLDKLSIRLYPSLEKFEEELLELLNSDRSLKVSARPAGSALSVQERRLRVGVHNGLRFVQAPQVAVLLPAAEVARGRPDGPPASVAGQALLLRSRLQLSEMVPHPAFGVCFQLEYVVCAAAGASSKVKQVASGTVQFHVSTDSEENLATSTDISSKARKESEKPPTPSLSPPSPLRLEVSPRGPGLSLSELSASPCGKGEPPLPRSSGAPVPRPRGTPRDTSVLRAPGTARAEPAVPWHVAGITHLEADLHPGSPDLDLSGSEQLRELPFAPAQAPIVAVGLPAGSSSTVCSRASLALLHASGFPEILDCNKEPVEIAEPLDSTSFSPQLEEADALQSNEIILQFLAFSRAPQDGVEGTWPRTVFLTFQFYHFPPVTTPRLQLVDMDNEKAARSAAPPQLLVQINKDGTPHTGAPGLQLKYMVDPAFLKPGEQRWFVCYLADHSLQIDIWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVATTEYEQDAVAVGRDALWHGAVRPVDVRVAVRGRLHLCLANVGHRCEETPRIPRRPSPSRARLVPSLDSVSSLRGGSLLSLHAGSGPRVSRARKLAEVDGELAATLCSHRPEASPASPRAPHEAADVRRRKLRRMALVRQQEDAGGSTPQRTGRHEQRLQHLRDLQVISAYRERTKSESITQMLSQAITATHTVYAVLGTAEFFEFALKNPYSVQHTVTIEFDHPELSVILDAREWRHFKELTKVATPLEEDMFHLRDDLRPQVYLRPKETVHIPFRYQTFSAEPAVAAVPGPAGLSAGDDAATTSWQPGAMQTKHIQVTFRVSGGKPIALLRVKVEPRPHVVDQTFRFYHPELTFLKKAIRLPPWHTLPGAPAGMPGGEPEMYVRCSDPNIICETKNMGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDAWLAAPLRIWQFYLHSLQRLDVSCTAGQLARLALPLRGTRALRKVKAFSSHPHELKVDPEGVFVLPPNGVLDLYVGVRPRRAGSRFIYLNLVDVEYHQLVSSWLVCVSCRQPLISKAFEITLPAGGGRGSNKRITYTNPYPTRRVYFLGTSRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQSTGEEEILIHINDHEDKNEETFCVKVVYQ
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(736666..736836,737879..738031,739876..740048,740353..740417,741778..741933,743690..743826,744469..744626,744719..744845,749450..749579,752814..752860,753917..754218,754362..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..767641)
location: region:736666-767641:1
so has part: feature:736666-736836:1:exon
so has part: feature:737879-738031:1:exon
so has part: feature:739876-740048:1:exon
so has part: feature:740353-740417:1:exon
so has part: feature:741778-741933:1:exon
so has part: feature:743690-743826:1:exon
so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754362-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-767641:1:exon

XP_040389500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:736666-736836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737879-738031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739876-740048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740353-740417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741778-741933:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:754362-754553:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:767501-767641:1:exon

NPHP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NPHP4
product: nephrocystin 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040533570.1
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(739957..740052,740353..740417,741778..741933,743690..743826,744469..744626,744719..744845,748393..748575,749450..749579,752814..752860,753917..754218,754362..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..768152)
location: region:739957-768152:1
so has part: feature:739957-740052:1:exon
so has part: feature:740353-740417:1:exon
so has part: feature:741778-741933:1:exon
so has part: feature:743690-743826:1:exon
so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:748393-748575:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754362-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-768152:1:exon

position:739957:1
position: 739957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739957-740052:1:exon

position:740052:1
position: 740052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:740353-740417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741778-741933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748393-748575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754362-754553:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767501-768152:1:exon

NPHP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NPHP4
product: nephrocystin 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040533567.1
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(740482..740576,741778..741933,743690..743826,744469..744626,744719..744845,748393..748575,749450..749579,752814..752860,753917..754218,754362..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..768152)
location: region:740482-768152:1
so has part: feature:740482-740576:1:exon
so has part: feature:741778-741933:1:exon
so has part: feature:743690-743826:1:exon
so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:748393-748575:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754362-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-768152:1:exon

position:740482:1
position: 740482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740482-740576:1:exon

position:740576:1
position: 740576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741778-741933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:748393-748575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754362-754553:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:767501-768152:1:exon

