Cygnus olor isolate bCygOlo1 chromosome 14, bCygOlo1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Cygnus olor isolate bCygOlo1 chromosome 14, bCygOlo1.pri.v2, whole genome shotgun sequence.
sequence version: NC_049182.1
sequence date: 2021-04-08
sequence: sequence
division: CON
label: NC_049182.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA642912
dblink: SAMN12621369
keyword: WGS
keyword: RefSeq
source: Cygnus olor (mute swan)
organism: Cygnus olor
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020078.2.\nAssembly name: bCygOlo1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/31. The original whole-genome shotgun project has the\naccession WNMI00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2020\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n v. 6.0.0.47841; purge_haplotigs v. 1.0.3+\n 1.Nov.2018; scaff10x v. 4.1.0; Bionano\n solve v. 3.2.1_04122018; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2020-11-30; VGP assembly pipeline\n individual v. 1.5\nAssembly Name :: bCygOlo1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.23x\nSequencing Technology :: PacBio Sequel 1 CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Cygnus olor Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20171002
topology: linear
so has quality: SO_0000987
location: 1..20171002
location: region:1-20171002:1
RO_0002162: 8869

NC_049182
type: RefSeq
SIO_000068: refseq

PRJNA642912
type: BioProject
SIO_000068: bioproject

SAMN12621369
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20171002:1
position: 20171002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20171002:1:source
so part of: sequence
organism: Cygnus olor
mol type: genomic DNA
isolate: bCygOlo1
chromosome: 14
sex: male
tissue type: muscle
dev stage: adult
country: Germany: Mainau
lat lon: 50.149850 N 11.063270 E
collection date: 2015-07-01
collected by: Robert Kraus

8869
type: Taxonomy
SIO_000068: taxonomy

EGR1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: EGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3451..6410)
location: region:3451-6410:-1
so has part: feature:3451-6410:-1:exon
subclass of: SO_0000010

121077943
type: Gene
SIO_000068: ncbigene

position:3451:-1
position: 3451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6410:-1
position: 6410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3451-6410:-1:exon

EGR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: EGR1
product: early growth response 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573612.1
SIO_010081: EGR1
subclass of: SO_0000673
so part of: EGR1
location: complement(join(3451..5734,6054..6410))
location: region:3451-6410:-1
so has part: feature:6054-6410:-1:exon
so has part: feature:3451-5734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6054-6410:-1:exon

position:6054:-1
position: 6054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3451-5734:-1:exon

position:5734:-1
position: 5734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EGR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: EGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: early growth response protein 1
translation: MAAAKAEMQLLPPLQISEPFGAFPHSPPAMDSHYPKLEEMMLLSGGGPQFLAPPGAPESAGFGAAGEPGEQHFEHLAADTFPEISLNNEKTLPETSYPNQTTRLPPITYTGRFSLEPAPNSSNTLWPEPLFSLVSGLVGMANAPPTSTPSSSSPSSSSQSPPLSCSVQASENSPIYSAAPTFPNSSSDIFPEPQTQSFPNPSGAPMQYPPPAYPAAKTNFQVPMIPDYLFPQQQGELSLIPADQKPFPALENRAQQPSLTPLSTIKAFATQTGSQELKTLNTNYQSQLIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKAEKAAPVSTTSPVAAYSSSVATSYPSSIATTYTSPVRTVYSSPAPSSYPSPAHTTFPSPSIATTYPSGTVTFQTQVATSFPSPGITNNFSSQVTSALSDMTSTFSPRTIEIC
SIO_010081: EGR1
subclass of: SO_0000673
so part of: EGR1
location: complement(join(4437..5734,6054..6288))
location: region:4437-6288:-1
so has part: feature:6054-6288:-1:exon
so has part: feature:4437-5734:-1:exon

XP_040429546.1
type: Protein
SIO_000068: ncbiprotein

position:4437:-1
position: 4437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6288:-1
position: 6288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6054-6288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4437-5734:-1:exon

LOC121077640
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9917..15392)
location: region:9917-15392:-1
so has part: feature:9917-15392:-1:exon
subclass of: SO_0000011

121077640
type: Gene
SIO_000068: ncbigene

position:9917:-1
position: 9917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15392:-1
position: 15392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9917-15392:-1:exon

LOC121077640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077640
product: uncharacterized LOC121077640
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005824212.1
SIO_010081: LOC121077640
subclass of: SO_0000673
so part of: LOC121077640
location: complement(join(9917..11446,12973..13238,13616..13715,15224..15392))
location: region:9917-15392:-1
so has part: feature:15224-15392:-1:exon
so has part: feature:13616-13715:-1:exon
so has part: feature:12973-13238:-1:exon
so has part: feature:9917-11446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15224-15392:-1:exon

position:15224:-1
position: 15224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13616-13715:-1:exon

position:13616:-1
position: 13616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13715:-1
position: 13715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12973-13238:-1:exon

position:12973:-1
position: 12973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13238:-1
position: 13238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9917-11446:-1:exon

position:11446:-1
position: 11446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REEP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15667..54074)
location: region:15667-54074:-1
so has part: feature:15667-54074:-1:exon
subclass of: SO_0000010

121077637
type: Gene
SIO_000068: ncbigene

position:15667:-1
position: 15667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54074:-1
position: 54074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15667-54074:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040572987.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(15667..16224,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54065))
location: region:15667-54065:-1
so has part: feature:53880-54065:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:15667-16224:-1:exon

position:54065:-1
position: 54065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54065:-1:exon

position:53880:-1
position: 53880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

position:53479:-1
position: 53479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53551:-1
position: 53551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

position:47288:-1
position: 47288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47364:-1
position: 47364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

position:45893:-1
position: 45893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45961:-1
position: 45961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

position:45560:-1
position: 45560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45680:-1
position: 45680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

position:44897:-1
position: 44897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45010:-1
position: 45010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

position:44343:-1
position: 44343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44490:-1
position: 44490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

position:43895:-1
position: 43895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44052:-1
position: 44052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15667-16224:-1:exon

position:16224:-1
position: 16224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X13
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEP
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(16219..16224,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..53911))
location: region:16219-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:16219-16224:-1:exon

XP_040428921.1
type: Protein
SIO_000068: ncbiprotein

position:16219:-1
position: 16219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53911:-1
position: 53911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16219-16224:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040572975.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54074))
location: region:19016-54074:-1
so has part: feature:53880-54074:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19016-20094:-1:exon

position:19016:-1
position: 19016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19016-20094:-1:exon

position:20094:-1
position: 20094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040572982.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44034,44343..44490,44897..45010,45560..45680,47288..47364,53479..53551,53880..54068))
location: region:19016-54068:-1
so has part: feature:53880-54068:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44034:-1:exon
so has part: feature:19016-20094:-1:exon

position:54068:-1
position: 54068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44034:-1:exon

position:44034:-1
position: 44034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:19016-20094:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040572976.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44034,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54068))
location: region:19016-54068:-1
so has part: feature:53880-54068:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44034:-1:exon
so has part: feature:19016-20094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44034:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19016-20094:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040572978.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44052,44343..44490,44897..45010,45560..45680,47288..47364,53479..53551,53880..54066))
location: region:19016-54066:-1
so has part: feature:53880-54066:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19016-20094:-1:exon

position:54066:-1
position: 54066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19016-20094:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040572983.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53163..53224,53479..53551,53880..53896))
location: region:19016-53896:-1
so has part: feature:53880-53896:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:53163-53224:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19016-20094:-1:exon

position:53896:-1
position: 53896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53163-53224:-1:exon

position:53163:-1
position: 53163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53224:-1
position: 53224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:19016-20094:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040572989.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44052,44343..44490,44897..45010,45560..45680,47288..47364,49624..50672,53479..53552))
location: region:19016-53552:-1
so has part: feature:53479-53552:-1:exon
so has part: feature:49624-50672:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19016-20094:-1:exon

position:53552:-1
position: 53552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53479-53552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49624-50672:-1:exon

position:49624:-1
position: 49624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50672:-1
position: 50672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19016-20094:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040572984.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,47459..48019))
location: region:19016-48019:-1
so has part: feature:47459-48019:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19016-20094:-1:exon

position:48019:-1
position: 48019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47459-48019:-1:exon

position:47459:-1
position: 47459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19016-20094:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040572991.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44052,44343..44490,44897..45010,45560..45616,47288..47364,47459..48018))
location: region:19016-48018:-1
so has part: feature:47459-48018:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45616:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19016-20094:-1:exon

position:48018:-1
position: 48018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47459-48018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45560-45616:-1:exon

position:45616:-1
position: 45616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:19016-20094:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040572990.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19016..20094,43895..44052,44343..44490,44897..45010,45560..45680,47288..47364,47459..48016))
location: region:19016-48016:-1
so has part: feature:47459-48016:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19016-20094:-1:exon

position:48016:-1
position: 48016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47459-48016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:19016-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X8
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44034,44343..44490,44897..45010,45560..45680,47288..47364,53479..53551,53880..53911))
location: region:19957-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44034:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428916.1
type: Protein
SIO_000068: ncbiprotein

position:19957:-1
position: 19957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X4
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44052,44343..44490,44897..45010,45560..45680,47288..47364,53479..53551,53880..53911))
location: region:19957-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X2
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44034,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..53911))
location: region:19957-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44034:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44034:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X1
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..53911))
location: region:19957-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X9
translation: MEVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53163..53168))
location: region:19957-53168:-1
so has part: feature:53163-53168:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428917.1
type: Protein
SIO_000068: ncbiprotein

position:53168:-1
position: 53168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53163-53168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X16
translation: MPSCCRLHLSEVDDVLDCVCLFHHCRNTHRHCSFLGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44052,44343..44490,44897..45010,45560..45616,47288..47364,47459..47486))
location: region:19957-47486:-1
so has part: feature:47459-47486:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45616:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428925.1
type: Protein
SIO_000068: ncbiprotein

position:47486:-1
position: 47486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47459-47486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45560-45616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X15
translation: MMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44052,44343..44490,44897..45010,45560..45680,47288..47355))
location: region:19957-47355:-1
so has part: feature:47288-47355:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428923.1
type: Protein
SIO_000068: ncbiprotein

position:47355:-1
position: 47355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47288-47355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X15
translation: MMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44052,44343..44490,44897..45010,45560..45680,47288..47355))
location: region:19957-47355:-1
so has part: feature:47288-47355:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47288-47355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X10
translation: MMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEDYQLKELYRCKTDILQVLNVAVQFSSERSCEDEVSRLRKLFSQWL
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(19957..20094,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47355))
location: region:19957-47355:-1
so has part: feature:47288-47355:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:19957-20094:-1:exon

XP_040428918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47288-47355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:19957-20094:-1:exon

REEP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824209.1
SIO_010081: REEP2
so part of: REEP2
location: complement(join(19966..20094,23859..23984,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54066))
location: region:19966-54066:-1
so has part: feature:53880-54066:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:23859-23984:-1:exon
so has part: feature:19966-20094:-1:exon

position:19966:-1
position: 19966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23859-23984:-1:exon

position:23859:-1
position: 23859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23984:-1
position: 23984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:19966-20094:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040572979.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(21988..23984,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54066))
location: region:21988-54066:-1
so has part: feature:53880-54066:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:21988-23984:-1:exon

position:21988:-1
position: 21988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21988-23984:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X5
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEIQLHYCFSGWSSGLSDFNLVLI
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(23916..23984,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..53911))
location: region:23916-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:23916-23984:-1:exon

XP_040428913.1
type: Protein
SIO_000068: ncbiprotein

position:23916:-1
position: 23916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23916-23984:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040572981.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(24648..40613,43895..44034,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54067))
location: region:24648-54067:-1
so has part: feature:53880-54067:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44034:-1:exon
so has part: feature:24648-40613:-1:exon

position:24648:-1
position: 24648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54067:-1
position: 54067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44034:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24648-40613:-1:exon

position:40613:-1
position: 40613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040572980.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(24648..40613,41903..41995,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54066))
location: region:24648-54066:-1
so has part: feature:53880-54066:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:41903-41995:-1:exon
so has part: feature:24648-40613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41903-41995:-1:exon

position:41903:-1
position: 41903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41995:-1
position: 41995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:24648-40613:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040572988.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(24648..40613,43895..44034,44343..44490,44897..45010,45560..45680,47288..47364,53479..53551,53880..54065))
location: region:24648-54065:-1
so has part: feature:53880-54065:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44034:-1:exon
so has part: feature:24648-40613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24648-40613:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040572985.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(24648..36707,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54065))
location: region:24648-54065:-1
so has part: feature:53880-54065:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:24648-36707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24648-36707:-1:exon

position:36707:-1
position: 36707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040572977.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(27962..40613,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..54068))
location: region:27962-54068:-1
so has part: feature:53880-54068:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:27962-40613:-1:exon

position:27962:-1
position: 27962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27962-40613:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: REEP2
product: receptor accessory protein 2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040572986.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(27962..40613,43895..44052,44343..44490,44897..45010,45560..45680,47288..47364,53479..53551,53880..54059))
location: region:27962-54059:-1
so has part: feature:53880-54059:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:27962-40613:-1:exon

position:54059:-1
position: 54059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-54059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:27962-40613:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X11
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAEVLF
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(36696..36707,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..53911))
location: region:36696-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:36696-36707:-1:exon

XP_040428919.1
type: Protein
SIO_000068: ncbiprotein

position:36696:-1
position: 36696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:36696-36707:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X14
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAELPVKSVKARPRKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(40539..40613,43895..44034,44343..44490,44897..45010,45560..45680,47288..47364,53479..53551,53880..53911))
location: region:40539-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44034:-1:exon
so has part: feature:40539-40613:-1:exon

XP_040428922.1
type: Protein
SIO_000068: ncbiprotein

position:40539:-1
position: 40539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:40539-40613:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X12
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAELPVKSVKARPRKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(40539..40613,43895..44052,44343..44490,44897..45010,45560..45680,47288..47364,53479..53551,53880..53911))
location: region:40539-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:40539-40613:-1:exon

XP_040428920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:40539-40613:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X7
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAELPVKSVKARPRKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(40539..40613,43895..44034,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..53911))
location: region:40539-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44034:-1:exon
so has part: feature:40539-40613:-1:exon

XP_040428915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44034:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40539-40613:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X3
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAELPVKSVKARPRKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(40539..40613,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..53911))
location: region:40539-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:40539-40613:-1:exon

XP_040428911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40539-40613:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X6
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYGVFMAMDERLNETQRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHLRSHEPQLHPPGASLLETIEDSASCYSSGEESSVAQRSNGTLTETRTDPSDEDAGDKLPKRTQSLKAPKKMTKAERTGFGMAIKKQKTYSSDVAT
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(41933..41995,43895..44052,44343..44490,44897..45010,45560..45680,45893..45961,47288..47364,53479..53551,53880..53911))
location: region:41933-53911:-1
so has part: feature:53880-53911:-1:exon
so has part: feature:53479-53551:-1:exon
so has part: feature:47288-47364:-1:exon
so has part: feature:45893-45961:-1:exon
so has part: feature:45560-45680:-1:exon
so has part: feature:44897-45010:-1:exon
so has part: feature:44343-44490:-1:exon
so has part: feature:43895-44052:-1:exon
so has part: feature:41933-41995:-1:exon

XP_040428914.1
type: Protein
SIO_000068: ncbiprotein

position:41933:-1
position: 41933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53880-53911:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53479-53551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47288-47364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45893-45961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45560-45680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44897-45010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44343-44490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43895-44052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41933-41995:-1:exon

KDM3B
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(58780..111667)
location: region:58780-111667:-1
so has part: feature:58780-111667:-1:exon
subclass of: SO_0000010

121078147
type: Gene
SIO_000068: ncbigene

position:58780:-1
position: 58780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111667:-1
position: 111667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58780-111667:-1:exon

KDM3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KDM3B
product: lysine demethylase 3B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573959.1
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(58780..60631,62754..62888,63404..63580,63933..64072,64573..64692,67592..67722,67808..67898,70686..70857,79263..79529,80864..81120,82103..82382,83515..83642,83731..83838,85821..85973,87029..87243,88615..88816,89476..90721,94456..95034,95979..96047,97385..97509,98438..98543,99003..99116,100507..100674,111412..111667))
location: region:58780-111667:-1
so has part: feature:111412-111667:-1:exon
so has part: feature:100507-100674:-1:exon
so has part: feature:99003-99116:-1:exon
so has part: feature:98438-98543:-1:exon
so has part: feature:97385-97509:-1:exon
so has part: feature:95979-96047:-1:exon
so has part: feature:94456-95034:-1:exon
so has part: feature:89476-90721:-1:exon
so has part: feature:88615-88816:-1:exon
so has part: feature:87029-87243:-1:exon
so has part: feature:85821-85973:-1:exon
so has part: feature:83731-83838:-1:exon
so has part: feature:83515-83642:-1:exon
so has part: feature:82103-82382:-1:exon
so has part: feature:80864-81120:-1:exon
so has part: feature:79263-79529:-1:exon
so has part: feature:70686-70857:-1:exon
so has part: feature:67808-67898:-1:exon
so has part: feature:67592-67722:-1:exon
so has part: feature:64573-64692:-1:exon
so has part: feature:63933-64072:-1:exon
so has part: feature:63404-63580:-1:exon
so has part: feature:62754-62888:-1:exon
so has part: feature:58780-60631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111412-111667:-1:exon

position:111412:-1
position: 111412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100507-100674:-1:exon

position:100507:-1
position: 100507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100674:-1
position: 100674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99003-99116:-1:exon

position:99003:-1
position: 99003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99116:-1
position: 99116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:98438-98543:-1:exon

position:98438:-1
position: 98438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98543:-1
position: 98543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:97385-97509:-1:exon

position:97385:-1
position: 97385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97509:-1
position: 97509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95979-96047:-1:exon

position:95979:-1
position: 95979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96047:-1
position: 96047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94456-95034:-1:exon

position:94456:-1
position: 94456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95034:-1
position: 95034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89476-90721:-1:exon

position:89476:-1
position: 89476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90721:-1
position: 90721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:88615-88816:-1:exon

position:88615:-1
position: 88615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88816:-1
position: 88816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:87029-87243:-1:exon

position:87029:-1
position: 87029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87243:-1
position: 87243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:85821-85973:-1:exon

position:85821:-1
position: 85821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85973:-1
position: 85973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:83731-83838:-1:exon

position:83731:-1
position: 83731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83838:-1
position: 83838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:83515-83642:-1:exon

position:83515:-1
position: 83515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83642:-1
position: 83642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:82103-82382:-1:exon

position:82103:-1
position: 82103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82382:-1
position: 82382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:80864-81120:-1:exon

position:80864:-1
position: 80864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81120:-1
position: 81120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:79263-79529:-1:exon

position:79263:-1
position: 79263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79529:-1
position: 79529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:70686-70857:-1:exon

position:70686:-1
position: 70686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70857:-1
position: 70857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:67808-67898:-1:exon

position:67808:-1
position: 67808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67898:-1
position: 67898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:67592-67722:-1:exon

position:67592:-1
position: 67592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67722:-1
position: 67722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:64573-64692:-1:exon

position:64573:-1
position: 64573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64692:-1
position: 64692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:63933-64072:-1:exon

position:63933:-1
position: 63933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64072:-1
position: 64072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:63404-63580:-1:exon

position:63404:-1
position: 63404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63580:-1
position: 63580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:62754-62888:-1:exon

position:62754:-1
position: 62754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62888:-1
position: 62888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:58780-60631:-1:exon

position:60631:-1
position: 60631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KDM3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KDM3B
product: lysine demethylase 3B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040573960.1
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(58780..60631,62754..62888,63404..63580,63933..64072,64573..64692,67592..67722,67808..67898,70686..70857,79263..79529,80864..81120,82103..82382,83515..83642,83731..83838,85821..85973,87029..87243,88615..88816,89476..90721,94456..95034,95979..96047,97385..97509,98438..98543,99003..99116,100507..100674,104393..104527))
location: region:58780-104527:-1
so has part: feature:104393-104527:-1:exon
so has part: feature:100507-100674:-1:exon
so has part: feature:99003-99116:-1:exon
so has part: feature:98438-98543:-1:exon
so has part: feature:97385-97509:-1:exon
so has part: feature:95979-96047:-1:exon
so has part: feature:94456-95034:-1:exon
so has part: feature:89476-90721:-1:exon
so has part: feature:88615-88816:-1:exon
so has part: feature:87029-87243:-1:exon
so has part: feature:85821-85973:-1:exon
so has part: feature:83731-83838:-1:exon
so has part: feature:83515-83642:-1:exon
so has part: feature:82103-82382:-1:exon
so has part: feature:80864-81120:-1:exon
so has part: feature:79263-79529:-1:exon
so has part: feature:70686-70857:-1:exon
so has part: feature:67808-67898:-1:exon
so has part: feature:67592-67722:-1:exon
so has part: feature:64573-64692:-1:exon
so has part: feature:63933-64072:-1:exon
so has part: feature:63404-63580:-1:exon
so has part: feature:62754-62888:-1:exon
so has part: feature:58780-60631:-1:exon

position:104527:-1
position: 104527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104393-104527:-1:exon

position:104393:-1
position: 104393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100507-100674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99003-99116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98438-98543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97385-97509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95979-96047:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94456-95034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89476-90721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88615-88816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87029-87243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85821-85973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83731-83838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83515-83642:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82103-82382:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:80864-81120:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79263-79529:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70686-70857:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67808-67898:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:67592-67722:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64573-64692:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63933-64072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:63404-63580:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:62754-62888:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:58780-60631:-1:exon

KDM3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KDM3B
product: lysine demethylase 3B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573961.1
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(58780..60631,62754..62888,63404..63580,63933..64072,64573..64692,67592..67722,67808..67898,70686..70857,79263..79529,80864..81120,82103..82382,83515..83642,83731..83838,85821..85973,87029..87243,88615..88816,89476..90721,94456..95034,95979..96047,97385..97509,98438..98543,99003..99116,100507..100674,101612..101721))
location: region:58780-101721:-1
so has part: feature:101612-101721:-1:exon
so has part: feature:100507-100674:-1:exon
so has part: feature:99003-99116:-1:exon
so has part: feature:98438-98543:-1:exon
so has part: feature:97385-97509:-1:exon
so has part: feature:95979-96047:-1:exon
so has part: feature:94456-95034:-1:exon
so has part: feature:89476-90721:-1:exon
so has part: feature:88615-88816:-1:exon
so has part: feature:87029-87243:-1:exon
so has part: feature:85821-85973:-1:exon
so has part: feature:83731-83838:-1:exon
so has part: feature:83515-83642:-1:exon
so has part: feature:82103-82382:-1:exon
so has part: feature:80864-81120:-1:exon
so has part: feature:79263-79529:-1:exon
so has part: feature:70686-70857:-1:exon
so has part: feature:67808-67898:-1:exon
so has part: feature:67592-67722:-1:exon
so has part: feature:64573-64692:-1:exon
so has part: feature:63933-64072:-1:exon
so has part: feature:63404-63580:-1:exon
so has part: feature:62754-62888:-1:exon
so has part: feature:58780-60631:-1:exon

position:101721:-1
position: 101721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101612-101721:-1:exon

position:101612:-1
position: 101612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100507-100674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99003-99116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98438-98543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97385-97509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95979-96047:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94456-95034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89476-90721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88615-88816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87029-87243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85821-85973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83731-83838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83515-83642:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82103-82382:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:80864-81120:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79263-79529:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70686-70857:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67808-67898:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:67592-67722:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64573-64692:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63933-64072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:63404-63580:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:62754-62888:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:58780-60631:-1:exon

KDM3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X1
translation: MADVAASPVGKRLLLLLAAGPGEGEAAGPEPGPALPSRAWRSGTVRAMSGAVPQDLAIFVEFDGCNWKQHAWVKVHAEEVIVLLLEGSLVWAPRNDPVMLQGTRVSPTQWPALTFTPLVDKLGLGSVVPVEFLLDRHLRFLSDASGLRLFQMGTESQNQILQEQPSLRESVNALFSDQKLQEIFSRVPYSIQGQRVKVYQPEDENSWLCGVVSHQDPITRLMEVSVTESGEIKSVDPRLIHVVMDNTSPSEGGGLKAAKSSKGKKKKESLEGKDGRRRKNASDSGCDPATKKLKEKGEVDSNGSDGGEASRGPWKGGSNSETGLDPRAKQLPSFIPQINRNIRFATYTKENGRTLVVQDEPVGGDTALPFTPFSAVAGQALLVGSGCKEAGKSLEQVSQGTVTSSTTVTTTALTPTTVRISDTSLPAVTGQDKLKTNRSQAQGENSRNSLLASSGFGVSLPSASQTLVFGGGRSQSNGVVTPESKPSGFTFGCSTGQEAQKDSDLSNNLFFQCMSQNLPSSNYFTVISESLTEDASSRDSFKQCTENVGAGTCKGKILSADTKPGAQSGSSVERKLPVESMPTLTPAFSRSLLNTRPPDSHENLFLQPPKLSREEPSNPFLAFAEKTELSPFSGFASSSQTGVSTPSTPVGHKATSGWPESLTSTDSCQAKKKTLFITTDSSKMISSTPCSTVAVGVQSPSTVGNGRSSSPSSNLTQPIEMPTLSSSPTEEKPAVGPGQQDNPLLKTFSNVFSRHPPGFFSSQSEFPQENKAPFEAVKRFSLDERSLTSKQDSDSSTNSDLSDLSDSEEQLQAKACMKGIPDHLMAKLGPNAERNAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGILRVEGFLNPQQSDPDAMSLWIPSSSPAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKNRPRSETEEIGDEEVFSWLKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGISQLPTVNASASVSGSESTFSTGAGTAGAGQLEVDSVPKSEANDSRTEEPAKTETLSTNNTAETKTNRPLCPETTPSSALHWLADLATQKAKEETKESGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFNSLLLGPVTSSNKAEGSSLRDLLHTGPGKLPQVPLDTGIPFPPVFSAASTGAKGKASLPNFLDHIIASVVENKKTSDAAKRASNLADTQRDVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLKTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLARS
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(60551..60631,62754..62888,63404..63580,63933..64072,64573..64692,67592..67722,67808..67898,70686..70857,79263..79529,80864..81120,82103..82382,83515..83642,83731..83838,85821..85973,87029..87243,88615..88816,89476..90721,94456..95034,95979..96047,97385..97509,98438..98543,99003..99116,100507..100674,111412..111582))
location: region:60551-111582:-1
so has part: feature:111412-111582:-1:exon
so has part: feature:100507-100674:-1:exon
so has part: feature:99003-99116:-1:exon
so has part: feature:98438-98543:-1:exon
so has part: feature:97385-97509:-1:exon
so has part: feature:95979-96047:-1:exon
so has part: feature:94456-95034:-1:exon
so has part: feature:89476-90721:-1:exon
so has part: feature:88615-88816:-1:exon
so has part: feature:87029-87243:-1:exon
so has part: feature:85821-85973:-1:exon
so has part: feature:83731-83838:-1:exon
so has part: feature:83515-83642:-1:exon
so has part: feature:82103-82382:-1:exon
so has part: feature:80864-81120:-1:exon
so has part: feature:79263-79529:-1:exon
so has part: feature:70686-70857:-1:exon
so has part: feature:67808-67898:-1:exon
so has part: feature:67592-67722:-1:exon
so has part: feature:64573-64692:-1:exon
so has part: feature:63933-64072:-1:exon
so has part: feature:63404-63580:-1:exon
so has part: feature:62754-62888:-1:exon
so has part: feature:60551-60631:-1:exon

XP_040429893.1
type: Protein
SIO_000068: ncbiprotein

position:60551:-1
position: 60551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111582:-1
position: 111582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111412-111582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100507-100674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99003-99116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98438-98543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97385-97509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95979-96047:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94456-95034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89476-90721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88615-88816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87029-87243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:85821-85973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83731-83838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83515-83642:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82103-82382:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:80864-81120:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79263-79529:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70686-70857:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67808-67898:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:67592-67722:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64573-64692:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63933-64072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:63404-63580:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:62754-62888:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:60551-60631:-1:exon

KDM3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X2
translation: MLQGTRVSPTQWPALTFTPLVDKLGLGSVVPVEFLLDRHLRFLSDASGLRLFQMGTESQNQILQEQPSLRESVNALFSDQKLQEIFSRVPYSIQGQRVKVYQPEDENSWLCGVVSHQDPITRLMEVSVTESGEIKSVDPRLIHVVMDNTSPSEGGGLKAAKSSKGKKKKESLEGKDGRRRKNASDSGCDPATKKLKEKGEVDSNGSDGGEASRGPWKGGSNSETGLDPRAKQLPSFIPQINRNIRFATYTKENGRTLVVQDEPVGGDTALPFTPFSAVAGQALLVGSGCKEAGKSLEQVSQGTVTSSTTVTTTALTPTTVRISDTSLPAVTGQDKLKTNRSQAQGENSRNSLLASSGFGVSLPSASQTLVFGGGRSQSNGVVTPESKPSGFTFGCSTGQEAQKDSDLSNNLFFQCMSQNLPSSNYFTVISESLTEDASSRDSFKQCTENVGAGTCKGKILSADTKPGAQSGSSVERKLPVESMPTLTPAFSRSLLNTRPPDSHENLFLQPPKLSREEPSNPFLAFAEKTELSPFSGFASSSQTGVSTPSTPVGHKATSGWPESLTSTDSCQAKKKTLFITTDSSKMISSTPCSTVAVGVQSPSTVGNGRSSSPSSNLTQPIEMPTLSSSPTEEKPAVGPGQQDNPLLKTFSNVFSRHPPGFFSSQSEFPQENKAPFEAVKRFSLDERSLTSKQDSDSSTNSDLSDLSDSEEQLQAKACMKGIPDHLMAKLGPNAERNAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGILRVEGFLNPQQSDPDAMSLWIPSSSPAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKNRPRSETEEIGDEEVFSWLKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGISQLPTVNASASVSGSESTFSTGAGTAGAGQLEVDSVPKSEANDSRTEEPAKTETLSTNNTAETKTNRPLCPETTPSSALHWLADLATQKAKEETKESGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFNSLLLGPVTSSNKAEGSSLRDLLHTGPGKLPQVPLDTGIPFPPVFSAASTGAKGKASLPNFLDHIIASVVENKKTSDAAKRASNLADTQRDVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLKTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLARS
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(60551..60631,62754..62888,63404..63580,63933..64072,64573..64692,67592..67722,67808..67898,70686..70857,79263..79529,80864..81120,82103..82382,83515..83642,83731..83838,85821..85973,87029..87243,88615..88816,89476..90721,94456..95034,95979..96047,97385..97509,98438..98543,99003..99116,100507..100551))
location: region:60551-100551:-1
so has part: feature:100507-100551:-1:exon
so has part: feature:99003-99116:-1:exon
so has part: feature:98438-98543:-1:exon
so has part: feature:97385-97509:-1:exon
so has part: feature:95979-96047:-1:exon
so has part: feature:94456-95034:-1:exon
so has part: feature:89476-90721:-1:exon
so has part: feature:88615-88816:-1:exon
so has part: feature:87029-87243:-1:exon
so has part: feature:85821-85973:-1:exon
so has part: feature:83731-83838:-1:exon
so has part: feature:83515-83642:-1:exon
so has part: feature:82103-82382:-1:exon
so has part: feature:80864-81120:-1:exon
so has part: feature:79263-79529:-1:exon
so has part: feature:70686-70857:-1:exon
so has part: feature:67808-67898:-1:exon
so has part: feature:67592-67722:-1:exon
so has part: feature:64573-64692:-1:exon
so has part: feature:63933-64072:-1:exon
so has part: feature:63404-63580:-1:exon
so has part: feature:62754-62888:-1:exon
so has part: feature:60551-60631:-1:exon

XP_040429894.1
type: Protein
SIO_000068: ncbiprotein

position:100551:-1
position: 100551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100507-100551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99003-99116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98438-98543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97385-97509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95979-96047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94456-95034:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89476-90721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:88615-88816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87029-87243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85821-85973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83731-83838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83515-83642:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82103-82382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:80864-81120:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:79263-79529:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:70686-70857:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67808-67898:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67592-67722:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:64573-64692:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63933-64072:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63404-63580:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:62754-62888:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:60551-60631:-1:exon

KDM3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X2
translation: MLQGTRVSPTQWPALTFTPLVDKLGLGSVVPVEFLLDRHLRFLSDASGLRLFQMGTESQNQILQEQPSLRESVNALFSDQKLQEIFSRVPYSIQGQRVKVYQPEDENSWLCGVVSHQDPITRLMEVSVTESGEIKSVDPRLIHVVMDNTSPSEGGGLKAAKSSKGKKKKESLEGKDGRRRKNASDSGCDPATKKLKEKGEVDSNGSDGGEASRGPWKGGSNSETGLDPRAKQLPSFIPQINRNIRFATYTKENGRTLVVQDEPVGGDTALPFTPFSAVAGQALLVGSGCKEAGKSLEQVSQGTVTSSTTVTTTALTPTTVRISDTSLPAVTGQDKLKTNRSQAQGENSRNSLLASSGFGVSLPSASQTLVFGGGRSQSNGVVTPESKPSGFTFGCSTGQEAQKDSDLSNNLFFQCMSQNLPSSNYFTVISESLTEDASSRDSFKQCTENVGAGTCKGKILSADTKPGAQSGSSVERKLPVESMPTLTPAFSRSLLNTRPPDSHENLFLQPPKLSREEPSNPFLAFAEKTELSPFSGFASSSQTGVSTPSTPVGHKATSGWPESLTSTDSCQAKKKTLFITTDSSKMISSTPCSTVAVGVQSPSTVGNGRSSSPSSNLTQPIEMPTLSSSPTEEKPAVGPGQQDNPLLKTFSNVFSRHPPGFFSSQSEFPQENKAPFEAVKRFSLDERSLTSKQDSDSSTNSDLSDLSDSEEQLQAKACMKGIPDHLMAKLGPNAERNAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGILRVEGFLNPQQSDPDAMSLWIPSSSPAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKNRPRSETEEIGDEEVFSWLKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGISQLPTVNASASVSGSESTFSTGAGTAGAGQLEVDSVPKSEANDSRTEEPAKTETLSTNNTAETKTNRPLCPETTPSSALHWLADLATQKAKEETKESGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFNSLLLGPVTSSNKAEGSSLRDLLHTGPGKLPQVPLDTGIPFPPVFSAASTGAKGKASLPNFLDHIIASVVENKKTSDAAKRASNLADTQRDVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLKTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLARS
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(60551..60631,62754..62888,63404..63580,63933..64072,64573..64692,67592..67722,67808..67898,70686..70857,79263..79529,80864..81120,82103..82382,83515..83642,83731..83838,85821..85973,87029..87243,88615..88816,89476..90721,94456..95034,95979..96047,97385..97509,98438..98543,99003..99116,100507..100551))
location: region:60551-100551:-1
so has part: feature:100507-100551:-1:exon
so has part: feature:99003-99116:-1:exon
so has part: feature:98438-98543:-1:exon
so has part: feature:97385-97509:-1:exon
so has part: feature:95979-96047:-1:exon
so has part: feature:94456-95034:-1:exon
so has part: feature:89476-90721:-1:exon
so has part: feature:88615-88816:-1:exon
so has part: feature:87029-87243:-1:exon
so has part: feature:85821-85973:-1:exon
so has part: feature:83731-83838:-1:exon
so has part: feature:83515-83642:-1:exon
so has part: feature:82103-82382:-1:exon
so has part: feature:80864-81120:-1:exon
so has part: feature:79263-79529:-1:exon
so has part: feature:70686-70857:-1:exon
so has part: feature:67808-67898:-1:exon
so has part: feature:67592-67722:-1:exon
so has part: feature:64573-64692:-1:exon
so has part: feature:63933-64072:-1:exon
so has part: feature:63404-63580:-1:exon
so has part: feature:62754-62888:-1:exon
so has part: feature:60551-60631:-1:exon

XP_040429895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100507-100551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99003-99116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98438-98543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97385-97509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95979-96047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94456-95034:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89476-90721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:88615-88816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87029-87243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85821-85973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83731-83838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83515-83642:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82103-82382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:80864-81120:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:79263-79529:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:70686-70857:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67808-67898:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67592-67722:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:64573-64692:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:63933-64072:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63404-63580:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:62754-62888:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:60551-60631:-1:exon

LOC121078148
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(117300..126170)
location: region:117300-126170:-1
so has part: feature:117300-126170:-1:exon
subclass of: SO_0000010

121078148
type: Gene
SIO_000068: ncbigene

position:117300:-1
position: 117300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126170:-1
position: 126170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117300-126170:-1:exon

LOC121078148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121078148
product: C-terminal-binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 767 long SRA reads, 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573962.1
SIO_010081: LOC121078148
subclass of: SO_0000673
so part of: LOC121078148
location: complement(join(117300..118878,119858..119978,120565..120692,120829..120959,121740..121954,122586..122792,125043..125187,125279..125433,125971..126170))
location: region:117300-126170:-1
so has part: feature:125971-126170:-1:exon
so has part: feature:125279-125433:-1:exon
so has part: feature:125043-125187:-1:exon
so has part: feature:122586-122792:-1:exon
so has part: feature:121740-121954:-1:exon
so has part: feature:120829-120959:-1:exon
so has part: feature:120565-120692:-1:exon
so has part: feature:119858-119978:-1:exon
so has part: feature:117300-118878:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125971-126170:-1:exon

position:125971:-1
position: 125971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125279-125433:-1:exon

position:125279:-1
position: 125279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125433:-1
position: 125433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:125043-125187:-1:exon

position:125043:-1
position: 125043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125187:-1
position: 125187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:122586-122792:-1:exon

position:122586:-1
position: 122586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122792:-1
position: 122792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:121740-121954:-1:exon

position:121740:-1
position: 121740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121954:-1
position: 121954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120829-120959:-1:exon

position:120829:-1
position: 120829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120959:-1
position: 120959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:120565-120692:-1:exon

position:120565:-1
position: 120565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120692:-1
position: 120692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:119858-119978:-1:exon

position:119858:-1
position: 119858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119978:-1
position: 119978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:117300-118878:-1:exon

position:118878:-1
position: 118878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121078148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121078148
product: C-terminal-binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573963.1
SIO_010081: LOC121078148
subclass of: SO_0000673
so part of: LOC121078148
location: complement(join(117300..118878,119858..119978,120565..120692,120829..120959,121740..121954,122586..122792,125043..125187,125279..125433,125695..125826))
location: region:117300-125826:-1
so has part: feature:125695-125826:-1:exon
so has part: feature:125279-125433:-1:exon
so has part: feature:125043-125187:-1:exon
so has part: feature:122586-122792:-1:exon
so has part: feature:121740-121954:-1:exon
so has part: feature:120829-120959:-1:exon
so has part: feature:120565-120692:-1:exon
so has part: feature:119858-119978:-1:exon
so has part: feature:117300-118878:-1:exon

position:125826:-1
position: 125826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125695-125826:-1:exon

position:125695:-1
position: 125695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125279-125433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125043-125187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122586-122792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121740-121954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120829-120959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120565-120692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119858-119978:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:117300-118878:-1:exon

LOC121078148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121078148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-terminal-binding protein 2 isoform X1
translation: MDRHKVKRQRLDRICEGIRPPLVNGPMPARPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLSRQDLEKFKALRVIVRIGSGYDNVDIKSAAELGIAVCNIPSSSVEETADSTLCHILNLYRRVTWLHQAMREGNRASSVEQIREVAGGAVRIRGETLGIIGLGRVGQAVALRAKSFGFNVIFYDPYLPDGVERSLGLQRVGTLQDLLMHSDCITLHCSLNEHNHHLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKEGRIRGTALDVHESEPFSFAQGPLKDAPNVICTPHTAWYSEQASIESREDAAKEIRRAITGHIPDALRNCVNKEYLLLAAQWSTIDPASVHPELNGAAAYRFPPGVVGVATPGLPEPPVVEGIVAHGIPSVSLSAPRTPSPGETSKLDADREIPADQ
SIO_010081: LOC121078148
subclass of: SO_0000673
so part of: LOC121078148
location: complement(join(118707..118878,119858..119978,120565..120692,120829..120959,121740..121954,122586..122792,125043..125187,125279..125433,125971..126019))
location: region:118707-126019:-1
so has part: feature:125971-126019:-1:exon
so has part: feature:125279-125433:-1:exon
so has part: feature:125043-125187:-1:exon
so has part: feature:122586-122792:-1:exon
so has part: feature:121740-121954:-1:exon
so has part: feature:120829-120959:-1:exon
so has part: feature:120565-120692:-1:exon
so has part: feature:119858-119978:-1:exon
so has part: feature:118707-118878:-1:exon

XP_040429896.1
type: Protein
SIO_000068: ncbiprotein

position:118707:-1
position: 118707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126019:-1
position: 126019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125971-126019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125279-125433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125043-125187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122586-122792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121740-121954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120829-120959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120565-120692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119858-119978:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118707-118878:-1:exon

LOC121078148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121078148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-terminal-binding protein 2 isoform X2
translation: MPARPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLSRQDLEKFKALRVIVRIGSGYDNVDIKSAAELGIAVCNIPSSSVEETADSTLCHILNLYRRVTWLHQAMREGNRASSVEQIREVAGGAVRIRGETLGIIGLGRVGQAVALRAKSFGFNVIFYDPYLPDGVERSLGLQRVGTLQDLLMHSDCITLHCSLNEHNHHLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKEGRIRGTALDVHESEPFSFAQGPLKDAPNVICTPHTAWYSEQASIESREDAAKEIRRAITGHIPDALRNCVNKEYLLLAAQWSTIDPASVHPELNGAAAYRFPPGVVGVATPGLPEPPVVEGIVAHGIPSVSLSAPRTPSPGETSKLDADREIPADQ
SIO_010081: LOC121078148
subclass of: SO_0000673
so part of: LOC121078148
location: complement(join(118707..118878,119858..119978,120565..120692,120829..120959,121740..121954,122586..122792,125043..125187,125279..125404))
location: region:118707-125404:-1
so has part: feature:125279-125404:-1:exon
so has part: feature:125043-125187:-1:exon
so has part: feature:122586-122792:-1:exon
so has part: feature:121740-121954:-1:exon
so has part: feature:120829-120959:-1:exon
so has part: feature:120565-120692:-1:exon
so has part: feature:119858-119978:-1:exon
so has part: feature:118707-118878:-1:exon

XP_040429897.1
type: Protein
SIO_000068: ncbiprotein

position:125404:-1
position: 125404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125279-125404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125043-125187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122586-122792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121740-121954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120829-120959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120565-120692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119858-119978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118707-118878:-1:exon

LOC121078149
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 126452..129704
location: region:126452-129704:1
so has part: feature:126452-129704:1:exon
subclass of: SO_0000011

121078149
type: Gene
SIO_000068: ncbigene

position:126452:1
position: 126452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129704:1
position: 129704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126452-129704:1:exon

LOC121078149
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078149
product: uncharacterized LOC121078149
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005824463.1
SIO_010081: LOC121078149
subclass of: SO_0000673
so part of: LOC121078149
location: join(126452..126938,127284..127356,128215..129704)
location: region:126452-129704:1
so has part: feature:126452-126938:1:exon
so has part: feature:127284-127356:1:exon
so has part: feature:128215-129704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126452-126938:1:exon

position:126938:1
position: 126938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127284-127356:1:exon

position:127284:1
position: 127284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127356:1
position: 127356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128215-129704:1:exon

position:128215:1
position: 128215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFRA3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GFRA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 138877..150303
location: region:138877-150303:1
so has part: feature:138877-150303:1:exon
subclass of: SO_0000010

121078187
type: Gene
SIO_000068: ncbigene

position:138877:1
position: 138877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150303:1
position: 150303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138877-150303:1:exon

GFRA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GFRA3
product: GDNF family receptor alpha 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040574017.1
SIO_010081: GFRA3
subclass of: SO_0000673
so part of: GFRA3
location: join(138877..139008,142578..142853,143549..143641,144056..144401,144480..144589,145745..145879,146688..146818,147126..150303)
location: region:138877-150303:1
so has part: feature:138877-139008:1:exon
so has part: feature:142578-142853:1:exon
so has part: feature:143549-143641:1:exon
so has part: feature:144056-144401:1:exon
so has part: feature:144480-144589:1:exon
so has part: feature:145745-145879:1:exon
so has part: feature:146688-146818:1:exon
so has part: feature:147126-150303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138877-139008:1:exon

position:139008:1
position: 139008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142578-142853:1:exon

position:142578:1
position: 142578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142853:1
position: 142853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143549-143641:1:exon

position:143549:1
position: 143549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143641:1
position: 143641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144056-144401:1:exon

position:144056:1
position: 144056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144401:1
position: 144401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:144480-144589:1:exon

position:144480:1
position: 144480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144589:1
position: 144589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:145745-145879:1:exon

position:145745:1
position: 145745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145879:1
position: 145879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:146688-146818:1:exon

position:146688:1
position: 146688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146818:1
position: 146818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:147126-150303:1:exon

position:147126:1
position: 147126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFRA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GFRA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDNF family receptor alpha-3
translation: MRLALLLGLLLSRAGDLLSLPRSDCIAAEQLCLSDSICNATYRILEDCALAKTRFLPLDHDSRVRCLNAELDLGNSSLLHCKCHRRMKRQEHCLRIFWTVHASMTDGYFNLETSPYENPANEEHWKTDYNELAALLSGSQLAGDATNPCLKATHVCNLSKKCVRLRTDYASICTKGAGSEDMCDRRKCHRGLRNFFEKVPEDFTRRILFCPCQDELCGERRRKTIVPDCSFQYNTKPNCLWVLDSCLEDHICKSRLADFQQNCQPADMSPDGCSQHNHAACLQAYMGMIGTPMTPNYISNSSVEVSLWCTCESSGNQKEKCDQILSMFESNKCLENTIWSQMHQKQTGLERQEDLFYSSSLSFQGDSASSSLASEMSQVAEVKTHRETSEHSSLPMVSSVYSGTAVSWSSLSLFLPLLLSAL
SIO_010081: GFRA3
subclass of: SO_0000673
so part of: GFRA3
location: join(138966..139008,142578..142853,143549..143641,144056..144401,144480..144589,145745..145879,146688..146818,147126..147260)
location: region:138966-147260:1
so has part: feature:138966-139008:1:exon
so has part: feature:142578-142853:1:exon
so has part: feature:143549-143641:1:exon
so has part: feature:144056-144401:1:exon
so has part: feature:144480-144589:1:exon
so has part: feature:145745-145879:1:exon
so has part: feature:146688-146818:1:exon
so has part: feature:147126-147260:1:exon

XP_040429951.1
type: Protein
SIO_000068: ncbiprotein

position:138966:1
position: 138966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147260:1
position: 147260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138966-139008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142578-142853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143549-143641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144056-144401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144480-144589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:145745-145879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146688-146818:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147126-147260:1:exon

LOC121078188
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(146688..170412)
location: region:146688-170412:-1
so has part: feature:146688-170412:-1:exon
subclass of: SO_0000011

121078188
type: Gene
SIO_000068: ncbigene

position:146688:-1
position: 146688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170412:-1
position: 170412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146688-170412:-1:exon

LOC121078188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078188
product: uncharacterized LOC121078188, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005824482.1
SIO_010081: LOC121078188
subclass of: SO_0000673
so part of: LOC121078188
location: complement(join(146688..146892,169872..169980,170203..170412))
location: region:146688-170412:-1
so has part: feature:170203-170412:-1:exon
so has part: feature:169872-169980:-1:exon
so has part: feature:146688-146892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170203-170412:-1:exon

position:170203:-1
position: 170203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:169872-169980:-1:exon

position:169872:-1
position: 169872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169980:-1
position: 169980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146688-146892:-1:exon

position:146892:-1
position: 146892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121078188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078188
product: uncharacterized LOC121078188, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005824483.1
SIO_010081: LOC121078188
subclass of: SO_0000673
so part of: LOC121078188
location: complement(join(146688..146892,169872..169980,170169..170412))
location: region:146688-170412:-1
so has part: feature:170169-170412:-1:exon
so has part: feature:169872-169980:-1:exon
so has part: feature:146688-146892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170169-170412:-1:exon

position:170169:-1
position: 170169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:169872-169980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146688-146892:-1:exon

LOC121078188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078188
product: uncharacterized LOC121078188, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005824481.1
SIO_010081: LOC121078188
subclass of: SO_0000673
so part of: LOC121078188
location: complement(join(162172..162331,169872..169980,170203..170412))
location: region:162172-170412:-1
so has part: feature:170203-170412:-1:exon
so has part: feature:169872-169980:-1:exon
so has part: feature:162172-162331:-1:exon

position:162172:-1
position: 162172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170203-170412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169872-169980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162172-162331:-1:exon

position:162331:-1
position: 162331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDC23
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: CDC23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 170441..181096
location: region:170441-181096:1
so has part: feature:170441-181096:1:exon
subclass of: SO_0000010

121078184
type: Gene
SIO_000068: ncbigene

position:170441:1
position: 170441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181096:1
position: 181096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170441-181096:1:exon

CDC23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDC23
product: cell division cycle 23, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040574015.1
SIO_010081: CDC23
subclass of: SO_0000673
so part of: CDC23
location: join(170441..170692,170763..170835,172504..172641,172931..172973,173329..173434,173520..173652,175236..175413,175507..175604,175838..175919,176496..176649,176799..176918,177785..177860,178156..178217,179131..179209,179304..179423,180276..181096)
location: region:170441-181096:1
so has part: feature:170441-170692:1:exon
so has part: feature:170763-170835:1:exon
so has part: feature:172504-172641:1:exon
so has part: feature:172931-172973:1:exon
so has part: feature:173329-173434:1:exon
so has part: feature:173520-173652:1:exon
so has part: feature:175236-175413:1:exon
so has part: feature:175507-175604:1:exon
so has part: feature:175838-175919:1:exon
so has part: feature:176496-176649:1:exon
so has part: feature:176799-176918:1:exon
so has part: feature:177785-177860:1:exon
so has part: feature:178156-178217:1:exon
so has part: feature:179131-179209:1:exon
so has part: feature:179304-179423:1:exon
so has part: feature:180276-181096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170441-170692:1:exon

position:170692:1
position: 170692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170763-170835:1:exon

position:170763:1
position: 170763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170835:1
position: 170835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172504-172641:1:exon

position:172504:1
position: 172504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172641:1
position: 172641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172931-172973:1:exon

position:172931:1
position: 172931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172973:1
position: 172973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173329-173434:1:exon

position:173329:1
position: 173329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173434:1
position: 173434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173520-173652:1:exon

position:173520:1
position: 173520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173652:1
position: 173652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:175236-175413:1:exon

position:175236:1
position: 175236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175413:1
position: 175413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:175507-175604:1:exon

position:175507:1
position: 175507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175604:1
position: 175604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:175838-175919:1:exon

position:175838:1
position: 175838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175919:1
position: 175919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:176496-176649:1:exon

position:176496:1
position: 176496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176649:1
position: 176649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:176799-176918:1:exon

position:176799:1
position: 176799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176918:1
position: 176918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:177785-177860:1:exon

position:177785:1
position: 177785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177860:1
position: 177860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:178156-178217:1:exon

position:178156:1
position: 178156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178217:1
position: 178217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:179131-179209:1:exon

position:179131:1
position: 179131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179209:1
position: 179209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:179304-179423:1:exon

position:179304:1
position: 179304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179423:1
position: 179423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:180276-181096:1:exon

position:180276:1
position: 180276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: CDC23
product: cell division cycle 23, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040574016.1
SIO_010081: CDC23
subclass of: SO_0000673
so part of: CDC23
location: join(170445..170692,170763..170835,172931..172973,173329..173434,173520..173652,175236..175413,175507..175604,175838..175919,176496..176649,176799..176918,177785..177860,178156..178217,179131..179209,179304..179423,180276..181096)
location: region:170445-181096:1
so has part: feature:170445-170692:1:exon
so has part: feature:170763-170835:1:exon
so has part: feature:172931-172973:1:exon
so has part: feature:173329-173434:1:exon
so has part: feature:173520-173652:1:exon
so has part: feature:175236-175413:1:exon
so has part: feature:175507-175604:1:exon
so has part: feature:175838-175919:1:exon
so has part: feature:176496-176649:1:exon
so has part: feature:176799-176918:1:exon
so has part: feature:177785-177860:1:exon
so has part: feature:178156-178217:1:exon
so has part: feature:179131-179209:1:exon
so has part: feature:179304-179423:1:exon
so has part: feature:180276-181096:1:exon

position:170445:1
position: 170445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170445-170692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170763-170835:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172931-172973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:173329-173434:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173520-173652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175236-175413:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175507-175604:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175838-175919:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:176496-176649:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:176799-176918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:177785-177860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:178156-178217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:179131-179209:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179304-179423:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:180276-181096:1:exon

CDC23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDC23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 23 homolog isoform X1
translation: MAAAGLCSADFSDLREIKKQLLSVAERSRERGLQHSGKWASELAFALEPLPLSELPPPPALSEEDARDLDAYTLAKSYFDLKEYDRAAYFLRGCKSQKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQVKNEALRELRVELSKKHKARELDGFGLYLYGVVLRKLDLVKEAIDVFVEAAHVLPLHWGAWLELCNLITDKEMLKFLSLPDTWMKEFFLAHIYTELQLIEEALQKYQSLIDAGFSKSTYIISQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKPELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLHEQLNESEQAAQCYIKYIQDIYSCGEIVEHLEVSTAFRYLAQYYFKCKLWDEASACAQKCCAFNDTREEGKALLRQILQLRNQGETSSTEIASPFFLPASLSANSTPTRRVSPLNLSSVTP
SIO_010081: CDC23
subclass of: SO_0000673
so part of: CDC23
location: join(170577..170692,170763..170835,172504..172641,172931..172973,173329..173434,173520..173652,175236..175413,175507..175604,175838..175919,176496..176649,176799..176918,177785..177860,178156..178217,179131..179209,179304..179423,180276..180446)
location: region:170577-180446:1
so has part: feature:170577-170692:1:exon
so has part: feature:170763-170835:1:exon
so has part: feature:172504-172641:1:exon
so has part: feature:172931-172973:1:exon
so has part: feature:173329-173434:1:exon
so has part: feature:173520-173652:1:exon
so has part: feature:175236-175413:1:exon
so has part: feature:175507-175604:1:exon
so has part: feature:175838-175919:1:exon
so has part: feature:176496-176649:1:exon
so has part: feature:176799-176918:1:exon
so has part: feature:177785-177860:1:exon
so has part: feature:178156-178217:1:exon
so has part: feature:179131-179209:1:exon
so has part: feature:179304-179423:1:exon
so has part: feature:180276-180446:1:exon

XP_040429949.1
type: Protein
SIO_000068: ncbiprotein

position:170577:1
position: 170577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180446:1
position: 180446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170577-170692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170763-170835:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172504-172641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172931-172973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173329-173434:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173520-173652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175236-175413:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175507-175604:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175838-175919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:176496-176649:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:176799-176918:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:177785-177860:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:178156-178217:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179131-179209:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179304-179423:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:180276-180446:1:exon

CDC23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: CDC23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 23 homolog isoform X2
translation: MAAAGLCSADFSDLREIKKQLLSVAERSRERGLQHSGKWASELAFALEPLPLSELPPPPALSESGEKKKDDETVDSLGPLEKGQVKNEALRELRVELSKKHKARELDGFGLYLYGVVLRKLDLVKEAIDVFVEAAHVLPLHWGAWLELCNLITDKEMLKFLSLPDTWMKEFFLAHIYTELQLIEEALQKYQSLIDAGFSKSTYIISQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKPELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLHEQLNESEQAAQCYIKYIQDIYSCGEIVEHLEVSTAFRYLAQYYFKCKLWDEASACAQKCCAFNDTREEGKALLRQILQLRNQGETSSTEIASPFFLPASLSANSTPTRRVSPLNLSSVTP
SIO_010081: CDC23
subclass of: SO_0000673
so part of: CDC23
location: join(170577..170692,170763..170835,172931..172973,173329..173434,173520..173652,175236..175413,175507..175604,175838..175919,176496..176649,176799..176918,177785..177860,178156..178217,179131..179209,179304..179423,180276..180446)
location: region:170577-180446:1
so has part: feature:170577-170692:1:exon
so has part: feature:170763-170835:1:exon
so has part: feature:172931-172973:1:exon
so has part: feature:173329-173434:1:exon
so has part: feature:173520-173652:1:exon
so has part: feature:175236-175413:1:exon
so has part: feature:175507-175604:1:exon
so has part: feature:175838-175919:1:exon
so has part: feature:176496-176649:1:exon
so has part: feature:176799-176918:1:exon
so has part: feature:177785-177860:1:exon
so has part: feature:178156-178217:1:exon
so has part: feature:179131-179209:1:exon
so has part: feature:179304-179423:1:exon
so has part: feature:180276-180446:1:exon

XP_040429950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170577-170692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170763-170835:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172931-172973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:173329-173434:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173520-173652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175236-175413:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175507-175604:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175838-175919:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:176496-176649:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:176799-176918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:177785-177860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:178156-178217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:179131-179209:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:179304-179423:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:180276-180446:1:exon

JAKMIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 186222..238247
location: region:186222-238247:1
so has part: feature:186222-238247:1:exon
subclass of: SO_0000010

121078189
type: Gene
SIO_000068: ncbigene

position:186222:1
position: 186222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238247:1
position: 238247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186222-238247:1:exon

JAKMIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040574018.1
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(186222..186364,205018..205287,209493..209991,211393..211602,212513..212611,214572..214718,216502..216642,217715..217771,219866..219985,220438..220566,221550..221633,221920..221982,223576..223674,224821..224919,225253..225306,226187..226252,227139..227207,228256..228333,229239..229442,230507..230572,237768..238247)
location: region:186222-238247:1
so has part: feature:186222-186364:1:exon
so has part: feature:205018-205287:1:exon
so has part: feature:209493-209991:1:exon
so has part: feature:211393-211602:1:exon
so has part: feature:212513-212611:1:exon
so has part: feature:214572-214718:1:exon
so has part: feature:216502-216642:1:exon
so has part: feature:217715-217771:1:exon
so has part: feature:219866-219985:1:exon
so has part: feature:220438-220566:1:exon
so has part: feature:221550-221633:1:exon
so has part: feature:221920-221982:1:exon
so has part: feature:223576-223674:1:exon
so has part: feature:224821-224919:1:exon
so has part: feature:225253-225306:1:exon
so has part: feature:226187-226252:1:exon
so has part: feature:227139-227207:1:exon
so has part: feature:228256-228333:1:exon
so has part: feature:229239-229442:1:exon
so has part: feature:230507-230572:1:exon
so has part: feature:237768-238247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186222-186364:1:exon

position:186364:1
position: 186364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205018-205287:1:exon

position:205018:1
position: 205018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205287:1
position: 205287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209493-209991:1:exon

position:209493:1
position: 209493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209991:1
position: 209991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:211393-211602:1:exon

position:211393:1
position: 211393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211602:1
position: 211602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212513-212611:1:exon

position:212513:1
position: 212513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212611:1
position: 212611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:214572-214718:1:exon

position:214572:1
position: 214572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214718:1
position: 214718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:216502-216642:1:exon

position:216502:1
position: 216502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216642:1
position: 216642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:217715-217771:1:exon

position:217715:1
position: 217715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217771:1
position: 217771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:219866-219985:1:exon

position:219866:1
position: 219866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219985:1
position: 219985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:220438-220566:1:exon

position:220438:1
position: 220438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220566:1
position: 220566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:221550-221633:1:exon

position:221550:1
position: 221550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221633:1
position: 221633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:221920-221982:1:exon

position:221920:1
position: 221920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221982:1
position: 221982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:223576-223674:1:exon

position:223576:1
position: 223576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223674:1
position: 223674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:224821-224919:1:exon

position:224821:1
position: 224821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224919:1
position: 224919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:225253-225306:1:exon

position:225253:1
position: 225253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225306:1
position: 225306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:226187-226252:1:exon

position:226187:1
position: 226187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226252:1
position: 226252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:227139-227207:1:exon

position:227139:1
position: 227139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227207:1
position: 227207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:228256-228333:1:exon

position:228256:1
position: 228256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228333:1
position: 228333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:229239-229442:1:exon

position:229239:1
position: 229239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229442:1
position: 229442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:230507-230572:1:exon

position:230507:1
position: 230507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230572:1
position: 230572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:237768-238247:1:exon

position:237768:1
position: 237768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAKMIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: JAKMIP2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: janus kinase and microtubule-interacting protein 2
translation: MSKKGRSKGEKPEALILALQAANEELRTKLTDIQIELHQEKSKVAKLEREKTQETKRIREVEQRKQTVQITELKAKLHEEKMKELQAVRENLIKQHEQEMTRMVKVRDSEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDSERLKLLQEITELKSAKKQVDEALNNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLVDERNELLKRVREAEKQCKPLLEKNKCLTKRNDELMQSLQRMEDKLKAVTKENIEMREKMTSHPPLKKLKSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKNKRSSKPIKRHVVDTVFGYDDDSMDSETSSVASYRTDRTPATPDDDLDESLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAEREAKAQEQLQAEVQRYKAKIEDLEKTLAQKGQDSHWVEDKQLFIKRNQELLDKIEKLEAENSRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVSIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLTEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKSTRPHR
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(205159..205287,209493..209991,211393..211602,212513..212611,214572..214718,216502..216642,217715..217771,219866..219985,220438..220566,221550..221633,221920..221982,223576..223674,224821..224919,225253..225306,226187..226252,227139..227207,228256..228333,229239..229442,230507..230572,237768..237788)
location: region:205159-237788:1
so has part: feature:205159-205287:1:exon
so has part: feature:209493-209991:1:exon
so has part: feature:211393-211602:1:exon
so has part: feature:212513-212611:1:exon
so has part: feature:214572-214718:1:exon
so has part: feature:216502-216642:1:exon
so has part: feature:217715-217771:1:exon
so has part: feature:219866-219985:1:exon
so has part: feature:220438-220566:1:exon
so has part: feature:221550-221633:1:exon
so has part: feature:221920-221982:1:exon
so has part: feature:223576-223674:1:exon
so has part: feature:224821-224919:1:exon
so has part: feature:225253-225306:1:exon
so has part: feature:226187-226252:1:exon
so has part: feature:227139-227207:1:exon
so has part: feature:228256-228333:1:exon
so has part: feature:229239-229442:1:exon
so has part: feature:230507-230572:1:exon
so has part: feature:237768-237788:1:exon

XP_040429952.1
type: Protein
SIO_000068: ncbiprotein

position:205159:1
position: 205159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237788:1
position: 237788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205159-205287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209493-209991:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211393-211602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212513-212611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214572-214718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216502-216642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217715-217771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:219866-219985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:220438-220566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:221550-221633:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:221920-221982:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:223576-223674:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224821-224919:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225253-225306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226187-226252:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:227139-227207:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:228256-228333:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:229239-229442:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:230507-230572:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:237768-237788:1:exon

LOC121078191
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(233731..239052)
location: region:233731-239052:-1
so has part: feature:233731-239052:-1:exon
subclass of: SO_0000011

121078191
type: Gene
SIO_000068: ncbigene

position:233731:-1
position: 233731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239052:-1
position: 239052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233731-239052:-1:exon

LOC121078191
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078191
product: uncharacterized LOC121078191
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824484.1
SIO_010081: LOC121078191
subclass of: SO_0000673
so part of: LOC121078191
location: complement(join(233731..233780,236425..236520,238977..239052))
location: region:233731-239052:-1
so has part: feature:238977-239052:-1:exon
so has part: feature:236425-236520:-1:exon
so has part: feature:233731-233780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238977-239052:-1:exon

position:238977:-1
position: 238977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236425-236520:-1:exon

position:236425:-1
position: 236425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236520:-1
position: 236520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233731-233780:-1:exon

position:233780:-1
position: 233780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121078192
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(248348..261754)
location: region:248348-261754:-1
so has part: feature:248348-261754:-1:exon
subclass of: SO_0000011

121078192
type: Gene
SIO_000068: ncbigene

position:248348:-1
position: 248348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261754:-1
position: 261754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248348-261754:-1:exon

LOC121078192
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078192
product: uncharacterized LOC121078192
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005824485.1
SIO_010081: LOC121078192
subclass of: SO_0000673
so part of: LOC121078192
location: complement(join(248348..248696,260936..261754))
location: region:248348-261754:-1
so has part: feature:260936-261754:-1:exon
so has part: feature:248348-248696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260936-261754:-1:exon

position:260936:-1
position: 260936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248348-248696:-1:exon

position:248696:-1
position: 248696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DPYSL3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: DPYSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 264159..300231
location: region:264159-300231:1
so has part: feature:264159-300231:1:exon
subclass of: SO_0000010

121078190
type: Gene
SIO_000068: ncbigene

position:264159:1
position: 264159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300231:1
position: 300231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264159-300231:1:exon

DPYSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: DPYSL3
product: dihydropyrimidinase like 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040574020.1
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(264159..264481,284430..284518,286236..286420,288549..288713,289031..289092,289588..289668,290805..290873,293219..293339,294176..294332,297173..297314,297585..297755,298335..298514,299117..299279,299607..300231)
location: region:264159-300231:1
so has part: feature:264159-264481:1:exon
so has part: feature:284430-284518:1:exon
so has part: feature:286236-286420:1:exon
so has part: feature:288549-288713:1:exon
so has part: feature:289031-289092:1:exon
so has part: feature:289588-289668:1:exon
so has part: feature:290805-290873:1:exon
so has part: feature:293219-293339:1:exon
so has part: feature:294176-294332:1:exon
so has part: feature:297173-297314:1:exon
so has part: feature:297585-297755:1:exon
so has part: feature:298335-298514:1:exon
so has part: feature:299117-299279:1:exon
so has part: feature:299607-300231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264159-264481:1:exon

position:264481:1
position: 264481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284430-284518:1:exon

position:284430:1
position: 284430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284518:1
position: 284518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286236-286420:1:exon

position:286236:1
position: 286236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286420:1
position: 286420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288549-288713:1:exon

position:288549:1
position: 288549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288713:1
position: 288713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289031-289092:1:exon

position:289031:1
position: 289031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289092:1
position: 289092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:289588-289668:1:exon

position:289588:1
position: 289588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289668:1
position: 289668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:290805-290873:1:exon

position:290805:1
position: 290805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290873:1
position: 290873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:293219-293339:1:exon

position:293219:1
position: 293219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293339:1
position: 293339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:294176-294332:1:exon

position:294176:1
position: 294176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294332:1
position: 294332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:297173-297314:1:exon

position:297173:1
position: 297173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297314:1
position: 297314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:297585-297755:1:exon

position:297585:1
position: 297585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297755:1
position: 297755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:298335-298514:1:exon

position:298335:1
position: 298335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298514:1
position: 298514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:299117-299279:1:exon

position:299117:1
position: 299117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299279:1
position: 299279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:299607-300231:1:exon

position:299607:1
position: 299607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPYSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: DPYSL3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dihydropyrimidinase-related protein 3
translation: MAAGGRRGGEELPVYLARPGAAAAPRQKRGGLFCSVEGAFESKTLDFGALRVGQRRAPPPAANPGPDPGPGPDPGPAPAPAPAPXEVRAASDKERLQNLCPDDDKSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTRLQMPYKGMTAVDDFFQGTKAALAGGTTMIMDHVVPEPESNLVEAFEKWREWADGKACCDYALHVDIPRWSERVRQELHTMVQEKGVNSFMVYMAYKDLYQMSNTELYEIFSCLGELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGNVVFGEPITASLGTDGTHYWSKNWAKAAAFVVSPPLSPDPTTPDYINSLLASGDLQVSGSAHCTFSTAQKAVGKDNFTAIPEGTNGIEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDSDLVIWDPDAVKIVTAKTHQSAAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGTGRFLPSSPFPDYVYKRIKARRKMAEMHAVPRGMYDGPVFDLTTTPKGGTPAGSTRGSPTRQTPPIRNLHQSGFSLSGTQIDEGVRSASKRIVAPPGGRSNITSLS
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(264168..264481,284430..284518,286236..286420,288549..288713,289031..289092,289588..289668,290805..290873,293219..293339,294176..294332,297173..297314,297585..297755,298335..298514,299117..299279,299607..299695)
location: region:264168-299695:1
so has part: feature:264168-264481:1:exon
so has part: feature:284430-284518:1:exon
so has part: feature:286236-286420:1:exon
so has part: feature:288549-288713:1:exon
so has part: feature:289031-289092:1:exon
so has part: feature:289588-289668:1:exon
so has part: feature:290805-290873:1:exon
so has part: feature:293219-293339:1:exon
so has part: feature:294176-294332:1:exon
so has part: feature:297173-297314:1:exon
so has part: feature:297585-297755:1:exon
so has part: feature:298335-298514:1:exon
so has part: feature:299117-299279:1:exon
so has part: feature:299607-299695:1:exon

XP_040429954.1
type: Protein
SIO_000068: ncbiprotein

position:264168:1
position: 264168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299695:1
position: 299695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264168-264481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284430-284518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286236-286420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288549-288713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289031-289092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289588-289668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:290805-290873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293219-293339:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294176-294332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297173-297314:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:297585-297755:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:298335-298514:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:299117-299279:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299607-299695:1:exon

STK32A
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: STK32A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(302318..335283)
location: region:302318-335283:-1
so has part: feature:302318-335283:-1:exon
subclass of: SO_0000010

121077999
type: Gene
SIO_000068: ncbigene

position:302318:-1
position: 302318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335283:-1
position: 335283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302318-335283:-1:exon

STK32A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: STK32A
product: serine/threonine kinase 32A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040573689.1
SIO_010081: STK32A
subclass of: SO_0000673
so part of: STK32A
location: complement(join(302318..303826,304740..304804,306414..306542,307656..307781,310246..310362,312276..312373,315983..316072,323124..323161,328140..328313,328469..328620,329600..329655,335100..335283))
location: region:302318-335283:-1
so has part: feature:335100-335283:-1:exon
so has part: feature:329600-329655:-1:exon
so has part: feature:328469-328620:-1:exon
so has part: feature:328140-328313:-1:exon
so has part: feature:323124-323161:-1:exon
so has part: feature:315983-316072:-1:exon
so has part: feature:312276-312373:-1:exon
so has part: feature:310246-310362:-1:exon
so has part: feature:307656-307781:-1:exon
so has part: feature:306414-306542:-1:exon
so has part: feature:304740-304804:-1:exon
so has part: feature:302318-303826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335100-335283:-1:exon

position:335100:-1
position: 335100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329600-329655:-1:exon

position:329600:-1
position: 329600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329655:-1
position: 329655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328469-328620:-1:exon

position:328469:-1
position: 328469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328620:-1
position: 328620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328140-328313:-1:exon

position:328140:-1
position: 328140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328313:-1
position: 328313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:323124-323161:-1:exon

position:323124:-1
position: 323124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323161:-1
position: 323161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:315983-316072:-1:exon

position:315983:-1
position: 315983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316072:-1
position: 316072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312276-312373:-1:exon

position:312276:-1
position: 312276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312373:-1
position: 312373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:310246-310362:-1:exon

position:310246:-1
position: 310246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310362:-1
position: 310362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:307656-307781:-1:exon

position:307656:-1
position: 307656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307781:-1
position: 307781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:306414-306542:-1:exon

position:306414:-1
position: 306414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306542:-1
position: 306542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:304740-304804:-1:exon

position:304740:-1
position: 304740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304804:-1
position: 304804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:302318-303826:-1:exon

position:303826:-1
position: 303826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STK32A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: STK32A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 32A
translation: MGANTSSKSPPFDENEDVTFDHFEILRAIGKGSFGKVCVVQKNDTKKMYAMKYMNKQECLERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVRFQEGTVKLFICELALALDYLQSRCIIHRDIKPDNILLDEHGHVHITDFNIATMLTKEMQVFTIAGTKPYMAPEMFNSTKPTGYSFAVDWWSLGITAYELLRARRPYHIRSNTSTNEMAHVFKTATVMYPAAWSKEMVTLIKKLLETNPDKRFSQLKDIQDFPYLSDVNWDAVLQKRIMPEFIPTKGRLNCDPTFELEEMILESKPLHKKKKRLAKKEKSTSKSNSSQAYHLQKHLEMLQRDFIVFNREKVRHQHNKTQEHAALANCLQKDGQNNNL
SIO_010081: STK32A
subclass of: SO_0000673
so part of: STK32A
location: complement(join(303742..303826,304740..304804,306414..306542,307656..307781,310246..310362,312276..312373,315983..316072,323124..323161,328140..328313,328469..328620,329600..329655,335100..335151))
location: region:303742-335151:-1
so has part: feature:335100-335151:-1:exon
so has part: feature:329600-329655:-1:exon
so has part: feature:328469-328620:-1:exon
so has part: feature:328140-328313:-1:exon
so has part: feature:323124-323161:-1:exon
so has part: feature:315983-316072:-1:exon
so has part: feature:312276-312373:-1:exon
so has part: feature:310246-310362:-1:exon
so has part: feature:307656-307781:-1:exon
so has part: feature:306414-306542:-1:exon
so has part: feature:304740-304804:-1:exon
so has part: feature:303742-303826:-1:exon

XP_040429623.1
type: Protein
SIO_000068: ncbiprotein

position:303742:-1
position: 303742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335151:-1
position: 335151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335100-335151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329600-329655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328469-328620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328140-328313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323124-323161:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315983-316072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312276-312373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310246-310362:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307656-307781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:306414-306542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:304740-304804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303742-303826:-1:exon

LOC121078000
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314112..326916
location: region:314112-326916:1
so has part: feature:314112-326916:1:exon
subclass of: SO_0000011

121078000
type: Gene
SIO_000068: ncbigene

position:314112:1
position: 314112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326916:1
position: 326916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314112-326916:1:exon

LOC121078000
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078000
product: uncharacterized LOC121078000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005824410.1
SIO_010081: LOC121078000
subclass of: SO_0000673
so part of: LOC121078000
location: join(314112..314168,314242..314374,320753..326916)
location: region:314112-326916:1
so has part: feature:314112-314168:1:exon
so has part: feature:314242-314374:1:exon
so has part: feature:320753-326916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314112-314168:1:exon

position:314168:1
position: 314168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314242-314374:1:exon

position:314242:1
position: 314242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314374:1
position: 314374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:320753-326916:1:exon

position:320753:1
position: 320753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R2B
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 347811..450684
location: region:347811-450684:1
so has part: feature:347811-450684:1:exon
subclass of: SO_0000010

121077830
type: Gene
SIO_000068: ncbigene

position:347811:1
position: 347811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450684:1
position: 450684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347811-450684:1:exon

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573394.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(347811..347965,348107..348184,422070..422167,423973..424138,426197..426309,437601..437778,441204..441368,447288..447457,447634..447725,448467..450684)
location: region:347811-450684:1
so has part: feature:347811-347965:1:exon
so has part: feature:348107-348184:1:exon
so has part: feature:422070-422167:1:exon
so has part: feature:423973-424138:1:exon
so has part: feature:426197-426309:1:exon
so has part: feature:437601-437778:1:exon
so has part: feature:441204-441368:1:exon
so has part: feature:447288-447457:1:exon
so has part: feature:447634-447725:1:exon
so has part: feature:448467-450684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347811-347965:1:exon

position:347965:1
position: 347965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348107-348184:1:exon

position:348107:1
position: 348107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348184:1
position: 348184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:422070-422167:1:exon

position:422070:1
position: 422070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422167:1
position: 422167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:423973-424138:1:exon

position:423973:1
position: 423973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424138:1
position: 424138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:426197-426309:1:exon

position:426197:1
position: 426197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426309:1
position: 426309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:437601-437778:1:exon

position:437601:1
position: 437601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437778:1
position: 437778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:441204-441368:1:exon

position:441204:1
position: 441204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441368:1
position: 441368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:447288-447457:1:exon

position:447288:1
position: 447288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447457:1
position: 447457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:447634-447725:1:exon

position:447634:1
position: 447634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447725:1
position: 447725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:448467-450684:1:exon

position:448467:1
position: 448467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
translation: MIPGFENFMQDVLWCFSQVKGTIDIGVTEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITTLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTSALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(347956..347965,348107..348184,422070..422167,423973..424138,426197..426309,437601..437778,441204..441368,447288..447457,447634..447725,448467..448746)
location: region:347956-448746:1
so has part: feature:347956-347965:1:exon
so has part: feature:348107-348184:1:exon
so has part: feature:422070-422167:1:exon
so has part: feature:423973-424138:1:exon
so has part: feature:426197-426309:1:exon
so has part: feature:437601-437778:1:exon
so has part: feature:441204-441368:1:exon
so has part: feature:447288-447457:1:exon
so has part: feature:447634-447725:1:exon
so has part: feature:448467-448746:1:exon

XP_040429328.1
type: Protein
SIO_000068: ncbiprotein

position:347956:1
position: 347956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448746:1
position: 448746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347956-347965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348107-348184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422070-422167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423973-424138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426197-426309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:437601-437778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441204-441368:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447288-447457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447634-447725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:448467-448746:1:exon

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573396.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(353498..353791,422070..422167,423973..424138,426197..426309,437601..437778,441204..441368,447288..447457,447634..447725,448467..450684)
location: region:353498-450684:1
so has part: feature:353498-353791:1:exon
so has part: feature:422070-422167:1:exon
so has part: feature:423973-424138:1:exon
so has part: feature:426197-426309:1:exon
so has part: feature:437601-437778:1:exon
so has part: feature:441204-441368:1:exon
so has part: feature:447288-447457:1:exon
so has part: feature:447634-447725:1:exon
so has part: feature:448467-450684:1:exon

position:353498:1
position: 353498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353498-353791:1:exon

position:353791:1
position: 353791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422070-422167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423973-424138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426197-426309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437601-437778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:441204-441368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447288-447457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447634-447725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448467-450684:1:exon

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
translation: MVLLPLFNYRFRKMKCFSRYLSYIFRPATSILSCSCHTEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITTLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTSALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(353674..353791,422070..422167,423973..424138,426197..426309,437601..437778,441204..441368,447288..447457,447634..447725,448467..448746)
location: region:353674-448746:1
so has part: feature:353674-353791:1:exon
so has part: feature:422070-422167:1:exon
so has part: feature:423973-424138:1:exon
so has part: feature:426197-426309:1:exon
so has part: feature:437601-437778:1:exon
so has part: feature:441204-441368:1:exon
so has part: feature:447288-447457:1:exon
so has part: feature:447634-447725:1:exon
so has part: feature:448467-448746:1:exon

XP_040429330.1
type: Protein
SIO_000068: ncbiprotein

position:353674:1
position: 353674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353674-353791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422070-422167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423973-424138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426197-426309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437601-437778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:441204-441368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447288-447457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447634-447725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448467-448746:1:exon

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573397.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(383294..383518,422070..422167,423973..424138,426197..426309,437601..437778,441204..441368,447288..447457,447634..447725,448467..450684)
location: region:383294-450684:1
so has part: feature:383294-383518:1:exon
so has part: feature:422070-422167:1:exon
so has part: feature:423973-424138:1:exon
so has part: feature:426197-426309:1:exon
so has part: feature:437601-437778:1:exon
so has part: feature:441204-441368:1:exon
so has part: feature:447288-447457:1:exon
so has part: feature:447634-447725:1:exon
so has part: feature:448467-450684:1:exon

position:383294:1
position: 383294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383294-383518:1:exon

position:383518:1
position: 383518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422070-422167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423973-424138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426197-426309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437601-437778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:441204-441368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447288-447457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447634-447725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448467-450684:1:exon

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3
translation: MEEDVETRKINSSFLRDHSYATEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITTLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTSALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(383449..383518,422070..422167,423973..424138,426197..426309,437601..437778,441204..441368,447288..447457,447634..447725,448467..448746)
location: region:383449-448746:1
so has part: feature:383449-383518:1:exon
so has part: feature:422070-422167:1:exon
so has part: feature:423973-424138:1:exon
so has part: feature:426197-426309:1:exon
so has part: feature:437601-437778:1:exon
so has part: feature:441204-441368:1:exon
so has part: feature:447288-447457:1:exon
so has part: feature:447634-447725:1:exon
so has part: feature:448467-448746:1:exon

XP_040429331.1
type: Protein
SIO_000068: ncbiprotein

position:383449:1
position: 383449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383449-383518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422070-422167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423973-424138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426197-426309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437601-437778:1:exon

urn:…
SIO_000300: 6
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urn:…
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urn:…
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SIO_000628: feature:447634-447725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448467-448746:1:exon

TCERG1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(454837..490006)
location: region:454837-490006:-1
so has part: feature:454837-490006:-1:exon
subclass of: SO_0000010

121077822
type: Gene
SIO_000068: ncbigene

position:454837:-1
position: 454837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490006:-1
position: 490006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454837-490006:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573370.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(454837..455991,456218..456318,456544..456627,457578..457757,458796..458978,459806..459970,464330..464480,466563..466681,467431..467520,468501..468636,470402..470468,471046..471206,472927..473015,474130..474245,476277..476477,481711..481953,484697..484952,485199..485351,489048..489273,489893..490006))
location: region:454837-490006:-1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:481711-481953:-1:exon

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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:468501-468636:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:467431-467520:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:466563-466681:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:464330-464480:-1:exon

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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:459806-459970:-1:exon

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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:458796-458978:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:457578-457757:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:456544-456627:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:456218-456318:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:454837-455991:-1:exon

position:455991:-1
position: 455991
reference: sequence
type: ReverseStrandPosition
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TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573369.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(454837..455991,456218..456318,456544..456627,457578..457757,458796..458978,459806..459970,464330..464480,466563..466681,467431..467520,468501..468636,470402..470468,471046..471206,472927..473015,474130..474245,476277..476477,477767..477829,481711..481953,484697..484952,485199..485351,489048..489273,489893..489978))
location: region:454837-489978:-1
so has part: feature:489893-489978:-1:exon
so has part: feature:489048-489273:-1:exon
so has part: feature:485199-485351:-1:exon
so has part: feature:484697-484952:-1:exon
so has part: feature:481711-481953:-1:exon
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so has part: feature:456544-456627:-1:exon
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so has part: feature:454837-455991:-1:exon

position:489978:-1
position: 489978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489893-489978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489048-489273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485199-485351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484697-484952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481711-481953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477767-477829:-1:exon

position:477767:-1
position: 477767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477829:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:476277-476477:-1:exon

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SIO_000300: 8
SIO_000628: feature:474130-474245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:472927-473015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471046-471206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:470402-470468:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:468501-468636:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:467431-467520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:466563-466681:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:464330-464480:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:459806-459970:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:458796-458978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457578-457757:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:456544-456627:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:456218-456318:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:454837-455991:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573372.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(454837..455991,456218..456318,456544..456627,457578..457757,458796..458978,459806..459970,464330..464480,466563..466681,467431..467520,468501..468636,470402..470468,471046..471206,472927..473015,474130..474245,476277..476477,484697..484952,485199..485351,489048..489273,489893..489963))
location: region:454837-489963:-1
so has part: feature:489893-489963:-1:exon
so has part: feature:489048-489273:-1:exon
so has part: feature:485199-485351:-1:exon
so has part: feature:484697-484952:-1:exon
so has part: feature:476277-476477:-1:exon
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so has part: feature:464330-464480:-1:exon
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so has part: feature:456544-456627:-1:exon
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so has part: feature:454837-455991:-1:exon

position:489963:-1
position: 489963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489893-489963:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:474130-474245:-1:exon

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SIO_000300: 7
SIO_000628: feature:472927-473015:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471046-471206:-1:exon

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SIO_000300: 9
SIO_000628: feature:470402-470468:-1:exon

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SIO_000300: 10
SIO_000628: feature:468501-468636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:467431-467520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:466563-466681:-1:exon

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SIO_000300: 13
SIO_000628: feature:464330-464480:-1:exon

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SIO_000300: 14
SIO_000628: feature:459806-459970:-1:exon

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SIO_000300: 15
SIO_000628: feature:458796-458978:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457578-457757:-1:exon

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SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:456218-456318:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:454837-455991:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573371.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(454837..455991,456218..456318,456544..456627,457578..457757,458796..458978,459806..459970,464330..464480,466563..466681,467431..467520,468501..468636,470402..470468,471046..471206,472927..473012,474130..474245,476277..476477,477767..477829,481711..481953,484697..484952,485199..485351,489048..489273,489893..489963))
location: region:454837-489963:-1
so has part: feature:489893-489963:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 9
SIO_000628: feature:472927-473012:-1:exon

position:473012:-1
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urn:…
SIO_000300: 10
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SIO_000300: 19
SIO_000628: feature:456544-456627:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:456218-456318:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:454837-455991:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X2
translation: MAERGGGGGAGGGGGEGEAAAERFGGDIRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVTAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAQAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTISTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKIKEPIKEPMEEPLPMETEEEEPKEEPIKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHESTEDANEDEPIKIKKRKKDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(455790..455991,456218..456318,456544..456627,457578..457757,458796..458978,459806..459970,464330..464480,466563..466681,467431..467520,468501..468636,470402..470468,471046..471206,472927..473015,474130..474245,476277..476477,481711..481953,484697..484952,485199..485351,489048..489273,489893..489978))
location: region:455790-489978:-1
so has part: feature:489893-489978:-1:exon
so has part: feature:489048-489273:-1:exon
so has part: feature:485199-485351:-1:exon
so has part: feature:484697-484952:-1:exon
so has part: feature:481711-481953:-1:exon
so has part: feature:476277-476477:-1:exon
so has part: feature:474130-474245:-1:exon
so has part: feature:472927-473015:-1:exon
so has part: feature:471046-471206:-1:exon
so has part: feature:470402-470468:-1:exon
so has part: feature:468501-468636:-1:exon
so has part: feature:467431-467520:-1:exon
so has part: feature:466563-466681:-1:exon
so has part: feature:464330-464480:-1:exon
so has part: feature:459806-459970:-1:exon
so has part: feature:458796-458978:-1:exon
so has part: feature:457578-457757:-1:exon
so has part: feature:456544-456627:-1:exon
so has part: feature:456218-456318:-1:exon
so has part: feature:455790-455991:-1:exon

XP_040429304.1
type: Protein
SIO_000068: ncbiprotein

position:455790:-1
position: 455790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489893-489978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489048-489273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485199-485351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484697-484952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481711-481953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476277-476477:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474130-474245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472927-473015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471046-471206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:470402-470468:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468501-468636:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:467431-467520:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:466563-466681:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:464330-464480:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459806-459970:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:458796-458978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:457578-457757:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456544-456627:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:456218-456318:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:455790-455991:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X1
translation: MAERGGGGGAGGGGGEGEAAAERFGGDIRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVTAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAQAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTISTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKIKEPIKEPMEEPLPMETEEEEPKEEPIKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHESTEDANEDEPIKIKKRKKDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(455790..455991,456218..456318,456544..456627,457578..457757,458796..458978,459806..459970,464330..464480,466563..466681,467431..467520,468501..468636,470402..470468,471046..471206,472927..473015,474130..474245,476277..476477,477767..477829,481711..481953,484697..484952,485199..485351,489048..489273,489893..489978))
location: region:455790-489978:-1
so has part: feature:489893-489978:-1:exon
so has part: feature:489048-489273:-1:exon
so has part: feature:485199-485351:-1:exon
so has part: feature:484697-484952:-1:exon
so has part: feature:481711-481953:-1:exon
so has part: feature:477767-477829:-1:exon
so has part: feature:476277-476477:-1:exon
so has part: feature:474130-474245:-1:exon
so has part: feature:472927-473015:-1:exon
so has part: feature:471046-471206:-1:exon
so has part: feature:470402-470468:-1:exon
so has part: feature:468501-468636:-1:exon
so has part: feature:467431-467520:-1:exon
so has part: feature:466563-466681:-1:exon
so has part: feature:464330-464480:-1:exon
so has part: feature:459806-459970:-1:exon
so has part: feature:458796-458978:-1:exon
so has part: feature:457578-457757:-1:exon
so has part: feature:456544-456627:-1:exon
so has part: feature:456218-456318:-1:exon
so has part: feature:455790-455991:-1:exon

XP_040429303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489893-489978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489048-489273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485199-485351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484697-484952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481711-481953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477767-477829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476277-476477:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474130-474245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:472927-473015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471046-471206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:470402-470468:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:468501-468636:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:467431-467520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:466563-466681:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:464330-464480:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:459806-459970:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:458796-458978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457578-457757:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:456544-456627:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:456218-456318:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:455790-455991:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X4
translation: MAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVTAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAQAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTISSVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKIKEPIKEPMEEPLPMETEEEEPKEEPIKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHESTEDANEDEPIKIKKRKKDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(455790..455991,456218..456318,456544..456627,457578..457757,458796..458978,459806..459970,464330..464480,466563..466681,467431..467520,468501..468636,470402..470468,471046..471206,472927..473015,474130..474245,476277..476477,484697..484952,485199..485351,489048..489272))
location: region:455790-489272:-1
so has part: feature:489048-489272:-1:exon
so has part: feature:485199-485351:-1:exon
so has part: feature:484697-484952:-1:exon
so has part: feature:476277-476477:-1:exon
so has part: feature:474130-474245:-1:exon
so has part: feature:472927-473015:-1:exon
so has part: feature:471046-471206:-1:exon
so has part: feature:470402-470468:-1:exon
so has part: feature:468501-468636:-1:exon
so has part: feature:467431-467520:-1:exon
so has part: feature:466563-466681:-1:exon
so has part: feature:464330-464480:-1:exon
so has part: feature:459806-459970:-1:exon
so has part: feature:458796-458978:-1:exon
so has part: feature:457578-457757:-1:exon
so has part: feature:456544-456627:-1:exon
so has part: feature:456218-456318:-1:exon
so has part: feature:455790-455991:-1:exon

XP_040429306.1
type: Protein
SIO_000068: ncbiprotein

position:489272:-1
position: 489272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489048-489272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485199-485351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484697-484952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476277-476477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474130-474245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472927-473015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471046-471206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470402-470468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:468501-468636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:467431-467520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466563-466681:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464330-464480:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459806-459970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:458796-458978:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457578-457757:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456544-456627:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456218-456318:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:455790-455991:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X3
translation: MAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVTAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAQAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTISTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKIKEPIKEPMEEPLPMETEEEEPKEEPIKELIKEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHESTEDANEDEPIKIKKRKKDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(455790..455991,456218..456318,456544..456627,457578..457757,458796..458978,459806..459970,464330..464480,466563..466681,467431..467520,468501..468636,470402..470468,471046..471206,472927..473012,474130..474245,476277..476477,477767..477829,481711..481953,484697..484952,485199..485351,489048..489272))
location: region:455790-489272:-1
so has part: feature:489048-489272:-1:exon
so has part: feature:485199-485351:-1:exon
so has part: feature:484697-484952:-1:exon
so has part: feature:481711-481953:-1:exon
so has part: feature:477767-477829:-1:exon
so has part: feature:476277-476477:-1:exon
so has part: feature:474130-474245:-1:exon
so has part: feature:472927-473012:-1:exon
so has part: feature:471046-471206:-1:exon
so has part: feature:470402-470468:-1:exon
so has part: feature:468501-468636:-1:exon
so has part: feature:467431-467520:-1:exon
so has part: feature:466563-466681:-1:exon
so has part: feature:464330-464480:-1:exon
so has part: feature:459806-459970:-1:exon
so has part: feature:458796-458978:-1:exon
so has part: feature:457578-457757:-1:exon
so has part: feature:456544-456627:-1:exon
so has part: feature:456218-456318:-1:exon
so has part: feature:455790-455991:-1:exon

XP_040429305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489048-489272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485199-485351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484697-484952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481711-481953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477767-477829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476277-476477:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474130-474245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472927-473012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471046-471206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:470402-470468:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468501-468636:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:467431-467520:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:466563-466681:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:464330-464480:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459806-459970:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:458796-458978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:457578-457757:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456544-456627:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:456218-456318:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:455790-455991:-1:exon

POU4F3
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: POU4F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(505044..506577)
location: region:505044-506577:-1
so has part: feature:505044-506577:-1:exon
subclass of: SO_0000010

121077853
type: Gene
SIO_000068: ncbigene

position:505044:-1
position: 505044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506577:-1
position: 506577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505044-506577:-1:exon

POU4F3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: POU4F3
product: POU class 4 homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040573446.1
SIO_010081: POU4F3
subclass of: SO_0000673
so part of: POU4F3
location: complement(join(505044..505933,506229..506577))
location: region:505044-506577:-1
so has part: feature:506229-506577:-1:exon
so has part: feature:505044-505933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506229-506577:-1:exon

position:506229:-1
position: 506229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505044-505933:-1:exon

position:505933:-1
position: 505933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POU4F3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: POU4F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 4, transcription factor 3
translation: MMAMNAKQPFTMHAALQEPKYSSLHSSSEAMRRVCLPAPQLQGNIFGSFDESLLARAEALAAVDIVSHGKSHPFKPDATYHTMSSVPCAPAAPAALPHPAALTSHPHHAAHPALDGDLLEHLSPSLAVGGLGEPPAVPPPLPPHPLGAMGHLAVGVGPPGGPAPPLPAAPCLPDAESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMTALRPVLQAWLEEAEAAHRDRAAKPELFAGAERKRKRTSIAAPEKRSLEAYFALQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH
SIO_010081: POU4F3
subclass of: SO_0000673
so part of: POU4F3
location: complement(join(505052..505933,506229..506348))
location: region:505052-506348:-1
so has part: feature:506229-506348:-1:exon
so has part: feature:505052-505933:-1:exon

XP_040429380.1
type: Protein
SIO_000068: ncbiprotein

position:505052:-1
position: 505052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506348:-1
position: 506348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506229-506348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505052-505933:-1:exon

RBM27
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(523001..547649)
location: region:523001-547649:-1
so has part: feature:523001-547649:-1:exon
subclass of: SO_0000010

121077838
type: Gene
SIO_000068: ncbigene

position:523001:-1
position: 523001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547649:-1
position: 547649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523001-547649:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RBM27
product: RNA binding motif protein 27, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573419.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(523001..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529926,530412..530533,531411..531539,531666..531929,533072..533225,533511..533658,537798..537932,539245..539478,540032..540289,541082..541275,541862..541953,544412..544536,545231..545349,547495..547649))
location: region:523001-547649:-1
so has part: feature:547495-547649:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540289:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530412-530533:-1:exon
so has part: feature:529848-529926:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:523001-526207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547649:-1:exon

position:547495:-1
position: 547495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

position:545231:-1
position: 545231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545349:-1
position: 545349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

position:544412:-1
position: 544412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544536:-1
position: 544536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

position:541862:-1
position: 541862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541953:-1
position: 541953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

position:541082:-1
position: 541082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541275:-1
position: 541275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540289:-1:exon

position:540032:-1
position: 540032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540289:-1
position: 540289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

position:539245:-1
position: 539245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539478:-1
position: 539478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

position:537798:-1
position: 537798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537932:-1
position: 537932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:533511-533658:-1:exon

position:533511:-1
position: 533511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533658:-1
position: 533658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:533072-533225:-1:exon

position:533072:-1
position: 533072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533225:-1
position: 533225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:531666-531929:-1:exon

position:531666:-1
position: 531666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531929:-1
position: 531929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:531411-531539:-1:exon

position:531411:-1
position: 531411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531539:-1
position: 531539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:530412-530533:-1:exon

position:530412:-1
position: 530412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530533:-1
position: 530533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:529848-529926:-1:exon

position:529848:-1
position: 529848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529926:-1
position: 529926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:529578-529742:-1:exon

position:529578:-1
position: 529578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529742:-1
position: 529742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:529052-529156:-1:exon

position:529052:-1
position: 529052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529156:-1
position: 529156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:528755-528946:-1:exon

position:528755:-1
position: 528755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528946:-1
position: 528946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:527611-527697:-1:exon

position:527611:-1
position: 527611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527697:-1
position: 527697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:527044-527154:-1:exon

position:527044:-1
position: 527044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527154:-1
position: 527154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:523001-526207:-1:exon

position:526207:-1
position: 526207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RBM27
product: RNA binding motif protein 27, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040573420.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(523001..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529922,530411..530533,531411..531539,531666..531929,533072..533225,533511..533658,537798..537932,539245..539478,540032..540289,541082..541275,541862..541953,544412..544536,545231..545349,547495..547649))
location: region:523001-547649:-1
so has part: feature:547495-547649:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540289:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530411-530533:-1:exon
so has part: feature:529848-529922:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:523001-526207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:530411-530533:-1:exon

position:530411:-1
position: 530411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:529848-529922:-1:exon

position:529922:-1
position: 529922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:523001-526207:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RBM27
product: RNA binding motif protein 27, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573415.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(523001..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529926,530412..530533,531411..531539,531666..531929,533072..533225,533511..533658,535542..535691,537798..537932,539245..539478,540032..540289,541082..541275,541862..541953,544412..544536,545231..545349,547495..547649))
location: region:523001-547649:-1
so has part: feature:547495-547649:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540289:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:535542-535691:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530412-530533:-1:exon
so has part: feature:529848-529926:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:523001-526207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535691:-1:exon

position:535542:-1
position: 535542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535691:-1
position: 535691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530412-530533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529848-529926:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:523001-526207:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RBM27
product: RNA binding motif protein 27, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 123 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040573416.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(523001..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529922,530411..530533,531411..531539,531666..531929,533072..533225,533511..533658,535542..535691,537798..537932,539245..539478,540032..540289,541082..541275,541862..541953,544412..544536,545231..545349,547495..547649))
location: region:523001-547649:-1
so has part: feature:547495-547649:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540289:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:535542-535691:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530411-530533:-1:exon
so has part: feature:529848-529922:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:523001-526207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530411-530533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529848-529922:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:523001-526207:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RBM27
product: RNA binding motif protein 27, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573417.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(523001..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529926,530412..530533,531411..531539,531666..531929,533072..533225,533511..533658,537798..537932,539245..539478,540032..540292,541082..541275,541862..541953,544412..544536,545231..545349,547495..547649))
location: region:523001-547649:-1
so has part: feature:547495-547649:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540292:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530412-530533:-1:exon
so has part: feature:529848-529926:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:523001-526207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540292:-1:exon

position:540292:-1
position: 540292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:530412-530533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:529848-529926:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:523001-526207:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RBM27
product: RNA binding motif protein 27, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040573418.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(523001..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529922,530411..530533,531411..531539,531666..531929,533072..533225,533511..533658,537798..537932,539245..539478,540032..540292,541082..541275,541862..541953,544412..544536,545231..545349,547495..547649))
location: region:523001-547649:-1
so has part: feature:547495-547649:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540292:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530411-530533:-1:exon
so has part: feature:529848-529922:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:523001-526207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:530411-530533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:529848-529922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:523001-526207:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RBM27
product: RNA binding motif protein 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573413.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(523001..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529926,530412..530533,531411..531539,531666..531929,533072..533225,533511..533658,535542..535691,537798..537932,539245..539478,540032..540292,541082..541275,541862..541953,544412..544536,545231..545349,547495..547649))
location: region:523001-547649:-1
so has part: feature:547495-547649:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540292:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:535542-535691:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530412-530533:-1:exon
so has part: feature:529848-529926:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:523001-526207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530412-530533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529848-529926:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:523001-526207:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RBM27
product: RNA binding motif protein 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040573414.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(523001..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529922,530411..530533,531411..531539,531666..531929,533072..533225,533511..533658,535542..535691,537798..537932,539245..539478,540032..540292,541082..541275,541862..541953,544412..544536,545231..545349,547495..547649))
location: region:523001-547649:-1
so has part: feature:547495-547649:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540292:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:535542-535691:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530411-530533:-1:exon
so has part: feature:529848-529922:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:523001-526207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530411-530533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529848-529922:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:523001-526207:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X7
translation: MIIENVEALKSWLARLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSLEPTKVEAKPASQEKEEVKEENFQESVEEERDGRKKKHSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYRDKSSWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDSSRNVEHRERSKFKSERNDVEGSYNPVSVSPSNSTEQYSSAQSIPSAVTVIAPAHHLENTTESWSNYYNNHSNPSSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPMPGPARSMRMPVPQAHPQAPPPVVLPVPRPPLTQSSLINNRDQPGTSAVPSLASVGARLPPPLPQNLLYTVSEPANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQANNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLTNDEARKAISSTEAVLNNRFIRVLWHRESEQNPPLLQQPQQQSPSQSLHHQLHLQQQALTTPPAVTMHSNMSKAMNKPLASGAYVLNKVPVKRRLGAAGGSQSDLSQSGAVVEDSQTFPTSTSHSKTVYSTSNLKTAMKPGAGSKPHDVQEALKKKQQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELAGKISQLKDELKTSSATSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTMPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVLTFKSRSEAENAANQGSRFKDRRLQISWYKPKVPSVSTEIEEEEPKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(526121..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529926,530412..530533,531411..531539,531666..531929,533072..533225,533511..533658,537798..537932,539245..539478,540032..540289,541082..541275,541862..541953,544412..544536,545231..545349,547495..547553))
location: region:526121-547553:-1
so has part: feature:547495-547553:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540289:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530412-530533:-1:exon
so has part: feature:529848-529926:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:526121-526207:-1:exon