NPHP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-4 isoform X4
translation: MHGLCPRSAKQKRAFSFQALELHENKYMTIMENSHLQYTLKPHPPLETIFHLLPENLLVSGLQKIPGLLPAHGDTSDCFLKPRLMKSVTCYLDKLSIRLYPSLEKFEEELLELLNSDRSLKVSARPAGSALSVQERRLRVGVHNGLRFVQAPQVAVLLPAAEVARGRPDGPPASVAGQALLLRSRLQLSEMVPHPAFGVCFQLEYVVCAAAGASSKAEAGSALGPAADMHAVRWALWSPFLGTDSSPVVLPLRGGARRSPGQALVFRAPADSENSEEVKQVASGTVQFHVSTDSEENLATSTDISSKARKESEKPPTPSLSPPSPLRLEVSPRGPGLSLSELSASPCGKGEPPLPRSSGAPVPRPRGTPRDTSVLRAPGTARAEPAVPWHVAGITHLEADLHPGSPDLDLSGSEQLRELPFAPAQAPIVAVGLPAGSSSTVCSRASLALLHASGFPEILDCNKEPVEIAEPLDSTSFSPQLEEADALQSNEIILQFLAFSRAPQDGVEGTWPRTVFLTFQFYHFPPVTTPRLQLVDMDNEKAARSAAPPQLLVQINKDGTPHTGAPGLQLKYMVDPAFLKPGEQRWFVCYLADHSLQIDIWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVATTEYEQDAVAVGRDALWHGAVRPVDVRVAVRGRLHLCLANVGHRCEETPRIPRRPSPSRARLVPSLDSVSSLRGGSLLSLHAGSGPRVSRARKLAEVDGELAATLCSHRPEASPASPRAPHEAADVRRRKLRRMALVRQQEDAGGSTPQRTGRHEQRLQHLRDLQVISAYRERTKSESITQMLSQAITATHTVYAVLGTAEFFEFALKNPYSVQHTVTIEFDHPELSVILDAREWRHFKELTKVATPLEEDMFHLRDDLRPQVYLRPKETVHIPFRYQTFSAEPAVAAVPGPAGLSAGDDAATTSWQPGAMQTKHIQVTFRVSGGKPIALLRVKVEPRPHVVDQTFRFYHPELTFLKKAIRLPPWHTLPGAPAGMPGGEPEMYVRCSDPNIICETKNMGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDAWLAAPLRIWQFYLHSLQRLDVSCTAGQLARLALPLRGTRALRKVKAFSSHPHELKVDPEGVFVLPPNGVLDLYVGVRPRRAGSRFIYLNLVDVEYHQLVSSWLVCVSCRQPLISKAFEITLPAGGGRGSNKRITYTNPYPTRRVYFLGTSRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQSTGEEEILIHINDHEDKNEETFCVKVVYQ
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(740507..740576,741778..741933,743690..743826,744469..744626,744719..744845,748393..748575,749450..749579,752814..752860,753917..754218,754362..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..767641)
location: region:740507-767641:1
so has part: feature:740507-740576:1:exon
so has part: feature:741778-741933:1:exon
so has part: feature:743690-743826:1:exon
so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:748393-748575:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754362-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-767641:1:exon

XP_040389501.1
type: Protein
SIO_000068: ncbiprotein

position:740507:1
position: 740507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740507-740576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741778-741933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:748393-748575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754362-754553:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:767501-767641:1:exon