XP_040429353.1
type: Protein
SIO_000068: ncbiprotein

position:526121:-1
position: 526121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547553:-1
position: 547553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:530412-530533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:529848-529926:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:526121-526207:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X8
translation: MIIENVEALKSWLARLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSLEPTKVEAKPASQEKEEVKEENFQESVEEERDGRKKKHSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYRDKSSWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDSSRNVEHRERSKFKSERNDVEGSYNPVSVSPSNSTEQYSSAQSIPSAVTVIAPAHHLENTTESWSNYYNNHSNPSSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPMPGPARSMRMPVPQAHPQAPPPVVLPVPRPPLTQSSLINNRDQPGTSAVPSLASVGARLPPPLPQNLLYTVSEPANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQANNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLTNDEARKAISSTEAVLNNRFIRVLWHRESEQNPPLLQQPQQQSPSQSLHHQLHLQQQALTTPPAVTMHSNMSKAMNKPLASGAYVLNKVPVKRRLGAAGGSQSDLSQSGAVVEDSQTFPTSTSHSKTVYSTSNLKTAMKPGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELAGKISQLKDELKTSSATSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTMPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVLTFKSRSEAENAANQGSRFKDRRLQISWYKPKVPSVSTEIEEEEPKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(526121..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529922,530411..530533,531411..531539,531666..531929,533072..533225,533511..533658,537798..537932,539245..539478,540032..540289,541082..541275,541862..541953,544412..544536,545231..545349,547495..547553))
location: region:526121-547553:-1
so has part: feature:547495-547553:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540289:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530411-530533:-1:exon
so has part: feature:529848-529922:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:526121-526207:-1:exon

XP_040429354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:530411-530533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:529848-529922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:526121-526207:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X3
translation: MIIENVEALKSWLARLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSLEPTKVEAKPASQEKEEVKEENFQESVEEERDGRKKKHSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYRDKSSWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDSSRNVEHRERSKFKSERNDVEGSYNPVSVSPSNSTEQYSSAQSIPSAVTVIAPAHHLENTTESWSNYYNNHSNPSSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPMPGPARSMRMPVPQAHPQAPPPVVLPVPRPPLTQSSLINNRDQPGTSAVPSLASVGARLPPPLPQNLLYTVSEHTYEPDGYNPEAPSITSAGRSQYRQFFTRAQTQRPNLIGLTSGEMDTNPRAANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQANNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLTNDEARKAISSTEAVLNNRFIRVLWHRESEQNPPLLQQPQQQSPSQSLHHQLHLQQQALTTPPAVTMHSNMSKAMNKPLASGAYVLNKVPVKRRLGAAGGSQSDLSQSGAVVEDSQTFPTSTSHSKTVYSTSNLKTAMKPGAGSKPHDVQEALKKKQQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELAGKISQLKDELKTSSATSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTMPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVLTFKSRSEAENAANQGSRFKDRRLQISWYKPKVPSVSTEIEEEEPKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(526121..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529926,530412..530533,531411..531539,531666..531929,533072..533225,533511..533658,535542..535691,537798..537932,539245..539478,540032..540289,541082..541275,541862..541953,544412..544536,545231..545349,547495..547553))
location: region:526121-547553:-1
so has part: feature:547495-547553:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540289:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:535542-535691:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530412-530533:-1:exon
so has part: feature:529848-529926:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:526121-526207:-1:exon

XP_040429349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530412-530533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529848-529926:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:526121-526207:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X4
translation: MIIENVEALKSWLARLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSLEPTKVEAKPASQEKEEVKEENFQESVEEERDGRKKKHSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYRDKSSWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDSSRNVEHRERSKFKSERNDVEGSYNPVSVSPSNSTEQYSSAQSIPSAVTVIAPAHHLENTTESWSNYYNNHSNPSSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPMPGPARSMRMPVPQAHPQAPPPVVLPVPRPPLTQSSLINNRDQPGTSAVPSLASVGARLPPPLPQNLLYTVSEHTYEPDGYNPEAPSITSAGRSQYRQFFTRAQTQRPNLIGLTSGEMDTNPRAANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQANNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLTNDEARKAISSTEAVLNNRFIRVLWHRESEQNPPLLQQPQQQSPSQSLHHQLHLQQQALTTPPAVTMHSNMSKAMNKPLASGAYVLNKVPVKRRLGAAGGSQSDLSQSGAVVEDSQTFPTSTSHSKTVYSTSNLKTAMKPGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELAGKISQLKDELKTSSATSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTMPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVLTFKSRSEAENAANQGSRFKDRRLQISWYKPKVPSVSTEIEEEEPKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(526121..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529922,530411..530533,531411..531539,531666..531929,533072..533225,533511..533658,535542..535691,537798..537932,539245..539478,540032..540289,541082..541275,541862..541953,544412..544536,545231..545349,547495..547553))
location: region:526121-547553:-1
so has part: feature:547495-547553:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540289:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:535542-535691:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530411-530533:-1:exon
so has part: feature:529848-529922:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:526121-526207:-1:exon

XP_040429350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530411-530533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529848-529922:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:526121-526207:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X5
translation: MIIENVEALKSWLARLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSLEPTKVEAKPASQEKEEVKEENFQESVEEERDGRKKKHSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYRDKSSWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDSSRNVAEHRERSKFKSERNDVEGSYNPVSVSPSNSTEQYSSAQSIPSAVTVIAPAHHLENTTESWSNYYNNHSNPSSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPMPGPARSMRMPVPQAHPQAPPPVVLPVPRPPLTQSSLINNRDQPGTSAVPSLASVGARLPPPLPQNLLYTVSEPANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQANNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLTNDEARKAISSTEAVLNNRFIRVLWHRESEQNPPLLQQPQQQSPSQSLHHQLHLQQQALTTPPAVTMHSNMSKAMNKPLASGAYVLNKVPVKRRLGAAGGSQSDLSQSGAVVEDSQTFPTSTSHSKTVYSTSNLKTAMKPGAGSKPHDVQEALKKKQQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELAGKISQLKDELKTSSATSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTMPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVLTFKSRSEAENAANQGSRFKDRRLQISWYKPKVPSVSTEIEEEEPKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(526121..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529926,530412..530533,531411..531539,531666..531929,533072..533225,533511..533658,537798..537932,539245..539478,540032..540292,541082..541275,541862..541953,544412..544536,545231..545349,547495..547553))
location: region:526121-547553:-1
so has part: feature:547495-547553:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540292:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530412-530533:-1:exon
so has part: feature:529848-529926:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:526121-526207:-1:exon

XP_040429351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:530412-530533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:529848-529926:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:526121-526207:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X6
translation: MIIENVEALKSWLARLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSLEPTKVEAKPASQEKEEVKEENFQESVEEERDGRKKKHSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYRDKSSWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDSSRNVAEHRERSKFKSERNDVEGSYNPVSVSPSNSTEQYSSAQSIPSAVTVIAPAHHLENTTESWSNYYNNHSNPSSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPMPGPARSMRMPVPQAHPQAPPPVVLPVPRPPLTQSSLINNRDQPGTSAVPSLASVGARLPPPLPQNLLYTVSEPANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQANNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLTNDEARKAISSTEAVLNNRFIRVLWHRESEQNPPLLQQPQQQSPSQSLHHQLHLQQQALTTPPAVTMHSNMSKAMNKPLASGAYVLNKVPVKRRLGAAGGSQSDLSQSGAVVEDSQTFPTSTSHSKTVYSTSNLKTAMKPGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELAGKISQLKDELKTSSATSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTMPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVLTFKSRSEAENAANQGSRFKDRRLQISWYKPKVPSVSTEIEEEEPKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(526121..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529922,530411..530533,531411..531539,531666..531929,533072..533225,533511..533658,537798..537932,539245..539478,540032..540292,541082..541275,541862..541953,544412..544536,545231..545349,547495..547553))
location: region:526121-547553:-1
so has part: feature:547495-547553:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540292:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530411-530533:-1:exon
so has part: feature:529848-529922:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:526121-526207:-1:exon

XP_040429352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:530411-530533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:529848-529922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:526121-526207:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X1
translation: MIIENVEALKSWLARLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSLEPTKVEAKPASQEKEEVKEENFQESVEEERDGRKKKHSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYRDKSSWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDSSRNVAEHRERSKFKSERNDVEGSYNPVSVSPSNSTEQYSSAQSIPSAVTVIAPAHHLENTTESWSNYYNNHSNPSSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPMPGPARSMRMPVPQAHPQAPPPVVLPVPRPPLTQSSLINNRDQPGTSAVPSLASVGARLPPPLPQNLLYTVSEHTYEPDGYNPEAPSITSAGRSQYRQFFTRAQTQRPNLIGLTSGEMDTNPRAANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQANNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLTNDEARKAISSTEAVLNNRFIRVLWHRESEQNPPLLQQPQQQSPSQSLHHQLHLQQQALTTPPAVTMHSNMSKAMNKPLASGAYVLNKVPVKRRLGAAGGSQSDLSQSGAVVEDSQTFPTSTSHSKTVYSTSNLKTAMKPGAGSKPHDVQEALKKKQQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELAGKISQLKDELKTSSATSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTMPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVLTFKSRSEAENAANQGSRFKDRRLQISWYKPKVPSVSTEIEEEEPKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(526121..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529926,530412..530533,531411..531539,531666..531929,533072..533225,533511..533658,535542..535691,537798..537932,539245..539478,540032..540292,541082..541275,541862..541953,544412..544536,545231..545349,547495..547553))
location: region:526121-547553:-1
so has part: feature:547495-547553:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540292:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:535542-535691:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530412-530533:-1:exon
so has part: feature:529848-529926:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:526121-526207:-1:exon

XP_040429347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530412-530533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529848-529926:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:526121-526207:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X2
translation: MIIENVEALKSWLARLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSLEPTKVEAKPASQEKEEVKEENFQESVEEERDGRKKKHSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYRDKSSWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDSSRNVAEHRERSKFKSERNDVEGSYNPVSVSPSNSTEQYSSAQSIPSAVTVIAPAHHLENTTESWSNYYNNHSNPSSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPMPGPARSMRMPVPQAHPQAPPPVVLPVPRPPLTQSSLINNRDQPGTSAVPSLASVGARLPPPLPQNLLYTVSEHTYEPDGYNPEAPSITSAGRSQYRQFFTRAQTQRPNLIGLTSGEMDTNPRAANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQANNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLTNDEARKAISSTEAVLNNRFIRVLWHRESEQNPPLLQQPQQQSPSQSLHHQLHLQQQALTTPPAVTMHSNMSKAMNKPLASGAYVLNKVPVKRRLGAAGGSQSDLSQSGAVVEDSQTFPTSTSHSKTVYSTSNLKTAMKPGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELAGKISQLKDELKTSSATSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTMPAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVLTFKSRSEAENAANQGSRFKDRRLQISWYKPKVPSVSTEIEEEEPKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(526121..526207,527044..527154,527611..527697,528755..528946,529052..529156,529578..529742,529848..529922,530411..530533,531411..531539,531666..531929,533072..533225,533511..533658,535542..535691,537798..537932,539245..539478,540032..540292,541082..541275,541862..541953,544412..544536,545231..545349,547495..547553))
location: region:526121-547553:-1
so has part: feature:547495-547553:-1:exon
so has part: feature:545231-545349:-1:exon
so has part: feature:544412-544536:-1:exon
so has part: feature:541862-541953:-1:exon
so has part: feature:541082-541275:-1:exon
so has part: feature:540032-540292:-1:exon
so has part: feature:539245-539478:-1:exon
so has part: feature:537798-537932:-1:exon
so has part: feature:535542-535691:-1:exon
so has part: feature:533511-533658:-1:exon
so has part: feature:533072-533225:-1:exon
so has part: feature:531666-531929:-1:exon
so has part: feature:531411-531539:-1:exon
so has part: feature:530411-530533:-1:exon
so has part: feature:529848-529922:-1:exon
so has part: feature:529578-529742:-1:exon
so has part: feature:529052-529156:-1:exon
so has part: feature:528755-528946:-1:exon
so has part: feature:527611-527697:-1:exon
so has part: feature:527044-527154:-1:exon
so has part: feature:526121-526207:-1:exon

XP_040429348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547495-547553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545231-545349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544412-544536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541862-541953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541082-541275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540032-540292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539245-539478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537798-537932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535542-535691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533511-533658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533072-533225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:531666-531929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531411-531539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530411-530533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529848-529922:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:529578-529742:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:529052-529156:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528755-528946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:527611-527697:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:527044-527154:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:526121-526207:-1:exon

LARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 547866..578049
location: region:547866-578049:1
so has part: feature:547866-578049:1:exon
subclass of: SO_0000010

121077813
type: Gene
SIO_000068: ncbigene

position:547866:1
position: 547866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578049:1
position: 578049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547866-578049:1:exon

LARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LARS1
product: leucyl-tRNA synthetase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 long SRA reads, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573359.1
SIO_010081: LARS1
subclass of: SO_0000673
so part of: LARS1
location: join(547866..547968,548765..548883,552136..552223,552929..553009,553441..553581,554674..554835,555098..555210,555602..555665,556195..556262,556603..556828,558205..558292,558394..558470,559121..559174,560162..560302,560946..561023,562037..562122,562215..562280,562381..562463,563118..563256,564766..564978,566420..566477,567396..567459,567993..568176,568417..568506,569425..569565,570165..570305,570409..570519,571647..571757,573301..573405,574537..574632,575530..575662,577631..578049)
location: region:547866-578049:1
so has part: feature:547866-547968:1:exon
so has part: feature:548765-548883:1:exon
so has part: feature:552136-552223:1:exon
so has part: feature:552929-553009:1:exon
so has part: feature:553441-553581:1:exon
so has part: feature:554674-554835:1:exon
so has part: feature:555098-555210:1:exon
so has part: feature:555602-555665:1:exon
so has part: feature:556195-556262:1:exon
so has part: feature:556603-556828:1:exon
so has part: feature:558205-558292:1:exon
so has part: feature:558394-558470:1:exon
so has part: feature:559121-559174:1:exon
so has part: feature:560162-560302:1:exon
so has part: feature:560946-561023:1:exon
so has part: feature:562037-562122:1:exon
so has part: feature:562215-562280:1:exon
so has part: feature:562381-562463:1:exon
so has part: feature:563118-563256:1:exon
so has part: feature:564766-564978:1:exon
so has part: feature:566420-566477:1:exon
so has part: feature:567396-567459:1:exon
so has part: feature:567993-568176:1:exon
so has part: feature:568417-568506:1:exon
so has part: feature:569425-569565:1:exon
so has part: feature:570165-570305:1:exon
so has part: feature:570409-570519:1:exon
so has part: feature:571647-571757:1:exon
so has part: feature:573301-573405:1:exon
so has part: feature:574537-574632:1:exon
so has part: feature:575530-575662:1:exon
so has part: feature:577631-578049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547866-547968:1:exon

position:547968:1
position: 547968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548765-548883:1:exon

position:548765:1
position: 548765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548883:1
position: 548883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552136-552223:1:exon

position:552136:1
position: 552136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552223:1
position: 552223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552929-553009:1:exon

position:552929:1
position: 552929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553009:1
position: 553009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:553441-553581:1:exon

position:553441:1
position: 553441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553581:1
position: 553581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554674-554835:1:exon

position:554674:1
position: 554674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554835:1
position: 554835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:555098-555210:1:exon

position:555098:1
position: 555098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555210:1
position: 555210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:555602-555665:1:exon

position:555602:1
position: 555602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555665:1
position: 555665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:556195-556262:1:exon

position:556195:1
position: 556195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556262:1
position: 556262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:556603-556828:1:exon

position:556603:1
position: 556603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556828:1
position: 556828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:558205-558292:1:exon

position:558205:1
position: 558205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558292:1
position: 558292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:558394-558470:1:exon

position:558394:1
position: 558394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558470:1
position: 558470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:559121-559174:1:exon

position:559121:1
position: 559121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559174:1
position: 559174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:560162-560302:1:exon

position:560162:1
position: 560162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560302:1
position: 560302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:560946-561023:1:exon

position:560946:1
position: 560946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561023:1
position: 561023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:562037-562122:1:exon

position:562037:1
position: 562037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562122:1
position: 562122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:562215-562280:1:exon

position:562215:1
position: 562215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562280:1
position: 562280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:562381-562463:1:exon

position:562381:1
position: 562381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562463:1
position: 562463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:563118-563256:1:exon

position:563118:1
position: 563118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563256:1
position: 563256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:564766-564978:1:exon

position:564766:1
position: 564766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564978:1
position: 564978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:566420-566477:1:exon

position:566420:1
position: 566420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566477:1
position: 566477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:567396-567459:1:exon

position:567396:1
position: 567396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567459:1
position: 567459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:567993-568176:1:exon

position:567993:1
position: 567993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568176:1
position: 568176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:568417-568506:1:exon

position:568417:1
position: 568417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568506:1
position: 568506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:569425-569565:1:exon

position:569425:1
position: 569425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569565:1
position: 569565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:570165-570305:1:exon

position:570165:1
position: 570165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570305:1
position: 570305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:570409-570519:1:exon

position:570409:1
position: 570409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570519:1
position: 570519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:571647-571757:1:exon

position:571647:1
position: 571647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571757:1
position: 571757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:573301-573405:1:exon

position:573301:1
position: 573301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573405:1
position: 573405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:574537-574632:1:exon

position:574537:1
position: 574537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574632:1
position: 574632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:575530-575662:1:exon

position:575530:1
position: 575530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575662:1
position: 575662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:577631-578049:1:exon

position:577631:1
position: 577631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LARS1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leucine--tRNA ligase, cytoplasmic
translation: MAERKGTAKVDFLKKIEKEIQQKWDDERVFEANALDAQNQKSKGKYFVTFPYPYMNGRLHLGHTFSLSKCEFATGYQRLKGKNCLFPFGLHCTGMPIKACADKLKREMELYGCPPEFPDEEEEEEENSVKKEEEFIIKDKAKGKKSKAAAKTGSSKYQWGIMKSLGLSDEEVIGFSEAEHWLDYFPPLAVQDLKSMGLKVDWRRSFITTDVNPYYDSFVRWQFLTLRERNKIKFGKRYTIYSPKDGQPCMDHDRQTGEGVGPQEYTLIKMKVLDPYPAKLSGLRGKNIFLVAATLRPETMFGQTNCWVRPDMKYIGFETVNGDIFICTQRAARNMSYQGFTKDNGVVPVVKELMGEEILGAALSAPLTTYKVIYALPMLTIKEDKGTGVVTSVPSDSPDDIAALRDLKKKQALRVKYGIKDEMVLPFEPVPIIEIPGYGNLCAPSVCDELKIQSQNDREKLAEAKERVYLKGFYEGVMLVDGYKGQKVQDVKKLIQKMMVDNDEAMIYMEPEKQVISRSTDECVVALCDQWYLDYGEVDWKQQASECLKHLETFCEETRRNFEATLGWLQEHACSRTYGLGTRLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGNLRGQGESPVGIRAHQMSKEVWDYIFFKAAPFPKTDIPKEKLDKLKEEFEFWYPVDLRVSGKDLIPNHLSYYLYNHVAMWSDQREKWPVAVRANGHLLLNSEKMSKSTGNFLTLTQAVDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMIANRDSLRSGPANTFNDRVFASEMNAGIVKTDQNYEKMMFKEAXKTGFFEFQAAKDKYRELAIEGMHRELVFQFIEVQTLLLAPICPHLCEHIWSLLGKPDSIMKASWPIAGPVDEILIRSSQYLMEAAHELRLRLKSFMAPVKGKKSTKEPSQKPSHCTIYVAKNYPPWQHTTLSVLRKHYQVSGGQLPDNKVIASELNNLPELKKYMKKVMPFVAMIKENLEKNGSRVLDLELEFDERAVLMENIVYLTNSLELDHIEVKFASEAEDKIKEECCPGKPFSVFRTEPGVSVFLVNPQPSNGHFSTKIEIRQGDNRETVIRRLMKMDRGIKDLSKVKLMRFDDPVLGPRRVPVLGKEEVEKTPILEQAIFHIDLDEKRVHITENGLTKDIGDTIVYLVH
SIO_010081: LARS1
subclass of: SO_0000673
so part of: LARS1
location: join(547963..547968,548765..548883,552136..552223,552929..553009,553441..553581,554674..554835,555098..555210,555602..555665,556195..556262,556603..556828,558205..558292,558394..558470,559121..559174,560162..560302,560946..561023,562037..562122,562215..562280,562381..562463,563118..563256,564766..564978,566420..566477,567396..567459,567993..568176,568417..568506,569425..569565,570165..570305,570409..570519,571647..571757,573301..573405,574537..574632,575530..575662,577631..577836)
location: region:547963-577836:1
so has part: feature:547963-547968:1:exon
so has part: feature:548765-548883:1:exon
so has part: feature:552136-552223:1:exon
so has part: feature:552929-553009:1:exon
so has part: feature:553441-553581:1:exon
so has part: feature:554674-554835:1:exon
so has part: feature:555098-555210:1:exon
so has part: feature:555602-555665:1:exon
so has part: feature:556195-556262:1:exon
so has part: feature:556603-556828:1:exon
so has part: feature:558205-558292:1:exon
so has part: feature:558394-558470:1:exon
so has part: feature:559121-559174:1:exon
so has part: feature:560162-560302:1:exon
so has part: feature:560946-561023:1:exon
so has part: feature:562037-562122:1:exon
so has part: feature:562215-562280:1:exon
so has part: feature:562381-562463:1:exon
so has part: feature:563118-563256:1:exon
so has part: feature:564766-564978:1:exon
so has part: feature:566420-566477:1:exon
so has part: feature:567396-567459:1:exon
so has part: feature:567993-568176:1:exon
so has part: feature:568417-568506:1:exon
so has part: feature:569425-569565:1:exon
so has part: feature:570165-570305:1:exon
so has part: feature:570409-570519:1:exon
so has part: feature:571647-571757:1:exon
so has part: feature:573301-573405:1:exon
so has part: feature:574537-574632:1:exon
so has part: feature:575530-575662:1:exon
so has part: feature:577631-577836:1:exon

XP_040429293.1
type: Protein
SIO_000068: ncbiprotein

position:547963:1
position: 547963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577836:1
position: 577836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547963-547968:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548765-548883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552136-552223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552929-553009:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:553441-553581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554674-554835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555098-555210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555602-555665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:556195-556262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556603-556828:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:558205-558292:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:558394-558470:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559121-559174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:560162-560302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:560946-561023:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562037-562122:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562215-562280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:562381-562463:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:563118-563256:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:564766-564978:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:566420-566477:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:567396-567459:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:567993-568176:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:568417-568506:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:569425-569565:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:570165-570305:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:570409-570519:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:571647-571757:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:573301-573405:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:574537-574632:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:575530-575662:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:577631-577836:1:exon

SH3RF2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(584917..624907)
location: region:584917-624907:-1
so has part: feature:584917-624907:-1:exon
subclass of: SO_0000010

121077923
type: Gene
SIO_000068: ncbigene

position:584917:-1
position: 584917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624907:-1
position: 624907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584917-624907:-1:exon

SH3RF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SH3RF2
product: SH3 domain containing ring finger 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573577.1
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(584917..587574,591608..591902,592637..593004,595433..595665,597225..597395,599430..599524,604871..605194,606933..607028,609489..609758,622761..623253,623827..624907))
location: region:584917-624907:-1
so has part: feature:623827-624907:-1:exon
so has part: feature:622761-623253:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:606933-607028:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595665:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591608-591902:-1:exon
so has part: feature:584917-587574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623827-624907:-1:exon

position:623827:-1
position: 623827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622761-623253:-1:exon

position:622761:-1
position: 622761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623253:-1
position: 623253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609489-609758:-1:exon

position:609489:-1
position: 609489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609758:-1
position: 609758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:606933-607028:-1:exon

position:606933:-1
position: 606933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607028:-1
position: 607028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:604871-605194:-1:exon

position:604871:-1
position: 604871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605194:-1
position: 605194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:599430-599524:-1:exon

position:599430:-1
position: 599430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599524:-1
position: 599524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:597225-597395:-1:exon

position:597225:-1
position: 597225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597395:-1
position: 597395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:595433-595665:-1:exon

position:595433:-1
position: 595433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595665:-1
position: 595665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:592637-593004:-1:exon

position:592637:-1
position: 592637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593004:-1
position: 593004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:591608-591902:-1:exon

position:591608:-1
position: 591608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591902:-1
position: 591902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:584917-587574:-1:exon

position:587574:-1
position: 587574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3RF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SH3RF2
product: SH3 domain containing ring finger 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573575.1
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(584917..590325,591608..591905,592637..593004,595433..595665,597225..597395,599430..599524,604871..605194,606933..607028,609489..609758,622761..623253,623827..624906))
location: region:584917-624906:-1
so has part: feature:623827-624906:-1:exon
so has part: feature:622761-623253:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:606933-607028:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595665:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591608-591905:-1:exon
so has part: feature:584917-590325:-1:exon

position:624906:-1
position: 624906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623827-624906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622761-623253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606933-607028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595433-595665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:591608-591905:-1:exon

position:591905:-1
position: 591905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:584917-590325:-1:exon

position:590325:-1
position: 590325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3RF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SH3RF2
product: SH3 domain containing ring finger 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573578.1
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(584917..587574,591608..591905,592637..593004,595433..595665,597225..597395,599430..599524,604871..605194,609489..609758,622761..623253,623827..624905))
location: region:584917-624905:-1
so has part: feature:623827-624905:-1:exon
so has part: feature:622761-623253:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595665:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591608-591905:-1:exon
so has part: feature:584917-587574:-1:exon

position:624905:-1
position: 624905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623827-624905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622761-623253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595433-595665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591608-591905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:584917-587574:-1:exon

SH3RF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SH3RF2
product: SH3 domain containing ring finger 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573574.1
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(584917..587574,591608..591905,592637..593004,595433..595665,597225..597395,599430..599524,604871..605194,606933..607028,609489..609758,622761..623253,623827..624905))
location: region:584917-624905:-1
so has part: feature:623827-624905:-1:exon
so has part: feature:622761-623253:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:606933-607028:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595665:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591608-591905:-1:exon
so has part: feature:584917-587574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623827-624905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622761-623253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606933-607028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595433-595665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:591608-591905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:584917-587574:-1:exon

SH3RF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SH3RF2
product: SH3 domain containing ring finger 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573576.1
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(584917..587574,591608..591905,592637..593004,595433..595662,597225..597395,599430..599524,604871..605194,606933..607028,609489..609758,622761..623253,623827..624904))
location: region:584917-624904:-1
so has part: feature:623827-624904:-1:exon
so has part: feature:622761-623253:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:606933-607028:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595662:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591608-591905:-1:exon
so has part: feature:584917-587574:-1:exon

position:624904:-1
position: 624904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623827-624904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622761-623253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606933-607028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595433-595662:-1:exon

position:595662:-1
position: 595662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:591608-591905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:584917-587574:-1:exon

SH3RF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2 isoform X4
translation: MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLCGIEQLPSNLLLIRLLDGVRYGQNVPRFGSMQRSGLLSSPASIRRLPRGLQLHQHRLATSPRIHMDGVPRAKALYTYRGHNPGELRFNKGDIIMLLRQLDENWYLGEANGISGVFPASSVQVIKHLPLPPPLCRALYNFDLRSRNKSENKECLTFHKPNTTARQLLQTSKSHWPPPFKCASLRTASPKAKGREPPALHKAPDSRRKSLRPFSITTALNTLNRMVHAPTDRPALEISSPVLISSSNPSVAAPSSEQADAPQGSPAQVSASYYPASGSLGHSAAIVTLPHLQHHLSANMCVALHSYMAHGPDELELQKGEGVRIFGKYHDGWLRGMSLVTGRVGIFPSNYVAPLFSRKPSLSDSKLPSLYASWTLSTASLSSQGSISESGQRQSRPLKVAALPVPVPSPGRSVAALGGTGQASLRRGRGSTRKNGSLQRPGQPGGPAQAAGSLRRPPTATVRPQQFQLYQHISAQPHSIPPAAGVAEAGMRPNFSHDASPVLVVRGGESRTPSVCSSVILDAKDPPAKSEPAPKPPASAPPSILVKPDTSRNSTEKQVKTVRFQNHSPPPPKRHSLQPSPRLPRSRTEPAPVVEPPLPEGSPPGPELPALPSPRLGASPLHPRRALHPKAASLDLSGQLTFPIRKSYSSVSAN
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(591612..591905,592637..593004,595433..595665,597225..597395,599430..599524,604871..605194,609489..609758,622761..623132))
location: region:591612-623132:-1
so has part: feature:622761-623132:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595665:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591612-591905:-1:exon

XP_040429512.1
type: Protein
SIO_000068: ncbiprotein

position:591612:-1
position: 591612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623132:-1
position: 623132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622761-623132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595433-595665:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:591612-591905:-1:exon

SH3RF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2 isoform X2
translation: MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLCGIEQLPSNLLLIRLLDGVRYGQNVPRFGSMQRSGLLSSPASIRRLPRGLQLHQHRLATSPRIHMDGVPRAKALYTYRGHNPGELRFNKGDIIMLLRQLDENWYLGEANGISGVFPASSVQVIKHLPLPPPLCRALYNFDLRSRNKSENKECLTFHKGDIITVISRVDGNWAEGKLGDKVGIFPVLFVEPNTTARQLLQTSKSHWPPPFKCASLRTASPKAKGREPPALHKAPDSRRKSLRPFSITTALNTLNRMVHAPTDRPALEISSPVLISSSNPSVAAPSSEQADAPQGSPAQVSASYYPASGSLGHSAAIVTLPHLQHHLSANMCVALHSYMAHGPDELELQKGEGVRIFGKYHDGWLRGMSLVTGRVGIFPSNYVAPLFRKPSLSDSKLPSLYASWTLSTASLSSQGSISESGQRQSRPLKVAALPVPVPSPGRSVAALGGTGQASLRRGRGSTRKNGSLQRPGQPGGPAQAAGSLRRPPTATVRPQQFQLYQHISAQPHSIPPAAGVAEAGMRPNFSHDASPVLVVRGGESRTPSVCSSVILDAKDPPAKSEPAPKPPASAPPSILVKPDTSRNSTEKQVKTVRFQNHSPPPPKRHSLQPSPRLPRSRTEPAPVVEPPLPEGSPPGPELPALPSPRLGASPLHPRRALHPKAASLDLSGQLTFPIRKSYSSVSAN
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(591612..591905,592637..593004,595433..595662,597225..597395,599430..599524,604871..605194,606933..607028,609489..609758,622761..623132))
location: region:591612-623132:-1
so has part: feature:622761-623132:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:606933-607028:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595662:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591612-591905:-1:exon

XP_040429510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622761-623132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606933-607028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595433-595662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591612-591905:-1:exon

SH3RF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2 isoform X3
translation: MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLCGIEQLPSNLLLIRLLDGVRYGQNVPRFGSMQRSGLLSSPASIRRLPRGLQLHQHRLATSPRIHMDGVPRAKALYTYRGHNPGELRFNKGDIIMLLRQLDENWYLGEANGISGVFPASSVQVIKHLPLPPPLCRALYNFDLRSRNKSENKECLTFHKGDIITVISRVDGNWAEGKLGDKVGIFPVLFVEPNTTARQLLQTSKSHWPPPFKCASLRTASPKAKGREPPALHKAPDSRRKSLRPFSITTALNTLNRMVHAPTDRPALEISSPVLISSSNPSVAAPSSEQADAPQGSPAQVSASYYPASGSLGHSAAIVTLPHLQHHLSANMCVALHSYMAHGPDELELQKGEGVRIFGKYHDGWLRGMSLVTGRVGIFPSNYVAPLFSRKPSLSDSKLPSLYASWTLSTASLSSQGSISESGQRQSRPLKVAALPVPVPSPGRSVAALGGTGQASLRRGRGSTRKNGSLQRPGQPGGPAQAAGSLRRPPTATVRPQQFQLYQHISAQPHSIPPAAGVAEAGMRPNFSHDASPVLVVRGGESRTPSVCSSVILDAKDPPAKSEPAPKPPASAPPSILVKPDTSRNSTEKVKTVRFQNHSPPPPKRHSLQPSPRLPRSRTEPAPVVEPPLPEGSPPGPELPALPSPRLGASPLHPRRALHPKAASLDLSGQLTFPIRKSYSSVSAN
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(591612..591902,592637..593004,595433..595665,597225..597395,599430..599524,604871..605194,606933..607028,609489..609758,622761..623132))
location: region:591612-623132:-1
so has part: feature:622761-623132:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:606933-607028:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595665:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591612-591902:-1:exon

XP_040429511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622761-623132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606933-607028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595433-595665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591612-591902:-1:exon

SH3RF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2 isoform X1
translation: MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLCGIEQLPSNLLLIRLLDGVRYGQNVPRFGSMQRSGLLSSPASIRRLPRGLQLHQHRLATSPRIHMDGVPRAKALYTYRGHNPGELRFNKGDIIMLLRQLDENWYLGEANGISGVFPASSVQVIKHLPLPPPLCRALYNFDLRSRNKSENKECLTFHKGDIITVISRVDGNWAEGKLGDKVGIFPVLFVEPNTTARQLLQTSKSHWPPPFKCASLRTASPKAKGREPPALHKAPDSRRKSLRPFSITTALNTLNRMVHAPTDRPALEISSPVLISSSNPSVAAPSSEQADAPQGSPAQVSASYYPASGSLGHSAAIVTLPHLQHHLSANMCVALHSYMAHGPDELELQKGEGVRIFGKYHDGWLRGMSLVTGRVGIFPSNYVAPLFSRKPSLSDSKLPSLYASWTLSTASLSSQGSISESGQRQSRPLKVAALPVPVPSPGRSVAALGGTGQASLRRGRGSTRKNGSLQRPGQPGGPAQAAGSLRRPPTATVRPQQFQLYQHISAQPHSIPPAAGVAEAGMRPNFSHDASPVLVVRGGESRTPSVCSSVILDAKDPPAKSEPAPKPPASAPPSILVKPDTSRNSTEKQVKTVRFQNHSPPPPKRHSLQPSPRLPRSRTEPAPVVEPPLPEGSPPGPELPALPSPRLGASPLHPRRALHPKAASLDLSGQLTFPIRKSYSSVSAN
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(591612..591905,592637..593004,595433..595665,597225..597395,599430..599524,604871..605194,606933..607028,609489..609758,622761..623132))
location: region:591612-623132:-1
so has part: feature:622761-623132:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:606933-607028:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595665:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591612-591905:-1:exon

XP_040429508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622761-623132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606933-607028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595433-595665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591612-591905:-1:exon

SH3RF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF2 isoform X1
translation: MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLCGIEQLPSNLLLIRLLDGVRYGQNVPRFGSMQRSGLLSSPASIRRLPRGLQLHQHRLATSPRIHMDGVPRAKALYTYRGHNPGELRFNKGDIIMLLRQLDENWYLGEANGISGVFPASSVQVIKHLPLPPPLCRALYNFDLRSRNKSENKECLTFHKGDIITVISRVDGNWAEGKLGDKVGIFPVLFVEPNTTARQLLQTSKSHWPPPFKCASLRTASPKAKGREPPALHKAPDSRRKSLRPFSITTALNTLNRMVHAPTDRPALEISSPVLISSSNPSVAAPSSEQADAPQGSPAQVSASYYPASGSLGHSAAIVTLPHLQHHLSANMCVALHSYMAHGPDELELQKGEGVRIFGKYHDGWLRGMSLVTGRVGIFPSNYVAPLFSRKPSLSDSKLPSLYASWTLSTASLSSQGSISESGQRQSRPLKVAALPVPVPSPGRSVAALGGTGQASLRRGRGSTRKNGSLQRPGQPGGPAQAAGSLRRPPTATVRPQQFQLYQHISAQPHSIPPAAGVAEAGMRPNFSHDASPVLVVRGGESRTPSVCSSVILDAKDPPAKSEPAPKPPASAPPSILVKPDTSRNSTEKQVKTVRFQNHSPPPPKRHSLQPSPRLPRSRTEPAPVVEPPLPEGSPPGPELPALPSPRLGASPLHPRRALHPKAASLDLSGQLTFPIRKSYSSVSAN
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(591612..591905,592637..593004,595433..595665,597225..597395,599430..599524,604871..605194,606933..607028,609489..609758,622761..623132))
location: region:591612-623132:-1
so has part: feature:622761-623132:-1:exon
so has part: feature:609489-609758:-1:exon
so has part: feature:606933-607028:-1:exon
so has part: feature:604871-605194:-1:exon
so has part: feature:599430-599524:-1:exon
so has part: feature:597225-597395:-1:exon
so has part: feature:595433-595665:-1:exon
so has part: feature:592637-593004:-1:exon
so has part: feature:591612-591905:-1:exon

XP_040429509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622761-623132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609489-609758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606933-607028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604871-605194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599430-599524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597225-597395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595433-595665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592637-593004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591612-591905:-1:exon

GRXCR2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GRXCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 631282..641155
location: region:631282-641155:1
so has part: feature:631282-641155:1:exon
subclass of: SO_0000010

121078014
type: Gene
SIO_000068: ncbigene

position:631282:1
position: 631282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641155:1
position: 641155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631282-641155:1:exon

GRXCR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GRXCR2
product: glutaredoxin and cysteine rich domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040573707.1
SIO_010081: GRXCR2
subclass of: SO_0000673
so part of: GRXCR2
location: join(631282..635034,637311..637526,639167..641155)
location: region:631282-641155:1
so has part: feature:631282-635034:1:exon
so has part: feature:637311-637526:1:exon
so has part: feature:639167-641155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631282-635034:1:exon

position:635034:1
position: 635034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637311-637526:1:exon

position:637311:1
position: 637311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637526:1
position: 637526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:639167-641155:1:exon

position:639167:1
position: 639167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRXCR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GRXCR2
product: glutaredoxin and cysteine rich domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573706.1
SIO_010081: GRXCR2
subclass of: SO_0000673
so part of: GRXCR2
location: join(631282..635034,637311..638203)
location: region:631282-638203:1
so has part: feature:631282-635034:1:exon
so has part: feature:637311-638203:1:exon

position:638203:1
position: 638203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631282-635034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637311-638203:1:exon

GRXCR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GRXCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaredoxin domain-containing cysteine-rich protein 2 isoform X2
translation: MDEHQKKLSQRHEGRPRKVRFKISSAYSGRVLKQVYEDGQELEPPAKEQSRRFLRHSFEPGNRPCAAGDAAEGRLCPPAKLSAQRISIFKEDKKYSLASTSPLFSDCPSSDGHCRASPIIDFGKIIIYTNNLKIVRAPMDQKELMRRIVQTEGINDWAFIYQERKGRIGTGHKKEVEKKVACNQYMQEGDAEHTCSQCKGSGSAPCSLCHGSKFSMLANRFRESYRALRCPACNESGLQPCQICAA
SIO_010081: GRXCR2
subclass of: SO_0000673
so part of: GRXCR2
location: join(634690..635034,637311..637526,639167..639346)
location: region:634690-639346:1
so has part: feature:634690-635034:1:exon
so has part: feature:637311-637526:1:exon
so has part: feature:639167-639346:1:exon

XP_040429641.1
type: Protein
SIO_000068: ncbiprotein

position:634690:1
position: 634690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639346:1
position: 639346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634690-635034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637311-637526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639167-639346:1:exon

GRXCR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GRXCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaredoxin domain-containing cysteine-rich protein 2 isoform X1
translation: MDEHQKKLSQRHEGRPRKVRFKISSAYSGRVLKQVYEDGQELEPPAKEQSRRFLRHSFEPGNRPCAAGDAAEGRLCPPAKLSAQRISIFKEDKKYSLASTSPLFSDCPSSDGHCRASPIIDFGKIIIYTNNLKIVRAPMDQKELMRRIVQTEGINDWAFIYQERKGRIGTGHKKEVEKKVACNQYMQVSDNGSCFCSPRLLGLAVPVKQLNIPIQAPSMSVSDTSTKFGLKASLCSSSSMEITNQCCSTVCTLGTAALFPASSCLPLDVSLGDR
SIO_010081: GRXCR2
subclass of: SO_0000673
so part of: GRXCR2
location: join(634690..635034,637311..637790)
location: region:634690-637790:1
so has part: feature:634690-635034:1:exon
so has part: feature:637311-637790:1:exon

XP_040429640.1
type: Protein
SIO_000068: ncbiprotein

position:637790:1
position: 637790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634690-635034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637311-637790:1:exon

PRELID2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: PRELID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 641240..661257
location: region:641240-661257:1
so has part: feature:641240-661257:1:exon
subclass of: SO_0000010

121077782
type: Gene
SIO_000068: ncbigene

position:641240:1
position: 641240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661257:1
position: 661257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641240-661257:1:exon

PRELID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PRELID2
product: PRELI domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040573292.1
SIO_010081: PRELID2
subclass of: SO_0000673
so part of: PRELID2
location: join(641240..641356,647201..647258,649327..649400,651045..651205,653748..653853,659755..661257)
location: region:641240-661257:1
so has part: feature:641240-641356:1:exon
so has part: feature:647201-647258:1:exon
so has part: feature:649327-649400:1:exon
so has part: feature:651045-651205:1:exon
so has part: feature:653748-653853:1:exon
so has part: feature:659755-661257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641240-641356:1:exon

position:641356:1
position: 641356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:647201-647258:1:exon

position:647201:1
position: 647201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647258:1
position: 647258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:649327-649400:1:exon

position:649327:1
position: 649327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649400:1
position: 649400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:651045-651205:1:exon

position:651045:1
position: 651045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651205:1
position: 651205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:653748-653853:1:exon

position:653748:1
position: 653748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653853:1
position: 653853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:659755-661257:1:exon

position:659755:1
position: 659755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRELID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PRELID2
product: PRELI domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573293.1
SIO_010081: PRELID2
subclass of: SO_0000673
so part of: PRELID2
location: join(641240..641356,647201..647258,649327..649400,651045..651205,653748..653853,659240..659305,659755..659853)
location: region:641240-659853:1
so has part: feature:641240-641356:1:exon
so has part: feature:647201-647258:1:exon
so has part: feature:649327-649400:1:exon
so has part: feature:651045-651205:1:exon
so has part: feature:653748-653853:1:exon
so has part: feature:659240-659305:1:exon
so has part: feature:659755-659853:1:exon

position:659853:1
position: 659853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641240-641356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647201-647258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649327-649400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651045-651205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653748-653853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659240-659305:1:exon

position:659240:1
position: 659240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659305:1
position: 659305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:659755-659853:1:exon

PRELID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PRELID2
product: PRELI domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573295.1
SIO_010081: PRELID2
subclass of: SO_0000673
so part of: PRELID2
location: join(641261..641356,651045..651205,653748..653853,659755..661257)
location: region:641261-661257:1
so has part: feature:641261-641356:1:exon
so has part: feature:651045-651205:1:exon
so has part: feature:653748-653853:1:exon
so has part: feature:659755-661257:1:exon

position:641261:1
position: 641261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641261-641356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651045-651205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653748-653853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659755-661257:1:exon

PRELID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PRELID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRELI domain-containing protein 2 isoform X1
translation: MGVTVEVHRVYRYPFEQVVASYLRKYPSPMDKHVMAVETVEEKTDLSTGIIYRRRIATCKNVIPEILRKVSALKVPDIYLEEESWLNMQKRNMSMKTHCLTWTQYASLSEESVFRESLENPNWTDFTQKGRISVTGAGLLNRVLEAFAQSFLKQGVKKEKMHLCSFLGTAYLHCHRNSVAVI
SIO_010081: PRELID2
subclass of: SO_0000673
so part of: PRELID2
location: join(641282..641356,647201..647258,649327..649400,651045..651205,653748..653853,659755..659829)
location: region:641282-659829:1
so has part: feature:641282-641356:1:exon
so has part: feature:647201-647258:1:exon
so has part: feature:649327-649400:1:exon
so has part: feature:651045-651205:1:exon
so has part: feature:653748-653853:1:exon
so has part: feature:659755-659829:1:exon

XP_040429226.1
type: Protein
SIO_000068: ncbiprotein

position:641282:1
position: 641282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659829:1
position: 659829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641282-641356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647201-647258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649327-649400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651045-651205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653748-653853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659755-659829:1:exon

PRELID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PRELID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRELI domain-containing protein 2 isoform X4
translation: MGVTVEVHRVYRYPFEQVVASYLRKVSALKVPDIYLEEESWLNMQKRNMSMKTHCLTWTQYASLSEESVFRESLENPNWTDFTQKGRISVTGAGLLNRVLEAFAQSFLKQGVKKEKMHLCSFLGTAYLHCHRNSVAVI
SIO_010081: PRELID2
subclass of: SO_0000673
so part of: PRELID2
location: join(641282..641356,651045..651205,653748..653853,659755..659829)
location: region:641282-659829:1
so has part: feature:641282-641356:1:exon
so has part: feature:651045-651205:1:exon
so has part: feature:653748-653853:1:exon
so has part: feature:659755-659829:1:exon

XP_040429229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641282-641356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651045-651205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653748-653853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659755-659829:1:exon

PRELID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PRELID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRELI domain-containing protein 2 isoform X2
translation: MGVTVEVHRVYRYPFEQVVASYLRKYPSPMDKHVMAVETVEEKTDLSTGIIYRRRIATCKNVIPEILRKVSALKVPDIYLEEESWLNMQKRNMSMKTHCLTWTQYASLSEESVFRESLENPNWTDFTQKGRISVTGAGLLNRVLEAFAQSFLKQGVKKGIKIMETLLQEQCG
SIO_010081: PRELID2
subclass of: SO_0000673
so part of: PRELID2
location: join(641282..641356,647201..647258,649327..649400,651045..651205,653748..653853,659240..659284)
location: region:641282-659284:1
so has part: feature:641282-641356:1:exon
so has part: feature:647201-647258:1:exon
so has part: feature:649327-649400:1:exon
so has part: feature:651045-651205:1:exon
so has part: feature:653748-653853:1:exon
so has part: feature:659240-659284:1:exon

XP_040429227.1
type: Protein
SIO_000068: ncbiprotein

position:659284:1
position: 659284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641282-641356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647201-647258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649327-649400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651045-651205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653748-653853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659240-659284:1:exon

PRELID2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: PRELID2
product: PRELI domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040573294.1
SIO_010081: PRELID2
subclass of: SO_0000673
so part of: PRELID2
location: join(641513..641727,647201..647258,649327..649400,651045..651205,653748..653853,659755..661257)
location: region:641513-661257:1
so has part: feature:641513-641727:1:exon
so has part: feature:647201-647258:1:exon
so has part: feature:649327-649400:1:exon
so has part: feature:651045-651205:1:exon
so has part: feature:653748-653853:1:exon
so has part: feature:659755-661257:1:exon

position:641513:1
position: 641513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641513-641727:1:exon

position:641727:1
position: 641727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:647201-647258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649327-649400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651045-651205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653748-653853:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659755-661257:1:exon

PRELID2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: PRELID2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRELI domain-containing protein 2 isoform X3
translation: MDKHVMAVETVEEKTDLSTGIIYRRRIATCKNVIPEILRKVSALKVPDIYLEEESWLNMQKRNMSMKTHCLTWTQYASLSEESVFRESLENPNWTDFTQKGRISVTGAGLLNRVLEAFAQSFLKQGVKKEKMHLCSFLGTAYLHCHRNSVAVI
SIO_010081: PRELID2
subclass of: SO_0000673
so part of: PRELID2
location: join(647213..647258,649327..649400,651045..651205,653748..653853,659755..659829)
location: region:647213-659829:1
so has part: feature:647213-647258:1:exon
so has part: feature:649327-649400:1:exon
so has part: feature:651045-651205:1:exon
so has part: feature:653748-653853:1:exon
so has part: feature:659755-659829:1:exon

XP_040429228.1
type: Protein
SIO_000068: ncbiprotein

position:647213:1
position: 647213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647213-647258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649327-649400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651045-651205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653748-653853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659755-659829:1:exon

LOC121077929
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 717912..747317
location: region:717912-747317:1
so has part: feature:717912-747317:1:exon
subclass of: SO_0000011

121077929
type: Gene
SIO_000068: ncbigene

position:717912:1
position: 717912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747317:1
position: 747317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717912-747317:1:exon

LOC121077929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077929
product: uncharacterized LOC121077929, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824371.1
SIO_010081: LOC121077929
subclass of: SO_0000673
so part of: LOC121077929
location: join(717912..718066,725503..728330,728978..729176,731337..734156,735634..735816,738563..739124,743546..747317)
location: region:717912-747317:1
so has part: feature:717912-718066:1:exon
so has part: feature:725503-728330:1:exon
so has part: feature:728978-729176:1:exon
so has part: feature:731337-734156:1:exon
so has part: feature:735634-735816:1:exon
so has part: feature:738563-739124:1:exon
so has part: feature:743546-747317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717912-718066:1:exon

position:718066:1
position: 718066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725503-728330:1:exon

position:725503:1
position: 725503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728330:1
position: 728330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:728978-729176:1:exon

position:728978:1
position: 728978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729176:1
position: 729176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:731337-734156:1:exon

position:731337:1
position: 731337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734156:1
position: 734156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735634-735816:1:exon

position:735634:1
position: 735634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735816:1
position: 735816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:738563-739124:1:exon

position:738563:1
position: 738563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739124:1
position: 739124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:743546-747317:1:exon

position:743546:1
position: 743546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121077929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077929
product: uncharacterized LOC121077929, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824370.1
SIO_010081: LOC121077929
subclass of: SO_0000673
so part of: LOC121077929
location: join(723711..723897,725503..728330,728978..729176,731337..734156,735634..735816,738563..739124,743546..747317)
location: region:723711-747317:1
so has part: feature:723711-723897:1:exon
so has part: feature:725503-728330:1:exon
so has part: feature:728978-729176:1:exon
so has part: feature:731337-734156:1:exon
so has part: feature:735634-735816:1:exon
so has part: feature:738563-739124:1:exon
so has part: feature:743546-747317:1:exon

position:723711:1
position: 723711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723711-723897:1:exon

position:723897:1
position: 723897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725503-728330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:728978-729176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731337-734156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735634-735816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738563-739124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:743546-747317:1:exon

LOC121077929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077929
product: uncharacterized LOC121077929, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005824372.1
SIO_010081: LOC121077929
subclass of: SO_0000673
so part of: LOC121077929
location: join(723711..723897,725503..728330,728978..729176,731337..732566,734018..734156,735634..735816,738563..739124,743546..747317)
location: region:723711-747317:1
so has part: feature:723711-723897:1:exon
so has part: feature:725503-728330:1:exon
so has part: feature:728978-729176:1:exon
so has part: feature:731337-732566:1:exon
so has part: feature:734018-734156:1:exon
so has part: feature:735634-735816:1:exon
so has part: feature:738563-739124:1:exon
so has part: feature:743546-747317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723711-723897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725503-728330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:728978-729176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731337-732566:1:exon

position:732566:1
position: 732566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:734018-734156:1:exon

position:734018:1
position: 734018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:735634-735816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738563-739124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:743546-747317:1:exon

LOC121077931
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 754018..755876
location: region:754018-755876:1
so has part: feature:754018-755876:1:exon
subclass of: SO_0000011

121077931
type: Gene
SIO_000068: ncbigene

position:754018:1
position: 754018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755876:1
position: 755876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754018-755876:1:exon

LOC121077931
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077931
product: uncharacterized LOC121077931
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824373.1
SIO_010081: LOC121077931
subclass of: SO_0000673
so part of: LOC121077931
location: join(754018..754216,755353..755442,755532..755876)
location: region:754018-755876:1
so has part: feature:754018-754216:1:exon
so has part: feature:755353-755442:1:exon
so has part: feature:755532-755876:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:754018-754216:1:exon

position:754216:1
position: 754216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:755353-755442:1:exon

position:755353:1
position: 755353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755442:1
position: 755442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:755532-755876:1:exon

position:755532:1
position: 755532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121078067
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 770750..771743
location: region:770750-771743:1
so has part: feature:770750-771743:1:exon
subclass of: SO_0000011

121078067
type: Gene
SIO_000068: ncbigene

position:770750:1
position: 770750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771743:1
position: 771743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770750-771743:1:exon

LOC121078067
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078067
product: uncharacterized LOC121078067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824450.1
SIO_010081: LOC121078067
subclass of: SO_0000673
so part of: LOC121078067
location: join(770750..770961,771550..771743)
location: region:770750-771743:1
so has part: feature:770750-770961:1:exon
so has part: feature:771550-771743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770750-770961:1:exon

position:770961:1
position: 770961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:771550-771743:1:exon

position:771550:1
position: 771550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121078066
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 841308..853223
location: region:841308-853223:1
so has part: feature:841308-853223:1:exon
subclass of: SO_0000011

121078066
type: Gene
SIO_000068: ncbigene

position:841308:1
position: 841308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853223:1
position: 853223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841308-853223:1:exon

LOC121078066
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078066
product: uncharacterized LOC121078066, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824448.1
SIO_010081: LOC121078066
subclass of: SO_0000673
so part of: LOC121078066
location: join(841308..841537,843442..843660,850642..850735,852073..853223)
location: region:841308-853223:1
so has part: feature:841308-841537:1:exon
so has part: feature:843442-843660:1:exon
so has part: feature:850642-850735:1:exon
so has part: feature:852073-853223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:841308-841537:1:exon

position:841537:1
position: 841537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:843442-843660:1:exon

position:843442:1
position: 843442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843660:1
position: 843660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:850642-850735:1:exon

position:850642:1
position: 850642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850735:1
position: 850735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:852073-853223:1:exon

position:852073:1
position: 852073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121078066
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078066
product: uncharacterized LOC121078066, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824449.1
SIO_010081: LOC121078066
subclass of: SO_0000673
so part of: LOC121078066
location: join(841308..841537,843442..843660,850642..850735,852085..853223)
location: region:841308-853223:1
so has part: feature:841308-841537:1:exon
so has part: feature:843442-843660:1:exon
so has part: feature:850642-850735:1:exon
so has part: feature:852085-853223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:841308-841537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843442-843660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850642-850735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852085-853223:1:exon

position:852085:1
position: 852085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCTD16
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: KCTD16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(883371..946804)
location: region:883371-946804:-1
so has part: feature:883371-946804:-1:exon
subclass of: SO_0000010

121077919
type: Gene
SIO_000068: ncbigene

position:883371:-1
position: 883371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946804:-1
position: 946804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883371-946804:-1:exon

KCTD16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: KCTD16
product: potassium channel tetramerization domain containing 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040573571.1
SIO_010081: KCTD16
subclass of: SO_0000673
so part of: KCTD16
location: complement(join(883371..886155,944999..946159,946427..946804))
location: region:883371-946804:-1
so has part: feature:946427-946804:-1:exon
so has part: feature:944999-946159:-1:exon
so has part: feature:883371-886155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946427-946804:-1:exon

position:946427:-1
position: 946427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:944999-946159:-1:exon

position:944999:-1
position: 944999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946159:-1
position: 946159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:883371-886155:-1:exon

position:886155:-1
position: 886155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCTD16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: KCTD16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16
translation: MALSGNCRTYLPAREQGTGLHSFPEVVELNVGGQVYFTRHSTLVGTPHSLLWKMFTPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDKQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDDSKQSPDDYCHSDYEEVSQGSDTRICPPSSLLPSDRKWGFITIGYRGSCTIGRESQADAKFRRVPRILVCGRIALVKEVFGESLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVSQYTDDKVWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKEGESGTSCNELSTSSCDSQSEASSPQETVICGPVTRQPNIQTLDRPAKKGPVQLLQQSESRRKSDLLRTLTSGSRESNSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSELLRKYHL
SIO_010081: KCTD16
subclass of: SO_0000673
so part of: KCTD16
location: complement(join(885704..886155,944999..945830))
location: region:885704-945830:-1
so has part: feature:944999-945830:-1:exon
so has part: feature:885704-886155:-1:exon

XP_040429505.1
type: Protein
SIO_000068: ncbiprotein

position:885704:-1
position: 885704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945830:-1
position: 945830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944999-945830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:885704-886155:-1:exon

LOC121077920
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 927549..937686
location: region:927549-937686:1
so has part: feature:927549-937686:1:exon
subclass of: SO_0000011

121077920
type: Gene
SIO_000068: ncbigene

position:927549:1
position: 927549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937686:1
position: 937686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927549-937686:1:exon

LOC121077920
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077920
product: uncharacterized LOC121077920, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824366.1
SIO_010081: LOC121077920
subclass of: SO_0000673
so part of: LOC121077920
location: join(927549..927654,932789..933031,933313..937686)
location: region:927549-937686:1
so has part: feature:927549-927654:1:exon
so has part: feature:932789-933031:1:exon
so has part: feature:933313-937686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927549-927654:1:exon

position:927654:1
position: 927654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:932789-933031:1:exon

position:932789:1
position: 932789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933031:1
position: 933031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:933313-937686:1:exon

position:933313:1
position: 933313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121077920
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077920
product: uncharacterized LOC121077920, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824365.1
SIO_010081: LOC121077920
subclass of: SO_0000673
so part of: LOC121077920
location: join(927549..927654,932789..933031,933628..937686)
location: region:927549-937686:1
so has part: feature:927549-927654:1:exon
so has part: feature:932789-933031:1:exon
so has part: feature:933628-937686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927549-927654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932789-933031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933628-937686:1:exon

position:933628:1
position: 933628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121077920
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077920
product: uncharacterized LOC121077920, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824367.1
SIO_010081: LOC121077920
subclass of: SO_0000673
so part of: LOC121077920
location: join(927549..927654,932789..933031,933628..934039,934345..937686)
location: region:927549-937686:1
so has part: feature:927549-927654:1:exon
so has part: feature:932789-933031:1:exon
so has part: feature:933628-934039:1:exon
so has part: feature:934345-937686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927549-927654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932789-933031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933628-934039:1:exon

position:934039:1
position: 934039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934345-937686:1:exon

position:934345:1
position: 934345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YIPF5
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 953724..960170
location: region:953724-960170:1
so has part: feature:953724-960170:1:exon
subclass of: SO_0000010

121077908
type: Gene
SIO_000068: ncbigene

position:953724:1
position: 953724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960170:1
position: 960170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953724-960170:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: YIPF5
product: Yip1 domain family member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573556.1
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(953724..953856,953943..954065,955696..955865,957127..957272,958321..958502,959116..960170)
location: region:953724-960170:1
so has part: feature:953724-953856:1:exon
so has part: feature:953943-954065:1:exon
so has part: feature:955696-955865:1:exon
so has part: feature:957127-957272:1:exon
so has part: feature:958321-958502:1:exon
so has part: feature:959116-960170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:953724-953856:1:exon

position:953856:1
position: 953856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:953943-954065:1:exon

position:953943:1
position: 953943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954065:1
position: 954065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:955696-955865:1:exon

position:955696:1
position: 955696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955865:1
position: 955865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957127-957272:1:exon

position:957127:1
position: 957127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957272:1
position: 957272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958321-958502:1:exon

position:958321:1
position: 958321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958502:1
position: 958502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:959116-960170:1:exon

position:959116:1
position: 959116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5 isoform X1
translation: MLAGGAPLRVSHACAAAPEAAGGRVTRRSAAAGGPGRGGCGRGRGRVREMSGFDSFTTDFFQTGYSIDEQAQHYEYGGGGRPYGRQYGGYEYSQQSGFVPPEMMQQQPYTGQIYQPTQTYTPTSAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSTFAIVFSLQGVMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(953726..953856,953943..954065,955696..955865,957127..957272,958321..958502,959116..959278)
location: region:953726-959278:1
so has part: feature:953726-953856:1:exon
so has part: feature:953943-954065:1:exon
so has part: feature:955696-955865:1:exon
so has part: feature:957127-957272:1:exon
so has part: feature:958321-958502:1:exon
so has part: feature:959116-959278:1:exon

XP_040429490.1
type: Protein
SIO_000068: ncbiprotein

position:953726:1
position: 953726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959278:1
position: 959278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953726-953856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:953943-954065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:955696-955865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957127-957272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958321-958502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959116-959278:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: YIPF5
product: Yip1 domain family member 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 166 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573558.1
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(953739..953837,953945..954065,955696..955865,957127..957272,958321..958502,959116..960170)
location: region:953739-960170:1
so has part: feature:953739-953837:1:exon
so has part: feature:953945-954065:1:exon
so has part: feature:955696-955865:1:exon
so has part: feature:957127-957272:1:exon
so has part: feature:958321-958502:1:exon
so has part: feature:959116-960170:1:exon

position:953739:1
position: 953739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953739-953837:1:exon

position:953837:1
position: 953837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:953945-954065:1:exon

position:953945:1
position: 953945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:955696-955865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957127-957272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958321-958502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959116-960170:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: YIPF5
product: Yip1 domain family member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573557.1
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(953782..953841,953945..954065,955696..955865,957127..957272,958321..958502,959116..960170)
location: region:953782-960170:1
so has part: feature:953782-953841:1:exon
so has part: feature:953945-954065:1:exon
so has part: feature:955696-955865:1:exon
so has part: feature:957127-957272:1:exon
so has part: feature:958321-958502:1:exon
so has part: feature:959116-960170:1:exon

position:953782:1
position: 953782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953782-953841:1:exon

position:953841:1
position: 953841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:953945-954065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:955696-955865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957127-957272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958321-958502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959116-960170:1:exon

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5 isoform X2
translation: MSGFDSFTTDFFQTGYSIDEQAQHYEYGGGGRPYGRQYGGYEYSQQSGFVPPEMMQQQPYTGQIYQPTQTYTPTSAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSTFAIVFSLQGVMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(953959..954065,955696..955865,957127..957272,958321..958502,959116..959278)
location: region:953959-959278:1
so has part: feature:953959-954065:1:exon
so has part: feature:955696-955865:1:exon
so has part: feature:957127-957272:1:exon
so has part: feature:958321-958502:1:exon
so has part: feature:959116-959278:1:exon