NPHP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-4 isoform X5
translation: MTIMENSHLQYTLKPHPPLETIFHLLPENLLVSGLQKIPGLLPAHGDTSDCFLKPRLMKSVTCYLDKLSIRLYPSLEKFEEELLELLNSDRSLKVSARPAGSALSVQERRLRVGVHNGLRFVQAPQVAVLLPAAEVARGRPDGPPASVAGQALLLRSRLQLSEMVPHPAFGVCFQLEYVVCAAAGASSKAEAGSALGPAADMHAVRWALWSPFLGTDSSPVVLPLRGGARRSPGQALVFRAPADSENSEEVKQVASGTVQFHVSTDSEENLATSTDISSKARKESEKPPTPSLSPPSPLRLEVSPRGPGLSLSELSASPCGKGEPPLPRSSGAPVPRPRGTPRDTSVLRAPGTARAEPAVPWHVAGITHLEADLHPGSPDLDLSGSEQLRELPFAPAQAPIVAVGLPAGSSSTVCSRASLALLHASGFPEILDCNKEPVEIAEPLDSTSFSPQLEEADALQSNEIILQFLAFSRAPQDGVEGTWPRTVFLTFQFYHFPPVTTPRLQLVDMDNEKAARSAAPPQLLVQINKDGTPHTGAPGLQLKYMVDPAFLKPGEQRWFVCYLADHSLQIDIWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVATTEYEQDAVAVGRDALWHGAVRPVDVRVAVRGRLHLCLANVGHRCEETPRIPRRPSPSRARLVPSLDSVSSLRGGSLLSLHAGSGPRVSRARKLAEVDGELAATLCSHRPEASPASPRAPHEAADVRRRKLRRMALVRQQEDAGGSTPQRTGRHEQRLQHLRDLQVISAYRERTKSESITQMLSQAITATHTVYAVLGTAEFFEFALKNPYSVQHTVTIEFDHPELSVILDAREWRHFKELTKVATPLEEDMFHLRDDLRPQVYLRPKETVHIPFRYQTFSAEPAVAAVPGPAGLSAGDDAATTSWQPGAMQTKHIQVTFRVSGGKPIALLRVKVEPRPHVVDQTFRFYHPELTFLKKAIRLPPWHTLPGAPAGMPGGEPEMYVRCSDPNIICETKNMGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDAWLAAPLRIWQFYLHSLQRLDVSCTAGQLARLALPLRGTRALRKVKAFSSHPHELKVDPEGVFVLPPNGVLDLYVGVRPRRAGSRFIYLNLVDVEYHQLVSSWLVCVSCRQPLISKAFEITLPAGGGRGSNKRITYTNPYPTRRVYFLGTSRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQSTGEEEILIHINDHEDKNEETFCVKVVYQ
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(741789..741933,743690..743826,744469..744626,744719..744845,748393..748575,749450..749579,752814..752860,753917..754218,754362..754553,755199..755386,756747..756907,757505..757685,759820..759948,760075..760274,760348..760574,760780..760969,761264..761344,761463..761619,762036..762121,763255..763340,763770..763941,765404..765583,767064..767207,767501..767641)
location: region:741789-767641:1
so has part: feature:741789-741933:1:exon
so has part: feature:743690-743826:1:exon
so has part: feature:744469-744626:1:exon
so has part: feature:744719-744845:1:exon
so has part: feature:748393-748575:1:exon
so has part: feature:749450-749579:1:exon
so has part: feature:752814-752860:1:exon
so has part: feature:753917-754218:1:exon
so has part: feature:754362-754553:1:exon
so has part: feature:755199-755386:1:exon
so has part: feature:756747-756907:1:exon
so has part: feature:757505-757685:1:exon
so has part: feature:759820-759948:1:exon
so has part: feature:760075-760274:1:exon
so has part: feature:760348-760574:1:exon
so has part: feature:760780-760969:1:exon
so has part: feature:761264-761344:1:exon
so has part: feature:761463-761619:1:exon
so has part: feature:762036-762121:1:exon
so has part: feature:763255-763340:1:exon
so has part: feature:763770-763941:1:exon
so has part: feature:765404-765583:1:exon
so has part: feature:767064-767207:1:exon
so has part: feature:767501-767641:1:exon

XP_040389504.1
type: Protein
SIO_000068: ncbiprotein

position:741789:1
position: 741789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741789-741933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743690-743826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744469-744626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744719-744845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748393-748575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749450-749579:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:752814-752860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753917-754218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754362-754553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:755199-755386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:756747-756907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:757505-757685:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:759820-759948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:760075-760274:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:760348-760574:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760780-760969:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:761264-761344:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:761463-761619:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:762036-762121:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763255-763340:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:763770-763941:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:765404-765583:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:767064-767207:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:767501-767641:1:exon

LOC121058311
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 773223..789636
location: region:773223-789636:1
so has part: feature:773223-789636:1:exon
subclass of: SO_0000011

121058311
type: Gene
SIO_000068: ncbigene

position:773223:1
position: 773223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789636:1
position: 789636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773223-789636:1:exon