XP_040429491.1
type: Protein
SIO_000068: ncbiprotein

position:953959:1
position: 953959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953959-954065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:955696-955865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957127-957272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958321-958502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959116-959278:1:exon

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5 isoform X2
translation: MSGFDSFTTDFFQTGYSIDEQAQHYEYGGGGRPYGRQYGGYEYSQQSGFVPPEMMQQQPYTGQIYQPTQTYTPTSAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSTFAIVFSLQGVMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(953959..954065,955696..955865,957127..957272,958321..958502,959116..959278)
location: region:953959-959278:1
so has part: feature:953959-954065:1:exon
so has part: feature:955696-955865:1:exon
so has part: feature:957127-957272:1:exon
so has part: feature:958321-958502:1:exon
so has part: feature:959116-959278:1:exon

XP_040429492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:953959-954065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:955696-955865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957127-957272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958321-958502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959116-959278:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: YIPF5
product: Yip1 domain family member 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040573559.1
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(955145..955228,955696..955865,957127..957272,958321..958502,959116..960170)
location: region:955145-960170:1
so has part: feature:955145-955228:1:exon
so has part: feature:955696-955865:1:exon
so has part: feature:957127-957272:1:exon
so has part: feature:958321-958502:1:exon
so has part: feature:959116-960170:1:exon

position:955145:1
position: 955145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955145-955228:1:exon

position:955228:1
position: 955228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:955696-955865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957127-957272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:958321-958502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959116-960170:1:exon

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5 isoform X3
translation: MMQQQPYTGQIYQPTQTYTPTSAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSTFAIVFSLQGVMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(955748..955865,957127..957272,958321..958502,959116..959278)
location: region:955748-959278:1
so has part: feature:955748-955865:1:exon
so has part: feature:957127-957272:1:exon
so has part: feature:958321-958502:1:exon
so has part: feature:959116-959278:1:exon

XP_040429493.1
type: Protein
SIO_000068: ncbiprotein

position:955748:1
position: 955748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955748-955865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957127-957272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958321-958502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:959116-959278:1:exon

LOC121077963
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 975394..1031908
location: region:975394-1031908:1
so has part: feature:975394-1031908:1:exon
subclass of: SO_0000011

121077963
type: Gene
SIO_000068: ncbigene

position:975394:1
position: 975394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031908:1
position: 1031908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975394-1031908:1:exon

LOC121077963
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077963
product: uncharacterized LOC121077963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005824390.1
SIO_010081: LOC121077963
subclass of: SO_0000673
so part of: LOC121077963
location: join(975394..975452,1004590..1004689,1015966..1016191,1017103..1017200,1019024..1019161,1020017..1020110,1031846..1031908)
location: region:975394-1031908:1
so has part: feature:975394-975452:1:exon
so has part: feature:1004590-1004689:1:exon
so has part: feature:1015966-1016191:1:exon
so has part: feature:1017103-1017200:1:exon
so has part: feature:1019024-1019161:1:exon
so has part: feature:1020017-1020110:1:exon
so has part: feature:1031846-1031908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:975394-975452:1:exon

position:975452:1
position: 975452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1004590-1004689:1:exon

position:1004590:1
position: 1004590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004689:1
position: 1004689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1015966-1016191:1:exon

position:1015966:1
position: 1015966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016191:1
position: 1016191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1017103-1017200:1:exon

position:1017103:1
position: 1017103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017200:1
position: 1017200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1019024-1019161:1:exon

position:1019024:1
position: 1019024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019161:1
position: 1019161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1020017-1020110:1:exon

position:1020017:1
position: 1020017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020110:1
position: 1020110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1031846-1031908:1:exon

position:1031846:1
position: 1031846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121077964
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1032183..1034794)
location: region:1032183-1034794:-1
so has part: feature:1032183-1034794:-1:exon
subclass of: SO_0000011

121077964
type: Gene
SIO_000068: ncbigene

position:1032183:-1
position: 1032183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034794:-1
position: 1034794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032183-1034794:-1:exon

LOC121077964
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077964
product: uncharacterized LOC121077964
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824391.1
SIO_010081: LOC121077964
subclass of: SO_0000673
so part of: LOC121077964
location: complement(join(1032183..1033056,1034005..1034152,1034359..1034794))
location: region:1032183-1034794:-1
so has part: feature:1034359-1034794:-1:exon
so has part: feature:1034005-1034152:-1:exon
so has part: feature:1032183-1033056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034359-1034794:-1:exon

position:1034359:-1
position: 1034359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034005-1034152:-1:exon

position:1034005:-1
position: 1034005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034152:-1
position: 1034152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1032183-1033056:-1:exon

position:1033056:-1
position: 1033056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121078065
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121078065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1035236..1057246
location: region:1035236-1057246:1
so has part: feature:1035236-1057246:1:exon
subclass of: SO_0000011

121078065
type: Gene
SIO_000068: ncbigene

position:1035236:1
position: 1035236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057246:1
position: 1057246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035236-1057246:1:exon

LOC121078065
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121078065
product: uncharacterized LOC121078065
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824447.1
SIO_010081: LOC121078065
subclass of: SO_0000673
so part of: LOC121078065
location: join(1035236..1035272,1035765..1035904,1057005..1057246)
location: region:1035236-1057246:1
so has part: feature:1035236-1035272:1:exon
so has part: feature:1035765-1035904:1:exon
so has part: feature:1057005-1057246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1035236-1035272:1:exon

position:1035272:1
position: 1035272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1035765-1035904:1:exon

position:1035765:1
position: 1035765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035904:1
position: 1035904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057005-1057246:1:exon

position:1057005:1
position: 1057005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121077775
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1097191..1104185)
location: region:1097191-1104185:-1
so has part: feature:1097191-1104185:-1:exon
subclass of: SO_0000011

121077775
type: Gene
SIO_000068: ncbigene

position:1097191:-1
position: 1097191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104185:-1
position: 1104185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1097191-1104185:-1:exon

LOC121077775
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077775
product: uncharacterized LOC121077775, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005824307.1
SIO_010081: LOC121077775
subclass of: SO_0000673
so part of: LOC121077775
location: complement(join(1097191..1100988,1102284..1104185))
location: region:1097191-1104185:-1
so has part: feature:1102284-1104185:-1:exon
so has part: feature:1097191-1100988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102284-1104185:-1:exon

position:1102284:-1
position: 1102284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1097191-1100988:-1:exon

position:1100988:-1
position: 1100988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121077775
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077775
product: uncharacterized LOC121077775, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005824308.1
SIO_010081: LOC121077775
subclass of: SO_0000673
so part of: LOC121077775
location: complement(join(1097191..1100988,1102171..1104185))
location: region:1097191-1104185:-1
so has part: feature:1102171-1104185:-1:exon
so has part: feature:1097191-1100988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102171-1104185:-1:exon

position:1102171:-1
position: 1102171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1097191-1100988:-1:exon

LOC121077775
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077775
product: uncharacterized LOC121077775, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005824309.1
SIO_010081: LOC121077775
subclass of: SO_0000673
so part of: LOC121077775
location: complement(join(1097191..1097866,1100839..1100988,1102284..1104170))
location: region:1097191-1104170:-1
so has part: feature:1102284-1104170:-1:exon
so has part: feature:1100839-1100988:-1:exon
so has part: feature:1097191-1097866:-1:exon

position:1104170:-1
position: 1104170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102284-1104170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1100839-1100988:-1:exon

position:1100839:-1
position: 1100839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1097191-1097866:-1:exon

position:1097866:-1
position: 1097866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR3C1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1114929..1182872
location: region:1114929-1182872:1
so has part: feature:1114929-1182872:1:exon
subclass of: SO_0000010

121077774
type: Gene
SIO_000068: ncbigene

position:1114929:1
position: 1114929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182872:1
position: 1182872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114929-1182872:1:exon

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 long SRA reads, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573278.1
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1114929..1115478,1117479..1118668,1156095..1156258,1160365..1160481,1164665..1164943,1167509..1167653,1174434..1174564,1177398..1177555,1178492..1182872)
location: region:1114929-1182872:1
so has part: feature:1114929-1115478:1:exon
so has part: feature:1117479-1118668:1:exon
so has part: feature:1156095-1156258:1:exon
so has part: feature:1160365-1160481:1:exon
so has part: feature:1164665-1164943:1:exon
so has part: feature:1167509-1167653:1:exon
so has part: feature:1174434-1174564:1:exon
so has part: feature:1177398-1177555:1:exon
so has part: feature:1178492-1182872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1114929-1115478:1:exon

position:1115478:1
position: 1115478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1117479-1118668:1:exon

position:1117479:1
position: 1117479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118668:1
position: 1118668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1156095-1156258:1:exon

position:1156095:1
position: 1156095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156258:1
position: 1156258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1160365-1160481:1:exon

position:1160365:1
position: 1160365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160481:1
position: 1160481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1164665-1164943:1:exon

position:1164665:1
position: 1164665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164943:1
position: 1164943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1167509-1167653:1:exon

position:1167509:1
position: 1167509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167653:1
position: 1167653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1174434-1174564:1:exon

position:1174434:1
position: 1174434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174564:1
position: 1174564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1177398-1177555:1:exon

position:1177398:1
position: 1177398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177555:1
position: 1177555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1178492-1182872:1:exon

position:1178492:1
position: 1178492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92 long SRA reads, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_040573276.1
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1114931..1115443,1117479..1118668,1156095..1156258,1160365..1160481,1164665..1164943,1167509..1167653,1174434..1174564,1177398..1177555,1178492..1182872)
location: region:1114931-1182872:1
so has part: feature:1114931-1115443:1:exon
so has part: feature:1117479-1118668:1:exon
so has part: feature:1156095-1156258:1:exon
so has part: feature:1160365-1160481:1:exon
so has part: feature:1164665-1164943:1:exon
so has part: feature:1167509-1167653:1:exon
so has part: feature:1174434-1174564:1:exon
so has part: feature:1177398-1177555:1:exon
so has part: feature:1178492-1182872:1:exon

position:1114931:1
position: 1114931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114931-1115443:1:exon

position:1115443:1
position: 1115443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1117479-1118668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156095-1156258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160365-1160481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164665-1164943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167509-1167653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174434-1174564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1177398-1177555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178492-1182872:1:exon

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 long SRA reads, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040573275.1
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1115705..1116227,1117479..1118668,1156095..1156258,1160365..1160481,1164665..1164943,1167509..1167653,1174434..1174564,1177398..1177555,1178492..1182872)
location: region:1115705-1182872:1
so has part: feature:1115705-1116227:1:exon
so has part: feature:1117479-1118668:1:exon
so has part: feature:1156095-1156258:1:exon
so has part: feature:1160365-1160481:1:exon
so has part: feature:1164665-1164943:1:exon
so has part: feature:1167509-1167653:1:exon
so has part: feature:1174434-1174564:1:exon
so has part: feature:1177398-1177555:1:exon
so has part: feature:1178492-1182872:1:exon

position:1115705:1
position: 1115705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115705-1116227:1:exon

position:1116227:1
position: 1116227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1117479-1118668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156095-1156258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160365-1160481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164665-1164943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167509-1167653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174434-1174564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1177398-1177555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178492-1182872:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X1
translation: MAVPRSPALLGEGPAAAGPFCAPRFGFGSEAAVRAPCRCPRHGSGGLAARETRLMLKVMDSKELLNSSDQDETRKNVLISTKGGIVMDFHPPFRGGAPVQAPVSTSPLPVSSHSDSNQQPALADFSKGLVNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSQQGQIGISSGETDFRLLEESIASLNKSSSLAEDAKGAASSEVPLEPDFPGMAGRSVPLEPGASVQSQVGSNGGNLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISTDDAFLLEGNSGEDCKPPILSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQENMGPIYCQANFSGSNLLGTKVSAISIHGVSTSGGQMYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDETLAPLGTLNLSGRPAFSNGYSSPGIRSDVSSSPSTTSATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQANVTGTRDVSETPGNKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSTLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1116069..1116227,1117479..1118668,1156095..1156258,1160365..1160481,1164665..1164943,1167509..1167653,1174434..1174564,1177398..1177555,1178492..1178644)
location: region:1116069-1178644:1
so has part: feature:1116069-1116227:1:exon
so has part: feature:1117479-1118668:1:exon
so has part: feature:1156095-1156258:1:exon
so has part: feature:1160365-1160481:1:exon
so has part: feature:1164665-1164943:1:exon
so has part: feature:1167509-1167653:1:exon
so has part: feature:1174434-1174564:1:exon
so has part: feature:1177398-1177555:1:exon
so has part: feature:1178492-1178644:1:exon

XP_040429209.1
type: Protein
SIO_000068: ncbiprotein

position:1116069:1
position: 1116069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178644:1
position: 1178644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116069-1116227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1117479-1118668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156095-1156258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160365-1160481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164665-1164943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167509-1167653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174434-1174564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1177398-1177555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178492-1178644:1:exon

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 long SRA reads, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040573277.1
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1116548..1117030,1117479..1118668,1156095..1156258,1160365..1160481,1164665..1164943,1167509..1167653,1174434..1174564,1177398..1177555,1178492..1182872)
location: region:1116548-1182872:1
so has part: feature:1116548-1117030:1:exon
so has part: feature:1117479-1118668:1:exon
so has part: feature:1156095-1156258:1:exon
so has part: feature:1160365-1160481:1:exon
so has part: feature:1164665-1164943:1:exon
so has part: feature:1167509-1167653:1:exon
so has part: feature:1174434-1174564:1:exon
so has part: feature:1177398-1177555:1:exon
so has part: feature:1178492-1182872:1:exon

position:1116548:1
position: 1116548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116548-1117030:1:exon

position:1117030:1
position: 1117030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1117479-1118668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156095-1156258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160365-1160481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164665-1164943:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167509-1167653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174434-1174564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1177398-1177555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178492-1182872:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X2
translation: MLKVMDSKELLNSSDQDETRKNVLISTKGGIVMDFHPPFRGGAPVQAPVSTSPLPVSSHSDSNQQPALADFSKGLVNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSQQGQIGISSGETDFRLLEESIASLNKSSSLAEDAKGAASSEVPLEPDFPGMAGRSVPLEPGASVQSQVGSNGGNLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISTDDAFLLEGNSGEDCKPPILSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQENMGPIYCQANFSGSNLLGTKVSAISIHGVSTSGGQMYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDETLAPLGTLNLSGRPAFSNGYSSPGIRSDVSSSPSTTSATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQANVTGTRDVSETPGNKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSTLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1117482..1118668,1156095..1156258,1160365..1160481,1164665..1164943,1167509..1167653,1174434..1174564,1177398..1177555,1178492..1178644)
location: region:1117482-1178644:1
so has part: feature:1117482-1118668:1:exon
so has part: feature:1156095-1156258:1:exon
so has part: feature:1160365-1160481:1:exon
so has part: feature:1164665-1164943:1:exon
so has part: feature:1167509-1167653:1:exon
so has part: feature:1174434-1174564:1:exon
so has part: feature:1177398-1177555:1:exon
so has part: feature:1178492-1178644:1:exon

XP_040429210.1
type: Protein
SIO_000068: ncbiprotein

position:1117482:1
position: 1117482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117482-1118668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156095-1156258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160365-1160481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164665-1164943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1167509-1167653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1174434-1174564:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177398-1177555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1178492-1178644:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X2
translation: MLKVMDSKELLNSSDQDETRKNVLISTKGGIVMDFHPPFRGGAPVQAPVSTSPLPVSSHSDSNQQPALADFSKGLVNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSQQGQIGISSGETDFRLLEESIASLNKSSSLAEDAKGAASSEVPLEPDFPGMAGRSVPLEPGASVQSQVGSNGGNLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISTDDAFLLEGNSGEDCKPPILSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQENMGPIYCQANFSGSNLLGTKVSAISIHGVSTSGGQMYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDETLAPLGTLNLSGRPAFSNGYSSPGIRSDVSSSPSTTSATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQANVTGTRDVSETPGNKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSTLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1117482..1118668,1156095..1156258,1160365..1160481,1164665..1164943,1167509..1167653,1174434..1174564,1177398..1177555,1178492..1178644)
location: region:1117482-1178644:1
so has part: feature:1117482-1118668:1:exon
so has part: feature:1156095-1156258:1:exon
so has part: feature:1160365-1160481:1:exon
so has part: feature:1164665-1164943:1:exon
so has part: feature:1167509-1167653:1:exon
so has part: feature:1174434-1174564:1:exon
so has part: feature:1177398-1177555:1:exon
so has part: feature:1178492-1178644:1:exon

XP_040429211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1117482-1118668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156095-1156258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160365-1160481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164665-1164943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1167509-1167653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1174434-1174564:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177398-1177555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1178492-1178644:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor isoform X2
translation: MLKVMDSKELLNSSDQDETRKNVLISTKGGIVMDFHPPFRGGAPVQAPVSTSPLPVSSHSDSNQQPALADFSKGLVNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSQQGQIGISSGETDFRLLEESIASLNKSSSLAEDAKGAASSEVPLEPDFPGMAGRSVPLEPGASVQSQVGSNGGNLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISTDDAFLLEGNSGEDCKPPILSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQENMGPIYCQANFSGSNLLGTKVSAISIHGVSTSGGQMYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDETLAPLGTLNLSGRPAFSNGYSSPGIRSDVSSSPSTTSATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQANVTGTRDVSETPGNKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSTLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(1117482..1118668,1156095..1156258,1160365..1160481,1164665..1164943,1167509..1167653,1174434..1174564,1177398..1177555,1178492..1178644)
location: region:1117482-1178644:1
so has part: feature:1117482-1118668:1:exon
so has part: feature:1156095-1156258:1:exon
so has part: feature:1160365-1160481:1:exon
so has part: feature:1164665-1164943:1:exon
so has part: feature:1167509-1167653:1:exon
so has part: feature:1174434-1174564:1:exon
so has part: feature:1177398-1177555:1:exon
so has part: feature:1178492-1178644:1:exon

XP_040429212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1117482-1118668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156095-1156258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160365-1160481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164665-1164943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1167509-1167653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1174434-1174564:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177398-1177555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1178492-1178644:1:exon

ARHGAP26
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1195315..1327392)
location: region:1195315-1327392:-1
so has part: feature:1195315-1327392:-1:exon
subclass of: SO_0000010

121077716
type: Gene
SIO_000068: ncbigene

position:1195315:-1
position: 1195315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327392:-1
position: 1327392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195315-1327392:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573146.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1195315..1196863,1200433..1200524,1203175..1203285,1224914..1225067,1230389..1230527,1238201..1238360,1255669..1255774,1256754..1256812,1257954..1258041,1265609..1265683,1267038..1267103,1273860..1273896,1290490..1290568,1298665..1298759,1300801..1300901,1301241..1301370,1302311..1302415,1303320..1303430,1305625..1305726,1307508..1307579,1308055..1308116,1309040..1309135,1327074..1327392))
location: region:1195315-1327392:-1
so has part: feature:1327074-1327392:-1:exon
so has part: feature:1309040-1309135:-1:exon
so has part: feature:1308055-1308116:-1:exon
so has part: feature:1307508-1307579:-1:exon
so has part: feature:1305625-1305726:-1:exon
so has part: feature:1303320-1303430:-1:exon
so has part: feature:1302311-1302415:-1:exon
so has part: feature:1301241-1301370:-1:exon
so has part: feature:1300801-1300901:-1:exon
so has part: feature:1298665-1298759:-1:exon
so has part: feature:1290490-1290568:-1:exon
so has part: feature:1273860-1273896:-1:exon
so has part: feature:1267038-1267103:-1:exon
so has part: feature:1265609-1265683:-1:exon
so has part: feature:1257954-1258041:-1:exon
so has part: feature:1256754-1256812:-1:exon
so has part: feature:1255669-1255774:-1:exon
so has part: feature:1238201-1238360:-1:exon
so has part: feature:1230389-1230527:-1:exon
so has part: feature:1224914-1225067:-1:exon
so has part: feature:1203175-1203285:-1:exon
so has part: feature:1200433-1200524:-1:exon
so has part: feature:1195315-1196863:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1327074-1327392:-1:exon

position:1327074:-1
position: 1327074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1309040-1309135:-1:exon

position:1309040:-1
position: 1309040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309135:-1
position: 1309135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1308055-1308116:-1:exon

position:1308055:-1
position: 1308055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308116:-1
position: 1308116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1307508-1307579:-1:exon

position:1307508:-1
position: 1307508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307579:-1
position: 1307579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1305625-1305726:-1:exon

position:1305625:-1
position: 1305625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305726:-1
position: 1305726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1303320-1303430:-1:exon

position:1303320:-1
position: 1303320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303430:-1
position: 1303430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1302311-1302415:-1:exon

position:1302311:-1
position: 1302311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302415:-1
position: 1302415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1301241-1301370:-1:exon

position:1301241:-1
position: 1301241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301370:-1
position: 1301370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1300801-1300901:-1:exon

position:1300801:-1
position: 1300801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300901:-1
position: 1300901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1298665-1298759:-1:exon

position:1298665:-1
position: 1298665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298759:-1
position: 1298759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1290490-1290568:-1:exon

position:1290490:-1
position: 1290490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290568:-1
position: 1290568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1273860-1273896:-1:exon

position:1273860:-1
position: 1273860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273896:-1
position: 1273896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1267038-1267103:-1:exon

position:1267038:-1
position: 1267038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267103:-1
position: 1267103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1265609-1265683:-1:exon

position:1265609:-1
position: 1265609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265683:-1
position: 1265683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1257954-1258041:-1:exon

position:1257954:-1
position: 1257954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258041:-1
position: 1258041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1256754-1256812:-1:exon

position:1256754:-1
position: 1256754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256812:-1
position: 1256812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1255669-1255774:-1:exon

position:1255669:-1
position: 1255669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255774:-1
position: 1255774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1238201-1238360:-1:exon

position:1238201:-1
position: 1238201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238360:-1
position: 1238360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1230389-1230527:-1:exon

position:1230389:-1
position: 1230389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230527:-1
position: 1230527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1224914-1225067:-1:exon

position:1224914:-1
position: 1224914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225067:-1
position: 1225067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1203175-1203285:-1:exon

position:1203175:-1
position: 1203175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203285:-1
position: 1203285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1200433-1200524:-1:exon

position:1200433:-1
position: 1200433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200524:-1
position: 1200524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1195315-1196863:-1:exon

position:1196863:-1
position: 1196863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040573147.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1195315..1196863,1200433..1200524,1203175..1203285,1224914..1225067,1230389..1230527,1238201..1238360,1255669..1255774,1256754..1256812,1257954..1258041,1265609..1265683,1267038..1267103,1273860..1273896,1290490..1290568,1298665..1298759,1300801..1300901,1301241..1301370,1302311..1302415,1303320..1303430,1305625..1305726,1307508..1307579,1308055..1308116,1309040..1309135,1309948..1309966))
location: region:1195315-1309966:-1
so has part: feature:1309948-1309966:-1:exon
so has part: feature:1309040-1309135:-1:exon
so has part: feature:1308055-1308116:-1:exon
so has part: feature:1307508-1307579:-1:exon
so has part: feature:1305625-1305726:-1:exon
so has part: feature:1303320-1303430:-1:exon
so has part: feature:1302311-1302415:-1:exon
so has part: feature:1301241-1301370:-1:exon
so has part: feature:1300801-1300901:-1:exon
so has part: feature:1298665-1298759:-1:exon
so has part: feature:1290490-1290568:-1:exon
so has part: feature:1273860-1273896:-1:exon
so has part: feature:1267038-1267103:-1:exon
so has part: feature:1265609-1265683:-1:exon
so has part: feature:1257954-1258041:-1:exon
so has part: feature:1256754-1256812:-1:exon
so has part: feature:1255669-1255774:-1:exon
so has part: feature:1238201-1238360:-1:exon
so has part: feature:1230389-1230527:-1:exon
so has part: feature:1224914-1225067:-1:exon
so has part: feature:1203175-1203285:-1:exon
so has part: feature:1200433-1200524:-1:exon
so has part: feature:1195315-1196863:-1:exon

position:1309966:-1
position: 1309966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1309948-1309966:-1:exon

position:1309948:-1
position: 1309948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1309040-1309135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308055-1308116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307508-1307579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305625-1305726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1303320-1303430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1302311-1302415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1301241-1301370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300801-1300901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298665-1298759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290490-1290568:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273860-1273896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1267038-1267103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265609-1265683:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257954-1258041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1256754-1256812:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1255669-1255774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1238201-1238360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1230389-1230527:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1224914-1225067:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1203175-1203285:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1200433-1200524:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1195315-1196863:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X1
translation: MGLPALEFSECCLDSPQFRERLRSHEAELEKTNKFIKELIKDAKSLVAALKNLSSAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVESLMKKMKENPHEHKNLSPNTMEGYLYVQEKRHFSTAWVKHYCTYERESKRIMMVPFDQKSGGKAGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDNQSEGTAQLDNIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPETPPSNSQLLLSRKKSTDSKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVVSSNANSFLNSNSSPQPNLNSSDLELEVIKPNRPNSLPQNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPISSPLRKARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1196775..1196863,1200433..1200524,1203175..1203285,1224914..1225067,1230389..1230527,1238201..1238360,1255669..1255774,1256754..1256812,1257954..1258041,1265609..1265683,1267038..1267103,1273860..1273896,1290490..1290568,1298665..1298759,1300801..1300901,1301241..1301370,1302311..1302415,1303320..1303430,1305625..1305726,1307508..1307579,1308055..1308116,1309040..1309135,1327074..1327227))
location: region:1196775-1327227:-1
so has part: feature:1327074-1327227:-1:exon
so has part: feature:1309040-1309135:-1:exon
so has part: feature:1308055-1308116:-1:exon
so has part: feature:1307508-1307579:-1:exon
so has part: feature:1305625-1305726:-1:exon
so has part: feature:1303320-1303430:-1:exon
so has part: feature:1302311-1302415:-1:exon
so has part: feature:1301241-1301370:-1:exon
so has part: feature:1300801-1300901:-1:exon
so has part: feature:1298665-1298759:-1:exon
so has part: feature:1290490-1290568:-1:exon
so has part: feature:1273860-1273896:-1:exon
so has part: feature:1267038-1267103:-1:exon
so has part: feature:1265609-1265683:-1:exon
so has part: feature:1257954-1258041:-1:exon
so has part: feature:1256754-1256812:-1:exon
so has part: feature:1255669-1255774:-1:exon
so has part: feature:1238201-1238360:-1:exon
so has part: feature:1230389-1230527:-1:exon
so has part: feature:1224914-1225067:-1:exon
so has part: feature:1203175-1203285:-1:exon
so has part: feature:1200433-1200524:-1:exon
so has part: feature:1196775-1196863:-1:exon

XP_040429080.1
type: Protein
SIO_000068: ncbiprotein

position:1196775:-1
position: 1196775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327227:-1
position: 1327227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327074-1327227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1309040-1309135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308055-1308116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307508-1307579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305625-1305726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1303320-1303430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1302311-1302415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1301241-1301370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300801-1300901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298665-1298759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290490-1290568:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273860-1273896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1267038-1267103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265609-1265683:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257954-1258041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1256754-1256812:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1255669-1255774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1238201-1238360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1230389-1230527:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1224914-1225067:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1203175-1203285:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1200433-1200524:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1196775-1196863:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X2
translation: MRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVESLMKKMKENPHEHKNLSPNTMEGYLYVQEKRHFSTAWVKHYCTYERESKRIMMVPFDQKSGGKAGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDNQSEGTAQLDNIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPETPPSNSQLLLSRKKSTDSKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVVSSNANSFLNSNSSPQPNLNSSDLELEVIKPNRPNSLPQNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPISSPLRKARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1196775..1196863,1200433..1200524,1203175..1203285,1224914..1225067,1230389..1230527,1238201..1238360,1255669..1255774,1256754..1256812,1257954..1258041,1265609..1265683,1267038..1267103,1273860..1273896,1290490..1290568,1298665..1298759,1300801..1300901,1301241..1301370,1302311..1302415,1303320..1303430,1305625..1305726,1307508..1307579,1308055..1308063))
location: region:1196775-1308063:-1
so has part: feature:1308055-1308063:-1:exon
so has part: feature:1307508-1307579:-1:exon
so has part: feature:1305625-1305726:-1:exon
so has part: feature:1303320-1303430:-1:exon
so has part: feature:1302311-1302415:-1:exon
so has part: feature:1301241-1301370:-1:exon
so has part: feature:1300801-1300901:-1:exon
so has part: feature:1298665-1298759:-1:exon
so has part: feature:1290490-1290568:-1:exon
so has part: feature:1273860-1273896:-1:exon
so has part: feature:1267038-1267103:-1:exon
so has part: feature:1265609-1265683:-1:exon
so has part: feature:1257954-1258041:-1:exon
so has part: feature:1256754-1256812:-1:exon
so has part: feature:1255669-1255774:-1:exon
so has part: feature:1238201-1238360:-1:exon
so has part: feature:1230389-1230527:-1:exon
so has part: feature:1224914-1225067:-1:exon
so has part: feature:1203175-1203285:-1:exon
so has part: feature:1200433-1200524:-1:exon
so has part: feature:1196775-1196863:-1:exon

XP_040429081.1
type: Protein
SIO_000068: ncbiprotein

position:1308063:-1
position: 1308063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1308055-1308063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1307508-1307579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305625-1305726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1303320-1303430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1302311-1302415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1301241-1301370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1300801-1300901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298665-1298759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1290490-1290568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1273860-1273896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1267038-1267103:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1265609-1265683:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1257954-1258041:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1256754-1256812:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1255669-1255774:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1238201-1238360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1230389-1230527:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1224914-1225067:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1203175-1203285:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1200433-1200524:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1196775-1196863:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_040573149.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1203294..1207311,1224914..1225067,1230389..1230527,1238201..1238360,1255669..1255774,1256754..1256812,1257954..1258041,1265609..1265683,1267038..1267103,1273860..1273896,1290490..1290568,1298665..1298759,1300801..1300901,1301241..1301370,1302311..1302415,1303320..1303430,1305625..1305726,1307508..1307579,1308055..1308116,1309040..1309135,1327074..1327331))
location: region:1203294-1327331:-1
so has part: feature:1327074-1327331:-1:exon
so has part: feature:1309040-1309135:-1:exon
so has part: feature:1308055-1308116:-1:exon
so has part: feature:1307508-1307579:-1:exon
so has part: feature:1305625-1305726:-1:exon
so has part: feature:1303320-1303430:-1:exon
so has part: feature:1302311-1302415:-1:exon
so has part: feature:1301241-1301370:-1:exon
so has part: feature:1300801-1300901:-1:exon
so has part: feature:1298665-1298759:-1:exon
so has part: feature:1290490-1290568:-1:exon
so has part: feature:1273860-1273896:-1:exon
so has part: feature:1267038-1267103:-1:exon
so has part: feature:1265609-1265683:-1:exon
so has part: feature:1257954-1258041:-1:exon
so has part: feature:1256754-1256812:-1:exon
so has part: feature:1255669-1255774:-1:exon
so has part: feature:1238201-1238360:-1:exon
so has part: feature:1230389-1230527:-1:exon
so has part: feature:1224914-1225067:-1:exon
so has part: feature:1203294-1207311:-1:exon

position:1203294:-1
position: 1203294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327331:-1
position: 1327331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327074-1327331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1309040-1309135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308055-1308116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307508-1307579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305625-1305726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1303320-1303430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1302311-1302415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1301241-1301370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300801-1300901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298665-1298759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290490-1290568:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273860-1273896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1267038-1267103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265609-1265683:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257954-1258041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1256754-1256812:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1255669-1255774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1238201-1238360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1230389-1230527:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1224914-1225067:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1203294-1207311:-1:exon

position:1207311:-1
position: 1207311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X4
translation: MGLPALEFSECCLDSPQFRERLRSHEAELEKTNKFIKELIKDAKSLVAALKNLSSAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVESLMKKMKENPHEHKNLSPNTMEGYLYVQEKRHFSTAWVKHYCTYERESKRIMMVPFDQKSGGKAGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDNQSEGTAQLDNIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPETPPSNSQLLLSRKKSTDSKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVVSSNANSFLNSNSSPQPNLNSSDLELEVIKPNRPNSLESPSQSPQE
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1207281..1207311,1224914..1225067,1230389..1230527,1238201..1238360,1255669..1255774,1256754..1256812,1257954..1258041,1265609..1265683,1267038..1267103,1273860..1273896,1290490..1290568,1298665..1298759,1300801..1300901,1301241..1301370,1302311..1302415,1303320..1303430,1305625..1305726,1307508..1307579,1308055..1308116,1309040..1309135,1327074..1327227))
location: region:1207281-1327227:-1
so has part: feature:1327074-1327227:-1:exon
so has part: feature:1309040-1309135:-1:exon
so has part: feature:1308055-1308116:-1:exon
so has part: feature:1307508-1307579:-1:exon
so has part: feature:1305625-1305726:-1:exon
so has part: feature:1303320-1303430:-1:exon
so has part: feature:1302311-1302415:-1:exon
so has part: feature:1301241-1301370:-1:exon
so has part: feature:1300801-1300901:-1:exon
so has part: feature:1298665-1298759:-1:exon
so has part: feature:1290490-1290568:-1:exon
so has part: feature:1273860-1273896:-1:exon
so has part: feature:1267038-1267103:-1:exon
so has part: feature:1265609-1265683:-1:exon
so has part: feature:1257954-1258041:-1:exon
so has part: feature:1256754-1256812:-1:exon
so has part: feature:1255669-1255774:-1:exon
so has part: feature:1238201-1238360:-1:exon
so has part: feature:1230389-1230527:-1:exon
so has part: feature:1224914-1225067:-1:exon
so has part: feature:1207281-1207311:-1:exon

XP_040429083.1
type: Protein
SIO_000068: ncbiprotein

position:1207281:-1
position: 1207281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327074-1327227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1309040-1309135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308055-1308116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307508-1307579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305625-1305726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1303320-1303430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1302311-1302415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1301241-1301370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300801-1300901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298665-1298759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290490-1290568:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273860-1273896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1267038-1267103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265609-1265683:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257954-1258041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1256754-1256812:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1255669-1255774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1238201-1238360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1230389-1230527:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1224914-1225067:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1207281-1207311:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040573148.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1207348..1209293,1224914..1225067,1230389..1230527,1238201..1238360,1255669..1255774,1256754..1256812,1257954..1258041,1265609..1265683,1267038..1267103,1273860..1273896,1290490..1290568,1298665..1298759,1300801..1300901,1301241..1301370,1302311..1302415,1303320..1303430,1305625..1305726,1307508..1307579,1308055..1308116,1309040..1309135,1327074..1327332))
location: region:1207348-1327332:-1
so has part: feature:1327074-1327332:-1:exon
so has part: feature:1309040-1309135:-1:exon
so has part: feature:1308055-1308116:-1:exon
so has part: feature:1307508-1307579:-1:exon
so has part: feature:1305625-1305726:-1:exon
so has part: feature:1303320-1303430:-1:exon
so has part: feature:1302311-1302415:-1:exon
so has part: feature:1301241-1301370:-1:exon
so has part: feature:1300801-1300901:-1:exon
so has part: feature:1298665-1298759:-1:exon
so has part: feature:1290490-1290568:-1:exon
so has part: feature:1273860-1273896:-1:exon
so has part: feature:1267038-1267103:-1:exon
so has part: feature:1265609-1265683:-1:exon
so has part: feature:1257954-1258041:-1:exon
so has part: feature:1256754-1256812:-1:exon
so has part: feature:1255669-1255774:-1:exon
so has part: feature:1238201-1238360:-1:exon
so has part: feature:1230389-1230527:-1:exon
so has part: feature:1224914-1225067:-1:exon
so has part: feature:1207348-1209293:-1:exon

position:1207348:-1
position: 1207348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327332:-1
position: 1327332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327074-1327332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1309040-1309135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308055-1308116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307508-1307579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305625-1305726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1303320-1303430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1302311-1302415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1301241-1301370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300801-1300901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298665-1298759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290490-1290568:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273860-1273896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1267038-1267103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265609-1265683:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257954-1258041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1256754-1256812:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1255669-1255774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1238201-1238360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1230389-1230527:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1224914-1225067:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1207348-1209293:-1:exon

position:1209293:-1
position: 1209293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X3
translation: MGLPALEFSECCLDSPQFRERLRSHEAELEKTNKFIKELIKDAKSLVAALKNLSSAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVESLMKKMKENPHEHKNLSPNTMEGYLYVQEKRHFSTAWVKHYCTYERESKRIMMVPFDQKSGGKAGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDNQSEGTAQLDNIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPETPPSNSQLLLSRKKSTDSKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVVSSNANSFLNSNSSPQPNLNSSDLELEVIKPNRPNSLTVLPPPGPRCCG
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(1209254..1209293,1224914..1225067,1230389..1230527,1238201..1238360,1255669..1255774,1256754..1256812,1257954..1258041,1265609..1265683,1267038..1267103,1273860..1273896,1290490..1290568,1298665..1298759,1300801..1300901,1301241..1301370,1302311..1302415,1303320..1303430,1305625..1305726,1307508..1307579,1308055..1308116,1309040..1309135,1327074..1327227))
location: region:1209254-1327227:-1
so has part: feature:1327074-1327227:-1:exon
so has part: feature:1309040-1309135:-1:exon
so has part: feature:1308055-1308116:-1:exon
so has part: feature:1307508-1307579:-1:exon
so has part: feature:1305625-1305726:-1:exon
so has part: feature:1303320-1303430:-1:exon
so has part: feature:1302311-1302415:-1:exon
so has part: feature:1301241-1301370:-1:exon
so has part: feature:1300801-1300901:-1:exon
so has part: feature:1298665-1298759:-1:exon
so has part: feature:1290490-1290568:-1:exon
so has part: feature:1273860-1273896:-1:exon
so has part: feature:1267038-1267103:-1:exon
so has part: feature:1265609-1265683:-1:exon
so has part: feature:1257954-1258041:-1:exon
so has part: feature:1256754-1256812:-1:exon
so has part: feature:1255669-1255774:-1:exon
so has part: feature:1238201-1238360:-1:exon
so has part: feature:1230389-1230527:-1:exon
so has part: feature:1224914-1225067:-1:exon
so has part: feature:1209254-1209293:-1:exon

XP_040429082.1
type: Protein
SIO_000068: ncbiprotein

position:1209254:-1
position: 1209254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327074-1327227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1309040-1309135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308055-1308116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1307508-1307579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305625-1305726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1303320-1303430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1302311-1302415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1301241-1301370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300801-1300901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298665-1298759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290490-1290568:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1273860-1273896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1267038-1267103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265609-1265683:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257954-1258041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1256754-1256812:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1255669-1255774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1238201-1238360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1230389-1230527:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1224914-1225067:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1209254-1209293:-1:exon

FGF1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1339203..1361401
location: region:1339203-1361401:1
so has part: feature:1339203-1361401:1:exon
subclass of: SO_0000010

121077720
type: Gene
SIO_000068: ncbigene

position:1339203:1
position: 1339203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361401:1
position: 1361401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339203-1361401:1:exon

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FGF1
product: fibroblast growth factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040573154.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1339203..1339407,1355350..1355550,1359223..1359326,1360194..1361401)
location: region:1339203-1361401:1
so has part: feature:1339203-1339407:1:exon
so has part: feature:1355350-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360194-1361401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339203-1339407:1:exon

position:1339407:1
position: 1339407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355350-1355550:1:exon

position:1355350:1
position: 1355350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355550:1
position: 1355550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1359223-1359326:1:exon

position:1359223:1
position: 1359223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359326:1
position: 1359326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1360194-1361401:1:exon

position:1360194:1
position: 1360194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FGF1
product: fibroblast growth factor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573159.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1341853..1341998,1355350..1355550,1357637..1357956)
location: region:1341853-1357956:1
so has part: feature:1341853-1341998:1:exon
so has part: feature:1355350-1355550:1:exon
so has part: feature:1357637-1357956:1:exon

position:1341853:1
position: 1341853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357956:1
position: 1357956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341853-1341998:1:exon

position:1341998:1
position: 1341998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355350-1355550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357637-1357956:1:exon

position:1357637:1
position: 1357637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FGF1
product: fibroblast growth factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573153.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1341855..1341998,1355350..1355550,1359223..1359326,1360194..1361401)
location: region:1341855-1361401:1
so has part: feature:1341855-1341998:1:exon
so has part: feature:1355350-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360194-1361401:1:exon

position:1341855:1
position: 1341855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341855-1341998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355350-1355550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1360194-1361401:1:exon

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FGF1
product: fibroblast growth factor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573158.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1341855..1341998,1355350..1355550,1359223..1359326,1360197..1361401)
location: region:1341855-1361401:1
so has part: feature:1341855-1341998:1:exon
so has part: feature:1355350-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360197-1361401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1341855-1341998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355350-1355550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1360197-1361401:1:exon

position:1360197:1
position: 1360197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FGF1
product: fibroblast growth factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573157.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1348100..1352343,1355350..1355550,1359223..1359326,1360194..1361401)
location: region:1348100-1361401:1
so has part: feature:1348100-1352343:1:exon
so has part: feature:1355350-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360194-1361401:1:exon

position:1348100:1
position: 1348100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348100-1352343:1:exon

position:1352343:1
position: 1352343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355350-1355550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1360194-1361401:1:exon

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: FGF1
product: fibroblast growth factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_040573155.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1352366..1354150,1355350..1355550,1359223..1359326,1360194..1361401)
location: region:1352366-1361401:1
so has part: feature:1352366-1354150:1:exon
so has part: feature:1355350-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360194-1361401:1:exon

position:1352366:1
position: 1352366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352366-1354150:1:exon

position:1354150:1
position: 1354150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355350-1355550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1360194-1361401:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFNLPLGNYKKPKLLYCSNGGHFLRILPDGKVDGTRDRSDQHIQLQLSAESVGEVYIKSTKSGQYLAMDTNGLLYGSQLLGEECLFLERIEENHYNTYVSKKHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1355382..1355550,1359223..1359326,1360194..1360388)
location: region:1355382-1360388:1
so has part: feature:1355382-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360194-1360388:1:exon

XP_040429087.1
type: Protein
SIO_000068: ncbiprotein

position:1355382:1
position: 1355382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360388:1
position: 1360388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355382-1355550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360194-1360388:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFNLPLGNYKKPKLLYCSNGGHFLRILPDGKVDGTRDRSDQHIQLQLSAESVGEVYIKSTKSGQYLAMDTNGLLYGSQLLGEECLFLERIEENHYNTYVSKKHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1355382..1355550,1359223..1359326,1360194..1360388)
location: region:1355382-1360388:1
so has part: feature:1355382-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360194-1360388:1:exon

XP_040429088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1355382-1355550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360194-1360388:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFNLPLGNYKKPKLLYCSNGGHFLRILPDGKVDGTRDRSDQHIQLQLSAESVGEVYIKSTKSGQYLAMDTNGLLYGSQLLGEECLFLERIEENHYNTYVSKKHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1355382..1355550,1359223..1359326,1360194..1360388)
location: region:1355382-1360388:1
so has part: feature:1355382-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360194-1360388:1:exon

XP_040429089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1355382-1355550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360194-1360388:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFNLPLGNYKKPKLLYCSNGGHFLRILPDGKVDGTRDRSDQHIQLQLSAESVGEVYIKSTKSGQYLAMDTNGLLYGSQLLGEECLFLERIEENHYNTYVSKKHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1355382..1355550,1359223..1359326,1360194..1360388)
location: region:1355382-1360388:1
so has part: feature:1355382-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360194-1360388:1:exon

XP_040429091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1355382-1355550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360194-1360388:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X2
translation: MAEGEITTFTALTEKFNLPLGNYKKPKLLYCSNGGHFLRILPDGKVDGTRDRSDQHIQLQLSAESVGEVYIKSTKSGQYLAMDTNGLLYGSLLGEECLFLERIEENHYNTYVSKKHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1355382..1355550,1359223..1359326,1360197..1360388)
location: region:1355382-1360388:1
so has part: feature:1355382-1355550:1:exon
so has part: feature:1359223-1359326:1:exon
so has part: feature:1360197-1360388:1:exon

XP_040429092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1355382-1355550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359223-1359326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360197-1360388:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X3
translation: MAEGEITTFTALTEKFNLPLGNYKKPKLLYCSNGGHFLRILPDGKVDGTRDRSDQHTTSRSKLSVQSCEGTCKN
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1355382..1355550,1357637..1357692)
location: region:1355382-1357692:1
so has part: feature:1355382-1355550:1:exon
so has part: feature:1357637-1357692:1:exon

XP_040429093.1
type: Protein
SIO_000068: ncbiprotein

position:1357692:1
position: 1357692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355382-1355550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1357637-1357692:1:exon

LOC121077718
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1360917..1365247)
location: region:1360917-1365247:-1
so has part: feature:1360917-1365247:-1:exon
subclass of: SO_0000010

121077718
type: Gene
SIO_000068: ncbigene

position:1360917:-1
position: 1360917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365247:-1
position: 1365247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360917-1365247:-1:exon

LOC121077718
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121077718
product: uncharacterized LOC121077718, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040573151.1
SIO_010081: LOC121077718
subclass of: SO_0000673
so part of: LOC121077718
location: complement(join(1360917..1362139,1362299..1362431,1363172..1363311,1364627..1365247))
location: region:1360917-1365247:-1
so has part: feature:1364627-1365247:-1:exon
so has part: feature:1363172-1363311:-1:exon
so has part: feature:1362299-1362431:-1:exon
so has part: feature:1360917-1362139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1364627-1365247:-1:exon

position:1364627:-1
position: 1364627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1363172-1363311:-1:exon

position:1363172:-1
position: 1363172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363311:-1
position: 1363311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1362299-1362431:-1:exon

position:1362299:-1
position: 1362299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362431:-1
position: 1362431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1360917-1362139:-1:exon

position:1362139:-1
position: 1362139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121077718
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121077718
product: uncharacterized LOC121077718, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_040573152.1
SIO_010081: LOC121077718
subclass of: SO_0000673
so part of: LOC121077718
location: complement(join(1360917..1362139,1363172..1363311,1364627..1365244))
location: region:1360917-1365244:-1
so has part: feature:1364627-1365244:-1:exon
so has part: feature:1363172-1363311:-1:exon
so has part: feature:1360917-1362139:-1:exon

position:1365244:-1
position: 1365244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364627-1365244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363172-1363311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360917-1362139:-1:exon

LOC121077718
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121077718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121077718 isoform X2
translation: MPFLVQDKHLTGTSSRVLNLGRGLLSQTKAGSAQDLELCGLVLCVADGVPAELAGCRAFSGFADLAGQPAAPRSPAEPCVDVSRSKREHGQRGLWDPPALHLPCAASSRAAGRWKKPQRGIIVVLDRRAGIVSESCKVVPVVLQALSVQPKTLQPTLPVGSVWRLRYLTRKSRNCLESQALTAGKEALEKAFRSHEAPWLCVRPQPSSCPG
SIO_010081: LOC121077718
subclass of: SO_0000673
so part of: LOC121077718
location: complement(join(1362032..1362139,1363172..1363311,1364627..1365014))
location: region:1362032-1365014:-1
so has part: feature:1364627-1365014:-1:exon
so has part: feature:1363172-1363311:-1:exon
so has part: feature:1362032-1362139:-1:exon

XP_040429086.1
type: Protein
SIO_000068: ncbiprotein

position:1362032:-1
position: 1362032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365014:-1
position: 1365014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364627-1365014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363172-1363311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362032-1362139:-1:exon

LOC121077718
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121077718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121077718 isoform X1
translation: MPFLVQDKHLTGTSSRVLNLGRGLLSQTKAGSAQDLELCGLVLCVADGVPAELAGCRAFSGFADLAGQPAAPRSPAEPCVDVSRSKREHGQRGLWDPPALHLPCAASSRAAGRWKKPQRGIIVVLDRRAGIVSESCKVVPVVLQALSVQPKTLQPTLPVGSVWRLRYLTRKSRNCLLCEYAADLTWWCSHCKELERAAELLRCSCQVHTSTVSKDFYKNKGKSGPDCRKGSTGKSI
SIO_010081: LOC121077718
subclass of: SO_0000673
so part of: LOC121077718
location: complement(join(1362090..1362139,1362299..1362431,1363172..1363311,1364627..1365014))
location: region:1362090-1365014:-1
so has part: feature:1364627-1365014:-1:exon
so has part: feature:1363172-1363311:-1:exon
so has part: feature:1362299-1362431:-1:exon
so has part: feature:1362090-1362139:-1:exon

XP_040429085.1
type: Protein
SIO_000068: ncbiprotein

position:1362090:-1
position: 1362090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1364627-1365014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363172-1363311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362299-1362431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1362090-1362139:-1:exon

SPRY4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SPRY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1410940..1425523
location: region:1410940-1425523:1
so has part: feature:1410940-1425523:1:exon
subclass of: SO_0000010

121077717
type: Gene
SIO_000068: ncbigene

position:1410940:1
position: 1410940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425523:1
position: 1425523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1410940-1425523:1:exon

SPRY4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SPRY4
product: sprouty RTK signaling antagonist 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040573150.1
SIO_010081: SPRY4
subclass of: SO_0000673
so part of: SPRY4
location: join(1410940..1411087,1421352..1425523)
location: region:1410940-1425523:1
so has part: feature:1410940-1411087:1:exon
so has part: feature:1421352-1425523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1410940-1411087:1:exon

position:1411087:1
position: 1411087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1421352-1425523:1:exon

position:1421352:1
position: 1421352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRY4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: SPRY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sprouty homolog 4
translation: MEPRIPHNITVVPNSVMVQPLLDSRIPYGRLQHPLTILPIDQMKTTHIENDYTDNPTASQLAAQKRPRGPHELVLTNPHLQRCEQDVTHPWISFSGRPSSISSSSSTSSDQRLLDHMAPVPVAEQSSPRAVRIQPKAINCKPLDLKGPVSQELDKHFLLCEACGKCKCKECALPRTLPSCWVCNQECLCSAQNLVNYSTCMCLVKGVFYHCTNEDDEGTCADHPCSCSHSNCCARWSFMSALSLVLPCLLCYLPATGCVKLSQRCYDQVSRPGCRCKNTNSVICKALPESKANRPEKPF
SIO_010081: SPRY4
subclass of: SO_0000673
so part of: SPRY4
location: 1421398..1422297
location: region:1421398-1422297:1
so has part: feature:1421398-1422297:1:exon

XP_040429084.1
type: Protein
SIO_000068: ncbiprotein

position:1421398:1
position: 1421398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422297:1
position: 1422297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421398-1422297:1:exon

LOC121077721
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1430786..1435688)
location: region:1430786-1435688:-1
so has part: feature:1430786-1435688:-1:exon
subclass of: SO_0000011

121077721
type: Gene
SIO_000068: ncbigene

position:1430786:-1
position: 1430786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435688:-1
position: 1435688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430786-1435688:-1:exon

LOC121077721
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077721
product: uncharacterized LOC121077721, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005824270.1
SIO_010081: LOC121077721
subclass of: SO_0000673
so part of: LOC121077721
location: complement(join(1430786..1432981,1434292..1434479,1435452..1435688))
location: region:1430786-1435688:-1
so has part: feature:1435452-1435688:-1:exon
so has part: feature:1434292-1434479:-1:exon
so has part: feature:1430786-1432981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1435452-1435688:-1:exon

position:1435452:-1
position: 1435452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1434292-1434479:-1:exon

position:1434292:-1
position: 1434292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434479:-1
position: 1434479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1430786-1432981:-1:exon

position:1432981:-1
position: 1432981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121077721
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077721
product: uncharacterized LOC121077721, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005824269.1
SIO_010081: LOC121077721
subclass of: SO_0000673
so part of: LOC121077721
location: complement(join(1430786..1432981,1434292..1434773))
location: region:1430786-1434773:-1
so has part: feature:1434292-1434773:-1:exon
so has part: feature:1430786-1432981:-1:exon

position:1434773:-1
position: 1434773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434292-1434773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430786-1432981:-1:exon

NDFIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1444920..1461221)
location: region:1444920-1461221:-1
so has part: feature:1444920-1461221:-1:exon
subclass of: SO_0000010

121077726
type: Gene
SIO_000068: ncbigene

position:1444920:-1
position: 1444920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1461221:-1
position: 1461221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444920-1461221:-1:exon

NDFIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NDFIP1
product: Nedd4 family interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 152 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573166.1
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(1444920..1445065,1447414..1447519,1448117..1448183,1450066..1450190,1450379..1450466,1451423..1451553,1452744..1452831,1461064..1461221))
location: region:1444920-1461221:-1
so has part: feature:1461064-1461221:-1:exon
so has part: feature:1452744-1452831:-1:exon
so has part: feature:1451423-1451553:-1:exon
so has part: feature:1450379-1450466:-1:exon
so has part: feature:1450066-1450190:-1:exon
so has part: feature:1448117-1448183:-1:exon
so has part: feature:1447414-1447519:-1:exon
so has part: feature:1444920-1445065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1461064-1461221:-1:exon

position:1461064:-1
position: 1461064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1452744-1452831:-1:exon

position:1452744:-1
position: 1452744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452831:-1
position: 1452831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1451423-1451553:-1:exon

position:1451423:-1
position: 1451423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451553:-1
position: 1451553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1450379-1450466:-1:exon

position:1450379:-1
position: 1450379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450466:-1
position: 1450466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1450066-1450190:-1:exon

position:1450066:-1
position: 1450066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450190:-1
position: 1450190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1448117-1448183:-1:exon

position:1448117:-1
position: 1448117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448183:-1
position: 1448183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1447414-1447519:-1:exon

position:1447414:-1
position: 1447414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447519:-1
position: 1447519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1444920-1445065:-1:exon

position:1445065:-1
position: 1445065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDFIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: NDFIP1
product: Nedd4 family interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_040573167.1
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(1444920..1445558,1447414..1447519,1448117..1448183,1450066..1450190,1450379..1450466,1451423..1451553,1452744..1452831,1461064..1461218))
location: region:1444920-1461218:-1
so has part: feature:1461064-1461218:-1:exon
so has part: feature:1452744-1452831:-1:exon
so has part: feature:1451423-1451553:-1:exon
so has part: feature:1450379-1450466:-1:exon
so has part: feature:1450066-1450190:-1:exon
so has part: feature:1448117-1448183:-1:exon
so has part: feature:1447414-1447519:-1:exon
so has part: feature:1444920-1445558:-1:exon

position:1461218:-1
position: 1461218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1461064-1461218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452744-1452831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1451423-1451553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1450379-1450466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1450066-1450190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448117-1448183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447414-1447519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1444920-1445558:-1:exon

position:1445558:-1
position: 1445558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDFIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4 family-interacting protein 1
translation: MAAAEPGSGRYQQLQNEEEPGETAPVVNDAPPPYSSISAENTAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGREDDFVTRDDFDDTDQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPDTFSTLPRTRVLFIY
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(1447416..1447519,1448117..1448183,1450066..1450190,1450379..1450466,1451423..1451553,1452744..1452831,1461064..1461102))
location: region:1447416-1461102:-1
so has part: feature:1461064-1461102:-1:exon
so has part: feature:1452744-1452831:-1:exon
so has part: feature:1451423-1451553:-1:exon
so has part: feature:1450379-1450466:-1:exon
so has part: feature:1450066-1450190:-1:exon
so has part: feature:1448117-1448183:-1:exon
so has part: feature:1447416-1447519:-1:exon

XP_040429100.1
type: Protein
SIO_000068: ncbiprotein

position:1447416:-1
position: 1447416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1461102:-1
position: 1461102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1461064-1461102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452744-1452831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1451423-1451553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1450379-1450466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1450066-1450190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448117-1448183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447416-1447519:-1:exon

NDFIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4 family-interacting protein 1
translation: MAAAEPGSGRYQQLQNEEEPGETAPVVNDAPPPYSSISAENTAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGREDDFVTRDDFDDTDQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPDTFSTLPRTRVLFIY
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(1447416..1447519,1448117..1448183,1450066..1450190,1450379..1450466,1451423..1451553,1452744..1452831,1461064..1461102))
location: region:1447416-1461102:-1
so has part: feature:1461064-1461102:-1:exon
so has part: feature:1452744-1452831:-1:exon
so has part: feature:1451423-1451553:-1:exon
so has part: feature:1450379-1450466:-1:exon
so has part: feature:1450066-1450190:-1:exon
so has part: feature:1448117-1448183:-1:exon
so has part: feature:1447416-1447519:-1:exon

XP_040429101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1461064-1461102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452744-1452831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1451423-1451553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1450379-1450466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1450066-1450190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1448117-1448183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447416-1447519:-1:exon

GNPDA1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1467923..1472016
location: region:1467923-1472016:1
so has part: feature:1467923-1472016:1:exon
subclass of: SO_0000010

121077725
type: Gene
SIO_000068: ncbigene

position:1467923:1
position: 1467923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472016:1
position: 1472016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467923-1472016:1:exon

GNPDA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GNPDA1
product: glucosamine-6-phosphate deaminase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573164.1
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(1467923..1468116,1468204..1468305,1469460..1469642,1470259..1470482,1471115..1471289,1471568..1472016)
location: region:1467923-1472016:1
so has part: feature:1467923-1468116:1:exon
so has part: feature:1468204-1468305:1:exon
so has part: feature:1469460-1469642:1:exon
so has part: feature:1470259-1470482:1:exon
so has part: feature:1471115-1471289:1:exon
so has part: feature:1471568-1472016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1467923-1468116:1:exon

position:1468116:1
position: 1468116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1468204-1468305:1:exon

position:1468204:1
position: 1468204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468305:1
position: 1468305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1469460-1469642:1:exon

position:1469460:1
position: 1469460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469642:1
position: 1469642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1470259-1470482:1:exon

position:1470259:1
position: 1470259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470482:1
position: 1470482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1471115-1471289:1:exon

position:1471115:1
position: 1471115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471289:1
position: 1471289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1471568-1472016:1:exon

position:1471568:1
position: 1471568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNPDA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GNPDA1
product: glucosamine-6-phosphate deaminase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 105 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573165.1
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(1467926..1468116,1468204..1468305,1469460..1469642,1470259..1470443,1471115..1471289,1471568..1472016)
location: region:1467926-1472016:1
so has part: feature:1467926-1468116:1:exon
so has part: feature:1468204-1468305:1:exon
so has part: feature:1469460-1469642:1:exon
so has part: feature:1470259-1470443:1:exon
so has part: feature:1471115-1471289:1:exon
so has part: feature:1471568-1472016:1:exon

position:1467926:1
position: 1467926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467926-1468116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1468204-1468305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469460-1469642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470259-1470443:1:exon

position:1470443:1
position: 1470443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1471115-1471289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471568-1472016:1:exon

GNPDA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1 isoform X1
translation: MKLIIQETYAQASEWAAKYIRNRIVHFAPGPGRFFTLGLPTGSTPLGCYQKLVEYHKNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDILAENVHILDGNAADLQAECDAFEDKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLSKVPTMALTVGVGTVMDAREVRKEAVTSDNSSRVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPKTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVEPLYSMKETEAERSQSKKPYSD
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(1467993..1468116,1468204..1468305,1469460..1469642,1470259..1470482,1471115..1471289,1471568..1471665)
location: region:1467993-1471665:1
so has part: feature:1467993-1468116:1:exon
so has part: feature:1468204-1468305:1:exon
so has part: feature:1469460-1469642:1:exon
so has part: feature:1470259-1470482:1:exon
so has part: feature:1471115-1471289:1:exon
so has part: feature:1471568-1471665:1:exon

XP_040429098.1
type: Protein
SIO_000068: ncbiprotein

position:1467993:1
position: 1467993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471665:1
position: 1471665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467993-1468116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1468204-1468305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469460-1469642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470259-1470482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471115-1471289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471568-1471665:1:exon

GNPDA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1 isoform X2
translation: MKLIIQETYAQASEWAAKYIRNRIVHFAPGPGRFFTLGLPTGSTPLGCYQKLVEYHKNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDILAENVHILDGNAADLQAECDAFEDKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPKTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVEPLYSMKETEAERSQSKKPYSD
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(1467993..1468116,1468204..1468305,1469460..1469642,1470259..1470443,1471115..1471289,1471568..1471665)
location: region:1467993-1471665:1
so has part: feature:1467993-1468116:1:exon
so has part: feature:1468204-1468305:1:exon
so has part: feature:1469460-1469642:1:exon
so has part: feature:1470259-1470443:1:exon
so has part: feature:1471115-1471289:1:exon
so has part: feature:1471568-1471665:1:exon

XP_040429099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1467993-1468116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1468204-1468305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469460-1469642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470259-1470443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471115-1471289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471568-1471665:1:exon

RNF14
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1473656..1481598)
location: region:1473656-1481598:-1
so has part: feature:1473656-1481598:-1:exon
subclass of: SO_0000010

121077723
type: Gene
SIO_000068: ncbigene

position:1473656:-1
position: 1473656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481598:-1
position: 1481598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1473656-1481598:-1:exon

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RNF14
product: ring finger protein 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573161.1
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1473656..1475182,1476369..1476499,1477084..1477256,1477871..1478099,1478530..1479057,1479404..1479555,1480061..1480223,1480733..1480930,1481484..1481598))
location: region:1473656-1481598:-1
so has part: feature:1481484-1481598:-1:exon
so has part: feature:1480733-1480930:-1:exon
so has part: feature:1480061-1480223:-1:exon
so has part: feature:1479404-1479555:-1:exon
so has part: feature:1478530-1479057:-1:exon
so has part: feature:1477871-1478099:-1:exon
so has part: feature:1477084-1477256:-1:exon
so has part: feature:1476369-1476499:-1:exon
so has part: feature:1473656-1475182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1481484-1481598:-1:exon

position:1481484:-1
position: 1481484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1480733-1480930:-1:exon

position:1480733:-1
position: 1480733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480930:-1
position: 1480930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1480061-1480223:-1:exon

position:1480061:-1
position: 1480061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480223:-1
position: 1480223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1479404-1479555:-1:exon

position:1479404:-1
position: 1479404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479555:-1
position: 1479555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1478530-1479057:-1:exon

position:1478530:-1
position: 1478530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479057:-1
position: 1479057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1477871-1478099:-1:exon

position:1477871:-1
position: 1477871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478099:-1
position: 1478099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1477084-1477256:-1:exon

position:1477084:-1
position: 1477084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477256:-1
position: 1477256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1476369-1476499:-1:exon

position:1476369:-1
position: 1476369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476499:-1
position: 1476499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1473656-1475182:-1:exon

position:1475182:-1
position: 1475182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RNF14
product: ring finger protein 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_040573162.1
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1473656..1475182,1476369..1476499,1477084..1477256,1477871..1478099,1478530..1479057,1479404..1479555,1480061..1480254,1480733..1480930,1481484..1481598))
location: region:1473656-1481598:-1
so has part: feature:1481484-1481598:-1:exon
so has part: feature:1480733-1480930:-1:exon
so has part: feature:1480061-1480254:-1:exon
so has part: feature:1479404-1479555:-1:exon
so has part: feature:1478530-1479057:-1:exon
so has part: feature:1477871-1478099:-1:exon
so has part: feature:1477084-1477256:-1:exon
so has part: feature:1476369-1476499:-1:exon
so has part: feature:1473656-1475182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1481484-1481598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1480733-1480930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1480061-1480254:-1:exon

position:1480254:-1
position: 1480254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1479404-1479555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1478530-1479057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1477871-1478099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1477084-1477256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1476369-1476499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473656-1475182:-1:exon

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: RNF14
product: ring finger protein 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573163.1
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1473656..1475182,1476369..1476499,1477084..1477256,1477871..1478099,1478530..1479057,1479404..1479555,1480068..1480206))
location: region:1473656-1480206:-1
so has part: feature:1480068-1480206:-1:exon
so has part: feature:1479404-1479555:-1:exon
so has part: feature:1478530-1479057:-1:exon
so has part: feature:1477871-1478099:-1:exon
so has part: feature:1477084-1477256:-1:exon
so has part: feature:1476369-1476499:-1:exon
so has part: feature:1473656-1475182:-1:exon

position:1480206:-1
position: 1480206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480068-1480206:-1:exon

position:1480068:-1
position: 1480068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1479404-1479555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1478530-1479057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1477871-1478099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1477084-1477256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1476369-1476499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1473656-1475182:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSSEDKEAQEDELLALASIYDEDEFKRAESAQGGETRICLELPQNFKIFVSGNSADSLQKNRFEYTVCFLPPLVLNFELPPDYPSTSPPAFTLSGKWLSQAQLSALCKHLDNVWEENRGCVVLFAWMQFLKEETLSYLNISSPYELKMCHQGSAQSRTPLVPLDAEKDCGGAAGSAAADEDTIDERAVQDVESLSSLIREILDFDQAQRRKCFNSKMYLCNICFCEKLGSECMYFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEQLFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSRCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADEATKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWLCMGSLSRVNPYRHFNDPSSPCFNRLFQAMHIDGEFWEGEDED
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1475125..1475182,1476369..1476499,1477084..1477256,1477871..1478099,1478530..1479057,1479404..1479555,1480061..1480214))
location: region:1475125-1480214:-1
so has part: feature:1480061-1480214:-1:exon
so has part: feature:1479404-1479555:-1:exon
so has part: feature:1478530-1479057:-1:exon
so has part: feature:1477871-1478099:-1:exon
so has part: feature:1477084-1477256:-1:exon
so has part: feature:1476369-1476499:-1:exon
so has part: feature:1475125-1475182:-1:exon