LOC121058311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058311
product: uncharacterized LOC121058311, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005814164.1
SIO_010081: LOC121058311
subclass of: SO_0000673
so part of: LOC121058311
location: join(773223..773541,784989..785139,787251..787480,788304..789636)
location: region:773223-789636:1
so has part: feature:773223-773541:1:exon
so has part: feature:784989-785139:1:exon
so has part: feature:787251-787480:1:exon
so has part: feature:788304-789636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773223-773541:1:exon

position:773541:1
position: 773541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784989-785139:1:exon

position:784989:1
position: 784989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785139:1
position: 785139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:787251-787480:1:exon

position:787251:1
position: 787251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787480:1
position: 787480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:788304-789636:1:exon

position:788304:1
position: 788304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121058311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058311
product: uncharacterized LOC121058311, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814162.1
SIO_010081: LOC121058311
subclass of: SO_0000673
so part of: LOC121058311
location: join(783299..783543,784989..785139,787251..787480,788304..789636)
location: region:783299-789636:1
so has part: feature:783299-783543:1:exon
so has part: feature:784989-785139:1:exon
so has part: feature:787251-787480:1:exon
so has part: feature:788304-789636:1:exon

position:783299:1
position: 783299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783299-783543:1:exon

position:783543:1
position: 783543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784989-785139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787251-787480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788304-789636:1:exon

LOC121058311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058311
product: uncharacterized LOC121058311, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814163.1
SIO_010081: LOC121058311
subclass of: SO_0000673
so part of: LOC121058311
location: join(783507..783622,784989..785139,787251..787480,788304..789636)
location: region:783507-789636:1
so has part: feature:783507-783622:1:exon
so has part: feature:784989-785139:1:exon
so has part: feature:787251-787480:1:exon
so has part: feature:788304-789636:1:exon

position:783507:1
position: 783507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783507-783622:1:exon

position:783622:1
position: 783622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784989-785139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787251-787480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788304-789636:1:exon

LOC121058311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058311
product: uncharacterized LOC121058311, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005814160.1
SIO_010081: LOC121058311
subclass of: SO_0000673
so part of: LOC121058311
location: join(783647..785139,787251..787480,788304..789636)
location: region:783647-789636:1
so has part: feature:783647-785139:1:exon
so has part: feature:787251-787480:1:exon
so has part: feature:788304-789636:1:exon

position:783647:1
position: 783647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783647-785139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787251-787480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788304-789636:1:exon

LOC121058311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058311
product: uncharacterized LOC121058311, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814161.1
SIO_010081: LOC121058311
subclass of: SO_0000673
so part of: LOC121058311
location: join(783647..784063,784989..785139,787251..787480,788304..789636)
location: region:783647-789636:1
so has part: feature:783647-784063:1:exon
so has part: feature:784989-785139:1:exon
so has part: feature:787251-787480:1:exon
so has part: feature:788304-789636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:783647-784063:1:exon

position:784063:1
position: 784063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784989-785139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787251-787480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788304-789636:1:exon

LOC121058379
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(832952..838585)
location: region:832952-838585:-1
so has part: feature:832952-838585:-1:exon
subclass of: SO_0000011

121058379
type: Gene
SIO_000068: ncbigene

position:832952:-1
position: 832952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838585:-1
position: 838585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832952-838585:-1:exon

LOC121058379
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058379
product: uncharacterized LOC121058379
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005814182.1
SIO_010081: LOC121058379
subclass of: SO_0000673
so part of: LOC121058379
location: complement(join(832952..833590,837887..838128,838229..838585))
location: region:832952-838585:-1
so has part: feature:838229-838585:-1:exon
so has part: feature:837887-838128:-1:exon
so has part: feature:832952-833590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:838229-838585:-1:exon

position:838229:-1
position: 838229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837887-838128:-1:exon

position:837887:-1
position: 837887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838128:-1
position: 838128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:832952-833590:-1:exon

position:833590:-1
position: 833590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121058325
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121058325
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(839092..847799)
location: region:839092-847799:-1
so has part: feature:839092-847799:-1:exon
subclass of: SO_0000011

121058325
type: Gene
SIO_000068: ncbigene

position:839092:-1
position: 839092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847799:-1
position: 847799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839092-847799:-1:exon

LOC121058325
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121058325
product: uncharacterized LOC121058325, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005814171.1
SIO_010081: LOC121058325
subclass of: SO_0000673
so part of: LOC121058325
location: complement(join(839092..840994,841820..842031,843591..845932,846689..846855,847470..847799))
location: region:839092-847799:-1
so has part: feature:847470-847799:-1:exon
so has part: feature:846689-846855:-1:exon
so has part: feature:843591-845932:-1:exon
so has part: feature:841820-842031:-1:exon
so has part: feature:839092-840994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:847470-847799:-1:exon

position:847470:-1
position: 847470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:846689-846855:-1:exon

position:846689:-1
position: 846689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846855:-1
position: 846855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:843591-845932:-1:exon

position:843591:-1
position: 843591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845932:-1
position: 845932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:841820-842031:-1:exon

position:841820:-1
position: 841820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842031:-1
position: 842031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:839092-840994:-1:exon