XP_040429095.1
type: Protein
SIO_000068: ncbiprotein

position:1475125:-1
position: 1475125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480214:-1
position: 1480214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480061-1480214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1479404-1479555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1478530-1479057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1477871-1478099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1477084-1477256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1476369-1476499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1475125-1475182:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSSEDKEAQEDELLALASIYDEDEFKRAESAQGGETRICLELPQNFKIFVSGNSADSLQKNRFEYTVCFLPPLVLNFELPPDYPSTSPPAFTLSGKWLSQAQLSALCKHLDNVWEENRGCVVLFAWMQFLKEETLSYLNISSPYELKMCHQGSAQSRTPLVPLDAEKDCGGAAGSAAADEDTIDERAVQDVESLSSLIREILDFDQAQRRKCFNSKMYLCNICFCEKLGSECMYFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEQLFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSRCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADEATKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWLCMGSLSRVNPYRHFNDPSSPCFNRLFQAMHIDGEFWEGEDED
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1475125..1475182,1476369..1476499,1477084..1477256,1477871..1478099,1478530..1479057,1479404..1479555,1480061..1480214))
location: region:1475125-1480214:-1
so has part: feature:1480061-1480214:-1:exon
so has part: feature:1479404-1479555:-1:exon
so has part: feature:1478530-1479057:-1:exon
so has part: feature:1477871-1478099:-1:exon
so has part: feature:1477084-1477256:-1:exon
so has part: feature:1476369-1476499:-1:exon
so has part: feature:1475125-1475182:-1:exon

XP_040429096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1480061-1480214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1479404-1479555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1478530-1479057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1477871-1478099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1477084-1477256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1476369-1476499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1475125-1475182:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X2
translation: MQFLKEETLSYLNISSPYELKMCHQGSAQSRTPLVPLDAEKDCGGAAGSAAADEDTIDERAVQDVESLSSLIREILDFDQAQRRKCFNSKMYLCNICFCEKLGSECMYFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEQLFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSRCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADEATKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWLCMGSLSRVNPYRHFNDPSSPCFNRLFQAMHIDGEFWEGEDED
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1475125..1475182,1476369..1476499,1477084..1477256,1477871..1478099,1478530..1478985))
location: region:1475125-1478985:-1
so has part: feature:1478530-1478985:-1:exon
so has part: feature:1477871-1478099:-1:exon
so has part: feature:1477084-1477256:-1:exon
so has part: feature:1476369-1476499:-1:exon
so has part: feature:1475125-1475182:-1:exon

XP_040429097.1
type: Protein
SIO_000068: ncbiprotein

position:1478985:-1
position: 1478985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478530-1478985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1477871-1478099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477084-1477256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1476369-1476499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1475125-1475182:-1:exon

HSPA4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: HSPA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1481873..1499184)
location: region:1481873-1499184:-1
so has part: feature:1481873-1499184:-1:exon
subclass of: SO_0000010

121077722
type: Gene
SIO_000068: ncbigene

position:1481873:-1
position: 1481873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499184:-1
position: 1499184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481873-1499184:-1:exon

HSPA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: HSPA4
product: heat shock protein family A (Hsp70) member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 554 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573160.1
SIO_010081: HSPA4
subclass of: SO_0000673
so part of: HSPA4
location: complement(join(1481873..1483140,1483387..1483548,1483930..1484049,1484151..1484258,1485222..1485347,1485847..1485999,1486511..1486600,1486911..1487092,1487557..1487690,1488013..1488119,1489097..1489248,1489545..1489621,1490014..1490258,1491988..1492121,1492500..1492599,1493054..1493176,1493796..1493936,1495552..1495609,1498889..1499184))
location: region:1481873-1499184:-1
so has part: feature:1498889-1499184:-1:exon
so has part: feature:1495552-1495609:-1:exon
so has part: feature:1493796-1493936:-1:exon
so has part: feature:1493054-1493176:-1:exon
so has part: feature:1492500-1492599:-1:exon
so has part: feature:1491988-1492121:-1:exon
so has part: feature:1490014-1490258:-1:exon
so has part: feature:1489545-1489621:-1:exon
so has part: feature:1489097-1489248:-1:exon
so has part: feature:1488013-1488119:-1:exon
so has part: feature:1487557-1487690:-1:exon
so has part: feature:1486911-1487092:-1:exon
so has part: feature:1486511-1486600:-1:exon
so has part: feature:1485847-1485999:-1:exon
so has part: feature:1485222-1485347:-1:exon
so has part: feature:1484151-1484258:-1:exon
so has part: feature:1483930-1484049:-1:exon
so has part: feature:1483387-1483548:-1:exon
so has part: feature:1481873-1483140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1498889-1499184:-1:exon

position:1498889:-1
position: 1498889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1495552-1495609:-1:exon

position:1495552:-1
position: 1495552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495609:-1
position: 1495609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1493796-1493936:-1:exon

position:1493796:-1
position: 1493796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493936:-1
position: 1493936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1493054-1493176:-1:exon

position:1493054:-1
position: 1493054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493176:-1
position: 1493176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1492500-1492599:-1:exon

position:1492500:-1
position: 1492500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492599:-1
position: 1492599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1491988-1492121:-1:exon

position:1491988:-1
position: 1491988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492121:-1
position: 1492121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1490014-1490258:-1:exon

position:1490014:-1
position: 1490014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490258:-1
position: 1490258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1489545-1489621:-1:exon

position:1489545:-1
position: 1489545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489621:-1
position: 1489621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1489097-1489248:-1:exon

position:1489097:-1
position: 1489097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489248:-1
position: 1489248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1488013-1488119:-1:exon

position:1488013:-1
position: 1488013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1488119:-1
position: 1488119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1487557-1487690:-1:exon

position:1487557:-1
position: 1487557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487690:-1
position: 1487690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1486911-1487092:-1:exon

position:1486911:-1
position: 1486911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487092:-1
position: 1487092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1486511-1486600:-1:exon

position:1486511:-1
position: 1486511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486600:-1
position: 1486600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1485847-1485999:-1:exon

position:1485847:-1
position: 1485847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485999:-1
position: 1485999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1485222-1485347:-1:exon

position:1485222:-1
position: 1485222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485347:-1
position: 1485347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1484151-1484258:-1:exon

position:1484151:-1
position: 1484151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1484258:-1
position: 1484258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1483930-1484049:-1:exon

position:1483930:-1
position: 1483930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1484049:-1
position: 1484049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1483387-1483548:-1:exon

position:1483387:-1
position: 1483387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483548:-1
position: 1483548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1481873-1483140:-1:exon

position:1483140:-1
position: 1483140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: HSPA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 4
translation: MSVVGIDLGFQSCYVAVARAGGIETVANEYSDRSTPSCIAFGPKNRSIGAAAKSQVISNAKNTVQSFKRFHGRAFSDPFVQAEKTRLAYELVQLPTGSTGIKVMYMEEERNFTIEQVTGMLLTKLKETAENALKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRIINETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNKGKLKVLATAFDTTLGGRKFDEMLVEYFCEEFGKKYKLDIKSKIRALLRLYQECEKLKKLMSANASDLPMNIECFMNDIDVSGTMNRSKFLEMCDGLLARVEAPLRSVLEQAKLKKEDIYAVEIVGGTTRIPAVKEKISKFFGKEVSTTLNADEAVARGCALQCAILSPAFKVREFSITDLIPYPISLRWNSPAEEGLSDCEVFPKNHPAPFSKVLTFYRKEPFTLEAYYSSPKELPYPDPAIAHFLVQKVTPQTDGSSSKVKVKVRVNIHGIFSVSSASLVEVHKSDENEEPMETDQHAKEEEKMQVDQEEQQKTEEQQQAQPENKGESEEMETSQADSKDKKVDQPPQAKKAKVKTTTVDLPIENQLVWQIGKDMLNLFIENEGKMIMQDKLEKERNDAKNAVEEYVYDMRDKLCGIYEKFVTEDDRNSFTLKLEDTENWLYEDGEDQPKQVYIDKLTELKTLGQPIQARFQESEERPKAFEDLGKQIQQYMKTVHAFKAKDEQYDHLDEADVAKVEKSANEAMEWMNNKLNLQNKRSLTLDPVIKAKDIQAKTKELTSICNPIVTKPKPKVELPKEEQKPPEPNGPVEGQGDGNSGSQTADEQSAAAAQAATEKKLPEMDID
SIO_010081: HSPA4
subclass of: SO_0000673
so part of: HSPA4
location: complement(join(1482934..1483140,1483387..1483548,1483930..1484049,1484151..1484258,1485222..1485347,1485847..1485999,1486511..1486600,1486911..1487092,1487557..1487690,1488013..1488119,1489097..1489248,1489545..1489621,1490014..1490258,1491988..1492121,1492500..1492599,1493054..1493176,1493796..1493936,1495552..1495609,1498889..1498995))
location: region:1482934-1498995:-1
so has part: feature:1498889-1498995:-1:exon
so has part: feature:1495552-1495609:-1:exon
so has part: feature:1493796-1493936:-1:exon
so has part: feature:1493054-1493176:-1:exon
so has part: feature:1492500-1492599:-1:exon
so has part: feature:1491988-1492121:-1:exon
so has part: feature:1490014-1490258:-1:exon
so has part: feature:1489545-1489621:-1:exon
so has part: feature:1489097-1489248:-1:exon
so has part: feature:1488013-1488119:-1:exon
so has part: feature:1487557-1487690:-1:exon
so has part: feature:1486911-1487092:-1:exon
so has part: feature:1486511-1486600:-1:exon
so has part: feature:1485847-1485999:-1:exon
so has part: feature:1485222-1485347:-1:exon
so has part: feature:1484151-1484258:-1:exon
so has part: feature:1483930-1484049:-1:exon
so has part: feature:1483387-1483548:-1:exon
so has part: feature:1482934-1483140:-1:exon

XP_040429094.1
type: Protein
SIO_000068: ncbiprotein

position:1482934:-1
position: 1482934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498995:-1
position: 1498995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498889-1498995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1495552-1495609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1493796-1493936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1493054-1493176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1492500-1492599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1491988-1492121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1490014-1490258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1489545-1489621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1489097-1489248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1488013-1488119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1487557-1487690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1486911-1487092:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1486511-1486600:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1485847-1485999:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1485222-1485347:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1484151-1484258:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1483930-1484049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1483387-1483548:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1482934-1483140:-1:exon

ZCCHC10
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1509103..1519284
location: region:1509103-1519284:1
so has part: feature:1509103-1519284:1:exon
subclass of: SO_0000010

121077886
type: Gene
SIO_000068: ncbigene

position:1509103:1
position: 1509103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519284:1
position: 1519284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509103-1519284:1:exon

ZCCHC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZCCHC10
product: zinc finger CCHC-type containing 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_040573505.1
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1509103..1509205,1511762..1511923,1513906..1513947,1517458..1519284)
location: region:1509103-1519284:1
so has part: feature:1509103-1509205:1:exon
so has part: feature:1511762-1511923:1:exon
so has part: feature:1513906-1513947:1:exon
so has part: feature:1517458-1519284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1509103-1509205:1:exon

position:1509205:1
position: 1509205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1511762-1511923:1:exon

position:1511762:1
position: 1511762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511923:1
position: 1511923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1513906-1513947:1:exon

position:1513906:1
position: 1513906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513947:1
position: 1513947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1517458-1519284:1:exon

position:1517458:1
position: 1517458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZCCHC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 10 isoform X2
translation: MQRGPARGPPADMATPMHRLIARRQAEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAQLAKVLKEKEKRLLLQQSAGESTAERKTKKKRSKSVTSSSSSSSVSSASDSSSDSEDSSTSSSDDDSDSDESSSTSSSSPSSSSTTSSSEFESDSSSSSSSSSSTDSSSDDEPPKKKKKK
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1509129..1509205,1511762..1511923,1513906..1513947,1517458..1517725)
location: region:1509129-1517725:1
so has part: feature:1509129-1509205:1:exon
so has part: feature:1511762-1511923:1:exon
so has part: feature:1513906-1513947:1:exon
so has part: feature:1517458-1517725:1:exon

XP_040429439.1
type: Protein
SIO_000068: ncbiprotein

position:1509129:1
position: 1509129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517725:1
position: 1517725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509129-1509205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511762-1511923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513906-1513947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517458-1517725:1:exon

ZCCHC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZCCHC10
product: zinc finger CCHC-type containing 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_040573504.1
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1509401..1509574,1511762..1511923,1513906..1513947,1517458..1519284)
location: region:1509401-1519284:1
so has part: feature:1509401-1509574:1:exon
so has part: feature:1511762-1511923:1:exon
so has part: feature:1513906-1513947:1:exon
so has part: feature:1517458-1519284:1:exon

position:1509401:1
position: 1509401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509401-1509574:1:exon

position:1509574:1
position: 1509574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1511762-1511923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513906-1513947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517458-1519284:1:exon

ZCCHC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 10 isoform X1
translation: MGRGKEAGALYSEMGSACQEFPRYRRDLISQQRNEEKPTLVEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAQLAKVLKEKEKRLLLQQSAGESTAERKTKKKRSKSVTSSSSSSSVSSASDSSSDSEDSSTSSSDDDSDSDESSSTSSSSPSSSSTTSSSEFESDSSSSSSSSSSTDSSSDDEPPKKKKKK
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1509453..1509574,1511762..1511923,1513906..1513947,1517458..1517725)
location: region:1509453-1517725:1
so has part: feature:1509453-1509574:1:exon
so has part: feature:1511762-1511923:1:exon
so has part: feature:1513906-1513947:1:exon
so has part: feature:1517458-1517725:1:exon

XP_040429438.1
type: Protein
SIO_000068: ncbiprotein

position:1509453:1
position: 1509453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509453-1509574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511762-1511923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513906-1513947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517458-1517725:1:exon

ZCCHC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZCCHC10
product: zinc finger CCHC-type containing 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_040573506.1
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1509460..1509626,1511762..1511923,1513906..1513947,1517458..1519284)
location: region:1509460-1519284:1
so has part: feature:1509460-1509626:1:exon
so has part: feature:1511762-1511923:1:exon
so has part: feature:1513906-1513947:1:exon
so has part: feature:1517458-1519284:1:exon

position:1509460:1
position: 1509460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509460-1509626:1:exon

position:1509626:1
position: 1509626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1511762-1511923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513906-1513947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517458-1519284:1:exon

ZCCHC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: ZCCHC10
product: zinc finger CCHC-type containing 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_040573507.1
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1509460..1509584,1511762..1511923,1513906..1513947,1517458..1519284)
location: region:1509460-1519284:1
so has part: feature:1509460-1509584:1:exon
so has part: feature:1511762-1511923:1:exon
so has part: feature:1513906-1513947:1:exon
so has part: feature:1517458-1519284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1509460-1509584:1:exon

position:1509584:1
position: 1509584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1511762-1511923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513906-1513947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517458-1519284:1:exon

ZCCHC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 10 isoform X3
translation: MLSTLNPCVPLSLFVEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAQLAKVLKEKEKRLLLQQSAGESTAERKTKKKRSKSVTSSSSSSSVSSASDSSSDSEDSSTSSSDDDSDSDESSSTSSSSPSSSSTTSSSEFESDSSSSSSSSSSTDSSSDDEPPKKKKKK
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1509583..1509626,1511762..1511923,1513906..1513947,1517458..1517725)
location: region:1509583-1517725:1
so has part: feature:1509583-1509626:1:exon
so has part: feature:1511762-1511923:1:exon
so has part: feature:1513906-1513947:1:exon
so has part: feature:1517458-1517725:1:exon

XP_040429440.1
type: Protein
SIO_000068: ncbiprotein

position:1509583:1
position: 1509583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509583-1509626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511762-1511923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513906-1513947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517458-1517725:1:exon

ZCCHC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 10 isoform X4
translation: MEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAQLAKVLKEKEKRLLLQQSAGESTAERKTKKKRSKSVTSSSSSSSVSSASDSSSDSEDSSTSSSDDDSDSDESSSTSSSSPSSSSTTSSSEFESDSSSSSSSSSSTDSSSDDEPPKKKKKK
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1509583..1509584,1511762..1511923,1513906..1513947,1517458..1517725)
location: region:1509583-1517725:1
so has part: feature:1509583-1509584:1:exon
so has part: feature:1511762-1511923:1:exon
so has part: feature:1513906-1513947:1:exon
so has part: feature:1517458-1517725:1:exon

XP_040429441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1509583-1509584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511762-1511923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513906-1513947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517458-1517725:1:exon

AFF4
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: AFF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1536112..1571608
location: region:1536112-1571608:1
so has part: feature:1536112-1571608:1:exon
subclass of: SO_0000010

121077785
type: Gene
SIO_000068: ncbigene

position:1536112:1
position: 1536112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571608:1
position: 1571608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536112-1571608:1:exon

AFF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: AFF4
product: AF4/FMR2 family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040573298.1
SIO_010081: AFF4
subclass of: SO_0000673
so part of: AFF4
location: join(1536112..1536257,1539231..1539357,1540651..1541442,1542783..1542827,1543805..1543891,1549160..1549196,1550709..1550778,1552645..1552699,1553731..1553768,1554135..1554295,1554839..1555758,1557211..1557299,1558817..1559054,1561139..1561236,1561877..1561940,1562087..1562223,1562639..1562710,1563907..1564000,1564526..1564569,1565509..1565729,1566263..1571608)
location: region:1536112-1571608:1
so has part: feature:1536112-1536257:1:exon
so has part: feature:1539231-1539357:1:exon
so has part: feature:1540651-1541442:1:exon
so has part: feature:1542783-1542827:1:exon
so has part: feature:1543805-1543891:1:exon
so has part: feature:1549160-1549196:1:exon
so has part: feature:1550709-1550778:1:exon
so has part: feature:1552645-1552699:1:exon
so has part: feature:1553731-1553768:1:exon
so has part: feature:1554135-1554295:1:exon
so has part: feature:1554839-1555758:1:exon
so has part: feature:1557211-1557299:1:exon
so has part: feature:1558817-1559054:1:exon
so has part: feature:1561139-1561236:1:exon
so has part: feature:1561877-1561940:1:exon
so has part: feature:1562087-1562223:1:exon
so has part: feature:1562639-1562710:1:exon
so has part: feature:1563907-1564000:1:exon
so has part: feature:1564526-1564569:1:exon
so has part: feature:1565509-1565729:1:exon
so has part: feature:1566263-1571608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1536112-1536257:1:exon

position:1536257:1
position: 1536257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1539231-1539357:1:exon

position:1539231:1
position: 1539231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539357:1
position: 1539357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1540651-1541442:1:exon

position:1540651:1
position: 1540651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541442:1
position: 1541442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1542783-1542827:1:exon

position:1542783:1
position: 1542783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1542827:1
position: 1542827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1543805-1543891:1:exon

position:1543805:1
position: 1543805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543891:1
position: 1543891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1549160-1549196:1:exon

position:1549160:1
position: 1549160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549196:1
position: 1549196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1550709-1550778:1:exon

position:1550709:1
position: 1550709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1550778:1
position: 1550778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1552645-1552699:1:exon

position:1552645:1
position: 1552645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552699:1
position: 1552699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1553731-1553768:1:exon

position:1553731:1
position: 1553731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553768:1
position: 1553768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1554135-1554295:1:exon

position:1554135:1
position: 1554135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554295:1
position: 1554295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1554839-1555758:1:exon

position:1554839:1
position: 1554839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555758:1
position: 1555758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1557211-1557299:1:exon

position:1557211:1
position: 1557211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557299:1
position: 1557299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1558817-1559054:1:exon

position:1558817:1
position: 1558817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559054:1
position: 1559054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1561139-1561236:1:exon

position:1561139:1
position: 1561139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561236:1
position: 1561236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1561877-1561940:1:exon

position:1561877:1
position: 1561877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561940:1
position: 1561940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1562087-1562223:1:exon

position:1562087:1
position: 1562087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562223:1
position: 1562223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1562639-1562710:1:exon

position:1562639:1
position: 1562639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562710:1
position: 1562710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1563907-1564000:1:exon

position:1563907:1
position: 1563907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564000:1
position: 1564000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1564526-1564569:1:exon

position:1564526:1
position: 1564526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564569:1
position: 1564569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1565509-1565729:1:exon

position:1565509:1
position: 1565509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565729:1
position: 1565729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1566263-1571608:1:exon

position:1566263:1
position: 1566263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AFF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: AFF4
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1550759..1550761,aa:OTHER)
product: LOW QUALITY PROTEIN: AF4/FMR2 family member 4
translation: MNREDRNVLRMKERERRNQEIQQGEEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMEDLIGDRSQQKLVGIPKPTVPSATDEKSNQSFFGDQRHNTSSHQSSKWTPVGPAPSTSSQSQKRSSGLQSGHSSQRGSGNNTSGSGQRHDRDSYSSSSGRKKSQHGSEHSKSRSSSPGKPPAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPSFSSGQHSNQSFPPSLMSKSNSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHSSSVNELKPSSKAHLTKLKIPSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGEQKRYNPSSKTSNGHQSKSXVAVEKTMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEPSQHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYADQSGSKDSISSTPGRDSKPTQKGSESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIPSNRHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENESLPPSSQTPKYSESNRTPVKSSMEEDDSFFRHRMFSPMEEKELLSPLSDPDERYPLIVKIDLSLLSRIPGKPYKDADAPKVEKKTVPEKHTRESQKQPSDKSSTKGKRKHKQNEDENRASDSKKTKLEEKAPSGHKTSSSRESLKPSAVKEKDLLPSPAAPVLQKDSKQEHGSRKRTVSQSSSLKSSSNVSKDSSGGSKSNSSSKQKKMEGKGSSSTKETKEKILNNSSNCPPVSAPSTESSKSRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQSLLYLRLFKLKKESALKYSKTLTEHLKNSYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSGSGSSVTIPQRIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLVFNSSIMTDLVRYTRQGLHWLRLDAK
SIO_010081: AFF4
subclass of: SO_0000673
so part of: AFF4
location: join(1539235..1539357,1540651..1541442,1542783..1542827,1543805..1543891,1549160..1549196,1550709..1550778,1552645..1552699,1553731..1553768,1554135..1554295,1554839..1555758,1557211..1557299,1558817..1559054,1561139..1561236,1561877..1561940,1562087..1562223,1562639..1562710,1563907..1564000,1564526..1564569,1565509..1565729,1566263..1566381)
location: region:1539235-1566381:1
so has part: feature:1539235-1539357:1:exon
so has part: feature:1540651-1541442:1:exon
so has part: feature:1542783-1542827:1:exon
so has part: feature:1543805-1543891:1:exon
so has part: feature:1549160-1549196:1:exon
so has part: feature:1550709-1550778:1:exon
so has part: feature:1552645-1552699:1:exon
so has part: feature:1553731-1553768:1:exon
so has part: feature:1554135-1554295:1:exon
so has part: feature:1554839-1555758:1:exon
so has part: feature:1557211-1557299:1:exon
so has part: feature:1558817-1559054:1:exon
so has part: feature:1561139-1561236:1:exon
so has part: feature:1561877-1561940:1:exon
so has part: feature:1562087-1562223:1:exon
so has part: feature:1562639-1562710:1:exon
so has part: feature:1563907-1564000:1:exon
so has part: feature:1564526-1564569:1:exon
so has part: feature:1565509-1565729:1:exon
so has part: feature:1566263-1566381:1:exon

XP_040429232.1
type: Protein
SIO_000068: ncbiprotein

position:1539235:1
position: 1539235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566381:1
position: 1566381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1539235-1539357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1540651-1541442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1542783-1542827:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1543805-1543891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1549160-1549196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1550709-1550778:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1552645-1552699:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1553731-1553768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1554135-1554295:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1554839-1555758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1557211-1557299:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1558817-1559054:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1561139-1561236:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1561877-1561940:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1562087-1562223:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1562639-1562710:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1563907-1564000:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1564526-1564569:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1565509-1565729:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1566263-1566381:1:exon

LEAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LEAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1571765..1574184)
location: region:1571765-1574184:-1
so has part: feature:1571765-1574184:-1:exon
subclass of: SO_0000010

121077783
type: Gene
SIO_000068: ncbigene

position:1571765:-1
position: 1571765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574184:-1
position: 1574184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571765-1574184:-1:exon

LEAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LEAP2
product: liver enriched antimicrobial peptide 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040573296.1
SIO_010081: LEAP2
subclass of: SO_0000673
so part of: LEAP2
location: complement(join(1571765..1572555,1573449..1573588,1574007..1574184))
location: region:1571765-1574184:-1
so has part: feature:1574007-1574184:-1:exon
so has part: feature:1573449-1573588:-1:exon
so has part: feature:1571765-1572555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1574007-1574184:-1:exon

position:1574007:-1
position: 1574007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1573449-1573588:-1:exon

position:1573449:-1
position: 1573449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573588:-1
position: 1573588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1571765-1572555:-1:exon

position:1572555:-1
position: 1572555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LEAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liver-expressed antimicrobial peptide 2
translation: MKSIKIWLKLGKFYSGLFQPPPPTAAPPAEAAAHTVKMHCLKVMAIFLFCSLLLSQMHCASLHQPQPHLKRQRRMTPFWRGVSLRPIGASCRDNSECITMLCRKNRCFLRSASE
SIO_010081: LEAP2
subclass of: SO_0000673
so part of: LEAP2
location: complement(join(1572519..1572555,1573449..1573588,1574007..1574174))
location: region:1572519-1574174:-1
so has part: feature:1574007-1574174:-1:exon
so has part: feature:1573449-1573588:-1:exon
so has part: feature:1572519-1572555:-1:exon

XP_040429230.1
type: Protein
SIO_000068: ncbiprotein

position:1572519:-1
position: 1572519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574174:-1
position: 1574174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1574007-1574174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1573449-1573588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1572519-1572555:-1:exon

LOC121077786
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1573474..1577995
location: region:1573474-1577995:1
so has part: feature:1573474-1577995:1:exon
subclass of: SO_0000011

121077786
type: Gene
SIO_000068: ncbigene

position:1573474:1
position: 1573474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577995:1
position: 1577995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573474-1577995:1:exon

LOC121077786
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 8869
nc RNA class: lncRNA
gene: LOC121077786
product: uncharacterized LOC121077786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005824310.1
SIO_010081: LOC121077786
subclass of: SO_0000673
so part of: LOC121077786
location: join(1573474..1573686,1575848..1575953,1577592..1577995)
location: region:1573474-1577995:1
so has part: feature:1573474-1573686:1:exon
so has part: feature:1575848-1575953:1:exon
so has part: feature:1577592-1577995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1573474-1573686:1:exon

position:1573686:1
position: 1573686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1575848-1575953:1:exon

position:1575848:1
position: 1575848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575953:1
position: 1575953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1577592-1577995:1:exon

position:1577592:1
position: 1577592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121077784
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: LOC121077784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1578117..1579459)
location: region:1578117-1579459:-1
so has part: feature:1578117-1579459:-1:exon
subclass of: SO_0000010

121077784
type: Gene
SIO_000068: ncbigene

position:1578117:-1
position: 1578117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579459:-1
position: 1579459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578117-1579459:-1:exon

LOC121077784
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: LOC121077784
product: cytochrome b-c1 complex subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_040573297.1
SIO_010081: LOC121077784
subclass of: SO_0000673
so part of: LOC121077784
location: complement(join(1578117..1578340,1579233..1579459))
location: region:1578117-1579459:-1
so has part: feature:1579233-1579459:-1:exon
so has part: feature:1578117-1578340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1579233-1579459:-1:exon

position:1579233:-1
position: 1579233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1578117-1578340:-1:exon

position:1578340:-1
position: 1578340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121077784
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: LOC121077784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit 8
translation: MGRHFGNLARVRHVVTYSLSPFEQRAFPNVLSHGLPNVWRRFSSQVFKVVPPFVGAYLLYSWGMQEFERLKRKNPADYENDK
SIO_010081: LOC121077784
subclass of: SO_0000673
so part of: LOC121077784
location: complement(join(1578246..1578340,1579233..1579386))
location: region:1578246-1579386:-1
so has part: feature:1579233-1579386:-1:exon
so has part: feature:1578246-1578340:-1:exon

XP_040429231.1
type: Protein
SIO_000068: ncbiprotein

position:1578246:-1
position: 1578246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579386:-1
position: 1579386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1579233-1579386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1578246-1578340:-1:exon

GDF9
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1581747..1585159)
location: region:1581747-1585159:-1
so has part: feature:1581747-1585159:-1:exon
subclass of: SO_0000010

121077989
type: Gene
SIO_000068: ncbigene

position:1581747:-1
position: 1581747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585159:-1
position: 1585159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581747-1585159:-1:exon

GDF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: GDF9
product: growth differentiation factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_040573681.1
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(1581747..1583136,1584664..1585159))
location: region:1581747-1585159:-1
so has part: feature:1584664-1585159:-1:exon
so has part: feature:1581747-1583136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1584664-1585159:-1:exon

position:1584664:-1
position: 1584664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1581747-1583136:-1:exon

position:1583136:-1
position: 1583136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 8869
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 9
translation: MEGTWRICVCFYCYIHWLSSSIQCSPRSRDSAVSDGISGLLVAPEEATSELNPLLRLPKGVRRGYALLPPLLKVLSDQGRQSWESEAPRLQPDSRALRYMKRLYKMSATKEGIPKANKSHLYNTVRLFTPCSECKHSHRDLMKGDLHSGDLLFNLDRVTALEHLLKSVLLYSFDTSVPTSSSFTCMCHLSVKEHDFSSQVCPSVSHTVAFSLHFEVRKRKWVEIDVTSFLQPLIATNRRNIHMAVNFTCLMGDPQHSTEQNSYINMALVPPSLLLYLNDTSEQAYHRWNSLRRRRKNPVRPRQRNSLLADITDDEGRENSQGKRASRRRRDENLNEAPATPPYNLSEYFKQFLFPQNECELHSFRLSFSQLKWDKWIIAPHRYSPQYCKGDCPRVVGHRYGSPVHTMVQNLIYEKLDSSVPKPSCVPAEYSPLSVLTIEPDGSIVYKEYEDMIATKCTCR
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(1582184..1583136,1584664..1585093))
location: region:1582184-1585093:-1
so has part: feature:1584664-1585093:-1:exon
so has part: feature:1582184-1583136:-1:exon

XP_040429615.1
type: Protein
SIO_000068: ncbiprotein

position:1582184:-1
position: 1582184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585093:-1
position: 1585093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1584664-1585093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1582184-1583136:-1:exon

SHROOM1
type: Gene
subclass of: SO_0000704
RO_0002162: 8869
gene: SHROOM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1592385..1622204
location: region:1592385-1622204:1
so has part: feature:1592385-1622204:1:exon
subclass of: SO_0000010

121078124
type: Gene
SIO_000068: ncbigene

position:1592385:1
position: 1592385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622204:1
position: 1622204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592385-1622204:1:exon

SHROOM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 8869
gene: SHROOM1
product: shroom family member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_040573939.1
SIO_010081: SHROOM1
subclass of: SO_0000673
so part of: SHROOM1
location: join(1592385..1592892,1610111..1610262,1610370..1610653,1612366..1615172,1616184..1616254,1616553..1616603,1616937..1617033,1618245..1618418,1619646..1619919,1621621..1622204)
location: region:1592385-1622204:1
so has part: feature:1592385-1592892:1:exon
so has part: feature:1610111-1610262:1:exon
so has part: feature:1610370-1610653:1:exon
so has part: feature:1612366-1615172:1:exon
so has part: feature:1616184-1616254:1:exon
so has part: feature:1616553-1616603:1:exon
so has part: feature:1616937-1617033:1:exon
so has part: feature:1618245-1618418:1:exon
so has part: feature:1619646-1619919:1:exon
so has part: feature:1621621-1622204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592385-1592892:1:exon

position:1592892:1
position: 1592892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1610111-1610262:1:exon

position:1610111:1
position: 1610111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610262:1
position: 1610262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1610370-1610653:1:exon

position:1610370:1
position: 1610370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610653:1
position: 1610653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1612366-1615172:1:exon

position:1612366:1
position: 1612366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615172:1
position: 1615172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1616184-1616254:1:exon

position:1616184:1
position: 1616184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616254:1
position: 1616254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1616553-1616603:1:exon

position:1616553:1
position: 1616553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616603:1
position: 1616603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1616937-1617033:1:exon

position:1616937:1
position: 1616937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617033:1
position: 1617033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1618245-1618418:1:exon

position:1618245:1
position: 1618245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition